HEADER LYASE/LYASE INHIBITOR 31-OCT-12 4HT3
TITLE THE CRYSTAL STRUCTURE OF SALMONELLA TYPHIMURIUM TRYPTOPHAN SYNTHASE AT
TITLE 2 1.30A COMPLEXED WITH N-(4'-TRIFLUOROMETHOXYBENZENESULFONYL)-2-AMINO-
TITLE 3 1-ETHYLPHOSPHATE (F9) INHIBITOR IN THE ALPHA SITE, INTERNAL ALDIMINE
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: TRYPTOPHAN SYNTHASE ALPHA CHAIN;
COMPND 3 CHAIN: A;
COMPND 4 EC: 4.2.1.20;
COMPND 5 ENGINEERED: YES;
COMPND 6 MOL_ID: 2;
COMPND 7 MOLECULE: TRYPTOPHAN SYNTHASE BETA CHAIN;
COMPND 8 CHAIN: B;
COMPND 9 EC: 4.2.1.20;
COMPND 10 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR
SOURCE 3 TYPHIMURIUM;
SOURCE 4 ORGANISM_TAXID: 90371;
SOURCE 5 GENE: STM1727, TRPA;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: CB149;
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: DERIVATIVE OF PBR322;
SOURCE 10 MOL_ID: 2;
SOURCE 11 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR
SOURCE 12 TYPHIMURIUM;
SOURCE 13 ORGANISM_TAXID: 90371;
SOURCE 14 GENE: STM1726, TRPB;
SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 17 EXPRESSION_SYSTEM_STRAIN: CB149;
SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: DERIVATIVE OF PBR322
KEYWDS LYASE, CARBON-OXYGEN LYASE, TRYPTOPHAN BIOSYNTHESIS, SALMONELLA, F9F,
KEYWDS 2 ALLOSTERIC ENZYME, AMINO-ACID BIOSYNTHESIS, AROMATIC AMINO ACID
KEYWDS 3 BIOSYNTHESIS, PYRIDOXAL PHOSPHATE, CESIUM ION, LYASE-LYASE INHIBITOR
KEYWDS 4 COMPLEX
EXPDTA X-RAY DIFFRACTION
AUTHOR E.HILARIO,D.NIKS,M.F.DUNN,L.J.MUELLER,L.FAN
REVDAT 3 20-SEP-23 4HT3 1 REMARK
REVDAT 2 29-SEP-21 4HT3 1 REMARK LINK
REVDAT 1 01-JAN-14 4HT3 0
JRNL AUTH D.NIKS,E.HILARIO,A.DIERKERS,H.NGO,D.BORCHARDT,T.J.NEUBAUER,
JRNL AUTH 2 L.FAN,L.J.MUELLER,M.F.DUNN
JRNL TITL ALLOSTERY AND SUBSTRATE CHANNELING IN THE TRYPTOPHAN
JRNL TITL 2 SYNTHASE BIENZYME COMPLEX: EVIDENCE FOR TWO SUBUNIT
JRNL TITL 3 CONFORMATIONS AND FOUR QUATERNARY STATES.
JRNL REF BIOCHEMISTRY V. 52 6396 2013
JRNL REFN ISSN 0006-2960
JRNL PMID 23952479
JRNL DOI 10.1021/BI400795E
REMARK 2
REMARK 2 RESOLUTION. 1.30 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC
REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,
REMARK 3 : NICHOLLS,WINN,LONG,VAGIN
REMARK 3
REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.36
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 95.1
REMARK 3 NUMBER OF REFLECTIONS : 165862
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.133
REMARK 3 R VALUE (WORKING SET) : 0.131
REMARK 3 FREE R VALUE : 0.169
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000
REMARK 3 FREE R VALUE TEST SET COUNT : 8300
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.30
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.34
REMARK 3 REFLECTION IN BIN (WORKING SET) : 10879
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.83
REMARK 3 BIN R VALUE (WORKING SET) : 0.1770
REMARK 3 BIN FREE R VALUE SET COUNT : 590
REMARK 3 BIN FREE R VALUE : 0.2290
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 4996
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 187
REMARK 3 SOLVENT ATOMS : 765
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.72
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -0.03000
REMARK 3 B22 (A**2) : 0.05000
REMARK 3 B33 (A**2) : -0.02000
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.03000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): 0.044
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.045
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.025
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.315
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.972
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5608 ; 0.011 ; 0.020
REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7612 ; 1.637 ; 1.997
REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 762 ; 6.084 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 241 ;36.122 ;24.108
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 946 ;12.422 ;15.000
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;17.430 ;15.000
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 839 ; 0.124 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4250 ; 0.009 ; 0.021
REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): 5607 ; 2.637 ; 3.000
REMARK 3 SPHERICITY; FREE ATOMS (A**2): 189 ;37.877 ; 5.000
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 6070 ;14.011 ; 5.000
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 14
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 1 A 14
REMARK 3 ORIGIN FOR THE GROUP (A): 60.0526 38.2000 -24.7556
REMARK 3 T TENSOR
REMARK 3 T11: 0.0068 T22: 0.0018
REMARK 3 T33: 0.0056 T12: -0.0006
REMARK 3 T13: -0.0020 T23: 0.0003
REMARK 3 L TENSOR
REMARK 3 L11: 0.2228 L22: 0.0174
REMARK 3 L33: 0.2156 L12: -0.0450
REMARK 3 L13: 0.1229 L23: 0.0103
REMARK 3 S TENSOR
REMARK 3 S11: -0.0015 S12: 0.0081 S13: 0.0001
REMARK 3 S21: -0.0004 S22: 0.0008 S23: 0.0001
REMARK 3 S31: -0.0044 S32: 0.0144 S33: 0.0007
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 15 A 159
REMARK 3 ORIGIN FOR THE GROUP (A): 41.2620 40.0458 -23.9265
REMARK 3 T TENSOR
REMARK 3 T11: 0.0065 T22: 0.0024
REMARK 3 T33: 0.0056 T12: 0.0000
REMARK 3 T13: -0.0019 T23: 0.0001
REMARK 3 L TENSOR
REMARK 3 L11: 0.0022 L22: 0.0054
REMARK 3 L33: 0.0042 L12: 0.0018
REMARK 3 L13: -0.0021 L23: 0.0002
REMARK 3 S TENSOR
REMARK 3 S11: 0.0002 S12: -0.0001 S13: 0.0000
REMARK 3 S21: 0.0000 S22: -0.0001 S23: 0.0002
REMARK 3 S31: -0.0002 S32: 0.0000 S33: -0.0001
REMARK 3
REMARK 3 TLS GROUP : 3
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 160 A 187
REMARK 3 ORIGIN FOR THE GROUP (A): 46.6803 28.2133 -14.1337
REMARK 3 T TENSOR
REMARK 3 T11: 0.0062 T22: 0.0021
REMARK 3 T33: 0.0057 T12: -0.0002
REMARK 3 T13: -0.0021 T23: 0.0002
REMARK 3 L TENSOR
REMARK 3 L11: 0.0094 L22: 0.0315
REMARK 3 L33: 0.0371 L12: -0.0111
REMARK 3 L13: -0.0132 L23: 0.0158
REMARK 3 S TENSOR
REMARK 3 S11: -0.0001 S12: 0.0000 S13: -0.0002
REMARK 3 S21: 0.0012 S22: -0.0002 S23: 0.0005
REMARK 3 S31: 0.0018 S32: 0.0000 S33: 0.0003
REMARK 3
REMARK 3 TLS GROUP : 4
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 188 A 202
REMARK 3 ORIGIN FOR THE GROUP (A): 54.9489 27.0682 -7.9845
REMARK 3 T TENSOR
REMARK 3 T11: 0.0130 T22: 0.0014
REMARK 3 T33: 0.0067 T12: 0.0005
REMARK 3 T13: -0.0015 T23: -0.0001
REMARK 3 L TENSOR
REMARK 3 L11: 0.3200 L22: 0.5110
REMARK 3 L33: 0.4479 L12: -0.3260
REMARK 3 L13: -0.2687 L23: 0.4597
REMARK 3 S TENSOR
REMARK 3 S11: -0.0242 S12: -0.0184 S13: 0.0089
REMARK 3 S21: 0.0448 S22: 0.0231 S23: -0.0108
REMARK 3 S31: 0.0510 S32: 0.0188 S33: 0.0011
REMARK 3
REMARK 3 TLS GROUP : 5
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 203 A 268
REMARK 3 ORIGIN FOR THE GROUP (A): 50.5421 45.6661 -11.2263
REMARK 3 T TENSOR
REMARK 3 T11: 0.0065 T22: 0.0023
REMARK 3 T33: 0.0055 T12: -0.0001
REMARK 3 T13: -0.0018 T23: 0.0000
REMARK 3 L TENSOR
REMARK 3 L11: 0.0071 L22: 0.0117
REMARK 3 L33: 0.0054 L12: -0.0030
REMARK 3 L13: 0.0016 L23: 0.0013
REMARK 3 S TENSOR
REMARK 3 S11: -0.0003 S12: -0.0013 S13: 0.0003
REMARK 3 S21: 0.0005 S22: 0.0006 S23: 0.0000
REMARK 3 S31: -0.0004 S32: 0.0006 S33: -0.0003
REMARK 3
REMARK 3 TLS GROUP : 6
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : B 2 B 37
REMARK 3 ORIGIN FOR THE GROUP (A): 30.4305 16.4238 -14.0972
REMARK 3 T TENSOR
REMARK 3 T11: 0.0066 T22: 0.0021
REMARK 3 T33: 0.0057 T12: 0.0001
REMARK 3 T13: -0.0019 T23: 0.0000
REMARK 3 L TENSOR
REMARK 3 L11: 0.0097 L22: 0.0066
REMARK 3 L33: 0.0075 L12: 0.0070
REMARK 3 L13: -0.0050 L23: -0.0045
REMARK 3 S TENSOR
REMARK 3 S11: -0.0001 S12: -0.0004 S13: -0.0001
REMARK 3 S21: 0.0000 S22: 0.0000 S23: -0.0004
REMARK 3 S31: 0.0003 S32: 0.0008 S33: 0.0001
REMARK 3
REMARK 3 TLS GROUP : 7
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : B 38 B 70
REMARK 3 ORIGIN FOR THE GROUP (A): 3.9739 11.7590 -5.8138
REMARK 3 T TENSOR
REMARK 3 T11: 0.0066 T22: 0.0021
REMARK 3 T33: 0.0058 T12: -0.0001
REMARK 3 T13: -0.0019 T23: 0.0000
REMARK 3 L TENSOR
REMARK 3 L11: 0.0309 L22: 0.0031
REMARK 3 L33: 0.0180 L12: -0.0095
REMARK 3 L13: 0.0179 L23: -0.0064
REMARK 3 S TENSOR
REMARK 3 S11: 0.0007 S12: -0.0010 S13: -0.0008
REMARK 3 S21: -0.0003 S22: -0.0003 S23: 0.0003
REMARK 3 S31: 0.0011 S32: -0.0005 S33: -0.0004
REMARK 3
REMARK 3 TLS GROUP : 8
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : B 71 B 100
REMARK 3 ORIGIN FOR THE GROUP (A): 8.7269 17.5047 -5.8458
REMARK 3 T TENSOR
REMARK 3 T11: 0.0066 T22: 0.0021
REMARK 3 T33: 0.0058 T12: 0.0000
REMARK 3 T13: -0.0019 T23: 0.0001
REMARK 3 L TENSOR
REMARK 3 L11: 0.0086 L22: 0.0024
REMARK 3 L33: 0.0139 L12: 0.0017
REMARK 3 L13: 0.0097 L23: 0.0044
REMARK 3 S TENSOR
REMARK 3 S11: -0.0010 S12: -0.0010 S13: 0.0008
REMARK 3 S21: 0.0001 S22: 0.0001 S23: 0.0002
REMARK 3 S31: -0.0007 S32: -0.0008 S33: 0.0009
REMARK 3
REMARK 3 TLS GROUP : 9
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : B 101 B 126
REMARK 3 ORIGIN FOR THE GROUP (A): 19.0291 25.4832 0.1627
REMARK 3 T TENSOR
REMARK 3 T11: 0.0067 T22: 0.0022
REMARK 3 T33: 0.0056 T12: -0.0002
REMARK 3 T13: -0.0019 T23: -0.0001
REMARK 3 L TENSOR
REMARK 3 L11: 0.0087 L22: 0.0406
REMARK 3 L33: 0.0256 L12: -0.0183
REMARK 3 L13: 0.0129 L23: -0.0302
REMARK 3 S TENSOR
REMARK 3 S11: 0.0011 S12: 0.0002 S13: -0.0012
REMARK 3 S21: 0.0008 S22: 0.0000 S23: 0.0017
REMARK 3 S31: -0.0014 S32: -0.0001 S33: -0.0011
REMARK 3
REMARK 3 TLS GROUP : 10
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : B 127 B 165
REMARK 3 ORIGIN FOR THE GROUP (A): 16.9679 36.6305 -1.3570
REMARK 3 T TENSOR
REMARK 3 T11: 0.0068 T22: 0.0022
REMARK 3 T33: 0.0061 T12: 0.0001
REMARK 3 T13: -0.0018 T23: -0.0001
REMARK 3 L TENSOR
REMARK 3 L11: 0.0120 L22: 0.0121
REMARK 3 L33: 0.0290 L12: 0.0045
REMARK 3 L13: 0.0074 L23: -0.0131
REMARK 3 S TENSOR
REMARK 3 S11: 0.0005 S12: 0.0004 S13: 0.0006
REMARK 3 S21: 0.0021 S22: 0.0006 S23: 0.0010
REMARK 3 S31: -0.0018 S32: -0.0010 S33: -0.0010
REMARK 3
REMARK 3 TLS GROUP : 11
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : B 166 B 244
REMARK 3 ORIGIN FOR THE GROUP (A): 15.5022 18.1811 -12.3527
REMARK 3 T TENSOR
REMARK 3 T11: 0.0066 T22: 0.0024
REMARK 3 T33: 0.0058 T12: 0.0000
REMARK 3 T13: -0.0019 T23: 0.0001
REMARK 3 L TENSOR
REMARK 3 L11: 0.0064 L22: 0.0013
REMARK 3 L33: 0.0010 L12: 0.0027
REMARK 3 L13: -0.0008 L23: 0.0001
REMARK 3 S TENSOR
REMARK 3 S11: -0.0001 S12: -0.0002 S13: 0.0001
REMARK 3 S21: -0.0001 S22: -0.0001 S23: 0.0000
REMARK 3 S31: -0.0002 S32: 0.0003 S33: 0.0002
REMARK 3
REMARK 3 TLS GROUP : 12
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : B 245 B 301
REMARK 3 ORIGIN FOR THE GROUP (A): 14.5546 29.5521 -24.5201
REMARK 3 T TENSOR
REMARK 3 T11: 0.0067 T22: 0.0024
REMARK 3 T33: 0.0057 T12: 0.0001
REMARK 3 T13: -0.0019 T23: 0.0001
REMARK 3 L TENSOR
REMARK 3 L11: 0.0055 L22: 0.0016
REMARK 3 L33: 0.0022 L12: 0.0000
REMARK 3 L13: -0.0006 L23: -0.0019
REMARK 3 S TENSOR
REMARK 3 S11: 0.0001 S12: 0.0003 S13: 0.0006
REMARK 3 S21: -0.0001 S22: -0.0002 S23: -0.0003
REMARK 3 S31: 0.0000 S32: 0.0002 S33: 0.0001
REMARK 3
REMARK 3 TLS GROUP : 13
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : B 302 B 343
REMARK 3 ORIGIN FOR THE GROUP (A): 5.1429 25.1942 -20.9973
REMARK 3 T TENSOR
REMARK 3 T11: 0.0064 T22: 0.0020
REMARK 3 T33: 0.0057 T12: -0.0001
REMARK 3 T13: -0.0020 T23: 0.0000
REMARK 3 L TENSOR
REMARK 3 L11: 0.0145 L22: 0.0061
REMARK 3 L33: 0.0140 L12: -0.0072
REMARK 3 L13: -0.0097 L23: 0.0022
REMARK 3 S TENSOR
REMARK 3 S11: 0.0006 S12: 0.0015 S13: -0.0001
REMARK 3 S21: -0.0001 S22: -0.0005 S23: -0.0001
REMARK 3 S31: -0.0005 S32: -0.0006 S33: -0.0001
REMARK 3
REMARK 3 TLS GROUP : 14
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : B 344 B 394
REMARK 3 ORIGIN FOR THE GROUP (A): -3.7944 26.7142 -17.0277
REMARK 3 T TENSOR
REMARK 3 T11: 0.0065 T22: 0.0024
REMARK 3 T33: 0.0059 T12: 0.0003
REMARK 3 T13: -0.0018 T23: 0.0001
REMARK 3 L TENSOR
REMARK 3 L11: 0.0024 L22: 0.0154
REMARK 3 L33: 0.0392 L12: 0.0057
REMARK 3 L13: 0.0081 L23: 0.0143
REMARK 3 S TENSOR
REMARK 3 S11: -0.0006 S12: 0.0000 S13: 0.0001
REMARK 3 S21: -0.0009 S22: 0.0001 S23: 0.0008
REMARK 3 S31: -0.0037 S32: -0.0016 S33: 0.0005
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : MASK
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.20
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED
REMARK 4
REMARK 4 4HT3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-DEC-12.
REMARK 100 THE DEPOSITION ID IS D_1000075886.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 11-MAY-12
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 7.8
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : ALS
REMARK 200 BEAMLINE : 12.3.1
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.000
REMARK 200 MONOCHROMATOR : SIBYLS KOHZU DUAL DOUBLE SI(111)
REMARK 200 CRYSTAL MONOCHROMATOR (DDCM)
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM
REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 171588
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.299
REMARK 200 RESOLUTION RANGE LOW (A) : 90.614
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4
REMARK 200 DATA REDUNDANCY : 3.400
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : 0.06600
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.1000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.37
REMARK 200 COMPLETENESS FOR SHELL (%) : 96.4
REMARK 200 DATA REDUNDANCY IN SHELL : 3.40
REMARK 200 R MERGE FOR SHELL (I) : 0.48900
REMARK 200 R SYM FOR SHELL (I) : 0.48900
REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.400
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: MOLREP, DM 6.2
REMARK 200 STARTING MODEL: 1TJP
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 51.15
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM BICINE-CSOH, 10% PEG 8,000, 2 MM
REMARK 280 SPERMINE, PH 7.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,Y,-Z
REMARK 290 3555 X+1/2,Y+1/2,Z
REMARK 290 4555 -X+1/2,Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 90.92500
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.57000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 90.92500
REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 29.57000
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 8500 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 44130 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 375
REMARK 375 SPECIAL POSITION
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL
REMARK 375 POSITIONS.
REMARK 375
REMARK 375 ATOM RES CSSEQI
REMARK 375 HOH B 946 LIES ON A SPECIAL POSITION.
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET B 1
REMARK 465 GLY B 395
REMARK 465 GLU B 396
REMARK 465 ILE B 397
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 OE2 GLU A 90 C1 EDO A 309 2.01
REMARK 500 OG SER B 104 O HOH B 916 2.04
REMARK 500 O HOH A 670 O HOH A 702 2.07
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 LEU A 193 -166.37 -113.13
REMARK 500 PHE A 212 121.22 94.58
REMARK 500 ALA B 269 63.62 -119.53
REMARK 500 LEU B 304 31.40 -99.46
REMARK 500 SER B 308 -156.15 -141.33
REMARK 500 SER B 308 -156.15 -137.13
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS
REMARK 500
REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH
REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED
REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND
REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES.
REMARK 500 MODEL OMEGA
REMARK 500 ALA A 190 LEU A 191 43.70
REMARK 500
REMARK 500 REMARK: NULL
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CS A 304 CS
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 SER A 221 OG
REMARK 620 2 ALA A 265 O 75.6
REMARK 620 3 ARG A 267 O 160.6 87.4
REMARK 620 4 HOH A 462 O 60.7 88.9 110.5
REMARK 620 5 HOH A 547 O 110.5 72.3 72.0 161.0
REMARK 620 6 HOH A 649 O 98.6 74.9 67.5 44.9 128.1
REMARK 620 N 1 2 3 4 5
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CS B 411 CS
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 THR B 66 O
REMARK 620 2 THR B 66 OG1 62.0
REMARK 620 3 THR B 69 O 73.5 128.8
REMARK 620 4 THR B 71 O 88.8 65.9 90.2
REMARK 620 5 HOH B 656 O 82.2 58.2 140.2 120.8
REMARK 620 6 HOH B 822 O 153.9 92.0 128.0 77.8 85.7
REMARK 620 7 HOH B 880 O 74.3 114.9 72.6 158.5 70.7 122.8
REMARK 620 8 HOH B 948 O 147.6 137.5 75.5 82.0 129.1 52.9 105.2
REMARK 620 N 1 2 3 4 5 6 7
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CS B 412 CS
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 VAL B 231 O
REMARK 620 2 GLY B 232 O 69.4
REMARK 620 3 GLU B 256 OE2 107.8 154.7
REMARK 620 4 GLY B 268 O 95.0 130.5 74.3
REMARK 620 5 SER B 308 O 134.9 65.5 111.9 115.5
REMARK 620 N 1 2 3 4
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CS B 412 CS
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 GLY B 232 O
REMARK 620 2 GLY B 268 O 152.6
REMARK 620 3 PHE B 306 O 88.0 116.5
REMARK 620 4 SER B 308 O 71.2 129.0 64.3
REMARK 620 N 1 2 3
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CS B 412 CS
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 GLY B 232 O
REMARK 620 2 GLY B 268 O 149.1
REMARK 620 N 1
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE F9F A 301
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BCN A 302
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CS A 304
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 305
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG5 A 306
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 307
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 308
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC8
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 309
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC9
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLP B 401
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 402
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE B 403
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 404
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BCN B 405
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BCN B 406
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BCN B 407
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 408
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC8
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 409
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC9
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 410
REMARK 800
REMARK 800 SITE_IDENTIFIER: CC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CS B 411
REMARK 800
REMARK 800 SITE_IDENTIFIER: CC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CS B 412
REMARK 800
REMARK 800 SITE_IDENTIFIER: CC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 413
REMARK 800
REMARK 800 SITE_IDENTIFIER: CC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 414
REMARK 800
REMARK 800 SITE_IDENTIFIER: CC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 415
REMARK 800
REMARK 800 SITE_IDENTIFIER: CC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 416
REMARK 800
REMARK 800 SITE_IDENTIFIER: CC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE B 417
REMARK 800
REMARK 800 SITE_IDENTIFIER: CC8
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 418
REMARK 800
REMARK 800 SITE_IDENTIFIER: CC9
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 419
REMARK 800
REMARK 800 SITE_IDENTIFIER: DC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 420
REMARK 800
REMARK 800 SITE_IDENTIFIER: DC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 421
REMARK 800
REMARK 800 SITE_IDENTIFIER: DC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 422
REMARK 800
REMARK 800 SITE_IDENTIFIER: DC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 423
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 2RH9 RELATED DB: PDB
REMARK 900 TRYPTOPHAN SYNTHASE COMPLEXED WITH IGP, INTERNAL ALDIMINE, PH 9.0
REMARK 900 RELATED ID: 2RHG RELATED DB: PDB
REMARK 900 TRYPTOPHAN SYNTHASE COMPLEXED WITH IGP, PH 7.0, INTERNAL ALDIMINE
REMARK 900 RELATED ID: 2CLF RELATED DB: PDB
REMARK 900 TRYPTOPHAN SYNTHASE IN COMPLEX WITH N-(4'-TRIFLUOROMETHOXYBENZOYL)-
REMARK 900 2-AMINO-1-ETHYLPHOSPHATE (F6) - HIGHF6 COMPLEX
REMARK 900 RELATED ID: 2CLI RELATED DB: PDB
REMARK 900 TRYPTOPHAN SYNTHASE IN COMPLEX WITH N-(4'-
REMARK 900 TRIFLUOROMETHOXYBENZENESULFONYL)-2-AMINO-1-ETHYLPHOSPHATE (F9)
REMARK 900 RELATED ID: 2CLE RELATED DB: PDB
REMARK 900 TRYPTOPHAN SYNTHASE IN COMPLEX WITH N-(4'-TRIFLUOROMETHOXYBENZOYL)-
REMARK 900 2-AMINO-1-ETHYLPHOSPHATE (F6) -LOWF6 COMPLEX
REMARK 900 RELATED ID: 4HN4 RELATED DB: PDB
REMARK 900 RELATED ID: 4HPJ RELATED DB: PDB
REMARK 900 RELATED ID: 4HPX RELATED DB: PDB
DBREF 4HT3 A 1 268 UNP P00929 TRPA_SALTY 1 268
DBREF 4HT3 B 1 397 UNP P0A2K1 TRPB_SALTY 1 397
SEQRES 1 A 268 MET GLU ARG TYR GLU ASN LEU PHE ALA GLN LEU ASN ASP
SEQRES 2 A 268 ARG ARG GLU GLY ALA PHE VAL PRO PHE VAL THR LEU GLY
SEQRES 3 A 268 ASP PRO GLY ILE GLU GLN SER LEU LYS ILE ILE ASP THR
SEQRES 4 A 268 LEU ILE ASP ALA GLY ALA ASP ALA LEU GLU LEU GLY VAL
SEQRES 5 A 268 PRO PHE SER ASP PRO LEU ALA ASP GLY PRO THR ILE GLN
SEQRES 6 A 268 ASN ALA ASN LEU ARG ALA PHE ALA ALA GLY VAL THR PRO
SEQRES 7 A 268 ALA GLN CYS PHE GLU MET LEU ALA LEU ILE ARG GLU LYS
SEQRES 8 A 268 HIS PRO THR ILE PRO ILE GLY LEU LEU MET TYR ALA ASN
SEQRES 9 A 268 LEU VAL PHE ASN ASN GLY ILE ASP ALA PHE TYR ALA ARG
SEQRES 10 A 268 CYS GLU GLN VAL GLY VAL ASP SER VAL LEU VAL ALA ASP
SEQRES 11 A 268 VAL PRO VAL GLU GLU SER ALA PRO PHE ARG GLN ALA ALA
SEQRES 12 A 268 LEU ARG HIS ASN ILE ALA PRO ILE PHE ILE CYS PRO PRO
SEQRES 13 A 268 ASN ALA ASP ASP ASP LEU LEU ARG GLN VAL ALA SER TYR
SEQRES 14 A 268 GLY ARG GLY TYR THR TYR LEU LEU SER ARG SER GLY VAL
SEQRES 15 A 268 THR GLY ALA GLU ASN ARG GLY ALA LEU PRO LEU HIS HIS
SEQRES 16 A 268 LEU ILE GLU LYS LEU LYS GLU TYR HIS ALA ALA PRO ALA
SEQRES 17 A 268 LEU GLN GLY PHE GLY ILE SER SER PRO GLU GLN VAL SER
SEQRES 18 A 268 ALA ALA VAL ARG ALA GLY ALA ALA GLY ALA ILE SER GLY
SEQRES 19 A 268 SER ALA ILE VAL LYS ILE ILE GLU LYS ASN LEU ALA SER
SEQRES 20 A 268 PRO LYS GLN MET LEU ALA GLU LEU ARG SER PHE VAL SER
SEQRES 21 A 268 ALA MET LYS ALA ALA SER ARG ALA
SEQRES 1 B 397 MET THR THR LEU LEU ASN PRO TYR PHE GLY GLU PHE GLY
SEQRES 2 B 397 GLY MET TYR VAL PRO GLN ILE LEU MET PRO ALA LEU ASN
SEQRES 3 B 397 GLN LEU GLU GLU ALA PHE VAL SER ALA GLN LYS ASP PRO
SEQRES 4 B 397 GLU PHE GLN ALA GLN PHE ALA ASP LEU LEU LYS ASN TYR
SEQRES 5 B 397 ALA GLY ARG PRO THR ALA LEU THR LYS CYS GLN ASN ILE
SEQRES 6 B 397 THR ALA GLY THR ARG THR THR LEU TYR LEU LYS ARG GLU
SEQRES 7 B 397 ASP LEU LEU HIS GLY GLY ALA HIS LYS THR ASN GLN VAL
SEQRES 8 B 397 LEU GLY GLN ALA LEU LEU ALA LYS ARG MET GLY LYS SER
SEQRES 9 B 397 GLU ILE ILE ALA GLU THR GLY ALA GLY GLN HIS GLY VAL
SEQRES 10 B 397 ALA SER ALA LEU ALA SER ALA LEU LEU GLY LEU LYS CYS
SEQRES 11 B 397 ARG ILE TYR MET GLY ALA LYS ASP VAL GLU ARG GLN SER
SEQRES 12 B 397 PRO ASN VAL PHE ARG MET ARG LEU MET GLY ALA GLU VAL
SEQRES 13 B 397 ILE PRO VAL HIS SER GLY SER ALA THR LEU LYS ASP ALA
SEQRES 14 B 397 CYS ASN GLU ALA LEU ARG ASP TRP SER GLY SER TYR GLU
SEQRES 15 B 397 THR ALA HIS TYR MET LEU GLY THR ALA ALA GLY PRO HIS
SEQRES 16 B 397 PRO TYR PRO THR ILE VAL ARG GLU PHE GLN ARG MET ILE
SEQRES 17 B 397 GLY GLU GLU THR LYS ALA GLN ILE LEU ASP LYS GLU GLY
SEQRES 18 B 397 ARG LEU PRO ASP ALA VAL ILE ALA CYS VAL GLY GLY GLY
SEQRES 19 B 397 SER ASN ALA ILE GLY MET PHE ALA ASP PHE ILE ASN ASP
SEQRES 20 B 397 THR SER VAL GLY LEU ILE GLY VAL GLU PRO GLY GLY HIS
SEQRES 21 B 397 GLY ILE GLU THR GLY GLU HIS GLY ALA PRO LEU LYS HIS
SEQRES 22 B 397 GLY ARG VAL GLY ILE TYR PHE GLY MET LYS ALA PRO MET
SEQRES 23 B 397 MET GLN THR ALA ASP GLY GLN ILE GLU GLU SER TYR SER
SEQRES 24 B 397 ILE SER ALA GLY LEU ASP PHE PRO SER VAL GLY PRO GLN
SEQRES 25 B 397 HIS ALA TYR LEU ASN SER ILE GLY ARG ALA ASP TYR VAL
SEQRES 26 B 397 SER ILE THR ASP ASP GLU ALA LEU GLU ALA PHE LYS THR
SEQRES 27 B 397 LEU CYS ARG HIS GLU GLY ILE ILE PRO ALA LEU GLU SER
SEQRES 28 B 397 SER HIS ALA LEU ALA HIS ALA LEU LYS MET MET ARG GLU
SEQRES 29 B 397 GLN PRO GLU LYS GLU GLN LEU LEU VAL VAL ASN LEU SER
SEQRES 30 B 397 GLY ARG GLY ASP LYS ASP ILE PHE THR VAL HIS ASP ILE
SEQRES 31 B 397 LEU LYS ALA ARG GLY GLU ILE
HET F9F A 301 22
HET BCN A 302 11
HET CL A 303 1
HET CS A 304 1
HET PGE A 305 10
HET PG5 A 306 12
HET EDO A 307 4
HET EDO A 308 4
HET EDO A 309 4
HET PLP B 401 15
HET EDO B 402 4
HET PGE B 403 10
HET CL B 404 1
HET BCN B 405 11
HET BCN B 406 11
HET BCN B 407 11
HET CL B 408 1
HET EDO B 409 4
HET EDO B 410 4
HET CS B 411 1
HET CS B 412 3
HET EDO B 413 4
HET EDO B 414 4
HET PEG B 415 7
HET PEG B 416 7
HET PGE B 417 10
HET CL B 418 1
HET EDO B 419 4
HET CL B 420 1
HET EDO B 421 4
HET CL B 422 1
HET CL B 423 1
HETNAM F9F 2-({[4-(TRIFLUOROMETHOXY)PHENYL]SULFONYL}AMINO)ETHYL
HETNAM 2 F9F DIHYDROGEN PHOSPHATE
HETNAM BCN BICINE
HETNAM CL CHLORIDE ION
HETNAM CS CESIUM ION
HETNAM PGE TRIETHYLENE GLYCOL
HETNAM PG5 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE
HETNAM EDO 1,2-ETHANEDIOL
HETNAM PLP PYRIDOXAL-5'-PHOSPHATE
HETNAM PEG DI(HYDROXYETHYL)ETHER
HETSYN F9F N-(4'-TRIFLUOROMETHOXYBENZENESULFONYL)-2-AMINO-1-
HETSYN 2 F9F ETHYLPHOSPHATE, F9
HETSYN EDO ETHYLENE GLYCOL
HETSYN PLP VITAMIN B6 PHOSPHATE
FORMUL 3 F9F C9 H11 F3 N O7 P S
FORMUL 4 BCN 4(C6 H13 N O4)
FORMUL 5 CL 7(CL 1-)
FORMUL 6 CS 3(CS 1+)
FORMUL 7 PGE 3(C6 H14 O4)
FORMUL 8 PG5 C8 H18 O4
FORMUL 9 EDO 10(C2 H6 O2)
FORMUL 12 PLP C8 H10 N O6 P
FORMUL 26 PEG 2(C4 H10 O3)
FORMUL 35 HOH *765(H2 O)
HELIX 1 1 GLU A 2 ARG A 14 1 13
HELIX 2 2 GLY A 29 ALA A 43 1 15
HELIX 3 3 GLY A 61 ALA A 74 1 14
HELIX 4 4 THR A 77 HIS A 92 1 16
HELIX 5 5 TYR A 102 ASN A 108 1 7
HELIX 6 6 GLY A 110 GLY A 122 1 13
HELIX 7 7 PRO A 132 GLU A 135 5 4
HELIX 8 8 SER A 136 HIS A 146 1 11
HELIX 9 9 ASP A 159 GLY A 170 1 12
HELIX 10 10 LEU A 193 TYR A 203 1 11
HELIX 11 11 SER A 216 ALA A 226 1 11
HELIX 12 12 GLY A 234 ASN A 244 1 11
HELIX 13 13 SER A 247 ALA A 265 1 19
HELIX 14 14 PRO B 18 ILE B 20 5 3
HELIX 15 15 LEU B 21 LYS B 37 1 17
HELIX 16 16 ASP B 38 TYR B 52 1 15
HELIX 17 17 CYS B 62 ALA B 67 1 6
HELIX 18 18 ASP B 79 LEU B 81 5 3
HELIX 19 19 HIS B 86 MET B 101 1 16
HELIX 20 20 GLY B 113 GLY B 127 1 15
HELIX 21 21 ALA B 136 GLN B 142 1 7
HELIX 22 22 GLN B 142 MET B 152 1 11
HELIX 23 23 THR B 165 TYR B 181 1 17
HELIX 24 24 PRO B 196 ARG B 206 1 11
HELIX 25 25 ARG B 206 GLY B 221 1 16
HELIX 26 26 GLY B 234 ALA B 242 1 9
HELIX 27 27 ASP B 243 ILE B 245 5 3
HELIX 28 28 GLY B 261 GLY B 265 5 5
HELIX 29 29 ALA B 269 GLY B 274 1 6
HELIX 30 30 SER B 301 ASP B 305 5 5
HELIX 31 31 GLY B 310 ILE B 319 1 10
HELIX 32 32 ASP B 329 GLY B 344 1 16
HELIX 33 33 ALA B 348 GLN B 365 1 18
HELIX 34 34 GLY B 380 LYS B 382 5 3
HELIX 35 35 ASP B 383 ALA B 393 1 11
SHEET 1 A 9 ALA A 149 PRO A 150 0
SHEET 2 A 9 SER A 125 VAL A 128 1 N VAL A 126 O ALA A 149
SHEET 3 A 9 ILE A 97 MET A 101 1 N MET A 101 O LEU A 127
SHEET 4 A 9 LEU A 48 GLY A 51 1 N LEU A 50 O GLY A 98
SHEET 5 A 9 ALA A 18 THR A 24 1 N VAL A 23 O GLY A 51
SHEET 6 A 9 GLY A 230 SER A 233 1 O ALA A 231 N VAL A 20
SHEET 7 A 9 ALA A 208 GLY A 211 1 N GLN A 210 O ILE A 232
SHEET 8 A 9 THR A 174 LEU A 177 1 N LEU A 176 O LEU A 209
SHEET 9 A 9 ILE A 153 CYS A 154 1 N CYS A 154 O TYR A 175
SHEET 1 B 4 TYR B 8 PHE B 9 0
SHEET 2 B 4 PHE B 12 TYR B 16 -1 O PHE B 12 N PHE B 9
SHEET 3 B 4 GLY B 281 MET B 286 -1 O LYS B 283 N GLY B 13
SHEET 4 B 4 ARG B 275 TYR B 279 -1 N GLY B 277 O ALA B 284
SHEET 1 C 6 LEU B 59 LYS B 61 0
SHEET 2 C 6 THR B 71 ARG B 77 -1 O LEU B 75 N THR B 60
SHEET 3 C 6 GLN B 370 LEU B 376 1 O LEU B 372 N THR B 72
SHEET 4 C 6 ALA B 226 CYS B 230 1 N ILE B 228 O ASN B 375
SHEET 5 C 6 GLY B 251 GLY B 259 1 O ILE B 253 N VAL B 227
SHEET 6 C 6 ASP B 323 THR B 328 1 O ILE B 327 N GLY B 258
SHEET 1 D 4 GLU B 155 VAL B 159 0
SHEET 2 D 4 LYS B 129 GLY B 135 1 N ILE B 132 O ILE B 157
SHEET 3 D 4 GLU B 105 THR B 110 1 N ALA B 108 O TYR B 133
SHEET 4 D 4 ALA B 184 TYR B 186 1 O HIS B 185 N GLU B 105
LINK NZ LYS B 87 C4A PLP B 401 1555 1555 1.42
LINK OG BSER A 221 CS CS A 304 1555 1555 3.24
LINK O ALA A 265 CS CS A 304 1555 1555 3.07
LINK O ARG A 267 CS CS A 304 1555 1555 3.09
LINK CS CS A 304 O HOH A 462 1555 1555 3.24
LINK CS CS A 304 O HOH A 547 1555 1555 3.20
LINK CS CS A 304 O HOH A 649 1555 1555 3.19
LINK O THR B 66 CS CS B 411 1555 1555 3.21
LINK OG1 THR B 66 CS CS B 411 1555 1555 3.26
LINK O THR B 69 CS CS B 411 1555 1555 3.18
LINK O THR B 71 CS CS B 411 1555 1555 3.02
LINK O VAL B 231 CS A CS B 412 1555 1555 3.26
LINK O GLY B 232 CS B CS B 412 1555 1555 2.75
LINK O GLY B 232 CS A CS B 412 1555 1555 2.97
LINK O GLY B 232 CS C CS B 412 1555 1555 3.02
LINK OE2 GLU B 256 CS A CS B 412 1555 1555 3.22
LINK O GLY B 268 CS C CS B 412 1555 1555 3.03
LINK O GLY B 268 CS B CS B 412 1555 1555 3.24
LINK O GLY B 268 CS A CS B 412 1555 1555 3.44
LINK O BPHE B 306 CS B CS B 412 1555 1555 3.01
LINK O SER B 308 CS B CS B 412 1555 1555 3.14
LINK O SER B 308 CS A CS B 412 1555 1555 3.37
LINK CS CS B 411 O HOH B 656 1555 1555 3.20
LINK CS CS B 411 O HOH B 822 1555 1555 3.08
LINK CS CS B 411 O HOH B 880 1555 1555 3.44
LINK CS CS B 411 O AHOH B 948 1555 1555 2.98
CISPEP 1 ASP A 27 PRO A 28 0 3.42
CISPEP 2 PRO A 192 LEU A 193 0 -0.05
CISPEP 3 ARG B 55 PRO B 56 0 0.35
CISPEP 4 HIS B 195 PRO B 196 0 13.86
SITE 1 AC1 20 PHE A 22 GLU A 49 ALA A 59 ILE A 64
SITE 2 AC1 20 LEU A 100 LEU A 127 ALA A 129 ILE A 153
SITE 3 AC1 20 TYR A 175 THR A 183 GLY A 184 PHE A 212
SITE 4 AC1 20 GLY A 213 ILE A 232 GLY A 234 SER A 235
SITE 5 AC1 20 HOH A 406 HOH A 411 HOH A 415 PRO B 18
SITE 1 AC2 4 SER A 247 PRO A 248 LYS A 249 GLN A 250
SITE 1 AC3 4 SER A 221 ALA A 265 ARG A 267 LYS B 99
SITE 1 AC4 11 PHE A 107 ILE A 111 GLU A 135 PRO A 138
SITE 2 AC4 11 PHE A 139 HOH A 416 HOH A 435 HOH A 601
SITE 3 AC4 11 HOH A 674 TYR B 16 LYS B 283
SITE 1 AC5 12 ARG A 164 VAL A 166 ALA A 167 SER A 168
SITE 2 AC5 12 GLY A 170 ARG A 171 THR A 174 TYR A 203
SITE 3 AC5 12 HIS A 204 ALA A 205 ALA A 206 HOH A 663
SITE 1 AC6 6 PRO A 93 ALA A 137 ARG A 140 GLN A 141
SITE 2 AC6 6 EDO A 308 HOH A 455
SITE 1 AC7 4 PRO A 93 THR A 94 EDO A 307 HOH A 430
SITE 1 AC8 6 ALA A 86 LEU A 87 GLU A 90 ARG A 171
SITE 2 AC8 6 HOH A 482 HOH A 487
SITE 1 AC9 17 HIS B 86 LYS B 87 GLN B 114 THR B 190
SITE 2 AC9 17 CYS B 230 GLY B 232 GLY B 233 GLY B 234
SITE 3 AC9 17 SER B 235 ASN B 236 GLY B 303 GLU B 350
SITE 4 AC9 17 SER B 377 GLY B 378 HOH B 502 HOH B 684
SITE 5 AC9 17 HOH B 937
SITE 1 BC1 8 LYS B 87 THR B 110 GLY B 111 ALA B 112
SITE 2 BC1 8 GLY B 113 GLN B 114 HIS B 115 EDO B 419
SITE 1 BC2 8 LEU B 271 LYS B 272 GLY B 274 PRO B 285
SITE 2 BC2 8 ASN B 317 GLU B 364 CL B 423 HOH B 893
SITE 1 BC3 1 ALA B 67
SITE 1 BC4 13 GLY B 259 HIS B 260 GLU B 263 THR B 328
SITE 2 BC4 13 ASP B 329 ASP B 330 EDO B 413 EDO B 414
SITE 3 BC4 13 HOH B 539 HOH B 771 HOH B 773 HOH B 897
SITE 4 BC4 13 HOH B 904
SITE 1 BC5 10 THR B 248 VAL B 250 GLY B 251 LEU B 252
SITE 2 BC5 10 GLY B 320 ARG B 321 ASP B 323 HOH B 780
SITE 3 BC5 10 HOH B 803 HOH B 856
SITE 1 BC6 7 THR B 289 ALA B 290 ASP B 291 GLN B 293
SITE 2 BC6 7 HOH B 581 HOH B 599 HOH B 764
SITE 1 BC7 1 VAL B 117
SITE 1 BC8 7 ASP B 47 LYS B 61 LYS B 219 PEG B 416
SITE 2 BC8 7 HOH B 522 HOH B 553 HOH B 795
SITE 1 BC9 7 HIS B 273 VAL B 325 SER B 326 HOH B 578
SITE 2 BC9 7 HOH B 664 HOH B 716 HOH B 794
SITE 1 CC1 5 THR B 66 THR B 69 THR B 71 HOH B 822
SITE 2 CC1 5 HOH B 948
SITE 1 CC2 8 VAL B 231 GLY B 232 GLU B 256 GLY B 268
SITE 2 CC2 8 PRO B 270 LEU B 304 PHE B 306 SER B 308
SITE 1 CC3 7 ASP B 330 GLU B 331 BCN B 405 EDO B 414
SITE 2 CC3 7 HOH B 586 HOH B 693 HOH B 771
SITE 1 CC4 3 THR B 328 BCN B 405 EDO B 413
SITE 1 CC5 3 THR B 3 LEU B 4 ASN B 6
SITE 1 CC6 8 ASN B 51 TYR B 52 THR B 60 LYS B 61
SITE 2 CC6 8 LEU B 125 GLU B 343 EDO B 409 HOH B 870
SITE 1 CC7 8 GLU B 211 ALA B 214 GLN B 215 HOH B 524
SITE 2 CC7 8 HOH B 544 HOH B 605 HOH B 751 HOH B 756
SITE 1 CC8 1 GLY B 10
SITE 1 CC9 4 GLU B 109 GLY B 189 PHE B 306 EDO B 402
SITE 1 DC1 2 ASP B 225 HOH B 528
SITE 1 DC2 3 HOH B 669 HOH B 759 HOH B 852
SITE 1 DC3 3 ASP B 225 SER B 249 HOH B 821
SITE 1 DC4 5 PHE B 12 PRO B 285 PGE B 403 HOH B 516
SITE 2 DC4 5 HOH B 739
CRYST1 181.850 59.140 67.300 90.00 94.74 90.00 C 1 2 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.005499 0.000000 0.000456 0.00000
SCALE2 0.000000 0.016909 0.000000 0.00000
SCALE3 0.000000 0.000000 0.014910 0.00000