HEADER IMMUNE SYSTEM 05-NOV-12 4HV8 TITLE CRYSTAL STRUCTURE OF H2DB-H155A-NPM6I COMPND MOL_ID: 1; COMPND 2 MOLECULE: H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, D-B ALPHA CHAIN; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: H-2D(B); COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 9 CHAIN: B, D; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: NPM6I VARIANT PEPTIDE; COMPND 13 CHAIN: E, F; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: H2-D1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 13 ORGANISM_COMMON: MOUSE; SOURCE 14 ORGANISM_TAXID: 10090; SOURCE 15 GENE: B2M; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET; SOURCE 21 MOL_ID: 3; SOURCE 22 SYNTHETIC: YES KEYWDS VIRAL IMMUNITY, T CELL, H2DB, INFLUENZA, VIRAL ESCAPE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR S.GRAS,K.A.TWIST,J.ROSSJOHN REVDAT 6 30-OCT-24 4HV8 1 REMARK REVDAT 5 20-SEP-23 4HV8 1 REMARK SEQADV REVDAT 4 15-NOV-17 4HV8 1 REMARK REVDAT 3 24-APR-13 4HV8 1 JRNL REVDAT 2 27-MAR-13 4HV8 1 JRNL REVDAT 1 27-FEB-13 4HV8 0 JRNL AUTH S.A.VALKENBURG,S.GRAS,C.GUILLONNEAU,L.A.HATTON,N.A.BIRD, JRNL AUTH 2 K.A.TWIST,H.HALIM,D.C.JACKSON,A.W.PURCELL,S.J.TURNER, JRNL AUTH 3 P.C.DOHERTY,J.ROSSJOHN,K.KEDZIERSKA JRNL TITL PREEMPTIVE PRIMING READILY OVERCOMES STRUCTURE-BASED JRNL TITL 2 MECHANISMS OF VIRUS ESCAPE. JRNL REF PROC.NATL.ACAD.SCI.USA V. 110 5570 2013 JRNL REFN ISSN 0027-8424 JRNL PMID 23493558 JRNL DOI 10.1073/PNAS.1302935110 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 72.93 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 68324 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 3463 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.05 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.31 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 5036 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2267 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4790 REMARK 3 BIN R VALUE (WORKING SET) : 0.2248 REMARK 3 BIN FREE R VALUE : 0.2646 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.88 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 246 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6317 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 830 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.85 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.59 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.04920 REMARK 3 B22 (A**2) : -6.79570 REMARK 3 B33 (A**2) : 4.74650 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.44590 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.226 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.155 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.918 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 6612 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 8988 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2289 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 184 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 951 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 6612 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 811 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 8205 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.09 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.59 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 17.98 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4HV8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-NOV-12. REMARK 100 THE DEPOSITION ID IS D_1000075962. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUL-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.956 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68339 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.48300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.840 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3CPL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS HCL, 0.2M LISO4, 25-30% PEG REMARK 280 8000, PH 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -150.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -83.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -19.59282 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 84.12863 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 GLY A 1 REMARK 465 PRO A 278 REMARK 465 SER A 279 REMARK 465 THR A 280 REMARK 465 MET C 0 REMARK 465 SER C 279 REMARK 465 THR C 280 REMARK 465 MET D 0 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ASN A 42 CG REMARK 480 ARG A 44 CZ REMARK 480 LYS A 68 CE REMARK 480 ARG A 79 CZ REMARK 480 ARG A 121 CZ REMARK 480 LYS A 196 CE REMARK 480 GLU B 36 CD REMARK 480 GLU C 19 CB REMARK 480 ASN C 42 CG REMARK 480 GLN C 149 CD REMARK 480 GLU C 264 CD REMARK 480 LYS D 48 CD REMARK 480 GLU D 74 CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PRO A 277 O HOH A 635 2.03 REMARK 500 O PRO A 277 O HOH A 621 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 260 O HOH B 260 2655 1.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 277 C - N - CA ANGL. DEV. = 10.5 DEGREES REMARK 500 PRO A 277 C - N - CD ANGL. DEV. = -18.6 DEGREES REMARK 500 PRO C 278 C - N - CD ANGL. DEV. = -21.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 86 -4.03 93.27 REMARK 500 ARG A 194 -157.91 -131.99 REMARK 500 THR A 225 -120.23 -75.92 REMARK 500 TRP B 60 -16.12 83.69 REMARK 500 ALA C 89 -51.26 -157.43 REMARK 500 ARG C 194 -158.37 -139.02 REMARK 500 GLN C 226 35.51 -69.51 REMARK 500 ASP C 227 89.76 60.98 REMARK 500 TRP D 60 -11.59 84.96 REMARK 500 ILE E 6 -79.63 -114.25 REMARK 500 ILE F 6 -82.32 -117.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4HUU RELATED DB: PDB REMARK 900 RELATED ID: 4HUV RELATED DB: PDB REMARK 900 RELATED ID: 4HUW RELATED DB: PDB REMARK 900 RELATED ID: 4HUX RELATED DB: PDB REMARK 900 RELATED ID: 3CPL RELATED DB: PDB REMARK 900 RELATED ID: 1HOC RELATED DB: PDB DBREF 4HV8 A 1 280 UNP P01899 HA11_MOUSE 25 304 DBREF 4HV8 B 1 99 UNP P01887 B2MG_MOUSE 21 119 DBREF 4HV8 C 1 280 UNP P01899 HA11_MOUSE 25 304 DBREF 4HV8 D 1 99 UNP P01887 B2MG_MOUSE 21 119 DBREF 4HV8 E 1 9 PDB 4HV8 4HV8 1 9 DBREF 4HV8 F 1 9 PDB 4HV8 4HV8 1 9 SEQADV 4HV8 MET A 0 UNP P01899 INITIATING METHIONINE SEQADV 4HV8 ALA A 155 UNP P01899 HIS 179 ENGINEERED MUTATION SEQADV 4HV8 MET B 0 UNP P01887 INITIATING METHIONINE SEQADV 4HV8 MET C 0 UNP P01899 INITIATING METHIONINE SEQADV 4HV8 ALA C 155 UNP P01899 HIS 179 ENGINEERED MUTATION SEQADV 4HV8 MET D 0 UNP P01887 INITIATING METHIONINE SEQRES 1 A 281 MET GLY PRO HIS SER MET ARG TYR PHE GLU THR ALA VAL SEQRES 2 A 281 SER ARG PRO GLY LEU GLU GLU PRO ARG TYR ILE SER VAL SEQRES 3 A 281 GLY TYR VAL ASP ASN LYS GLU PHE VAL ARG PHE ASP SER SEQRES 4 A 281 ASP ALA GLU ASN PRO ARG TYR GLU PRO ARG ALA PRO TRP SEQRES 5 A 281 MET GLU GLN GLU GLY PRO GLU TYR TRP GLU ARG GLU THR SEQRES 6 A 281 GLN LYS ALA LYS GLY GLN GLU GLN TRP PHE ARG VAL SER SEQRES 7 A 281 LEU ARG ASN LEU LEU GLY TYR TYR ASN GLN SER ALA GLY SEQRES 8 A 281 GLY SER HIS THR LEU GLN GLN MET SER GLY CYS ASP LEU SEQRES 9 A 281 GLY SER ASP TRP ARG LEU LEU ARG GLY TYR LEU GLN PHE SEQRES 10 A 281 ALA TYR GLU GLY ARG ASP TYR ILE ALA LEU ASN GLU ASP SEQRES 11 A 281 LEU LYS THR TRP THR ALA ALA ASP MET ALA ALA GLN ILE SEQRES 12 A 281 THR ARG ARG LYS TRP GLU GLN SER GLY ALA ALA GLU ALA SEQRES 13 A 281 TYR LYS ALA TYR LEU GLU GLY GLU CYS VAL GLU TRP LEU SEQRES 14 A 281 HIS ARG TYR LEU LYS ASN GLY ASN ALA THR LEU LEU ARG SEQRES 15 A 281 THR ASP SER PRO LYS ALA HIS VAL THR HIS HIS PRO ARG SEQRES 16 A 281 SER LYS GLY GLU VAL THR LEU ARG CYS TRP ALA LEU GLY SEQRES 17 A 281 PHE TYR PRO ALA ASP ILE THR LEU THR TRP GLN LEU ASN SEQRES 18 A 281 GLY GLU GLU LEU THR GLN ASP MET GLU LEU VAL GLU THR SEQRES 19 A 281 ARG PRO ALA GLY ASP GLY THR PHE GLN LYS TRP ALA SER SEQRES 20 A 281 VAL VAL VAL PRO LEU GLY LYS GLU GLN ASN TYR THR CYS SEQRES 21 A 281 ARG VAL TYR HIS GLU GLY LEU PRO GLU PRO LEU THR LEU SEQRES 22 A 281 ARG TRP GLU PRO PRO PRO SER THR SEQRES 1 B 100 MET ILE GLN LYS THR PRO GLN ILE GLN VAL TYR SER ARG SEQRES 2 B 100 HIS PRO PRO GLU ASN GLY LYS PRO ASN ILE LEU ASN CYS SEQRES 3 B 100 TYR VAL THR GLN PHE HIS PRO PRO HIS ILE GLU ILE GLN SEQRES 4 B 100 MET LEU LYS ASN GLY LYS LYS ILE PRO LYS VAL GLU MET SEQRES 5 B 100 SER ASP MET SER PHE SER LYS ASP TRP SER PHE TYR ILE SEQRES 6 B 100 LEU ALA HIS THR GLU PHE THR PRO THR GLU THR ASP THR SEQRES 7 B 100 TYR ALA CYS ARG VAL LYS HIS ALA SER MET ALA GLU PRO SEQRES 8 B 100 LYS THR VAL TYR TRP ASP ARG ASP MET SEQRES 1 C 281 MET GLY PRO HIS SER MET ARG TYR PHE GLU THR ALA VAL SEQRES 2 C 281 SER ARG PRO GLY LEU GLU GLU PRO ARG TYR ILE SER VAL SEQRES 3 C 281 GLY TYR VAL ASP ASN LYS GLU PHE VAL ARG PHE ASP SER SEQRES 4 C 281 ASP ALA GLU ASN PRO ARG TYR GLU PRO ARG ALA PRO TRP SEQRES 5 C 281 MET GLU GLN GLU GLY PRO GLU TYR TRP GLU ARG GLU THR SEQRES 6 C 281 GLN LYS ALA LYS GLY GLN GLU GLN TRP PHE ARG VAL SER SEQRES 7 C 281 LEU ARG ASN LEU LEU GLY TYR TYR ASN GLN SER ALA GLY SEQRES 8 C 281 GLY SER HIS THR LEU GLN GLN MET SER GLY CYS ASP LEU SEQRES 9 C 281 GLY SER ASP TRP ARG LEU LEU ARG GLY TYR LEU GLN PHE SEQRES 10 C 281 ALA TYR GLU GLY ARG ASP TYR ILE ALA LEU ASN GLU ASP SEQRES 11 C 281 LEU LYS THR TRP THR ALA ALA ASP MET ALA ALA GLN ILE SEQRES 12 C 281 THR ARG ARG LYS TRP GLU GLN SER GLY ALA ALA GLU ALA SEQRES 13 C 281 TYR LYS ALA TYR LEU GLU GLY GLU CYS VAL GLU TRP LEU SEQRES 14 C 281 HIS ARG TYR LEU LYS ASN GLY ASN ALA THR LEU LEU ARG SEQRES 15 C 281 THR ASP SER PRO LYS ALA HIS VAL THR HIS HIS PRO ARG SEQRES 16 C 281 SER LYS GLY GLU VAL THR LEU ARG CYS TRP ALA LEU GLY SEQRES 17 C 281 PHE TYR PRO ALA ASP ILE THR LEU THR TRP GLN LEU ASN SEQRES 18 C 281 GLY GLU GLU LEU THR GLN ASP MET GLU LEU VAL GLU THR SEQRES 19 C 281 ARG PRO ALA GLY ASP GLY THR PHE GLN LYS TRP ALA SER SEQRES 20 C 281 VAL VAL VAL PRO LEU GLY LYS GLU GLN ASN TYR THR CYS SEQRES 21 C 281 ARG VAL TYR HIS GLU GLY LEU PRO GLU PRO LEU THR LEU SEQRES 22 C 281 ARG TRP GLU PRO PRO PRO SER THR SEQRES 1 D 100 MET ILE GLN LYS THR PRO GLN ILE GLN VAL TYR SER ARG SEQRES 2 D 100 HIS PRO PRO GLU ASN GLY LYS PRO ASN ILE LEU ASN CYS SEQRES 3 D 100 TYR VAL THR GLN PHE HIS PRO PRO HIS ILE GLU ILE GLN SEQRES 4 D 100 MET LEU LYS ASN GLY LYS LYS ILE PRO LYS VAL GLU MET SEQRES 5 D 100 SER ASP MET SER PHE SER LYS ASP TRP SER PHE TYR ILE SEQRES 6 D 100 LEU ALA HIS THR GLU PHE THR PRO THR GLU THR ASP THR SEQRES 7 D 100 TYR ALA CYS ARG VAL LYS HIS ALA SER MET ALA GLU PRO SEQRES 8 D 100 LYS THR VAL TYR TRP ASP ARG ASP MET SEQRES 1 E 9 ALA SER ASN GLU ASN ILE GLU THR MET SEQRES 1 F 9 ALA SER ASN GLU ASN ILE GLU THR MET HET SO4 A 301 5 HET SO4 A 302 5 HET SO4 A 303 5 HET SO4 B 101 5 HET SO4 C 301 5 HET SO4 D 101 5 HETNAM SO4 SULFATE ION FORMUL 7 SO4 6(O4 S 2-) FORMUL 13 HOH *830(H2 O) HELIX 1 1 ALA A 49 GLU A 55 5 7 HELIX 2 2 GLY A 56 TYR A 85 1 30 HELIX 3 3 ASP A 137 SER A 150 1 14 HELIX 4 4 GLY A 151 GLY A 162 1 12 HELIX 5 5 GLY A 162 GLY A 175 1 14 HELIX 6 6 GLY A 175 LEU A 180 1 6 HELIX 7 7 LYS A 253 GLN A 255 5 3 HELIX 8 8 ALA C 49 GLU C 55 5 7 HELIX 9 9 GLY C 56 TYR C 85 1 30 HELIX 10 10 ASP C 137 SER C 150 1 14 HELIX 11 11 GLY C 151 GLY C 162 1 12 HELIX 12 12 GLY C 162 GLY C 175 1 14 HELIX 13 13 GLY C 175 LEU C 180 1 6 HELIX 14 14 LYS C 253 TYR C 257 5 5 SHEET 1 A 8 GLU A 46 PRO A 47 0 SHEET 2 A 8 LYS A 31 ASP A 37 -1 N ARG A 35 O GLU A 46 SHEET 3 A 8 ARG A 21 VAL A 28 -1 N VAL A 28 O LYS A 31 SHEET 4 A 8 HIS A 3 VAL A 12 -1 N ARG A 6 O TYR A 27 SHEET 5 A 8 THR A 94 LEU A 103 -1 O LEU A 103 N HIS A 3 SHEET 6 A 8 LEU A 109 TYR A 118 -1 O LEU A 110 N ASP A 102 SHEET 7 A 8 ARG A 121 LEU A 126 -1 O LEU A 126 N LEU A 114 SHEET 8 A 8 TRP A 133 ALA A 135 -1 O THR A 134 N ALA A 125 SHEET 1 B 4 LYS A 186 PRO A 193 0 SHEET 2 B 4 GLU A 198 PHE A 208 -1 O THR A 200 N HIS A 192 SHEET 3 B 4 PHE A 241 PRO A 250 -1 O ALA A 245 N CYS A 203 SHEET 4 B 4 GLU A 229 LEU A 230 -1 N GLU A 229 O SER A 246 SHEET 1 C 4 LYS A 186 PRO A 193 0 SHEET 2 C 4 GLU A 198 PHE A 208 -1 O THR A 200 N HIS A 192 SHEET 3 C 4 PHE A 241 PRO A 250 -1 O ALA A 245 N CYS A 203 SHEET 4 C 4 ARG A 234 PRO A 235 -1 N ARG A 234 O GLN A 242 SHEET 1 D 4 GLU A 222 GLU A 223 0 SHEET 2 D 4 THR A 214 LEU A 219 -1 N LEU A 219 O GLU A 222 SHEET 3 D 4 TYR A 257 TYR A 262 -1 O TYR A 262 N THR A 214 SHEET 4 D 4 LEU A 270 LEU A 272 -1 O LEU A 272 N CYS A 259 SHEET 1 E 4 GLN B 6 SER B 11 0 SHEET 2 E 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 E 4 PHE B 62 PHE B 70 -1 O ALA B 66 N CYS B 25 SHEET 4 E 4 GLU B 50 MET B 51 -1 N GLU B 50 O HIS B 67 SHEET 1 F 4 GLN B 6 SER B 11 0 SHEET 2 F 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 F 4 PHE B 62 PHE B 70 -1 O ALA B 66 N CYS B 25 SHEET 4 F 4 SER B 55 PHE B 56 -1 N SER B 55 O TYR B 63 SHEET 1 G 4 LYS B 44 LYS B 45 0 SHEET 2 G 4 GLU B 36 LYS B 41 -1 N LYS B 41 O LYS B 44 SHEET 3 G 4 TYR B 78 LYS B 83 -1 O ALA B 79 N LEU B 40 SHEET 4 G 4 LYS B 91 TYR B 94 -1 O LYS B 91 N VAL B 82 SHEET 1 H 8 GLU C 46 PRO C 47 0 SHEET 2 H 8 LYS C 31 ASP C 37 -1 N ARG C 35 O GLU C 46 SHEET 3 H 8 ARG C 21 VAL C 28 -1 N GLY C 26 O PHE C 33 SHEET 4 H 8 HIS C 3 VAL C 12 -1 N PHE C 8 O VAL C 25 SHEET 5 H 8 THR C 94 LEU C 103 -1 O LEU C 103 N HIS C 3 SHEET 6 H 8 LEU C 109 TYR C 118 -1 O LEU C 110 N ASP C 102 SHEET 7 H 8 ARG C 121 LEU C 126 -1 O LEU C 126 N LEU C 114 SHEET 8 H 8 TRP C 133 ALA C 135 -1 O THR C 134 N ALA C 125 SHEET 1 I 4 LYS C 186 PRO C 193 0 SHEET 2 I 4 GLU C 198 PHE C 208 -1 O TRP C 204 N HIS C 188 SHEET 3 I 4 PHE C 241 PRO C 250 -1 O LYS C 243 N ALA C 205 SHEET 4 I 4 GLU C 229 LEU C 230 -1 N GLU C 229 O SER C 246 SHEET 1 J 4 LYS C 186 PRO C 193 0 SHEET 2 J 4 GLU C 198 PHE C 208 -1 O TRP C 204 N HIS C 188 SHEET 3 J 4 PHE C 241 PRO C 250 -1 O LYS C 243 N ALA C 205 SHEET 4 J 4 ARG C 234 PRO C 235 -1 N ARG C 234 O GLN C 242 SHEET 1 K 3 THR C 214 GLN C 218 0 SHEET 2 K 3 THR C 258 TYR C 262 -1 O TYR C 262 N THR C 214 SHEET 3 K 3 LEU C 270 LEU C 272 -1 O LEU C 272 N CYS C 259 SHEET 1 L 4 GLN D 6 SER D 11 0 SHEET 2 L 4 ASN D 21 PHE D 30 -1 O ASN D 24 N TYR D 10 SHEET 3 L 4 PHE D 62 PHE D 70 -1 O PHE D 70 N ASN D 21 SHEET 4 L 4 GLU D 50 MET D 51 -1 N GLU D 50 O HIS D 67 SHEET 1 M 4 GLN D 6 SER D 11 0 SHEET 2 M 4 ASN D 21 PHE D 30 -1 O ASN D 24 N TYR D 10 SHEET 3 M 4 PHE D 62 PHE D 70 -1 O PHE D 70 N ASN D 21 SHEET 4 M 4 SER D 55 PHE D 56 -1 N SER D 55 O TYR D 63 SHEET 1 N 4 LYS D 44 LYS D 45 0 SHEET 2 N 4 GLU D 36 LYS D 41 -1 N LYS D 41 O LYS D 44 SHEET 3 N 4 TYR D 78 LYS D 83 -1 O ARG D 81 N GLN D 38 SHEET 4 N 4 LYS D 91 TYR D 94 -1 O LYS D 91 N VAL D 82 SSBOND 1 CYS A 101 CYS A 164 1555 1555 2.42 SSBOND 2 CYS A 203 CYS A 259 1555 1555 2.28 SSBOND 3 CYS B 25 CYS B 80 1555 1555 2.05 SSBOND 4 CYS C 101 CYS C 164 1555 1555 2.53 SSBOND 5 CYS C 203 CYS C 259 1555 1555 2.20 SSBOND 6 CYS D 25 CYS D 80 1555 1555 2.19 CISPEP 1 TYR A 209 PRO A 210 0 2.66 CISPEP 2 HIS B 31 PRO B 32 0 4.92 CISPEP 3 SER C 88 ALA C 89 0 -2.32 CISPEP 4 TYR C 209 PRO C 210 0 -1.35 CISPEP 5 LEU C 219 ASN C 220 0 -1.79 CISPEP 6 HIS D 31 PRO D 32 0 2.89 SITE 1 AC1 3 GLN A 141 ARG A 145 HOH A 481 SITE 1 AC2 3 ARG A 111 TYR A 113 LYS B 58 SITE 1 AC3 6 ARG A 21 HOH A 548 HOH A 580 HOH A 663 SITE 2 AC3 6 MET B 54 HOH B 242 SITE 1 AC4 2 ARG B 12 HIS B 67 SITE 1 AC5 5 ARG C 111 TYR C 113 HOH C 471 HOH C 533 SITE 2 AC5 5 LYS D 58 SITE 1 AC6 6 SER A 195 LYS A 196 PRO D 90 LYS D 91 SITE 2 AC6 6 THR D 92 HOH D 250 CRYST1 83.920 72.930 86.380 90.00 103.11 90.00 P 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011916 0.000000 0.002775 0.00000 SCALE2 0.000000 0.013712 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011887 0.00000