HEADER TRANSFERASE/TRANSFERASE INHIBITOR 24-OCT-12 4HPU TITLE CRYSTAL STRUCTURE OF THE CATALYTIC SUBUNIT OF CAMP-DEPENDENT PROTEIN TITLE 2 KINASE DISPLAYING PARTIAL PHOSPHORYL TRANSFER OF AMP-PNP ONTO A TITLE 3 SUBSTRATE PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT ALPHA; COMPND 3 CHAIN: E; COMPND 4 SYNONYM: PKA C-ALPHA; COMPND 5 EC: 2.7.11.11; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE INHIBITOR ALPHA; COMPND 9 CHAIN: I; COMPND 10 FRAGMENT: SP20 PEPTIDE DERIVED FROM CAMP-DEPENDENT PROTEIN KINASE COMPND 11 INHIBITOR ALPHA (UNP RESIDUES 6-25); COMPND 12 SYNONYM: PKI-ALPHA, CAMP-DEPENDENT PROTEIN KINASE INHIBITOR, COMPND 13 MUSCLE/BRAIN ISOFORM; COMPND 14 ENGINEERED: YES; COMPND 15 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: PRKACA, PKACA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 11 ORGANISM_COMMON: MOUSE; SOURCE 12 ORGANISM_TAXID: 10090; SOURCE 13 OTHER_DETAILS: SYNTHETIC PEPTIDE KEYWDS PROTEIN KINASE FOLD, PHOSPHOTRANSFERASE, REGULATORY SUBUNITS, PKI, KEYWDS 2 MAGNESIUM, PHOSPHORYLATION, TRANSFERASE-TRANSFERASE INHIBITOR KEYWDS 3 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.C.BASTIDAS,J.M.STEICHEN,J.WU,S.S.TAYLOR REVDAT 6 06-NOV-24 4HPU 1 REMARK SEQADV LINK REVDAT 5 15-NOV-17 4HPU 1 REMARK REVDAT 4 10-APR-13 4HPU 1 JRNL REVDAT 3 03-APR-13 4HPU 1 REMARK REVDAT 2 27-MAR-13 4HPU 1 JRNL REVDAT 1 20-MAR-13 4HPU 0 JRNL AUTH A.C.BASTIDAS,M.S.DEAL,J.M.STEICHEN,Y.GUO,J.WU,S.S.TAYLOR JRNL TITL PHOSPHORYL TRANSFER BY PROTEIN KINASE A IS CAPTURED IN A JRNL TITL 2 CRYSTAL LATTICE. JRNL REF J.AM.CHEM.SOC. V. 135 4788 2013 JRNL REFN ISSN 0002-7863 JRNL PMID 23458248 JRNL DOI 10.1021/JA312237Q REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0110 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 61.91 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 62785 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.194 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3357 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.59 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4566 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.87 REMARK 3 BIN R VALUE (WORKING SET) : 0.2460 REMARK 3 BIN FREE R VALUE SET COUNT : 248 REMARK 3 BIN FREE R VALUE : 0.2580 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2936 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 70 REMARK 3 SOLVENT ATOMS : 432 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.57000 REMARK 3 B22 (A**2) : -0.53000 REMARK 3 B33 (A**2) : -0.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.072 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.072 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.042 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.523 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.949 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3138 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4266 ; 1.329 ; 1.985 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 378 ; 5.394 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 151 ;35.373 ;23.974 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 552 ;13.293 ;15.082 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;17.404 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 450 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2349 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1815 ; 0.666 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2937 ; 1.253 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1323 ; 1.860 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1319 ; 3.011 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 12 E 350 REMARK 3 RESIDUE RANGE : E 402 E 402 REMARK 3 RESIDUE RANGE : I 600 I 600 REMARK 3 ORIGIN FOR THE GROUP (A): -9.0944 13.3922 -20.9222 REMARK 3 T TENSOR REMARK 3 T11: 0.0112 T22: 0.0083 REMARK 3 T33: 0.0164 T12: -0.0022 REMARK 3 T13: -0.0002 T23: 0.0023 REMARK 3 L TENSOR REMARK 3 L11: 0.0608 L22: 0.2169 REMARK 3 L33: 0.4220 L12: -0.0185 REMARK 3 L13: -0.0482 L23: 0.1696 REMARK 3 S TENSOR REMARK 3 S11: -0.0140 S12: -0.0095 S13: -0.0136 REMARK 3 S21: -0.0270 S22: 0.0002 S23: 0.0304 REMARK 3 S31: -0.0139 S32: 0.0076 S33: 0.0138 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : I 5 I 23 REMARK 3 ORIGIN FOR THE GROUP (A): 3.8220 1.3754 -26.3031 REMARK 3 T TENSOR REMARK 3 T11: 0.0214 T22: 0.0170 REMARK 3 T33: 0.0176 T12: 0.0129 REMARK 3 T13: 0.0008 T23: -0.0029 REMARK 3 L TENSOR REMARK 3 L11: 0.3179 L22: 1.9079 REMARK 3 L33: 1.4195 L12: -0.7723 REMARK 3 L13: -0.5888 L23: 1.2815 REMARK 3 S TENSOR REMARK 3 S11: -0.0156 S12: -0.0234 S13: 0.0277 REMARK 3 S21: 0.0139 S22: 0.0328 S23: -0.0912 REMARK 3 S31: 0.0516 S32: 0.0328 S33: -0.0173 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 501 E 882 REMARK 3 RESIDUE RANGE : I 701 I 750 REMARK 3 ORIGIN FOR THE GROUP (A): -7.5788 12.4899 -19.0227 REMARK 3 T TENSOR REMARK 3 T11: 0.0037 T22: 0.0103 REMARK 3 T33: 0.0115 T12: 0.0016 REMARK 3 T13: 0.0016 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 0.0935 L22: 0.2012 REMARK 3 L33: 0.5454 L12: -0.0085 REMARK 3 L13: -0.0403 L23: 0.1815 REMARK 3 S TENSOR REMARK 3 S11: -0.0079 S12: -0.0140 S13: -0.0111 REMARK 3 S21: -0.0237 S22: -0.0103 S23: 0.0178 REMARK 3 S31: -0.0136 S32: 0.0309 S33: 0.0183 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 403 E 403 REMARK 3 ORIGIN FOR THE GROUP (A): -2.5470 13.8146 -15.7667 REMARK 3 T TENSOR REMARK 3 T11: 0.0131 T22: 0.0374 REMARK 3 T33: 0.0620 T12: 0.0195 REMARK 3 T13: 0.0292 T23: 0.0517 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.0000 REMARK 3 L33: 0.0000 L12: 0.0000 REMARK 3 L13: 0.0000 L23: 0.0000 REMARK 3 S TENSOR REMARK 3 S11: 0.0000 S12: 0.0000 S13: 0.0000 REMARK 3 S21: 0.0000 S22: 0.0000 S23: 0.0000 REMARK 3 S31: 0.0000 S32: 0.0000 S33: 0.0000 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 404 E 404 REMARK 3 ORIGIN FOR THE GROUP (A): -3.7320 10.2267 -16.8168 REMARK 3 T TENSOR REMARK 3 T11: 0.0618 T22: 0.0119 REMARK 3 T33: 0.0145 T12: 0.0108 REMARK 3 T13: 0.0275 T23: 0.0120 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.0000 REMARK 3 L33: 0.0000 L12: 0.0000 REMARK 3 L13: 0.0000 L23: 0.0000 REMARK 3 S TENSOR REMARK 3 S11: 0.0000 S12: 0.0000 S13: 0.0000 REMARK 3 S21: 0.0000 S22: 0.0000 S23: 0.0000 REMARK 3 S31: 0.0000 S32: 0.0000 S33: 0.0000 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4HPU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-OCT-12. REMARK 100 THE DEPOSITION ID IS D_1000075769. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66294 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 61.910 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.44600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLECULAR REPLACEMENT REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM BICINE, 150 MM AMMONIUM ACETATE, REMARK 280 10 MM DTT, ~7-10 MG/ML PROTEIN WELL SOLUTION: 2% MPD IN A 1 ML REMARK 280 WELL. 80 UL OF METHANOL WAS ADDED TO THE WELL IMMEDIATELY BEFORE REMARK 280 SEALING. DROP WAS 8 UL OF 1:1 PROTEIN:WELL, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 277.15K, PH 8.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.84500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.07000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.90000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.07000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.84500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.90000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY E 1 REMARK 465 ASN E 2 REMARK 465 ALA E 3 REMARK 465 ALA E 4 REMARK 465 ALA E 5 REMARK 465 ALA E 6 REMARK 465 LYS E 7 REMARK 465 LYS E 8 REMARK 465 GLY E 9 REMARK 465 SER E 10 REMARK 465 GLU E 11 REMARK 465 ASP I 24 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN E 12 CG CD OE1 NE2 REMARK 470 GLU E 13 CG CD OE1 OE2 REMARK 470 SER E 14 OG REMARK 470 PHE E 318 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS E 319 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU E 121 O HOH E 598 1.99 REMARK 500 OG SER E 259 O HOH E 641 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP E 166 45.50 -147.24 REMARK 500 ASP E 184 78.80 63.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 MYR E 401 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG E 404 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN E 171 OD1 REMARK 620 2 ASP E 184 OD2 90.6 REMARK 620 3 ANP E 402 O2A 88.6 84.8 REMARK 620 4 ANP E 402 N3B 167.3 88.5 78.7 REMARK 620 5 HOH E 596 O 82.3 172.2 91.9 97.8 REMARK 620 6 ANP I 600 O2G 111.0 90.7 159.9 81.6 94.8 REMARK 620 7 ANP I 600 O2A 96.5 89.6 9.2 70.9 88.1 152.5 REMARK 620 8 ANP I 600 N3B 177.9 90.9 93.0 14.4 96.3 67.5 85.1 REMARK 620 9 HOH I 747 O 99.2 68.9 152.4 92.3 115.3 24.5 153.3 80.0 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG E 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP E 184 OD2 REMARK 620 2 ASP E 184 OD1 57.9 REMARK 620 3 ANP E 402 O1B 87.9 85.8 REMARK 620 4 HOH E 595 O 84.7 85.3 170.5 REMARK 620 5 SEP I 21 O1P 94.8 152.1 100.0 86.5 REMARK 620 6 ANP I 600 O1B 83.9 88.8 7.3 168.6 94.3 REMARK 620 7 ANP I 600 O3G 88.5 146.3 93.6 92.1 8.9 87.4 REMARK 620 8 HOH I 714 O 158.3 100.5 93.1 91.6 106.4 99.1 113.1 REMARK 620 N 1 2 3 4 5 6 7 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MYR E 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ANP E 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG E 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG E 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ANP I 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN I OF CAMP-DEPENDENT REMARK 800 PROTEIN KINASE INHIBITOR ALPHA REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4HPT RELATED DB: PDB REMARK 900 SAME COMPLEX DISPLAYING COMPLETE PHOSPHORYL TRANSFER DBREF 4HPU E 1 350 UNP P05132 KAPCA_MOUSE 2 351 DBREF 4HPU I 5 24 UNP P63248 IPKA_MOUSE 6 25 SEQADV 4HPU ALA I 20 UNP P63248 ASN 21 ENGINEERED MUTATION SEQADV 4HPU SEP I 21 UNP P63248 ALA 22 ENGINEERED MUTATION SEQRES 1 E 350 GLY ASN ALA ALA ALA ALA LYS LYS GLY SER GLU GLN GLU SEQRES 2 E 350 SER VAL LYS GLU PHE LEU ALA LYS ALA LYS GLU ASP PHE SEQRES 3 E 350 LEU LYS LYS TRP GLU THR PRO SER GLN ASN THR ALA GLN SEQRES 4 E 350 LEU ASP GLN PHE ASP ARG ILE LYS THR LEU GLY THR GLY SEQRES 5 E 350 SER PHE GLY ARG VAL MET LEU VAL LYS HIS LYS GLU SER SEQRES 6 E 350 GLY ASN HIS TYR ALA MET LYS ILE LEU ASP LYS GLN LYS SEQRES 7 E 350 VAL VAL LYS LEU LYS GLN ILE GLU HIS THR LEU ASN GLU SEQRES 8 E 350 LYS ARG ILE LEU GLN ALA VAL ASN PHE PRO PHE LEU VAL SEQRES 9 E 350 LYS LEU GLU PHE SER PHE LYS ASP ASN SER ASN LEU TYR SEQRES 10 E 350 MET VAL MET GLU TYR VAL ALA GLY GLY GLU MET PHE SER SEQRES 11 E 350 HIS LEU ARG ARG ILE GLY ARG PHE SEP GLU PRO HIS ALA SEQRES 12 E 350 ARG PHE TYR ALA ALA GLN ILE VAL LEU THR PHE GLU TYR SEQRES 13 E 350 LEU HIS SER LEU ASP LEU ILE TYR ARG ASP LEU LYS PRO SEQRES 14 E 350 GLU ASN LEU LEU ILE ASP GLN GLN GLY TYR ILE GLN VAL SEQRES 15 E 350 THR ASP PHE GLY PHE ALA LYS ARG VAL LYS GLY ARG THR SEQRES 16 E 350 TRP TPO LEU CYS GLY THR PRO GLU TYR LEU ALA PRO GLU SEQRES 17 E 350 ILE ILE LEU SER LYS GLY TYR ASN LYS ALA VAL ASP TRP SEQRES 18 E 350 TRP ALA LEU GLY VAL LEU ILE TYR GLU MET ALA ALA GLY SEQRES 19 E 350 TYR PRO PRO PHE PHE ALA ASP GLN PRO ILE GLN ILE TYR SEQRES 20 E 350 GLU LYS ILE VAL SER GLY LYS VAL ARG PHE PRO SER HIS SEQRES 21 E 350 PHE SER SER ASP LEU LYS ASP LEU LEU ARG ASN LEU LEU SEQRES 22 E 350 GLN VAL ASP LEU THR LYS ARG PHE GLY ASN LEU LYS ASN SEQRES 23 E 350 GLY VAL ASN ASP ILE LYS ASN HIS LYS TRP PHE ALA THR SEQRES 24 E 350 THR ASP TRP ILE ALA ILE TYR GLN ARG LYS VAL GLU ALA SEQRES 25 E 350 PRO PHE ILE PRO LYS PHE LYS GLY PRO GLY ASP THR SER SEQRES 26 E 350 ASN PHE ASP ASP TYR GLU GLU GLU GLU ILE ARG VAL SEP SEQRES 27 E 350 ILE ASN GLU LYS CYS GLY LYS GLU PHE THR GLU PHE SEQRES 1 I 20 THR THR TYR ALA ASP PHE ILE ALA SER GLY ARG THR GLY SEQRES 2 I 20 ARG ARG ALA SEP ILE HIS ASP MODRES 4HPU SEP E 139 SER PHOSPHOSERINE MODRES 4HPU TPO E 197 THR PHOSPHOTHREONINE MODRES 4HPU SEP E 338 SER PHOSPHOSERINE MODRES 4HPU SEP I 21 SER PHOSPHOSERINE HET SEP E 139 10 HET TPO E 197 11 HET SEP E 338 10 HET SEP I 21 10 HET MYR E 401 10 HET ANP E 402 27 HET MG E 403 1 HET MG E 404 1 HET ANP I 600 31 HETNAM SEP PHOSPHOSERINE HETNAM TPO PHOSPHOTHREONINE HETNAM MYR MYRISTIC ACID HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER HETNAM MG MAGNESIUM ION HETSYN SEP PHOSPHONOSERINE HETSYN TPO PHOSPHONOTHREONINE FORMUL 1 SEP 3(C3 H8 N O6 P) FORMUL 1 TPO C4 H10 N O6 P FORMUL 3 MYR C14 H28 O2 FORMUL 4 ANP 2(C10 H17 N6 O12 P3) FORMUL 5 MG 2(MG 2+) FORMUL 8 HOH *432(H2 O) HELIX 1 1 GLN E 12 THR E 32 1 21 HELIX 2 2 GLN E 39 ASP E 41 5 3 HELIX 3 3 LYS E 76 LEU E 82 1 7 HELIX 4 4 GLN E 84 GLN E 96 1 13 HELIX 5 5 GLU E 127 GLY E 136 1 10 HELIX 6 6 SEP E 139 LEU E 160 1 22 HELIX 7 7 LYS E 168 GLU E 170 5 3 HELIX 8 8 THR E 201 LEU E 205 5 5 HELIX 9 9 ALA E 206 LEU E 211 1 6 HELIX 10 10 LYS E 217 GLY E 234 1 18 HELIX 11 11 GLN E 242 GLY E 253 1 12 HELIX 12 12 SER E 262 LEU E 273 1 12 HELIX 13 13 VAL E 288 ASN E 293 1 6 HELIX 14 14 HIS E 294 ALA E 298 5 5 HELIX 15 15 ASP E 301 GLN E 307 1 7 HELIX 16 16 THR I 6 ALA I 12 1 7 SHEET 1 A 5 PHE E 43 THR E 51 0 SHEET 2 A 5 GLY E 55 HIS E 62 -1 O LEU E 59 N LYS E 47 SHEET 3 A 5 HIS E 68 ASP E 75 -1 O MET E 71 N MET E 58 SHEET 4 A 5 ASN E 115 GLU E 121 -1 O MET E 118 N LYS E 72 SHEET 5 A 5 LEU E 106 LYS E 111 -1 N PHE E 108 O VAL E 119 SHEET 1 B 2 LEU E 162 ILE E 163 0 SHEET 2 B 2 LYS E 189 ARG E 190 -1 O LYS E 189 N ILE E 163 SHEET 1 C 2 LEU E 172 ILE E 174 0 SHEET 2 C 2 ILE E 180 VAL E 182 -1 O GLN E 181 N LEU E 173 LINK C PHE E 138 N SEP E 139 1555 1555 1.33 LINK C SEP E 139 N GLU E 140 1555 1555 1.33 LINK C TRP E 196 N TPO E 197 1555 1555 1.34 LINK C TPO E 197 N LEU E 198 1555 1555 1.33 LINK C VAL E 337 N SEP E 338 1555 1555 1.32 LINK C SEP E 338 N ILE E 339 1555 1555 1.33 LINK C ALA I 20 N SEP I 21 1555 1555 1.32 LINK C SEP I 21 N ILE I 22 1555 1555 1.33 LINK OD1 ASN E 171 MG MG E 404 1555 1555 2.20 LINK OD2 ASP E 184 MG MG E 403 1555 1555 2.26 LINK OD1 ASP E 184 MG MG E 403 1555 1555 2.28 LINK OD2 ASP E 184 MG MG E 404 1555 1555 2.24 LINK O1BAANP E 402 MG MG E 403 1555 1555 2.15 LINK O2AAANP E 402 MG MG E 404 1555 1555 2.13 LINK N3BAANP E 402 MG MG E 404 1555 1555 2.33 LINK MG MG E 403 O HOH E 595 1555 1555 2.15 LINK MG MG E 403 O1P SEP I 21 1555 1555 1.96 LINK MG MG E 403 O1BBANP I 600 1555 1555 1.97 LINK MG MG E 403 O3GBANP I 600 1555 1555 2.11 LINK MG MG E 403 O HOH I 714 1555 1555 1.83 LINK MG MG E 404 O HOH E 596 1555 1555 2.14 LINK MG MG E 404 O2GBANP I 600 1555 1555 1.77 LINK MG MG E 404 O2ABANP I 600 1555 1555 2.02 LINK MG MG E 404 N3BBANP I 600 1555 1555 2.55 LINK MG MG E 404 O HOH I 747 1555 1555 2.49 SITE 1 AC1 2 LEU E 152 GLU E 155 SITE 1 AC2 23 VAL E 57 ALA E 70 LYS E 72 VAL E 104 SITE 2 AC2 23 MET E 120 GLU E 121 TYR E 122 VAL E 123 SITE 3 AC2 23 GLU E 127 GLU E 170 ASN E 171 LEU E 173 SITE 4 AC2 23 THR E 183 ASP E 184 PHE E 327 MG E 403 SITE 5 AC2 23 MG E 404 HOH E 521 HOH E 596 HOH E 740 SITE 6 AC2 23 ARG I 18 SEP I 21 HOH I 714 SITE 1 AC3 6 ASP E 184 ANP E 402 HOH E 595 SEP I 21 SITE 2 AC3 6 ANP I 600 HOH I 714 SITE 1 AC4 6 ASN E 171 ASP E 184 ANP E 402 HOH E 596 SITE 2 AC4 6 ANP I 600 HOH I 747 SITE 1 AC5 31 LEU E 49 GLY E 50 GLY E 52 VAL E 57 SITE 2 AC5 31 ALA E 70 LYS E 72 VAL E 104 MET E 120 SITE 3 AC5 31 GLU E 121 VAL E 123 GLU E 127 LYS E 168 SITE 4 AC5 31 GLU E 170 ASN E 171 LEU E 173 THR E 183 SITE 5 AC5 31 ASP E 184 PHE E 327 MG E 403 MG E 404 SITE 6 AC5 31 HOH E 521 HOH E 595 HOH E 596 ARG I 18 SITE 7 AC5 31 ALA I 20 SEP I 21 HOH I 702 HOH I 714 SITE 8 AC5 31 HOH I 729 HOH I 747 HOH I 750 SITE 1 AC6 77 THR E 51 SER E 53 LEU E 82 GLN E 84 SITE 2 AC6 77 GLU E 86 LEU E 89 ARG E 93 GLU E 127 SITE 3 AC6 77 PHE E 129 ARG E 133 LYS E 168 PRO E 169 SITE 4 AC6 77 GLU E 170 ASP E 184 PHE E 187 LYS E 189 SITE 5 AC6 77 ARG E 190 VAL E 191 LYS E 192 LEU E 198 SITE 6 AC6 77 CYS E 199 GLY E 200 THR E 201 GLU E 203 SITE 7 AC6 77 GLU E 230 TYR E 235 PRO E 236 PHE E 239 SITE 8 AC6 77 ALA E 240 ASP E 241 ILE E 246 TYR E 330 SITE 9 AC6 77 GLU E 349 ANP E 402 MG E 403 HOH E 514 SITE 10 AC6 77 HOH E 518 HOH E 592 HOH E 595 HOH E 728 SITE 11 AC6 77 HOH E 882 ANP I 600 HOH I 701 HOH I 703 SITE 12 AC6 77 HOH I 704 HOH I 705 HOH I 706 HOH I 707 SITE 13 AC6 77 HOH I 708 HOH I 709 HOH I 710 HOH I 711 SITE 14 AC6 77 HOH I 712 HOH I 713 HOH I 714 HOH I 715 SITE 15 AC6 77 HOH I 716 HOH I 717 HOH I 718 HOH I 719 SITE 16 AC6 77 HOH I 720 HOH I 721 HOH I 723 HOH I 726 SITE 17 AC6 77 HOH I 729 HOH I 731 HOH I 732 HOH I 735 SITE 18 AC6 77 HOH I 737 HOH I 740 HOH I 742 HOH I 744 SITE 19 AC6 77 HOH I 746 HOH I 747 HOH I 748 HOH I 749 SITE 20 AC6 77 HOH I 750 CRYST1 57.690 79.800 98.140 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017334 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012531 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010190 0.00000