HEADER HYDROLASE/HYDROLASE INHIBITOR 16-NOV-12 4HZZ TITLE CRYSTAL STRUCTURE OF INFLUENZA NEURAMINIDASE N3-H274Y COMPLEXED WITH TITLE 2 OSELTAMIVIR COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEURAMINIDASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 83-469; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 3 ORGANISM_TAXID: 489926; SOURCE 4 CELL: HI5; SOURCE 5 GENE: NA KEYWDS NEURAMINIDASE, HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Q.LI,J.QI,C.J.VAVRICKA,G.F.GAO REVDAT 4 09-OCT-24 4HZZ 1 REMARK REVDAT 3 08-NOV-23 4HZZ 1 HETSYN REVDAT 2 29-JUL-20 4HZZ 1 COMPND REMARK SEQADV HETNAM REVDAT 2 2 1 LINK SITE ATOM REVDAT 1 06-NOV-13 4HZZ 0 JRNL AUTH Q.LI,J.QI,Y.WU,H.KIYOTA,K.TANAKA,Y.SUHARA,H.OHRUI,Y.SUZUKI, JRNL AUTH 2 C.J.VAVRICKA,G.F.GAO JRNL TITL FUNCTIONAL AND STRUCTURAL ANALYSIS OF INFLUENZA VIRUS JRNL TITL 2 NEURAMINIDASE N3 OFFERS FURTHER INSIGHT INTO THE MECHANISMS JRNL TITL 3 OF OSELTAMIVIR RESISTANCE. JRNL REF J.VIROL. V. 87 10016 2013 JRNL REFN ISSN 0022-538X JRNL PMID 23824808 JRNL DOI 10.1128/JVI.01129-13 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.5_2) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.19 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.150 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 46695 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.139 REMARK 3 R VALUE (WORKING SET) : 0.138 REMARK 3 FREE R VALUE : 0.165 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 2363 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.1961 - 4.1131 0.97 2649 132 0.1431 0.1506 REMARK 3 2 4.1131 - 3.2655 0.97 2576 149 0.1291 0.1619 REMARK 3 3 3.2655 - 2.8530 1.00 2650 123 0.1465 0.1673 REMARK 3 4 2.8530 - 2.5922 1.00 2658 132 0.1515 0.1770 REMARK 3 5 2.5922 - 2.4065 1.00 2643 146 0.1443 0.1783 REMARK 3 6 2.4065 - 2.2646 1.00 2638 146 0.1361 0.1617 REMARK 3 7 2.2646 - 2.1512 1.00 2625 144 0.1317 0.1674 REMARK 3 8 2.1512 - 2.0576 1.00 2646 138 0.1295 0.1563 REMARK 3 9 2.0576 - 1.9784 0.99 2582 160 0.1272 0.1494 REMARK 3 10 1.9784 - 1.9101 0.99 2616 128 0.1318 0.1886 REMARK 3 11 1.9101 - 1.8504 0.99 2624 147 0.1282 0.1500 REMARK 3 12 1.8504 - 1.7975 0.99 2587 131 0.1215 0.1663 REMARK 3 13 1.7975 - 1.7502 0.99 2597 143 0.1158 0.1600 REMARK 3 14 1.7502 - 1.7075 0.98 2585 141 0.1206 0.1484 REMARK 3 15 1.7075 - 1.6687 0.98 2573 136 0.1219 0.1623 REMARK 3 16 1.6687 - 1.6332 0.97 2542 136 0.1228 0.1462 REMARK 3 17 1.6332 - 1.6005 0.96 2541 131 0.1291 0.1666 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 34.29 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 14.010 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.83090 REMARK 3 B22 (A**2) : -0.83090 REMARK 3 B33 (A**2) : 1.66190 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3231 REMARK 3 ANGLE : 1.191 4385 REMARK 3 CHIRALITY : 0.085 475 REMARK 3 PLANARITY : 0.005 562 REMARK 3 DIHEDRAL : 23.164 1205 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 83:165) REMARK 3 ORIGIN FOR THE GROUP (A): -0.127 17.474 30.902 REMARK 3 T TENSOR REMARK 3 T11: 0.0817 T22: 0.0743 REMARK 3 T33: 0.0717 T12: -0.0031 REMARK 3 T13: 0.0019 T23: -0.0072 REMARK 3 L TENSOR REMARK 3 L11: 0.2487 L22: 0.1327 REMARK 3 L33: 0.1335 L12: -0.0205 REMARK 3 L13: -0.0335 L23: 0.0165 REMARK 3 S TENSOR REMARK 3 S11: 0.0000 S12: 0.0167 S13: 0.0191 REMARK 3 S21: -0.0149 S22: 0.0084 S23: -0.0151 REMARK 3 S31: -0.0180 S32: 0.0020 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 166:201) REMARK 3 ORIGIN FOR THE GROUP (A): 10.355 17.585 26.641 REMARK 3 T TENSOR REMARK 3 T11: 0.1179 T22: 0.0916 REMARK 3 T33: 0.1376 T12: -0.0090 REMARK 3 T13: 0.0164 T23: 0.0045 REMARK 3 L TENSOR REMARK 3 L11: 0.1245 L22: 0.0724 REMARK 3 L33: 0.0666 L12: -0.0429 REMARK 3 L13: 0.0351 L23: -0.0784 REMARK 3 S TENSOR REMARK 3 S11: 0.0288 S12: 0.0457 S13: 0.1371 REMARK 3 S21: 0.0045 S22: 0.0216 S23: -0.0642 REMARK 3 S31: -0.0489 S32: 0.0357 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 202:326) REMARK 3 ORIGIN FOR THE GROUP (A): 8.758 33.812 22.314 REMARK 3 T TENSOR REMARK 3 T11: 0.1121 T22: 0.0823 REMARK 3 T33: 0.1362 T12: 0.0057 REMARK 3 T13: 0.0115 T23: 0.0058 REMARK 3 L TENSOR REMARK 3 L11: 0.2926 L22: 0.1154 REMARK 3 L33: 0.1102 L12: -0.0082 REMARK 3 L13: 0.0093 L23: 0.0439 REMARK 3 S TENSOR REMARK 3 S11: 0.0065 S12: 0.0093 S13: 0.1427 REMARK 3 S21: 0.0014 S22: 0.0134 S23: 0.0216 REMARK 3 S31: -0.0656 S32: -0.0130 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 327:390) REMARK 3 ORIGIN FOR THE GROUP (A): -7.540 41.612 29.209 REMARK 3 T TENSOR REMARK 3 T11: 0.0908 T22: 0.0854 REMARK 3 T33: 0.0794 T12: 0.0084 REMARK 3 T13: 0.0062 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 0.2374 L22: 0.1514 REMARK 3 L33: 0.0184 L12: 0.1132 REMARK 3 L13: -0.0110 L23: -0.0309 REMARK 3 S TENSOR REMARK 3 S11: -0.0012 S12: -0.0029 S13: 0.0603 REMARK 3 S21: 0.0009 S22: 0.0121 S23: 0.0249 REMARK 3 S31: -0.0122 S32: -0.0035 S33: -0.0007 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4HZZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-NOV-12. REMARK 100 THE DEPOSITION ID IS D_1000076131. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-FEB-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46695 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2BAT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20MM TRIS, PH 8.0, 50MM NACL, 0.1M BIS REMARK 280 -TRIS PROPANE (PH 9.0), 10% V/V JEFFAMINE ED-2001 (PH 7.0), REMARK 280 VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 54.05650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 54.05650 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 31.11300 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 54.05650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 54.05650 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 31.11300 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 54.05650 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 54.05650 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 31.11300 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 54.05650 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 54.05650 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 31.11300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 21490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 47120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CA CA A 508 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 686 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 896 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1052 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1058 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA A 414 O HOH A 1071 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ALA A 414 CB - CA - C ANGL. DEV. = 34.1 DEGREES REMARK 500 LYS A 415 N - CA - CB ANGL. DEV. = -18.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 100 -84.97 -112.05 REMARK 500 ASP A 125 -159.68 -111.73 REMARK 500 ASP A 200 43.98 -163.24 REMARK 500 ASP A 221 80.70 -153.66 REMARK 500 THR A 225 -159.54 -138.89 REMARK 500 ALA A 246 98.61 -63.64 REMARK 500 ALA A 247 40.78 104.64 REMARK 500 ASN A 248 39.05 177.23 REMARK 500 SER A 249 82.02 75.53 REMARK 500 LYS A 272A -60.72 -121.56 REMARK 500 ILE A 284 -68.36 67.76 REMARK 500 CYS A 291 -164.26 -124.78 REMARK 500 TRP A 295 -51.15 -133.13 REMARK 500 ASN A 306 -165.78 -119.91 REMARK 500 SER A 319 123.87 -36.51 REMARK 500 SER A 332 -150.97 -118.52 REMARK 500 SER A 404 -131.26 -119.17 REMARK 500 ALA A 414 -110.39 -90.94 REMARK 500 ASP A 450 42.97 -85.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 507 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 293 O REMARK 620 2 GLY A 297 O 95.1 REMARK 620 3 ASP A 324 OD2 89.7 101.9 REMARK 620 4 GLY A 345 O 86.8 100.4 157.7 REMARK 620 5 HOH A 617 O 159.8 103.5 94.0 82.2 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3CL0 RELATED DB: PDB REMARK 900 N1 NEURAMINIDASE H274Y + OSELTAMIVIR REMARK 900 RELATED ID: 4HZV RELATED DB: PDB REMARK 900 RELATED ID: 4HZW RELATED DB: PDB REMARK 900 RELATED ID: 4HZX RELATED DB: PDB REMARK 900 RELATED ID: 4HZY RELATED DB: PDB REMARK 900 RELATED ID: 4I00 RELATED DB: PDB DBREF 4HZZ A 83 469 UNP A9YN63 A9YN63_9INFA 83 469 SEQADV 4HZZ TYR A 274 UNP A9YN63 HIS 276 ENGINEERED MUTATION SEQRES 1 A 387 ARG PRO PHE LYS SER PRO LEU PRO LEU CYS PRO PHE ARG SEQRES 2 A 387 GLY PHE PHE PRO PHE HIS LYS ASP ASN ALA ILE ARG LEU SEQRES 3 A 387 GLY GLU ASN LYS ASP VAL ILE VAL THR ARG GLU PRO TYR SEQRES 4 A 387 VAL SER CYS ASP ASN ASP ASN CYS TRP SER PHE ALA LEU SEQRES 5 A 387 ALA GLN GLY ALA LEU LEU GLY THR LYS HIS SER ASN GLY SEQRES 6 A 387 THR ILE LYS ASP ARG THR PRO TYR ARG SER LEU ILE ARG SEQRES 7 A 387 PHE PRO ILE GLY THR ALA PRO VAL LEU GLY ASN TYR LYS SEQRES 8 A 387 GLU ILE CYS ILE ALA TRP SER SER SER SER CYS PHE ASP SEQRES 9 A 387 GLY LYS GLU TRP MET HIS VAL CYS MET THR GLY ASN ASP SEQRES 10 A 387 ASN ASP ALA SER ALA GLN ILE ILE TYR GLY GLY ARG MET SEQRES 11 A 387 THR ASP SER ILE LYS SER TRP ARG LYS ASP ILE LEU ARG SEQRES 12 A 387 THR GLN GLU SER GLU CYS GLN CYS ILE ASP GLY THR CYS SEQRES 13 A 387 VAL VAL ALA VAL THR ASP GLY PRO ALA ALA ASN SER ALA SEQRES 14 A 387 ASP TYR ARG VAL TYR TRP ILE ARG GLU GLY LYS ILE ILE SEQRES 15 A 387 LYS TYR GLU ASN VAL PRO LYS THR LYS ILE GLN TYR LEU SEQRES 16 A 387 GLU GLU CYS SER CYS TYR VAL ASP ILE ASP VAL TYR CYS SEQRES 17 A 387 ILE CYS ARG ASP ASN TRP LYS GLY SER ASN ARG PRO TRP SEQRES 18 A 387 MET ARG ILE ASN ASN GLU THR ILE LEU GLU THR GLY TYR SEQRES 19 A 387 VAL CYS SER LYS PHE HIS SER ASP THR PRO ARG PRO ALA SEQRES 20 A 387 ASP PRO SER THR MET SER CYS ASP SER PRO SER ASN VAL SEQRES 21 A 387 ASN GLY GLY PRO GLY VAL LYS GLY PHE GLY PHE LYS ALA SEQRES 22 A 387 GLY ASP ASP VAL TRP LEU GLY ARG THR VAL SER THR SER SEQRES 23 A 387 GLY ARG SER GLY PHE GLU ILE ILE LYS VAL THR GLU GLY SEQRES 24 A 387 TRP ILE ASN SER PRO ASN HIS VAL LYS SER ILE THR GLN SEQRES 25 A 387 THR LEU VAL SER ASN ASN ASP TRP SER GLY TYR SER GLY SEQRES 26 A 387 SER PHE ILE VAL LYS ALA LYS ASP CYS PHE GLN PRO CYS SEQRES 27 A 387 PHE TYR VAL GLU LEU ILE ARG GLY ARG PRO ASN LYS ASN SEQRES 28 A 387 ASP ASP VAL SER TRP THR SER ASN SER ILE VAL THR PHE SEQRES 29 A 387 CYS GLY LEU ASP ASN GLU PRO GLY SER GLY ASN TRP PRO SEQRES 30 A 387 ASP GLY SER ASN ILE GLY PHE MET PRO LYS MODRES 4HZZ ASN A 307 ASN GLYCOSYLATION SITE MODRES 4HZZ ASN A 146 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET FUC B 3 10 HET NAG C 1 14 HET NAG C 2 14 HET FUC C 3 10 HET CA A 507 1 HET CA A 508 1 HET G39 A 509 20 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM CA CALCIUM ION HETNAM G39 (3R,4R,5S)-4-(ACETYLAMINO)-5-AMINO-3-(PENTAN-3-YLOXY) HETNAM 2 G39 CYCLOHEX-1-ENE-1-CARBOXYLIC ACID HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN G39 OSELTAMIVIR CARBOXYLATE FORMUL 2 NAG 4(C8 H15 N O6) FORMUL 2 FUC 2(C6 H12 O5) FORMUL 4 CA 2(CA 2+) FORMUL 6 G39 C14 H24 N2 O4 FORMUL 7 HOH *490(H2 O) HELIX 1 1 ILE A 106 GLU A 110 5 5 HELIX 2 2 THR A 142 ASN A 146 5 5 HELIX 3 3 ASN A 463 MET A 467 5 5 SHEET 1 A 4 GLY A 96 LYS A 102 0 SHEET 2 A 4 THR A 439 LEU A 449 -1 O THR A 445 N PHE A 100 SHEET 3 A 4 PHE A 418 GLY A 429 -1 N PRO A 420 O GLY A 448 SHEET 4 A 4 SER A 407 LYS A 413 -1 N VAL A 412 O GLN A 419 SHEET 1 B 4 ILE A 115 CYS A 124 0 SHEET 2 B 4 CYS A 129 LEU A 139 -1 O PHE A 132 N TYR A 121 SHEET 3 B 4 SER A 157 PRO A 162 -1 O SER A 157 N ALA A 135 SHEET 4 B 4 LYS A 172 ILE A 176 -1 O ILE A 174 N LEU A 158 SHEET 1 C 4 SER A 179 PHE A 184 0 SHEET 2 C 4 TRP A 189 THR A 195 -1 O MET A 190 N CYS A 183 SHEET 3 C 4 SER A 202 TYR A 207 -1 O GLN A 204 N CYS A 193 SHEET 4 C 4 ARG A 210 LYS A 216 -1 O ARG A 210 N TYR A 207 SHEET 1 D 3 ARG A 224 THR A 225 0 SHEET 2 D 3 THR A 236 ASP A 243 -1 O THR A 242 N ARG A 224 SHEET 3 D 3 GLN A 231 ILE A 233 -1 N GLN A 231 O VAL A 238 SHEET 1 E 4 ARG A 224 THR A 225 0 SHEET 2 E 4 THR A 236 ASP A 243 -1 O THR A 242 N ARG A 224 SHEET 3 E 4 ASP A 251 ARG A 258 -1 O ILE A 257 N CYS A 237 SHEET 4 E 4 LYS A 261 ASN A 267 -1 O ILE A 263 N TRP A 256 SHEET 1 F 4 GLU A 276 VAL A 282 0 SHEET 2 F 4 VAL A 287 ARG A 292 -1 O ILE A 290 N SER A 279 SHEET 3 F 4 PRO A 301 ILE A 305 -1 O PRO A 301 N CYS A 291 SHEET 4 F 4 ILE A 311 TYR A 316 -1 O GLY A 315 N TRP A 302 SHEET 1 G 4 GLY A 353 ALA A 356 0 SHEET 2 G 4 ASP A 359 ARG A 364 -1 O TRP A 361 N PHE A 354 SHEET 3 G 4 SER A 372 VAL A 379 -1 O VAL A 379 N VAL A 360 SHEET 4 G 4 LYS A 391 TRP A 403 -1 O GLN A 395 N ILE A 376 SSBOND 1 CYS A 92 CYS A 417 1555 1555 2.06 SSBOND 2 CYS A 124 CYS A 129 1555 1555 2.05 SSBOND 3 CYS A 175 CYS A 193 1555 1555 2.02 SSBOND 4 CYS A 183 CYS A 230 1555 1555 2.03 SSBOND 5 CYS A 232 CYS A 237 1555 1555 2.05 SSBOND 6 CYS A 278 CYS A 291 1555 1555 2.06 SSBOND 7 CYS A 280 CYS A 289 1555 1555 2.05 SSBOND 8 CYS A 318 CYS A 337 1555 1555 2.05 SSBOND 9 CYS A 421 CYS A 447 1555 1555 2.06 LINK ND2 ASN A 146 C1 NAG B 1 1555 1555 1.45 LINK ND2 ASN A 307 C1 NAG C 1 1555 1555 1.45 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.44 LINK O6 NAG B 1 C1 FUC B 3 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O6 NAG C 1 C1 FUC C 3 1555 1555 1.44 LINK O ASP A 293 CA CA A 507 1555 1555 2.29 LINK O GLY A 297 CA CA A 507 1555 1555 2.35 LINK OD2 ASP A 324 CA CA A 507 1555 1555 2.36 LINK O GLY A 345 CA CA A 507 1555 1555 2.44 LINK CA CA A 507 O HOH A 617 1555 1555 2.42 LINK CA CA A 508 O HOH A 835 1555 1555 2.49 CISPEP 1 THR A 325 PRO A 326 0 3.21 CISPEP 2 ASP A 330 PRO A 331 0 -7.64 CISPEP 3 GLY A 346 PRO A 347 0 3.89 CISPEP 4 ARG A 430 PRO A 431 0 5.23 CRYST1 108.113 108.113 62.226 90.00 90.00 90.00 I 4 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009250 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009250 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016070 0.00000