HEADER TRANSFERASE/DE NOVO PROTEIN 28-OCT-12 4HRN TITLE STRUCTURAL BASIS FOR ELICITING A CYTOTOXIC EFFECT IN HER2- TITLE 2 OVEREXPRESSING CANCER CELLS VIA BINDING TO THE EXTRACELLULAR DOMAIN TITLE 3 OF HER2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DESIGNED ANKYRIN REPEAT PROTEIN H10-2-G; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: RECEPTOR TYROSINE-PROTEIN KINASE ERBB-2; COMPND 7 CHAIN: C, D; COMPND 8 FRAGMENT: DOMAIN IV, UNP RESIDUES 529-625; COMPND 9 SYNONYM: METASTATIC LYMPH NODE GENE 19 PROTEIN, MLN 19, PROTO- COMPND 10 ONCOGENE NEU, PROTO-ONCOGENE C-ERBB-2, TYROSINE KINASE-TYPE CELL COMPND 11 SURFACE RECEPTOR HER2, P185ERBB2; COMPND 12 EC: 2.7.10.1; COMPND 13 ENGINEERED: YES; COMPND 14 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: XL1-BLUE; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PQE30; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: ERBB2, HER2, MLN19, NEU, NGL; SOURCE 14 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 15 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 17 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 19 EXPRESSION_SYSTEM_PLASMID: PFL KEYWDS TRANSFERASE-DE NOVO PROTEIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.JOST,J.SCHILLING,A.PLUECKTHUN REVDAT 3 08-NOV-23 4HRN 1 SEQADV REVDAT 2 30-OCT-13 4HRN 1 TITLE REVDAT 1 16-OCT-13 4HRN 0 JRNL AUTH C.JOST,J.SCHILLING,R.TAMASKOVIC,M.SCHWILL,A.HONEGGER, JRNL AUTH 2 A.PLUECKTHUN JRNL TITL STRUCTURAL BASIS FOR ELICITING A CYTOTOXIC EFFECT IN JRNL TITL 2 HER2-OVEREXPRESSING CANCER CELLS VIA BINDING TO THE JRNL TITL 3 EXTRACELLULAR DOMAIN OF HER2. JRNL REF STRUCTURE V. 21 1 2013 JRNL REFN ISSN 0969-2126 JRNL PMID 24095059 JRNL DOI 10.1016/J.STR.2013.08.020 REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8_1069 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.75 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 23756 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 1218 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.670 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 64.81 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4HRN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-NOV-12. REMARK 100 THE DEPOSITION ID IS D_1000075834. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-AUG-12 REMARK 200 TEMPERATURE (KELVIN) : 90 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23767 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650 REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.04100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.4200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.51100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.540 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.3.0 REMARK 200 STARTING MODEL: 1N8Z, 2JAB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05M SUCCINIC ACID, 29% AMMONIUM REMARK 280 SULFATE, PH 4.0, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 97.50000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 56.29165 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 37.33333 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 97.50000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 56.29165 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 37.33333 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 97.50000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 56.29165 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 37.33333 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 97.50000 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 56.29165 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 37.33333 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 97.50000 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 56.29165 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 37.33333 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 97.50000 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 56.29165 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 37.33333 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 112.58330 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 74.66667 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 112.58330 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 74.66667 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 112.58330 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 74.66667 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 112.58330 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 74.66667 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 112.58330 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 74.66667 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 112.58330 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 74.66667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 GLY A 3 REMARK 465 SER A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 GLY A 11 REMARK 465 SER A 12 REMARK 465 LYS A 134 REMARK 465 LEU A 135 REMARK 465 ASN A 136 REMARK 465 MET B 1 REMARK 465 ARG B 2 REMARK 465 GLY B 3 REMARK 465 SER B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 HIS B 9 REMARK 465 HIS B 10 REMARK 465 GLY B 11 REMARK 465 SER B 12 REMARK 465 ASN B 136 REMARK 465 HIS C 1 REMARK 465 HIS C 2 REMARK 465 HIS C 3 REMARK 465 HIS C 4 REMARK 465 HIS C 5 REMARK 465 HIS C 6 REMARK 465 VAL C 7 REMARK 465 ASP C 8 REMARK 465 SER C 80 REMARK 465 GLY C 81 REMARK 465 VAL C 82 REMARK 465 LYS C 83 REMARK 465 PRO C 84 REMARK 465 ASP C 85 REMARK 465 LEU C 86 REMARK 465 SER C 87 REMARK 465 TYR C 88 REMARK 465 MET C 89 REMARK 465 PRO C 90 REMARK 465 ILE C 91 REMARK 465 TRP C 92 REMARK 465 LYS C 93 REMARK 465 PHE C 94 REMARK 465 PRO C 95 REMARK 465 ASP C 96 REMARK 465 GLU C 97 REMARK 465 GLU C 98 REMARK 465 GLY C 99 REMARK 465 ALA C 100 REMARK 465 CYS C 101 REMARK 465 GLN C 102 REMARK 465 PRO C 103 REMARK 465 HIS D 1 REMARK 465 HIS D 2 REMARK 465 HIS D 3 REMARK 465 HIS D 4 REMARK 465 HIS D 5 REMARK 465 HIS D 6 REMARK 465 VAL D 7 REMARK 465 ASP D 8 REMARK 465 PRO D 79 REMARK 465 SER D 80 REMARK 465 GLY D 81 REMARK 465 VAL D 82 REMARK 465 LYS D 83 REMARK 465 PRO D 84 REMARK 465 ASP D 85 REMARK 465 LEU D 86 REMARK 465 SER D 87 REMARK 465 TYR D 88 REMARK 465 MET D 89 REMARK 465 PRO D 90 REMARK 465 ILE D 91 REMARK 465 TRP D 92 REMARK 465 LYS D 93 REMARK 465 PHE D 94 REMARK 465 PRO D 95 REMARK 465 ASP D 96 REMARK 465 GLU D 97 REMARK 465 GLU D 98 REMARK 465 GLY D 99 REMARK 465 ALA D 100 REMARK 465 CYS D 101 REMARK 465 GLN D 102 REMARK 465 PRO D 103 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 13 CG OD1 OD2 REMARK 470 LYS A 16 CG CD CE NZ REMARK 470 LYS A 17 CG CD CE NZ REMARK 470 LYS A 68 CG CD CE NZ REMARK 470 LYS A 101 CG CD CE NZ REMARK 470 LYS A 111 CG CD CE NZ REMARK 470 GLN A 133 CG CD OE1 NE2 REMARK 470 ASP B 13 CG OD1 OD2 REMARK 470 LYS B 16 CG CD CE NZ REMARK 470 LYS B 17 CG CD CE NZ REMARK 470 GLU B 20 CG CD OE1 OE2 REMARK 470 ARG B 31 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 61 CG CD OE1 OE2 REMARK 470 LYS B 68 CG CD CE NZ REMARK 470 LYS B 101 CG CD CE NZ REMARK 470 GLN B 133 CG CD OE1 NE2 REMARK 470 LYS B 134 CG CD CE NZ REMARK 470 SER C 10 OG REMARK 470 GLU C 17 CG CD OE1 OE2 REMARK 470 GLU C 20 CG CD OE1 OE2 REMARK 470 ARG C 36 CG CD NE CZ NH1 NH2 REMARK 470 SER D 10 OG REMARK 470 GLN D 11 CG CD OE1 NE2 REMARK 470 GLU D 17 CG CD OE1 OE2 REMARK 470 GLU D 20 CG CD OE1 OE2 REMARK 470 LYS D 69 CG CD CE NZ REMARK 470 ARG D 77 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 111 26.69 -65.18 REMARK 500 LYS B 134 21.14 -66.72 REMARK 500 GLN C 11 -128.56 -102.07 REMARK 500 ARG C 36 10.47 55.95 REMARK 500 HIS C 67 -96.28 -135.42 REMARK 500 PRO C 71 130.30 -33.14 REMARK 500 GLN D 11 -111.12 -97.19 REMARK 500 ALA D 35 52.07 36.89 REMARK 500 HIS D 67 -107.14 -139.74 REMARK 500 ASP D 70 70.99 -169.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4HRL RELATED DB: PDB REMARK 900 RELATED ID: 4HRM RELATED DB: PDB REMARK 900 RELATED ID: 1N8Z RELATED DB: PDB REMARK 900 RELATED ID: 1S78 RELATED DB: PDB REMARK 900 RELATED ID: 3H3B RELATED DB: PDB REMARK 900 RELATED ID: 2JAB RELATED DB: PDB DBREF 4HRN C 7 103 UNP P04626 ERBB2_HUMAN 529 625 DBREF 4HRN D 7 103 UNP P04626 ERBB2_HUMAN 529 625 DBREF 4HRN A 1 136 PDB 4HRN 4HRN 1 136 DBREF 4HRN B 1 136 PDB 4HRN 4HRN 1 136 SEQADV 4HRN HIS C 1 UNP P04626 EXPRESSION TAG SEQADV 4HRN HIS C 2 UNP P04626 EXPRESSION TAG SEQADV 4HRN HIS C 3 UNP P04626 EXPRESSION TAG SEQADV 4HRN HIS C 4 UNP P04626 EXPRESSION TAG SEQADV 4HRN HIS C 5 UNP P04626 EXPRESSION TAG SEQADV 4HRN HIS C 6 UNP P04626 EXPRESSION TAG SEQADV 4HRN ASP C 8 UNP P04626 ASN 530 ENGINEERED MUTATION SEQADV 4HRN ASP C 49 UNP P04626 ASN 571 ENGINEERED MUTATION SEQADV 4HRN HIS D 1 UNP P04626 EXPRESSION TAG SEQADV 4HRN HIS D 2 UNP P04626 EXPRESSION TAG SEQADV 4HRN HIS D 3 UNP P04626 EXPRESSION TAG SEQADV 4HRN HIS D 4 UNP P04626 EXPRESSION TAG SEQADV 4HRN HIS D 5 UNP P04626 EXPRESSION TAG SEQADV 4HRN HIS D 6 UNP P04626 EXPRESSION TAG SEQADV 4HRN ASP D 8 UNP P04626 ASN 530 ENGINEERED MUTATION SEQADV 4HRN ASP D 49 UNP P04626 ASN 571 ENGINEERED MUTATION SEQRES 1 A 136 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER ASP SEQRES 2 A 136 LEU GLY LYS LYS LEU LEU GLU ALA ALA ARG ALA GLY GLN SEQRES 3 A 136 ASP ASP GLU VAL ARG ILE LEU MET ALA ASN GLY ALA ASP SEQRES 4 A 136 VAL ASN ALA LYS ASP GLU TYR GLY LEU THR PRO LEU TYR SEQRES 5 A 136 LEU ALA THR ALA HIS GLY HIS LEU GLU ILE VAL GLU VAL SEQRES 6 A 136 LEU LEU LYS ASN GLY ALA ASP VAL ASN ALA VAL ASP ALA SEQRES 7 A 136 ILE GLY PHE THR PRO LEU HIS LEU ALA ALA PHE ILE GLY SEQRES 8 A 136 HIS LEU GLU ILE ALA GLU VAL LEU LEU LYS HIS GLY ALA SEQRES 9 A 136 ASP VAL ASN ALA GLN ASP LYS PHE GLY LYS THR ALA PHE SEQRES 10 A 136 ASP ILE SER ILE GLY ASN GLY ASN GLU ASP LEU ALA GLU SEQRES 11 A 136 ILE LEU GLN LYS LEU ASN SEQRES 1 B 136 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER ASP SEQRES 2 B 136 LEU GLY LYS LYS LEU LEU GLU ALA ALA ARG ALA GLY GLN SEQRES 3 B 136 ASP ASP GLU VAL ARG ILE LEU MET ALA ASN GLY ALA ASP SEQRES 4 B 136 VAL ASN ALA LYS ASP GLU TYR GLY LEU THR PRO LEU TYR SEQRES 5 B 136 LEU ALA THR ALA HIS GLY HIS LEU GLU ILE VAL GLU VAL SEQRES 6 B 136 LEU LEU LYS ASN GLY ALA ASP VAL ASN ALA VAL ASP ALA SEQRES 7 B 136 ILE GLY PHE THR PRO LEU HIS LEU ALA ALA PHE ILE GLY SEQRES 8 B 136 HIS LEU GLU ILE ALA GLU VAL LEU LEU LYS HIS GLY ALA SEQRES 9 B 136 ASP VAL ASN ALA GLN ASP LYS PHE GLY LYS THR ALA PHE SEQRES 10 B 136 ASP ILE SER ILE GLY ASN GLY ASN GLU ASP LEU ALA GLU SEQRES 11 B 136 ILE LEU GLN LYS LEU ASN SEQRES 1 C 103 HIS HIS HIS HIS HIS HIS VAL ASP CYS SER GLN PHE LEU SEQRES 2 C 103 ARG GLY GLN GLU CYS VAL GLU GLU CYS ARG VAL LEU GLN SEQRES 3 C 103 GLY LEU PRO ARG GLU TYR VAL ASN ALA ARG HIS CYS LEU SEQRES 4 C 103 PRO CYS HIS PRO GLU CYS GLN PRO GLN ASP GLY SER VAL SEQRES 5 C 103 THR CYS PHE GLY PRO GLU ALA ASP GLN CYS VAL ALA CYS SEQRES 6 C 103 ALA HIS TYR LYS ASP PRO PRO PHE CYS VAL ALA ARG CYS SEQRES 7 C 103 PRO SER GLY VAL LYS PRO ASP LEU SER TYR MET PRO ILE SEQRES 8 C 103 TRP LYS PHE PRO ASP GLU GLU GLY ALA CYS GLN PRO SEQRES 1 D 103 HIS HIS HIS HIS HIS HIS VAL ASP CYS SER GLN PHE LEU SEQRES 2 D 103 ARG GLY GLN GLU CYS VAL GLU GLU CYS ARG VAL LEU GLN SEQRES 3 D 103 GLY LEU PRO ARG GLU TYR VAL ASN ALA ARG HIS CYS LEU SEQRES 4 D 103 PRO CYS HIS PRO GLU CYS GLN PRO GLN ASP GLY SER VAL SEQRES 5 D 103 THR CYS PHE GLY PRO GLU ALA ASP GLN CYS VAL ALA CYS SEQRES 6 D 103 ALA HIS TYR LYS ASP PRO PRO PHE CYS VAL ALA ARG CYS SEQRES 7 D 103 PRO SER GLY VAL LYS PRO ASP LEU SER TYR MET PRO ILE SEQRES 8 D 103 TRP LYS PHE PRO ASP GLU GLU GLY ALA CYS GLN PRO HELIX 1 1 ASP A 13 GLY A 25 1 13 HELIX 2 2 GLN A 26 ASN A 36 1 11 HELIX 3 3 THR A 49 HIS A 57 1 9 HELIX 4 4 HIS A 59 ASN A 69 1 11 HELIX 5 5 THR A 82 GLY A 91 1 10 HELIX 6 6 HIS A 92 HIS A 102 1 11 HELIX 7 7 THR A 115 ASN A 123 1 9 HELIX 8 8 ASN A 125 GLN A 133 1 9 HELIX 9 9 LEU B 14 GLY B 25 1 12 HELIX 10 10 GLN B 26 ASN B 36 1 11 HELIX 11 11 THR B 49 GLY B 58 1 10 HELIX 12 12 HIS B 59 ASN B 69 1 11 HELIX 13 13 THR B 82 GLY B 91 1 10 HELIX 14 14 HIS B 92 HIS B 102 1 11 HELIX 15 15 THR B 115 GLY B 124 1 10 HELIX 16 16 ASN B 125 LYS B 134 1 10 SHEET 1 A 2 PHE C 12 ARG C 14 0 SHEET 2 A 2 GLU C 17 VAL C 19 -1 O VAL C 19 N PHE C 12 SHEET 1 B 2 GLU C 31 ASN C 34 0 SHEET 2 B 2 HIS C 37 PRO C 40 -1 O LEU C 39 N TYR C 32 SHEET 1 C 2 TYR C 68 ASP C 70 0 SHEET 2 C 2 PHE C 73 VAL C 75 -1 O PHE C 73 N ASP C 70 SHEET 1 D 2 PHE D 12 ARG D 14 0 SHEET 2 D 2 GLU D 17 VAL D 19 -1 O GLU D 17 N ARG D 14 SHEET 1 E 2 GLU D 31 ASN D 34 0 SHEET 2 E 2 HIS D 37 PRO D 40 -1 O LEU D 39 N TYR D 32 SHEET 1 F 2 TYR D 68 ASP D 70 0 SHEET 2 F 2 PHE D 73 VAL D 75 -1 O VAL D 75 N TYR D 68 SSBOND 1 CYS C 9 CYS C 18 1555 1555 2.04 SSBOND 2 CYS C 22 CYS C 38 1555 1555 2.03 SSBOND 3 CYS C 41 CYS C 54 1555 1555 2.01 SSBOND 4 CYS C 45 CYS C 62 1555 1555 2.03 SSBOND 5 CYS C 65 CYS C 74 1555 1555 2.03 SSBOND 6 CYS D 9 CYS D 18 1555 1555 2.04 SSBOND 7 CYS D 22 CYS D 38 1555 1555 2.03 SSBOND 8 CYS D 41 CYS D 54 1555 1555 2.04 SSBOND 9 CYS D 45 CYS D 62 1555 1555 2.05 SSBOND 10 CYS D 65 CYS D 74 1555 1555 2.03 CISPEP 1 LEU C 28 PRO C 29 0 -4.45 CISPEP 2 PRO C 71 PRO C 72 0 0.52 CISPEP 3 LEU D 28 PRO D 29 0 -9.02 CISPEP 4 PRO D 71 PRO D 72 0 -1.18 CRYST1 195.000 195.000 112.000 90.00 90.00 120.00 H 3 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005128 0.002961 0.000000 0.00000 SCALE2 0.000000 0.005922 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008929 0.00000