HEADER TEXTURE OF CONNECTIVE TISSUE 20-NOV-77 4HYA TITLE HYALURONIC ACID, THE ROLE OF DIVALENT CATIONS IN CONFORMATION AND TITLE 2 PACKING CAVEAT 4HYA GCU A 1 HAS WRONG CHIRALITY AT ATOM C1 GCU A 3 HAS WRONG CAVEAT 2 4HYA CHIRALITY AT ATOM C1 GCU A 5 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE-(1-4)-ALPHA-D- COMPND 3 GLUCOPYRANURONIC ACID-(1-3)-2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE- COMPND 4 (1-4)-ALPHA-D-GLUCOPYRANURONIC ACID-(1-3)-2-ACETAMIDO-2-DEOXY-BETA-D- COMPND 5 GLUCOPYRANOSE-(1-4)-ALPHA-D-GLUCOPYRANURONIC ACID; COMPND 6 CHAIN: A; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1 KEYWDS TEXTURE OF CONNECTIVE TISSUE EXPDTA FIBER DIFFRACTION AUTHOR S.ARNOTT REVDAT 12 28-FEB-24 4HYA 1 HETSYN REVDAT 11 29-JUL-20 4HYA 1 CAVEAT COMPND REMARK DBREF REVDAT 11 2 1 HETNAM LINK SITE ATOM REVDAT 10 04-FEB-15 4HYA 1 LINK REVDAT 9 13-JUL-11 4HYA 1 VERSN REVDAT 8 25-AUG-09 4HYA 1 SOURCE REVDAT 7 24-FEB-09 4HYA 1 VERSN REVDAT 6 01-APR-03 4HYA 1 JRNL REVDAT 5 15-JUL-92 4HYA 1 FORMUL REVDAT 4 30-SEP-83 4HYA 1 REVDAT REVDAT 3 06-JAN-82 4HYA 3 ORIGX SCALE HETATM REVDAT 2 01-OCT-80 4HYA 1 REMARK REVDAT 1 28-MAR-80 4HYA 0 JRNL AUTH W.T.WINTER,S.ARNOTT JRNL TITL HYALURONIC ACID: THE ROLE OF DIVALENT CATIONS IN JRNL TITL 2 CONFORMATION AND PACKING. JRNL REF J.MOL.BIOL. V. 117 761 1977 JRNL REFN ISSN 0022-2836 JRNL PMID 609101 JRNL DOI 10.1016/0022-2836(77)90068-7 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.J.C.SMITH,S.ARNOTT REMARK 1 TITL LALS, A LINKED-ATOM LEAST-SQUARES RECIPROCAL-SPACE REMARK 1 TITL 2 REFINEMENT SYSTEM INCORPORATING STEREOCHEMICAL RESTRAINTS TO REMARK 1 TITL 3 SUPPLEMENT SPARSE DIFFRACTION DATA REMARK 1 REF ACTA CRYSTALLOGR.,SECT.A V. 34 3 1978 REMARK 1 REFN ISSN 0108-7673 REMARK 1 REFERENCE 2 REMARK 1 AUTH W.T.WINTER,P.J.C.SMITH,S.ARNOTT REMARK 1 TITL HYALURONIC ACID, STRUCTURE OF A FULLY EXTENDED 3-FOLD REMARK 1 TITL 2 HELICAL SODIUM SALT AND COMPARISON WITH THE LESS EXTENDED REMARK 1 TITL 3 4-FOLD HELICAL FORMS REMARK 1 REF J.MOL.BIOL. V. 99 219 1975 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 3 REMARK 1 AUTH J.M.GUSS,D.W.L.HUKINS,P.J.C.SMITH,W.T.WINTER,S.ARNOTT, REMARK 1 AUTH 2 R.MOORHOUSE,D.A.REES REMARK 1 TITL HYALURONIC ACID, MOLECULAR CONFORMATIONS AND INTERACTIONS IN REMARK 1 TITL 2 TWO SODIUM SALTS REMARK 1 REF J.MOL.BIOL. V. 95 384 1975 REMARK 1 REFN ISSN 0022-2836 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : LINKED-ATOM LEAST-SQUARES MODEL-BUILDING PROCEDURE REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 81 REMARK 3 SOLVENT ATOMS : 9 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4HYA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000179345. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : FIBER DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 205 REMARK 205 FIBER DIFFRACTION REMARK 205 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM FIBER REMARK 205 DIFFRACTION DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 205 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE REMARK 205 VALUES ON THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: UNKNOWN REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O1 GCU A 1 C3 NAG A 6 1554 1.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAG A 6 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 9 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GCU A 1 O6A REMARK 620 2 HOH A 12 O 80.7 REMARK 620 3 HOH A 15 O 57.7 102.4 REMARK 620 4 HOH A 18 O 55.0 74.7 112.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 8 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GCU A 3 O6A REMARK 620 2 HOH A 11 O 77.4 REMARK 620 3 HOH A 14 O 68.9 106.4 REMARK 620 4 HOH A 17 O 74.7 118.6 112.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 7 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GCU A 5 O6A REMARK 620 2 HOH A 10 O 61.6 REMARK 620 3 HOH A 13 O 117.0 171.5 REMARK 620 4 HOH A 16 O 88.5 61.2 127.2 REMARK 620 N 1 2 3 HET GCU A 1 18 HET NAG A 2 25 HET GCU A 3 17 HET NAG A 4 25 HET GCU A 5 17 HET NAG A 6 24 HET CA A 7 1 HET CA A 8 1 HET CA A 9 1 HETNAM GCU ALPHA-D-GLUCOPYRANURONIC ACID HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CA CALCIUM ION HETSYN GCU ALPHA-D-GLUCURONIC ACID; D-GLUCURONIC ACID; GLUCURONIC HETSYN 2 GCU ACID HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 1 GCU 3(C6 H10 O7) FORMUL 1 NAG 3(C8 H15 N O6) FORMUL 2 CA 3(CA 2+) FORMUL 5 HOH *9(H2 O) LINK O4 GCU A 1 C1 NAG A 2 1555 1555 1.39 LINK O3 NAG A 2 C1 GCU A 3 1555 1555 1.39 LINK O4 GCU A 3 C1 NAG A 4 1555 1555 1.39 LINK O3 NAG A 4 C1 GCU A 5 1555 1555 1.39 LINK O4 GCU A 5 C1 NAG A 6 1555 1555 1.39 LINK O6A GCU A 1 CA CA A 9 1555 1555 2.92 LINK O6A GCU A 3 CA CA A 8 1555 1555 2.51 LINK O6A GCU A 5 CA CA A 7 1555 1555 2.77 LINK CA CA A 7 O HOH A 10 1555 1555 2.55 LINK CA CA A 7 O HOH A 13 1555 1555 2.51 LINK CA CA A 7 O HOH A 16 1555 1555 2.52 LINK CA CA A 8 O HOH A 11 1555 1555 2.47 LINK CA CA A 8 O HOH A 14 1555 1555 2.57 LINK CA CA A 8 O HOH A 17 1555 1555 2.56 LINK CA CA A 9 O HOH A 12 1555 1555 2.67 LINK CA CA A 9 O HOH A 15 1555 1555 2.44 LINK CA CA A 9 O HOH A 18 1555 1555 2.52 CRYST1 20.930 20.930 28.300 90.00 90.00 120.00 P 32 1 2 18 ORIGX1 0.047778 0.027585 0.000000 0.00000 ORIGX2 0.000000 0.055170 0.000000 0.00000 ORIGX3 0.000000 0.000000 0.035336 0.00000 SCALE1 0.047778 0.027585 0.000000 0.00000 SCALE2 0.000000 0.055170 0.000000 0.00000 SCALE3 0.000000 0.000000 0.035336 0.00000 CONECT 1 2 7 11 14 CONECT 2 1 3 8 15 CONECT 3 2 4 9 16 CONECT 4 3 5 10 17 CONECT 5 4 6 11 18 CONECT 6 5 12 13 CONECT 7 1 CONECT 8 2 CONECT 9 3 CONECT 10 4 19 CONECT 11 1 5 CONECT 12 6 129 CONECT 13 6 CONECT 14 1 CONECT 15 2 CONECT 16 3 CONECT 17 4 CONECT 18 5 CONECT 19 10 20 30 33 CONECT 20 19 21 27 34 CONECT 21 20 22 28 35 CONECT 22 21 23 29 36 CONECT 23 22 24 30 37 CONECT 24 23 31 38 39 CONECT 25 26 27 32 CONECT 26 25 40 41 42 CONECT 27 20 25 43 CONECT 28 21 44 CONECT 29 22 CONECT 30 19 23 CONECT 31 24 CONECT 32 25 CONECT 33 19 CONECT 34 20 CONECT 35 21 CONECT 36 22 CONECT 37 23 CONECT 38 24 CONECT 39 24 CONECT 40 26 CONECT 41 26 CONECT 42 26 CONECT 43 27 CONECT 44 28 45 53 56 CONECT 45 44 46 50 57 CONECT 46 45 47 51 58 CONECT 47 46 48 52 59 CONECT 48 47 49 53 60 CONECT 49 48 54 55 CONECT 50 45 CONECT 51 46 CONECT 52 47 61 CONECT 53 44 48 CONECT 54 49 128 CONECT 55 49 CONECT 56 44 CONECT 57 45 CONECT 58 46 CONECT 59 47 CONECT 60 48 CONECT 61 52 62 72 75 CONECT 62 61 63 69 76 CONECT 63 62 64 70 77 CONECT 64 63 65 71 78 CONECT 65 64 66 72 79 CONECT 66 65 73 80 81 CONECT 67 68 69 74 CONECT 68 67 82 83 84 CONECT 69 62 67 85 CONECT 70 63 86 CONECT 71 64 CONECT 72 61 65 CONECT 73 66 CONECT 74 67 CONECT 75 61 CONECT 76 62 CONECT 77 63 CONECT 78 64 CONECT 79 65 CONECT 80 66 CONECT 81 66 CONECT 82 68 CONECT 83 68 CONECT 84 68 CONECT 85 69 CONECT 86 70 87 95 98 CONECT 87 86 88 92 99 CONECT 88 87 89 93 100 CONECT 89 88 90 94 101 CONECT 90 89 91 95 102 CONECT 91 90 96 97 CONECT 92 87 CONECT 93 88 CONECT 94 89 103 CONECT 95 86 90 CONECT 96 91 127 CONECT 97 91 CONECT 98 86 CONECT 99 87 CONECT 100 88 CONECT 101 89 CONECT 102 90 CONECT 103 94 104 113 116 CONECT 104 103 105 111 117 CONECT 105 104 106 118 CONECT 106 105 107 112 119 CONECT 107 106 108 113 120 CONECT 108 107 114 121 122 CONECT 109 110 111 115 CONECT 110 109 123 124 125 CONECT 111 104 109 126 CONECT 112 106 CONECT 113 103 107 CONECT 114 108 CONECT 115 109 CONECT 116 103 CONECT 117 104 CONECT 118 105 CONECT 119 106 CONECT 120 107 CONECT 121 108 CONECT 122 108 CONECT 123 110 CONECT 124 110 CONECT 125 110 CONECT 126 111 CONECT 127 96 130 133 136 CONECT 128 54 131 134 137 CONECT 129 12 132 135 138 CONECT 130 127 CONECT 131 128 CONECT 132 129 CONECT 133 127 CONECT 134 128 CONECT 135 129 CONECT 136 127 CONECT 137 128 CONECT 138 129 MASTER 245 0 9 0 0 0 0 6 90 0 138 0 END