HEADER HYDROLASE 20-NOV-12 4I19 TITLE THE CRYSTAL STRUCTURE OF AN EPOXIDE HYDROLASE FROM STREPTOMYCES TITLE 2 CARZINOSTATICUS SUBSP. NEOCARZINOSTATICUS. COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPOXIDE HYDROLASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES CARZINOSTATICUS SUBSP. SOURCE 3 NEOCARZINOSTATICUS; SOURCE 4 ORGANISM_TAXID: 167636; SOURCE 5 STRAIN: SUBSP. NEOCARZINOSTATICUS; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, ENZYME DISCOVERY FOR KEYWDS 3 NATURAL PRODUCT BIOSYNTHESI, NATPRO, ENZYME DISCOVERY FOR NATURAL KEYWDS 4 PRODUCT BIOSYNTHESIS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,L.BIGELOW,S.CLANCY,G.BABNIGG,C.A.BINGMAN,R.YENNAMALLI,J.LOHMAN, AUTHOR 2 M.MA,B.SHEN,G.N.PHILLIPS JR.,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 3 STRUCTURAL GENOMICS (MCSG),ENZYME DISCOVERY FOR NATURAL PRODUCT AUTHOR 4 BIOSYNTHESIS (NATPRO) REVDAT 4 16-OCT-24 4I19 1 REMARK SEQADV LINK REVDAT 3 30-JAN-13 4I19 1 AUTHOR REVDAT 2 16-JAN-13 4I19 1 REVDAT 1 05-DEC-12 4I19 0 JRNL AUTH K.TAN,L.BIGELOW,S.CLANCY,G.BABNIGG,C.A.BINGMAN,R.YENNAMALLI, JRNL AUTH 2 J.LOHMAN,M.MA,B.SHEN,G.N.PHILLIPS JR.,A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF AN EPOXIDE HYDROLASE FROM JRNL TITL 2 STREPTOMYCES CARZINOSTATICUS SUBSP. NEOCARZINOSTATICUS. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.26 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 26457 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 1335 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.2662 - 4.6245 1.00 2735 133 0.1522 0.1749 REMARK 3 2 4.6245 - 3.6721 0.99 2566 131 0.1263 0.1459 REMARK 3 3 3.6721 - 3.2084 1.00 2508 146 0.1622 0.2131 REMARK 3 4 3.2084 - 2.9152 1.00 2487 146 0.1936 0.2613 REMARK 3 5 2.9152 - 2.7064 1.00 2499 144 0.1933 0.3006 REMARK 3 6 2.7064 - 2.5469 1.00 2475 135 0.1807 0.2369 REMARK 3 7 2.5469 - 2.4194 1.00 2519 128 0.1744 0.2105 REMARK 3 8 2.4194 - 2.3141 1.00 2473 118 0.1714 0.2363 REMARK 3 9 2.3141 - 2.2250 1.00 2457 138 0.1881 0.2747 REMARK 3 10 2.2250 - 2.1482 0.97 2403 116 0.1889 0.2325 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.72 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 34.85 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.500 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.710 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -7.75380 REMARK 3 B22 (A**2) : -7.75380 REMARK 3 B33 (A**2) : 15.50750 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3145 REMARK 3 ANGLE : 1.040 4269 REMARK 3 CHIRALITY : 0.066 460 REMARK 3 PLANARITY : 0.005 558 REMARK 3 DIHEDRAL : 13.685 1134 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 0:21) REMARK 3 ORIGIN FOR THE GROUP (A): 27.0171 -7.5907 51.1158 REMARK 3 T TENSOR REMARK 3 T11: 0.3062 T22: 0.3663 REMARK 3 T33: 0.4822 T12: 0.0565 REMARK 3 T13: -0.0747 T23: -0.0602 REMARK 3 L TENSOR REMARK 3 L11: 1.6819 L22: 5.9088 REMARK 3 L33: 6.8951 L12: 0.3821 REMARK 3 L13: 1.3260 L23: 6.1366 REMARK 3 S TENSOR REMARK 3 S11: 0.1554 S12: 0.2361 S13: -0.2985 REMARK 3 S21: 0.6337 S22: 0.4670 S23: -0.5294 REMARK 3 S31: 0.8212 S32: 0.8157 S33: -0.6489 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 22:51) REMARK 3 ORIGIN FOR THE GROUP (A): 17.5161 -5.7175 29.5548 REMARK 3 T TENSOR REMARK 3 T11: 0.3052 T22: 0.3783 REMARK 3 T33: 0.2966 T12: -0.0127 REMARK 3 T13: 0.0427 T23: -0.0949 REMARK 3 L TENSOR REMARK 3 L11: 3.7415 L22: 2.3844 REMARK 3 L33: 2.5176 L12: 0.6833 REMARK 3 L13: 2.2674 L23: 0.4165 REMARK 3 S TENSOR REMARK 3 S11: 0.0769 S12: 0.5173 S13: -0.1786 REMARK 3 S21: -0.1819 S22: 0.0738 S23: -0.4061 REMARK 3 S31: 0.0694 S32: 0.5207 S33: -0.2201 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 52:162) REMARK 3 ORIGIN FOR THE GROUP (A): 23.0125 10.4304 56.5378 REMARK 3 T TENSOR REMARK 3 T11: 0.1846 T22: 0.2660 REMARK 3 T33: 0.2309 T12: 0.0087 REMARK 3 T13: -0.0201 T23: -0.0578 REMARK 3 L TENSOR REMARK 3 L11: 1.6274 L22: 2.1630 REMARK 3 L33: 0.9129 L12: 0.5339 REMARK 3 L13: 0.7590 L23: 0.4961 REMARK 3 S TENSOR REMARK 3 S11: 0.0715 S12: -0.0123 S13: -0.0898 REMARK 3 S21: 0.1344 S22: -0.0234 S23: -0.0845 REMARK 3 S31: 0.0336 S32: 0.0341 S33: -0.0318 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 163:230) REMARK 3 ORIGIN FOR THE GROUP (A): 6.0107 20.9202 50.2570 REMARK 3 T TENSOR REMARK 3 T11: 0.2140 T22: 0.1913 REMARK 3 T33: 0.3008 T12: -0.0099 REMARK 3 T13: 0.0213 T23: -0.0252 REMARK 3 L TENSOR REMARK 3 L11: 2.8158 L22: 1.8846 REMARK 3 L33: 3.1736 L12: -0.2511 REMARK 3 L13: 1.2648 L23: -0.5440 REMARK 3 S TENSOR REMARK 3 S11: -0.0207 S12: -0.0560 S13: 0.1612 REMARK 3 S21: -0.0985 S22: 0.1012 S23: 0.1126 REMARK 3 S31: -0.1648 S32: -0.1096 S33: -0.0253 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 231:339) REMARK 3 ORIGIN FOR THE GROUP (A): 10.2374 6.1107 44.3114 REMARK 3 T TENSOR REMARK 3 T11: 0.2646 T22: 0.2809 REMARK 3 T33: 0.2251 T12: -0.0055 REMARK 3 T13: -0.0349 T23: -0.0567 REMARK 3 L TENSOR REMARK 3 L11: 1.2200 L22: 0.9240 REMARK 3 L33: 0.1711 L12: -0.0295 REMARK 3 L13: 0.1125 L23: -0.0954 REMARK 3 S TENSOR REMARK 3 S11: 0.0266 S12: 0.0547 S13: -0.0360 REMARK 3 S21: -0.0495 S22: 0.0489 S23: -0.0808 REMARK 3 S31: 0.0263 S32: 0.0397 S33: -0.0843 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 340:385) REMARK 3 ORIGIN FOR THE GROUP (A): 15.6199 26.1218 47.9677 REMARK 3 T TENSOR REMARK 3 T11: 0.2733 T22: 0.2559 REMARK 3 T33: 0.3319 T12: -0.0473 REMARK 3 T13: 0.0128 T23: -0.0311 REMARK 3 L TENSOR REMARK 3 L11: 3.6493 L22: 2.0816 REMARK 3 L33: 1.3731 L12: -0.6412 REMARK 3 L13: 0.1575 L23: 0.3642 REMARK 3 S TENSOR REMARK 3 S11: 0.0659 S12: 0.0428 S13: 0.4137 REMARK 3 S21: -0.0844 S22: -0.0463 S23: -0.1229 REMARK 3 S31: -0.2477 S32: 0.0764 S33: -0.0308 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4I19 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-NOV-12. REMARK 100 THE DEPOSITION ID IS D_1000076177. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-APR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : SI 111 CRYSTAL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26537 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.148 REMARK 200 RESOLUTION RANGE LOW (A) : 33.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 9.200 REMARK 200 R MERGE (I) : 0.12200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 31.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.19 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.30 REMARK 200 R MERGE FOR SHELL (I) : 0.60400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, MLPHARE, HKL-3000, DM REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.4M SODIUM MALONATE, 0.1M BIS-TRIS REMARK 280 PROPANE:NAOH, PH 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.63150 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 38.00550 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 38.00550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 40.31575 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 38.00550 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 38.00550 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 120.94725 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 38.00550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 38.00550 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 40.31575 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 38.00550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 38.00550 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 120.94725 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 80.63150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: EXPERIMENTALLY UNKNONW. THE CHAIN A MAY FORM A DIMER WITH REMARK 300 IT SYMMETRY-RELATED MOLECULE THORUGH THE OPERATOR (-Y,-X,-Z+1/2). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 80.63150 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 523 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 143 NZ REMARK 470 LYS A 158 NZ REMARK 470 GLU A 211 CG CD OE1 OE2 REMARK 470 GLU A 271 CD OE1 OE2 REMARK 470 LYS A 307 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 145 -155.36 -97.14 REMARK 500 ASP A 174 -125.49 61.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 412 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC109144 RELATED DB: TARGETTRACK DBREF 4I19 A 1 385 UNP Q84HB8 Q84HB8_STRCZ 1 385 SEQADV 4I19 SER A -2 UNP Q84HB8 EXPRESSION TAG SEQADV 4I19 ASN A -1 UNP Q84HB8 EXPRESSION TAG SEQADV 4I19 ALA A 0 UNP Q84HB8 EXPRESSION TAG SEQRES 1 A 388 SER ASN ALA MSE ARG PRO PHE GLN VAL GLN ILE PRO GLN SEQRES 2 A 388 ALA ASP ILE ASP ASP LEU LYS ARG ARG LEU SER GLU THR SEQRES 3 A 388 ARG TRP PRO GLU LEU VAL ASP VAL GLY TRP SER ARG GLY SEQRES 4 A 388 ALA PRO LEU SER TYR ILE LYS GLU LEU ALA GLU TYR TRP SEQRES 5 A 388 ARG ASP GLY PHE ASP TRP ARG ALA ALA GLU ARG ARG ILE SEQRES 6 A 388 ASN GLN TYR PRO GLN PHE THR THR GLU ILE ASP GLY ALA SEQRES 7 A 388 THR ILE HIS PHE LEU HIS VAL ARG SER PRO GLU PRO ASP SEQRES 8 A 388 ALA THR PRO MSE VAL ILE THR HIS GLY TRP PRO GLY THR SEQRES 9 A 388 PRO VAL GLU PHE LEU ASP ILE ILE GLY PRO LEU THR ASP SEQRES 10 A 388 PRO ARG ALA HIS GLY GLY ASP PRO ALA ASP ALA PHE HIS SEQRES 11 A 388 LEU VAL ILE PRO SER LEU PRO GLY PHE GLY LEU SER GLY SEQRES 12 A 388 PRO LEU LYS SER ALA GLY TRP GLU LEU GLY ARG ILE ALA SEQRES 13 A 388 MSE ALA TRP SER LYS LEU MSE ALA SER LEU GLY TYR GLU SEQRES 14 A 388 ARG TYR ILE ALA GLN GLY GLY ASP ILE GLY ALA PHE THR SEQRES 15 A 388 SER LEU LEU LEU GLY ALA ILE ASP PRO SER HIS LEU ALA SEQRES 16 A 388 GLY ILE HIS VAL ASN LEU LEU GLN THR ASN LEU SER GLY SEQRES 17 A 388 GLU PRO GLY GLU LEU GLU THR LEU SER ASP ALA ASP LYS SEQRES 18 A 388 ALA ARG LEU ALA VAL SER GLU ARG PHE LEU ASP ASP LEU SEQRES 19 A 388 SER GLY PRO MSE LYS MSE GLN SER THR ARG PRO HIS THR SEQRES 20 A 388 ILE GLY TYR MSE LEU ASN ASP SER PRO VAL ALA GLN LEU SEQRES 21 A 388 ALA TYR LEU LEU GLU MSE PHE LYS HIS TRP ALA GLN THR SEQRES 22 A 388 GLU ASN VAL PRO GLU ASP ALA VAL ASP ARG ASP LEU MSE SEQRES 23 A 388 LEU THR HIS ILE SER LEU PHE TRP PHE THR ALA THR GLY SEQRES 24 A 388 GLY SER ALA ALA GLN ALA HIS TYR GLU LEU LYS PRO PHE SEQRES 25 A 388 LEU PRO ILE THR SER LEU ILE GLY ARG SER PRO THR LEU SEQRES 26 A 388 ASP VAL PRO MSE GLY VAL ALA VAL TYR PRO GLY ALA LEU SEQRES 27 A 388 PHE GLN PRO VAL ARG SER LEU ALA GLU ARG ASP PHE LYS SEQRES 28 A 388 GLN ILE VAL HIS TRP ALA GLU LEU ASP ARG GLY GLY HIS SEQRES 29 A 388 PHE SER ALA MSE GLU GLU PRO ASP LEU PHE VAL ASP ASP SEQRES 30 A 388 LEU ARG THR PHE ASN ARG THR LEU LYS LYS LEU MODRES 4I19 MSE A 1 MET SELENOMETHIONINE MODRES 4I19 MSE A 92 MET SELENOMETHIONINE MODRES 4I19 MSE A 154 MET SELENOMETHIONINE MODRES 4I19 MSE A 160 MET SELENOMETHIONINE MODRES 4I19 MSE A 235 MET SELENOMETHIONINE MODRES 4I19 MSE A 237 MET SELENOMETHIONINE MODRES 4I19 MSE A 248 MET SELENOMETHIONINE MODRES 4I19 MSE A 263 MET SELENOMETHIONINE MODRES 4I19 MSE A 283 MET SELENOMETHIONINE MODRES 4I19 MSE A 326 MET SELENOMETHIONINE MODRES 4I19 MSE A 365 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 92 8 HET MSE A 154 8 HET MSE A 160 8 HET MSE A 235 8 HET MSE A 237 8 HET MSE A 248 8 HET MSE A 263 8 HET MSE A 283 8 HET MSE A 326 8 HET MSE A 365 8 HET ACT A 401 4 HET ACT A 402 4 HET FMT A 403 3 HET FMT A 404 3 HET FMT A 405 3 HET FMT A 406 3 HET FMT A 407 3 HET FMT A 408 3 HET FMT A 409 3 HET FMT A 410 3 HET FMT A 411 3 HET FMT A 412 3 HETNAM MSE SELENOMETHIONINE HETNAM ACT ACETATE ION HETNAM FMT FORMIC ACID FORMUL 1 MSE 11(C5 H11 N O2 SE) FORMUL 2 ACT 2(C2 H3 O2 1-) FORMUL 4 FMT 10(C H2 O2) FORMUL 14 HOH *191(H2 O) HELIX 1 1 PRO A 9 GLU A 22 1 14 HELIX 2 2 PRO A 38 GLY A 52 1 15 HELIX 3 3 ASP A 54 GLN A 64 1 11 HELIX 4 4 THR A 101 GLU A 104 5 4 HELIX 5 5 PHE A 105 ASP A 114 1 10 HELIX 6 6 PRO A 115 GLY A 119 5 5 HELIX 7 7 ASP A 121 ASP A 124 5 4 HELIX 8 8 PHE A 136 GLY A 140 5 5 HELIX 9 9 GLU A 148 LEU A 163 1 16 HELIX 10 10 ASP A 174 ASP A 187 1 14 HELIX 11 11 GLU A 206 LEU A 213 5 8 HELIX 12 12 SER A 214 VAL A 223 1 10 HELIX 13 13 VAL A 223 LEU A 231 1 9 HELIX 14 14 SER A 232 SER A 239 1 8 HELIX 15 15 ARG A 241 ASP A 251 1 11 HELIX 16 16 SER A 252 TRP A 267 1 16 HELIX 17 17 VAL A 273 ALA A 277 5 5 HELIX 18 18 ASP A 279 ALA A 294 1 16 HELIX 19 19 THR A 295 LEU A 306 1 12 HELIX 20 20 LYS A 307 LEU A 310 5 4 HELIX 21 21 VAL A 339 PHE A 347 1 9 HELIX 22 22 PHE A 362 GLU A 367 1 6 HELIX 23 23 GLU A 367 LEU A 385 1 19 SHEET 1 A 9 ARG A 2 PHE A 4 0 SHEET 2 A 9 GLN A 67 ILE A 72 -1 O THR A 69 N ARG A 2 SHEET 3 A 9 ALA A 75 VAL A 82 -1 O ILE A 77 N THR A 70 SHEET 4 A 9 PHE A 126 PRO A 131 -1 O LEU A 128 N VAL A 82 SHEET 5 A 9 THR A 90 THR A 95 1 N MSE A 92 O VAL A 129 SHEET 6 A 9 TYR A 168 GLY A 172 1 O GLN A 171 N VAL A 93 SHEET 7 A 9 LEU A 191 VAL A 196 1 O ALA A 192 N TYR A 168 SHEET 8 A 9 MSE A 326 VAL A 330 1 O GLY A 327 N ILE A 194 SHEET 9 A 9 ILE A 350 GLU A 355 1 O ALA A 354 N VAL A 328 LINK C ALA A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N ARG A 2 1555 1555 1.33 LINK C PRO A 91 N MSE A 92 1555 1555 1.33 LINK C MSE A 92 N VAL A 93 1555 1555 1.32 LINK C ALA A 153 N MSE A 154 1555 1555 1.33 LINK C MSE A 154 N ALA A 155 1555 1555 1.33 LINK C LEU A 159 N MSE A 160 1555 1555 1.33 LINK C MSE A 160 N ALA A 161 1555 1555 1.33 LINK C PRO A 234 N MSE A 235 1555 1555 1.33 LINK C MSE A 235 N LYS A 236 1555 1555 1.33 LINK C LYS A 236 N MSE A 237 1555 1555 1.33 LINK C MSE A 237 N GLN A 238 1555 1555 1.33 LINK C TYR A 247 N MSE A 248 1555 1555 1.33 LINK C MSE A 248 N LEU A 249 1555 1555 1.33 LINK C GLU A 262 N MSE A 263 1555 1555 1.32 LINK C MSE A 263 N PHE A 264 1555 1555 1.34 LINK C LEU A 282 N MSE A 283 1555 1555 1.33 LINK C MSE A 283 N LEU A 284 1555 1555 1.33 LINK C PRO A 325 N MSE A 326 1555 1555 1.33 LINK C MSE A 326 N GLY A 327 1555 1555 1.33 LINK C ALA A 364 N MSE A 365 1555 1555 1.33 LINK C MSE A 365 N GLU A 366 1555 1555 1.33 CISPEP 1 TRP A 98 PRO A 99 0 -2.23 SITE 1 AC1 6 ASP A 174 ILE A 175 PHE A 178 MSE A 235 SITE 2 AC1 6 HIS A 303 PRO A 311 SITE 1 AC2 6 ALA A 177 PHE A 178 LEU A 198 GLN A 200 SITE 2 AC2 6 FMT A 405 HOH A 667 SITE 1 AC3 2 PRO A 85 ASP A 114 SITE 1 AC4 3 SER A 319 FMT A 405 HOH A 600 SITE 1 AC5 5 GLN A 200 SER A 319 ACT A 402 FMT A 404 SITE 2 AC5 5 FMT A 406 SITE 1 AC6 5 ASN A 202 ARG A 345 ASP A 346 FMT A 405 SITE 2 AC6 5 HOH A 590 SITE 1 AC7 4 ASP A 174 MSE A 235 HIS A 361 HOH A 620 SITE 1 AC8 4 ARG A 60 SER A 214 ASP A 215 HOH A 618 SITE 1 AC9 3 ASP A 276 ALA A 277 FMT A 410 SITE 1 BC1 7 ASP A 276 ALA A 277 GLU A 366 GLU A 367 SITE 2 BC1 7 FMT A 409 HOH A 506 HOH A 572 SITE 1 BC2 3 LYS A 17 TRP A 49 ARG A 50 SITE 1 BC3 2 PRO A 311 THR A 313 CRYST1 76.011 76.011 161.263 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013156 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013156 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006201 0.00000