HEADER IMMUNE SYSTEM 09-NOV-12 4HX1 TITLE STRUCTURE OF HLA-A68 COMPLEXED WITH A TUMOR ANTIGEN DERIVED PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MHC CLASS I ANTIGEN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 25-298; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: BETA-2-MICROGLOBULIN FORM PI 5.3; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: 9-MER PEPTIDE FROM TYROSINASE-RELATED PROTEIN-2; COMPND 13 CHAIN: C; COMPND 14 SYNONYM: TUMOR ANTIGEN DERIVED PEPTIDE; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HLA-A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: B2M; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 18 ORGANISM_COMMON: HUMAN; SOURCE 19 ORGANISM_TAXID: 9606; SOURCE 20 OTHER_DETAILS: PEPTIDE DIRIVED FROM TUMOR ANTIGEN KEYWDS HLA MOLECULES, PEPTIDE PRESENTATION, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR L.NIU,H.CHENG,S.ZHANG,S.TAN,Y.ZHANG,J.QI,J.LIU,G.F.GAO REVDAT 1 02-OCT-13 4HX1 0 JRNL AUTH L.NIU,H.CHENG,S.ZHANG,S.TAN,Y.ZHANG,J.QI,J.LIU,G.F.GAO JRNL TITL STRUCTURAL BASIS FOR THE DIFFERENTIAL CLASSIFICATION OF JRNL TITL 2 HLA-A*6802 AND HLA-A*6801 INTO THE A2 AND A3 SUPERTYPES JRNL REF MOL.IMMUNOL. V. 55 381 2013 JRNL REFN ISSN 0161-5890 JRNL PMID 23566939 JRNL DOI 10.1016/J.MOLIMM.2013.03.015 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.46 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 3 NUMBER OF REFLECTIONS : 40466 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 2053 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.4662 - 4.4401 0.97 2750 140 0.1775 0.2325 REMARK 3 2 4.4401 - 3.5257 0.73 1957 134 0.1594 0.1978 REMARK 3 3 3.5257 - 3.0805 0.98 2652 145 0.1850 0.1909 REMARK 3 4 3.0805 - 2.7990 1.00 2677 161 0.1890 0.2346 REMARK 3 5 2.7990 - 2.5985 1.00 2732 113 0.1961 0.2134 REMARK 3 6 2.5985 - 2.4454 1.00 2686 131 0.1932 0.2429 REMARK 3 7 2.4454 - 2.3229 1.00 2673 154 0.1989 0.2433 REMARK 3 8 2.3229 - 2.2219 0.68 1823 104 0.2098 0.2631 REMARK 3 9 2.2219 - 2.1363 0.98 2626 148 0.1924 0.2216 REMARK 3 10 2.1363 - 2.0626 1.00 2665 152 0.1861 0.2029 REMARK 3 11 2.0626 - 1.9982 1.00 2612 150 0.1880 0.2302 REMARK 3 12 1.9982 - 1.9410 1.00 2706 127 0.2053 0.2264 REMARK 3 13 1.9410 - 1.8900 0.98 2623 117 0.2595 0.3647 REMARK 3 14 1.8900 - 1.8438 1.00 2685 122 0.2353 0.2941 REMARK 3 15 1.8438 - 1.8019 0.97 2546 155 0.2461 0.2882 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.86 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 28.83 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.790 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.59 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.00510 REMARK 3 B22 (A**2) : 0.33050 REMARK 3 B33 (A**2) : -2.33550 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -9.41750 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3262 REMARK 3 ANGLE : 0.958 4423 REMARK 3 CHIRALITY : 0.069 446 REMARK 3 PLANARITY : 0.004 578 REMARK 3 DIHEDRAL : 15.407 1191 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 18 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 1:56) REMARK 3 ORIGIN FOR THE GROUP (A): 18.6511 -21.6052 -15.4246 REMARK 3 T TENSOR REMARK 3 T11: 0.1709 T22: 0.1283 REMARK 3 T33: 0.1600 T12: -0.0210 REMARK 3 T13: 0.0096 T23: 0.0032 REMARK 3 L TENSOR REMARK 3 L11: 0.5970 L22: 0.8039 REMARK 3 L33: 0.3054 L12: -0.1396 REMARK 3 L13: 0.4119 L23: 0.1966 REMARK 3 S TENSOR REMARK 3 S11: 0.0372 S12: -0.0111 S13: -0.0538 REMARK 3 S21: -0.0182 S22: -0.0304 S23: 0.1236 REMARK 3 S31: 0.1554 S32: -0.0542 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 57:84) REMARK 3 ORIGIN FOR THE GROUP (A): 26.5906 -20.6964 -7.0671 REMARK 3 T TENSOR REMARK 3 T11: 0.1788 T22: 0.1529 REMARK 3 T33: 0.1909 T12: -0.0047 REMARK 3 T13: -0.0091 T23: 0.0083 REMARK 3 L TENSOR REMARK 3 L11: 0.1285 L22: 0.2607 REMARK 3 L33: 0.1788 L12: -0.1907 REMARK 3 L13: 0.0609 L23: -0.1207 REMARK 3 S TENSOR REMARK 3 S11: -0.0169 S12: -0.0377 S13: -0.0247 REMARK 3 S21: 0.0317 S22: 0.0436 S23: 0.0513 REMARK 3 S31: 0.1051 S32: 0.0247 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 85:137) REMARK 3 ORIGIN FOR THE GROUP (A): 27.2962 -6.8705 -14.1552 REMARK 3 T TENSOR REMARK 3 T11: 0.1381 T22: 0.1365 REMARK 3 T33: 0.1368 T12: -0.0017 REMARK 3 T13: 0.0124 T23: 0.0148 REMARK 3 L TENSOR REMARK 3 L11: 0.5390 L22: 0.7114 REMARK 3 L33: 0.3695 L12: 0.1136 REMARK 3 L13: 0.2692 L23: 0.4399 REMARK 3 S TENSOR REMARK 3 S11: -0.0141 S12: 0.0816 S13: 0.0670 REMARK 3 S21: -0.0386 S22: 0.0070 S23: 0.0077 REMARK 3 S31: -0.0915 S32: -0.0355 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 138:162) REMARK 3 ORIGIN FOR THE GROUP (A): 37.1659 -7.6187 -11.4719 REMARK 3 T TENSOR REMARK 3 T11: 0.1719 T22: 0.1781 REMARK 3 T33: 0.2126 T12: -0.0037 REMARK 3 T13: 0.0071 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 0.2834 L22: 0.0292 REMARK 3 L33: 0.1318 L12: -0.0693 REMARK 3 L13: 0.1925 L23: 0.0180 REMARK 3 S TENSOR REMARK 3 S11: -0.0804 S12: 0.0439 S13: 0.0942 REMARK 3 S21: 0.0706 S22: 0.0569 S23: -0.1913 REMARK 3 S31: -0.0718 S32: 0.1770 S33: -0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 163:185) REMARK 3 ORIGIN FOR THE GROUP (A): 24.1362 -22.6375 -32.4106 REMARK 3 T TENSOR REMARK 3 T11: 0.2203 T22: 0.1750 REMARK 3 T33: 0.1832 T12: 0.0375 REMARK 3 T13: 0.0131 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 0.1981 L22: 0.1710 REMARK 3 L33: 0.2204 L12: -0.1960 REMARK 3 L13: -0.1919 L23: 0.0635 REMARK 3 S TENSOR REMARK 3 S11: 0.1767 S12: 0.1211 S13: -0.0602 REMARK 3 S21: -0.1617 S22: -0.1025 S23: 0.0275 REMARK 3 S31: 0.1854 S32: 0.0088 S33: 0.0001 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 186:262) REMARK 3 ORIGIN FOR THE GROUP (A): -1.3080 -3.7680 -37.5443 REMARK 3 T TENSOR REMARK 3 T11: 0.2081 T22: 0.1929 REMARK 3 T33: 0.1709 T12: 0.0110 REMARK 3 T13: -0.0312 T23: -0.0011 REMARK 3 L TENSOR REMARK 3 L11: 0.5823 L22: 0.1898 REMARK 3 L33: 0.6813 L12: -0.1004 REMARK 3 L13: 0.1754 L23: -0.3702 REMARK 3 S TENSOR REMARK 3 S11: -0.0326 S12: 0.1053 S13: 0.0269 REMARK 3 S21: 0.0189 S22: -0.0387 S23: -0.0584 REMARK 3 S31: -0.1095 S32: -0.0670 S33: -0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 263:274) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4291 -8.8086 -45.5639 REMARK 3 T TENSOR REMARK 3 T11: 0.2179 T22: 0.2282 REMARK 3 T33: 0.1999 T12: 0.0012 REMARK 3 T13: -0.0476 T23: 0.0229 REMARK 3 L TENSOR REMARK 3 L11: 0.0889 L22: 0.1569 REMARK 3 L33: 0.1934 L12: 0.0482 REMARK 3 L13: -0.0557 L23: 0.1676 REMARK 3 S TENSOR REMARK 3 S11: 0.0307 S12: 0.0636 S13: 0.1609 REMARK 3 S21: -0.1184 S22: -0.0332 S23: -0.0248 REMARK 3 S31: 0.0887 S32: 0.0971 S33: -0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 2:12) REMARK 3 ORIGIN FOR THE GROUP (A): 3.5670 -6.7304 -17.0810 REMARK 3 T TENSOR REMARK 3 T11: 0.1872 T22: 0.2380 REMARK 3 T33: 0.2325 T12: -0.0166 REMARK 3 T13: -0.0037 T23: -0.0210 REMARK 3 L TENSOR REMARK 3 L11: 0.1624 L22: 0.1326 REMARK 3 L33: 0.1819 L12: 0.0551 REMARK 3 L13: -0.1853 L23: -0.1116 REMARK 3 S TENSOR REMARK 3 S11: -0.0994 S12: -0.0399 S13: 0.0337 REMARK 3 S21: 0.0307 S22: 0.1112 S23: -0.0996 REMARK 3 S31: -0.1870 S32: 0.0007 S33: 0.0000 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 13:20) REMARK 3 ORIGIN FOR THE GROUP (A): -7.2417 -22.0132 -31.7668 REMARK 3 T TENSOR REMARK 3 T11: 0.3385 T22: 0.4793 REMARK 3 T33: 0.6120 T12: -0.2546 REMARK 3 T13: 0.0244 T23: -0.3674 REMARK 3 L TENSOR REMARK 3 L11: 0.0288 L22: 0.0415 REMARK 3 L33: 0.1799 L12: 0.0275 REMARK 3 L13: -0.0690 L23: -0.0860 REMARK 3 S TENSOR REMARK 3 S11: -0.0996 S12: 0.2425 S13: -0.1327 REMARK 3 S21: -0.5805 S22: 0.2473 S23: 0.1131 REMARK 3 S31: 0.2157 S32: 0.0305 S33: -0.0001 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 21:31) REMARK 3 ORIGIN FOR THE GROUP (A): 1.1410 -15.6541 -21.1034 REMARK 3 T TENSOR REMARK 3 T11: 0.1790 T22: 0.2233 REMARK 3 T33: 0.2435 T12: -0.0502 REMARK 3 T13: 0.0028 T23: -0.0036 REMARK 3 L TENSOR REMARK 3 L11: 0.1780 L22: 0.0870 REMARK 3 L33: 0.1515 L12: -0.1121 REMARK 3 L13: -0.0561 L23: -0.0620 REMARK 3 S TENSOR REMARK 3 S11: -0.0125 S12: -0.0540 S13: -0.2946 REMARK 3 S21: 0.0492 S22: 0.0864 S23: -0.0627 REMARK 3 S31: 0.1278 S32: -0.0799 S33: 0.0001 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 32:42) REMARK 3 ORIGIN FOR THE GROUP (A): 0.8948 -13.7102 -10.6264 REMARK 3 T TENSOR REMARK 3 T11: 0.2045 T22: 0.4073 REMARK 3 T33: 0.2533 T12: -0.0747 REMARK 3 T13: 0.0424 T23: 0.0427 REMARK 3 L TENSOR REMARK 3 L11: 0.4710 L22: 0.4016 REMARK 3 L33: 0.0196 L12: 0.1846 REMARK 3 L13: 0.0816 L23: 0.1087 REMARK 3 S TENSOR REMARK 3 S11: 0.2385 S12: -0.4712 S13: 0.0471 REMARK 3 S21: 0.3744 S22: -0.2106 S23: 0.1673 REMARK 3 S31: 0.2403 S32: -0.2950 S33: 0.0642 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 43:47) REMARK 3 ORIGIN FOR THE GROUP (A): -11.2282 -20.2295 -12.2967 REMARK 3 T TENSOR REMARK 3 T11: 0.2711 T22: 0.4562 REMARK 3 T33: 0.3867 T12: -0.0113 REMARK 3 T13: 0.0382 T23: 0.0091 REMARK 3 L TENSOR REMARK 3 L11: 0.0147 L22: 0.0241 REMARK 3 L33: 0.0203 L12: 0.0083 REMARK 3 L13: -0.0222 L23: -0.0050 REMARK 3 S TENSOR REMARK 3 S11: -0.2073 S12: -0.0840 S13: -0.0275 REMARK 3 S21: 0.5610 S22: -0.0670 S23: 0.1007 REMARK 3 S31: 0.1877 S32: -0.3099 S33: -0.0002 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 48:52) REMARK 3 ORIGIN FOR THE GROUP (A): -0.0482 -24.6909 -14.0899 REMARK 3 T TENSOR REMARK 3 T11: 0.2867 T22: 0.2784 REMARK 3 T33: 0.5250 T12: -0.0066 REMARK 3 T13: 0.1217 T23: 0.1234 REMARK 3 L TENSOR REMARK 3 L11: 0.3227 L22: 0.0513 REMARK 3 L33: 0.0862 L12: 0.1293 REMARK 3 L13: -0.0353 L23: -0.0188 REMARK 3 S TENSOR REMARK 3 S11: -0.2223 S12: 0.0375 S13: -0.3662 REMARK 3 S21: -0.0284 S22: -0.1262 S23: -0.0620 REMARK 3 S31: 0.3512 S32: 0.1547 S33: -0.0217 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 53:57) REMARK 3 ORIGIN FOR THE GROUP (A): 13.2775 -15.7607 -15.9670 REMARK 3 T TENSOR REMARK 3 T11: 0.2007 T22: 0.1905 REMARK 3 T33: 0.2137 T12: 0.0036 REMARK 3 T13: 0.0321 T23: 0.0344 REMARK 3 L TENSOR REMARK 3 L11: 0.0096 L22: 0.0101 REMARK 3 L33: -0.0003 L12: 0.0119 REMARK 3 L13: 0.0073 L23: 0.0065 REMARK 3 S TENSOR REMARK 3 S11: -0.1751 S12: -0.0682 S13: -0.1229 REMARK 3 S21: 0.3127 S22: 0.2140 S23: 0.0333 REMARK 3 S31: -0.2576 S32: 0.0935 S33: -0.0000 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 58:72) REMARK 3 ORIGIN FOR THE GROUP (A): 6.6120 -14.7334 -18.5568 REMARK 3 T TENSOR REMARK 3 T11: 0.1725 T22: 0.1920 REMARK 3 T33: 0.2196 T12: -0.0194 REMARK 3 T13: 0.0135 T23: 0.0272 REMARK 3 L TENSOR REMARK 3 L11: 0.2471 L22: 0.2681 REMARK 3 L33: 0.0368 L12: -0.2852 REMARK 3 L13: -0.0481 L23: 0.0528 REMARK 3 S TENSOR REMARK 3 S11: -0.0169 S12: -0.1085 S13: -0.1647 REMARK 3 S21: 0.0673 S22: -0.0113 S23: -0.0041 REMARK 3 S31: 0.1279 S32: -0.0015 S33: -0.0000 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 73:78) REMARK 3 ORIGIN FOR THE GROUP (A): -16.9770 -19.3102 -24.7046 REMARK 3 T TENSOR REMARK 3 T11: 0.2961 T22: 0.6254 REMARK 3 T33: 0.4173 T12: -0.1464 REMARK 3 T13: 0.0239 T23: 0.0300 REMARK 3 L TENSOR REMARK 3 L11: 0.1228 L22: 0.0439 REMARK 3 L33: 0.0545 L12: 0.0601 REMARK 3 L13: -0.0807 L23: -0.0404 REMARK 3 S TENSOR REMARK 3 S11: -0.1172 S12: 0.0188 S13: 0.1580 REMARK 3 S21: -0.3270 S22: 0.0063 S23: 0.3568 REMARK 3 S31: -0.0039 S32: -0.1860 S33: -0.0096 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 79:91) REMARK 3 ORIGIN FOR THE GROUP (A): -3.3029 -8.6724 -10.2695 REMARK 3 T TENSOR REMARK 3 T11: 0.1793 T22: 0.4613 REMARK 3 T33: 0.2385 T12: -0.0444 REMARK 3 T13: 0.0250 T23: -0.0137 REMARK 3 L TENSOR REMARK 3 L11: 0.5328 L22: 0.0207 REMARK 3 L33: 0.1402 L12: -0.1312 REMARK 3 L13: 0.2779 L23: -0.0190 REMARK 3 S TENSOR REMARK 3 S11: -0.1101 S12: -0.5453 S13: 0.0949 REMARK 3 S21: 0.0389 S22: 0.0929 S23: 0.2164 REMARK 3 S31: -0.0398 S32: -0.6370 S33: 0.0237 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 92:100) REMARK 3 ORIGIN FOR THE GROUP (A): -8.6509 -10.3688 -23.5258 REMARK 3 T TENSOR REMARK 3 T11: 0.2216 T22: 0.3571 REMARK 3 T33: 0.2451 T12: -0.0364 REMARK 3 T13: -0.0131 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 0.1127 L22: 0.0317 REMARK 3 L33: 0.0112 L12: 0.0024 REMARK 3 L13: -0.0439 L23: 0.0058 REMARK 3 S TENSOR REMARK 3 S11: 0.1030 S12: -0.0267 S13: 0.2144 REMARK 3 S21: -0.2150 S22: 0.0914 S23: 0.0298 REMARK 3 S31: -0.2612 S32: -0.3618 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4HX1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-NOV-12. REMARK 100 THE RCSB ID CODE IS RCSB076026. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-MAY-12 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97930 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41016 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.27100 REMARK 200 R SYM FOR SHELL (I) : 0.27100 REMARK 200 FOR SHELL : 4.906 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM TRIS, 8% PEG8000, PH 8.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 64.61850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 18.92850 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 64.61850 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 18.92850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 68 O HOH A 508 1.93 REMARK 500 O HOH A 599 O HOH A 671 1.95 REMARK 500 O HOH A 675 O HOH A 680 1.96 REMARK 500 OH TYR B 64 O HOH B 266 2.02 REMARK 500 OE1 GLU A 154 O HOH A 529 2.03 REMARK 500 O HOH A 612 O HOH A 676 2.05 REMARK 500 O HOH A 570 O HOH A 634 2.05 REMARK 500 O HOH B 277 O HOH B 281 2.06 REMARK 500 OE1 GLN A 255 O HOH A 630 2.06 REMARK 500 OD1 ASP C 4 O HOH C 113 2.06 REMARK 500 O HOH A 557 O HOH A 641 2.07 REMARK 500 O HOH A 467 O HOH A 603 2.07 REMARK 500 O HOH A 589 O HOH A 656 2.08 REMARK 500 O PRO B 33 O HOH B 236 2.09 REMARK 500 O ASP B 35 O HOH B 236 2.10 REMARK 500 N ILE B 2 O HOH B 278 2.12 REMARK 500 O HOH A 485 O HOH A 614 2.12 REMARK 500 O HOH A 535 O HOH A 683 2.13 REMARK 500 O HOH A 497 O HOH A 584 2.14 REMARK 500 NZ LYS B 59 O HOH B 275 2.17 REMARK 500 O HOH A 466 O HOH A 503 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 29 -124.94 51.17 REMARK 500 THR A 178 -54.02 -127.35 REMARK 500 PRO B 33 -168.55 -73.62 REMARK 500 GLU B 48 -72.05 -61.30 REMARK 500 TRP B 61 -3.29 75.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4HWZ RELATED DB: PDB DBREF 4HX1 A 1 274 UNP Q1ELT0 Q1ELT0_HUMAN 25 298 DBREF 4HX1 B 2 100 UNP P61769 B2MG_HUMAN 21 119 DBREF 4HX1 C 1 9 UNP O75767 O75767_HUMAN 180 188 SEQADV 4HX1 LYS A 273 UNP Q1ELT0 ARG 297 CONFLICT SEQRES 1 A 274 GLY SER HIS SER MET ARG TYR PHE TYR THR SER MET SER SEQRES 2 A 274 ARG PRO GLY ARG GLY GLU PRO ARG PHE ILE ALA VAL GLY SEQRES 3 A 274 TYR VAL ASP ASP THR GLN PHE VAL ARG PHE ASP SER ASP SEQRES 4 A 274 ALA ALA SER GLN ARG MET GLU PRO ARG ALA PRO TRP ILE SEQRES 5 A 274 GLU GLN GLU GLY PRO GLU TYR TRP ASP ARG ASN THR ARG SEQRES 6 A 274 ASN VAL LYS ALA GLN SER GLN THR ASP ARG VAL ASP LEU SEQRES 7 A 274 GLY THR LEU ARG GLY TYR TYR ASN GLN SER GLU ALA GLY SEQRES 8 A 274 SER HIS THR ILE GLN ARG MET TYR GLY CYS ASP VAL GLY SEQRES 9 A 274 PRO ASP GLY ARG PHE LEU ARG GLY TYR HIS GLN TYR ALA SEQRES 10 A 274 TYR ASP GLY LYS ASP TYR ILE ALA LEU LYS GLU ASP LEU SEQRES 11 A 274 ARG SER TRP THR ALA ALA ASP MET ALA ALA GLN THR THR SEQRES 12 A 274 LYS HIS LYS TRP GLU ALA ALA HIS VAL ALA GLU GLN TRP SEQRES 13 A 274 ARG ALA TYR LEU GLU GLY THR CYS VAL GLU TRP LEU ARG SEQRES 14 A 274 ARG TYR LEU GLU ASN GLY LYS GLU THR LEU GLN ARG THR SEQRES 15 A 274 ASP ALA PRO LYS THR HIS MET THR HIS HIS ALA VAL SER SEQRES 16 A 274 ASP HIS GLU ALA THR LEU ARG CYS TRP ALA LEU SER PHE SEQRES 17 A 274 TYR PRO ALA GLU ILE THR LEU THR TRP GLN ARG ASP GLY SEQRES 18 A 274 GLU ASP GLN THR GLN ASP THR GLU LEU VAL GLU THR ARG SEQRES 19 A 274 PRO ALA GLY ASP GLY THR PHE GLN LYS TRP VAL ALA VAL SEQRES 20 A 274 VAL VAL PRO SER GLY GLN GLU GLN ARG TYR THR CYS HIS SEQRES 21 A 274 VAL GLN HIS GLU GLY LEU PRO LYS PRO LEU THR LEU LYS SEQRES 22 A 274 TRP SEQRES 1 B 99 ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG HIS SEQRES 2 B 99 PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS TYR SEQRES 3 B 99 VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP LEU SEQRES 4 B 99 LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SER SEQRES 5 B 99 ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU LEU SEQRES 6 B 99 TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU TYR SEQRES 7 B 99 ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO LYS SEQRES 8 B 99 ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 C 9 SER VAL TYR ASP PHE PHE VAL TRP LEU HET GOL A 301 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 GOL C3 H8 O3 FORMUL 5 HOH *380(H2 O) HELIX 1 1 ALA A 49 GLU A 53 5 5 HELIX 2 2 GLY A 56 TYR A 85 1 30 HELIX 3 3 ASP A 137 ALA A 150 1 14 HELIX 4 4 HIS A 151 GLY A 162 1 12 HELIX 5 5 GLY A 162 GLY A 175 1 14 HELIX 6 6 GLY A 175 GLN A 180 1 6 HELIX 7 7 GLN A 253 GLN A 255 5 3 SHEET 1 A 8 GLU A 46 PRO A 47 0 SHEET 2 A 8 THR A 31 ASP A 37 -1 N ARG A 35 O GLU A 46 SHEET 3 A 8 ARG A 21 VAL A 28 -1 N GLY A 26 O PHE A 33 SHEET 4 A 8 HIS A 3 MET A 12 -1 N ARG A 6 O TYR A 27 SHEET 5 A 8 THR A 94 VAL A 103 -1 O ARG A 97 N TYR A 9 SHEET 6 A 8 PHE A 109 TYR A 118 -1 O LEU A 110 N ASP A 102 SHEET 7 A 8 LYS A 121 LEU A 126 -1 O LEU A 126 N HIS A 114 SHEET 8 A 8 TRP A 133 ALA A 135 -1 O THR A 134 N ALA A 125 SHEET 1 B 4 LYS A 186 ALA A 193 0 SHEET 2 B 4 GLU A 198 PHE A 208 -1 O THR A 200 N HIS A 192 SHEET 3 B 4 PHE A 241 PRO A 250 -1 O VAL A 245 N CYS A 203 SHEET 4 B 4 THR A 228 LEU A 230 -1 N GLU A 229 O ALA A 246 SHEET 1 C 4 LYS A 186 ALA A 193 0 SHEET 2 C 4 GLU A 198 PHE A 208 -1 O THR A 200 N HIS A 192 SHEET 3 C 4 PHE A 241 PRO A 250 -1 O VAL A 245 N CYS A 203 SHEET 4 C 4 ARG A 234 PRO A 235 -1 N ARG A 234 O GLN A 242 SHEET 1 D 4 GLU A 222 GLN A 224 0 SHEET 2 D 4 THR A 214 ARG A 219 -1 N ARG A 219 O GLU A 222 SHEET 3 D 4 TYR A 257 GLN A 262 -1 O HIS A 260 N THR A 216 SHEET 4 D 4 LEU A 270 LYS A 273 -1 O LEU A 272 N CYS A 259 SHEET 1 E 4 LYS B 7 SER B 12 0 SHEET 2 E 4 ASN B 22 PHE B 31 -1 O ASN B 25 N TYR B 11 SHEET 3 E 4 PHE B 63 PHE B 71 -1 O THR B 69 N LEU B 24 SHEET 4 E 4 GLU B 51 HIS B 52 -1 N GLU B 51 O TYR B 68 SHEET 1 F 4 LYS B 7 SER B 12 0 SHEET 2 F 4 ASN B 22 PHE B 31 -1 O ASN B 25 N TYR B 11 SHEET 3 F 4 PHE B 63 PHE B 71 -1 O THR B 69 N LEU B 24 SHEET 4 F 4 SER B 56 PHE B 57 -1 N SER B 56 O TYR B 64 SHEET 1 G 4 GLU B 45 ARG B 46 0 SHEET 2 G 4 GLU B 37 LYS B 42 -1 N LYS B 42 O GLU B 45 SHEET 3 G 4 TYR B 79 ASN B 84 -1 O ARG B 82 N ASP B 39 SHEET 4 G 4 LYS B 92 LYS B 95 -1 O LYS B 92 N VAL B 83 SSBOND 1 CYS A 101 CYS A 164 1555 1555 2.05 SSBOND 2 CYS A 203 CYS A 259 1555 1555 2.03 SSBOND 3 CYS B 26 CYS B 81 1555 1555 2.03 CISPEP 1 TYR A 209 PRO A 210 0 0.53 CISPEP 2 HIS B 32 PRO B 33 0 2.30 SITE 1 AC1 10 ASN A 66 ALA A 69 GLN A 70 THR A 73 SITE 2 AC1 10 HOH A 404 HOH A 406 HOH A 438 TYR C 3 SITE 3 AC1 10 ASP C 4 PHE C 5 CRYST1 129.237 37.857 108.323 90.00 120.04 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007738 0.000000 0.004474 0.00000 SCALE2 0.000000 0.026415 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010664 0.00000