HEADER HYDROLASE 24-NOV-12 4I35 TITLE THE CRYSTAL STRUCTURE OF SERRALYSIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERRALYSIN; COMPND 3 CHAIN: A SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SERRATIA; SOURCE 3 ORGANISM_TAXID: 613; SOURCE 4 STRAIN: FS14 KEYWDS AMINO ACID SEQUENCE, BINDING SITES, CALCIUM, METALLOENDOPEPTIDASES, KEYWDS 2 PROTEIN STRUCTURE, 1. ZINCIN LIKE 2. SINGLE-STRANDED RIGHT-HANDED KEYWDS 3 BETA-HELIX, HYDROLASE, METAL ION BINDING, EXTRACELLULAR EXPDTA X-RAY DIFFRACTION AUTHOR M.ZOU,T.RAN,D.XU,W.WANG REVDAT 2 20-MAR-24 4I35 1 REMARK LINK REVDAT 1 27-NOV-13 4I35 0 JRNL AUTH W.WANG,D.XU,M.ZOU,T.RAN JRNL TITL THE CRYSTAL STRUCTURE OF SERRALYSIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.78 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 108473 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.149 REMARK 3 R VALUE (WORKING SET) : 0.148 REMARK 3 FREE R VALUE : 0.165 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 5415 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.7905 - 4.6611 0.98 3650 189 0.1592 0.1857 REMARK 3 2 4.6611 - 3.7007 1.00 3547 201 0.1309 0.1361 REMARK 3 3 3.7007 - 3.2332 1.00 3497 181 0.1459 0.1531 REMARK 3 4 3.2332 - 2.9377 1.00 3490 203 0.1576 0.1726 REMARK 3 5 2.9377 - 2.7272 1.00 3529 161 0.1531 0.1398 REMARK 3 6 2.7272 - 2.5665 1.00 3440 195 0.1474 0.1712 REMARK 3 7 2.5665 - 2.4379 1.00 3459 179 0.1459 0.1531 REMARK 3 8 2.4379 - 2.3318 1.00 3438 175 0.1433 0.1971 REMARK 3 9 2.3318 - 2.2421 1.00 3438 181 0.1432 0.1625 REMARK 3 10 2.2421 - 2.1647 1.00 3468 177 0.1396 0.1735 REMARK 3 11 2.1647 - 2.0970 1.00 3423 170 0.1421 0.1429 REMARK 3 12 2.0970 - 2.0371 1.00 3411 200 0.1463 0.1577 REMARK 3 13 2.0371 - 1.9835 1.00 3439 167 0.1421 0.1628 REMARK 3 14 1.9835 - 1.9351 1.00 3405 183 0.1452 0.1644 REMARK 3 15 1.9351 - 1.8911 1.00 3444 180 0.1482 0.1751 REMARK 3 16 1.8911 - 1.8509 1.00 3393 179 0.1446 0.1744 REMARK 3 17 1.8509 - 1.8138 1.00 3457 166 0.1470 0.1738 REMARK 3 18 1.8138 - 1.7796 1.00 3386 186 0.1454 0.1739 REMARK 3 19 1.7796 - 1.7478 1.00 3370 198 0.1466 0.1574 REMARK 3 20 1.7478 - 1.7182 1.00 3438 152 0.1423 0.1501 REMARK 3 21 1.7182 - 1.6905 1.00 3385 169 0.1471 0.1607 REMARK 3 22 1.6905 - 1.6645 1.00 3474 155 0.1485 0.1789 REMARK 3 23 1.6645 - 1.6400 1.00 3398 168 0.1560 0.1800 REMARK 3 24 1.6400 - 1.6169 1.00 3389 191 0.1584 0.2129 REMARK 3 25 1.6169 - 1.5950 1.00 3412 191 0.1622 0.1776 REMARK 3 26 1.5950 - 1.5743 1.00 3361 177 0.1690 0.1980 REMARK 3 27 1.5743 - 1.5546 1.00 3427 175 0.1657 0.1831 REMARK 3 28 1.5546 - 1.5359 1.00 3376 207 0.1736 0.1910 REMARK 3 29 1.5359 - 1.5181 1.00 3367 196 0.1768 0.1830 REMARK 3 30 1.5181 - 1.5010 0.98 3347 163 0.1929 0.2207 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.100 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.030 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.019 3782 REMARK 3 ANGLE : 1.202 5198 REMARK 3 CHIRALITY : 0.076 526 REMARK 3 PLANARITY : 0.006 680 REMARK 3 DIHEDRAL : 13.652 1288 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4I35 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-NOV-12. REMARK 100 THE DEPOSITION ID IS D_1000076244. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9799 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 108473 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.501 REMARK 200 RESOLUTION RANGE LOW (A) : 37.779 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG8000, 0.1M AMMONIUM SULFATE, REMARK 280 0.1M CITRATE, PH 6.3, EVAPORATION, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.17850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.55700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.53750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 75.55700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.17850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 52.53750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 3 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 388 39.66 -154.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 510 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 176 NE2 REMARK 620 2 HIS A 180 NE2 96.8 REMARK 620 3 HIS A 186 NE2 110.6 97.5 REMARK 620 4 TYR A 216 OH 84.2 176.5 85.1 REMARK 620 5 HOH A1024 O 116.8 101.7 125.6 74.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 511 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG A 253 O REMARK 620 2 GLY A 255 O 91.9 REMARK 620 3 THR A 257 OG1 87.6 77.5 REMARK 620 4 ASP A 285 OD1 81.2 153.8 127.0 REMARK 620 5 ASP A 285 OD2 91.3 154.4 77.3 51.6 REMARK 620 6 GLY A 287 O 84.7 80.8 156.7 73.4 124.7 REMARK 620 7 ASP A 290 OD1 170.9 88.1 83.6 102.5 84.8 104.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 512 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 288 O REMARK 620 2 ASP A 290 OD2 85.0 REMARK 620 3 THR A 327 O 168.8 96.4 REMARK 620 4 GLU A 329 OE2 87.6 137.1 83.8 REMARK 620 5 GLU A 329 OE1 83.4 84.5 85.7 52.6 REMARK 620 6 HOH A1051 O 103.5 75.1 87.6 147.3 157.7 REMARK 620 7 HOH A1053 O 86.9 146.3 97.8 74.8 126.8 75.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 513 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 334 O REMARK 620 2 GLY A 336 O 96.7 REMARK 620 3 ASP A 338 OD2 85.7 85.7 REMARK 620 4 GLY A 351 O 86.8 175.2 91.3 REMARK 620 5 ALA A 353 O 81.5 83.0 161.7 100.9 REMARK 620 6 ASP A 356 OD1 170.3 80.9 84.7 95.1 107.4 REMARK 620 7 ASP A 356 OD2 141.8 111.4 120.6 67.0 77.0 46.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 514 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 343 O REMARK 620 2 ALA A 345 O 86.4 REMARK 620 3 ASN A 347 OD1 84.5 82.2 REMARK 620 4 GLY A 360 O 84.7 166.2 86.5 REMARK 620 5 GLY A 362 O 88.9 87.1 167.7 103.2 REMARK 620 6 ASP A 365 OD1 165.3 83.7 83.4 102.9 101.4 REMARK 620 7 ASP A 365 OD2 145.8 122.6 114.7 69.5 76.2 48.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 515 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 352 O REMARK 620 2 GLY A 354 O 105.7 REMARK 620 3 ASP A 356 OD2 79.3 80.2 REMARK 620 4 GLY A 369 O 79.9 171.9 95.4 REMARK 620 5 ALA A 371 O 84.0 78.0 147.7 108.7 REMARK 620 6 ASP A 374 OD1 156.8 84.0 81.7 88.7 119.0 REMARK 620 7 ASP A 374 OD2 139.4 107.6 128.6 69.8 81.0 50.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 517 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 361 O REMARK 620 2 GLY A 363 O 114.0 REMARK 620 3 ASP A 365 OD2 88.9 97.3 REMARK 620 4 ASP A 383 O 91.9 77.5 174.6 REMARK 620 5 ASP A 390 OD1 161.1 84.9 90.0 91.0 REMARK 620 6 HOH A1071 O 72.0 172.3 87.4 97.9 89.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 516 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 370 O REMARK 620 2 GLY A 372 O 115.2 REMARK 620 3 ASP A 374 OD2 84.4 86.9 REMARK 620 4 ASP A 400 OD1 162.3 82.4 99.2 REMARK 620 5 HOH A1076 O 84.7 160.0 94.8 77.8 REMARK 620 6 HOH A1134 O 93.1 95.8 177.0 82.6 83.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEX A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEX A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OCT A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OCT A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 510 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 511 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 512 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 513 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 514 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 515 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 516 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 517 REMARK 999 REMARK 999 SEQUENCE REMARK 999 A SEQUENCE DATABASE REFERENCE FOR THIS PROTEIN DOES NOT CURRENTLY REMARK 999 EXIST. DBREF 4I35 A 3 471 PDB 4I35 4I35 3 471 SEQRES 1 A 469 THR THR GLY TYR ASP ALA VAL ASP ASP LEU LEU HIS TYR SEQRES 2 A 469 HIS GLU ARG GLY ASN GLY ILE GLN ILE ASN GLY LYS ASP SEQRES 3 A 469 SER PHE SER ASN GLU GLN ALA GLY LEU PHE ILE THR ARG SEQRES 4 A 469 GLU ASN GLN THR TRP ASN GLY TYR LYS VAL PHE GLY GLN SEQRES 5 A 469 PRO VAL LYS LEU THR PHE SER PHE PRO ASP TYR LYS PHE SEQRES 6 A 469 SER SER THR ASN VAL ALA GLY ASP THR GLY LEU SER LYS SEQRES 7 A 469 PHE SER ALA GLU GLN GLN GLN GLN ALA LYS LEU SER LEU SEQRES 8 A 469 GLN SER TRP ALA ASP VAL ALA ASN ILE THR PHE THR GLU SEQRES 9 A 469 VAL ALA ALA GLY GLN LYS ALA ASN ILE THR PHE GLY ASN SEQRES 10 A 469 TYR SER GLN ASP ARG PRO GLY HIS TYR ASP TYR GLY THR SEQRES 11 A 469 GLN ALA TYR ALA PHE LEU PRO ASN THR ILE TRP GLN GLY SEQRES 12 A 469 GLN ASP LEU GLY GLY GLN THR TRP TYR ASN VAL ASN GLN SEQRES 13 A 469 SER ASN VAL LYS HIS PRO ALA THR GLU ASP TYR GLY ARG SEQRES 14 A 469 GLN THR PHE THR HIS GLU ILE GLY HIS ALA LEU GLY LEU SEQRES 15 A 469 SER HIS PRO GLY ASP TYR ASN ALA GLY GLU GLY ASN PRO SEQRES 16 A 469 THR TYR ASN ASP VAL THR TYR ALA GLU ASP THR ARG GLN SEQRES 17 A 469 PHE SER LEU MET SER TYR TRP SER GLU THR ASN THR GLY SEQRES 18 A 469 GLY ASP ASN GLY GLY HIS TYR ALA ALA ALA PRO LEU LEU SEQRES 19 A 469 ASP ASP ILE ALA ALA ILE GLN HIS LEU TYR GLY ALA ASN SEQRES 20 A 469 LEU SER THR ARG THR GLY ASP THR VAL TYR GLY PHE ASN SEQRES 21 A 469 SER ASN THR GLY ARG ASP PHE LEU SER THR THR SER ASN SEQRES 22 A 469 SER GLN LYS VAL ILE PHE ALA ALA TRP ASP ALA GLY GLY SEQRES 23 A 469 ASN ASP THR PHE ASP PHE SER GLY TYR THR ALA ASN GLN SEQRES 24 A 469 ARG ILE ASN LEU ASN GLU LYS SER PHE SER ASP VAL GLY SEQRES 25 A 469 GLY LEU LYS GLY ASN VAL SER ILE ALA ALA GLY VAL THR SEQRES 26 A 469 ILE GLU ASN ALA ILE GLY GLY SER GLY ASN ASP VAL ILE SEQRES 27 A 469 VAL GLY ASN ALA ALA ASN ASN VAL LEU LYS GLY GLY ALA SEQRES 28 A 469 GLY ASN ASP VAL LEU PHE GLY GLY GLY GLY ALA ASP GLU SEQRES 29 A 469 LEU TRP GLY GLY ALA GLY LYS ASP ILE PHE VAL PHE SER SEQRES 30 A 469 ALA ALA SER ASP SER ALA PRO GLY ALA SER ASP TRP ILE SEQRES 31 A 469 ARG ASP PHE GLN LYS GLY ILE ASP LYS ILE ASP LEU SER SEQRES 32 A 469 PHE PHE ASN LYS GLU ALA ASN SER SER ASP PHE ILE HIS SEQRES 33 A 469 PHE VAL ASP HIS PHE SER GLY THR ALA GLY GLU ALA LEU SEQRES 34 A 469 LEU SER TYR ASN ALA SER SER ASN VAL THR ASP LEU SER SEQRES 35 A 469 VAL ASN ILE GLY GLY HIS GLN ALA PRO ASP PHE LEU VAL SEQRES 36 A 469 LYS ILE VAL GLY GLN VAL ASP VAL ALA THR ASP PHE ILE SEQRES 37 A 469 VAL HET GOL A 501 6 HET GOL A 502 6 HET GOL A 503 6 HET GOL A 504 6 HET GOL A 505 6 HET HEX A 506 6 HET HEX A 507 6 HET OCT A 508 8 HET OCT A 509 8 HET ZN A 510 1 HET CA A 511 1 HET CA A 512 1 HET CA A 513 1 HET CA A 514 1 HET CA A 515 1 HET CA A 516 1 HET CA A 517 1 HETNAM GOL GLYCEROL HETNAM HEX HEXANE HETNAM OCT N-OCTANE HETNAM ZN ZINC ION HETNAM CA CALCIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL 5(C3 H8 O3) FORMUL 7 HEX 2(C6 H14) FORMUL 9 OCT 2(C8 H18) FORMUL 11 ZN ZN 2+ FORMUL 12 CA 7(CA 2+) FORMUL 19 HOH *576(H2 O) HELIX 1 1 THR A 4 HIS A 14 1 11 HELIX 2 2 SER A 31 THR A 40 1 10 HELIX 3 3 SER A 82 ALA A 100 1 19 HELIX 4 4 GLN A 158 HIS A 163 1 6 HELIX 5 5 GLU A 167 GLY A 183 1 17 HELIX 6 6 TYR A 190 GLU A 194 5 5 HELIX 7 7 THR A 198 VAL A 202 5 5 HELIX 8 8 SER A 218 GLY A 223 5 6 HELIX 9 9 LEU A 235 GLY A 247 1 13 HELIX 10 10 ARG A 267 SER A 271 5 5 HELIX 11 11 ALA A 380 ALA A 385 5 6 HELIX 12 12 LEU A 404 ASN A 412 1 9 SHEET 1 A 2 GLN A 23 ILE A 24 0 SHEET 2 A 2 LYS A 27 ASP A 28 -1 O LYS A 27 N ILE A 24 SHEET 1 B 5 ILE A 102 GLU A 106 0 SHEET 2 B 5 VAL A 56 SER A 61 1 N LEU A 58 O THR A 103 SHEET 3 B 5 ILE A 115 TYR A 120 1 O ILE A 115 N THR A 59 SHEET 4 B 5 GLN A 151 ASN A 155 1 O TYR A 154 N TYR A 120 SHEET 5 B 5 ALA A 134 ALA A 136 -1 N TYR A 135 O TRP A 153 SHEET 1 C 2 GLN A 122 ARG A 124 0 SHEET 2 C 2 HIS A 127 TYR A 128 -1 O HIS A 127 N ARG A 124 SHEET 1 D 2 ILE A 142 TRP A 143 0 SHEET 2 D 2 GLN A 146 ASP A 147 -1 O GLN A 146 N TRP A 143 SHEET 1 E10 VAL A 258 GLY A 260 0 SHEET 2 E10 THR A 291 ASP A 293 1 O THR A 291 N TYR A 259 SHEET 3 E10 ASN A 330 ILE A 332 1 O ILE A 332 N PHE A 292 SHEET 4 E10 VAL A 348 LYS A 350 1 O LYS A 350 N ALA A 331 SHEET 5 E10 GLU A 366 TRP A 368 1 O TRP A 368 N LEU A 349 SHEET 6 E10 TRP A 391 ILE A 392 1 O TRP A 391 N LEU A 367 SHEET 7 E10 PHE A 455 VAL A 460 1 O VAL A 460 N ILE A 392 SHEET 8 E10 VAL A 440 VAL A 445 -1 N THR A 441 O ILE A 459 SHEET 9 E10 GLU A 429 ASN A 435 -1 N SER A 433 O ASP A 442 SHEET 10 E10 HIS A 418 PHE A 419 1 N HIS A 418 O ALA A 430 SHEET 1 F 3 PHE A 281 ALA A 283 0 SHEET 2 F 3 VAL A 320 ILE A 322 1 O SER A 321 N ALA A 283 SHEET 3 F 3 PHE A 310 SER A 311 -1 N SER A 311 O VAL A 320 SHEET 1 G 6 ARG A 302 ASN A 304 0 SHEET 2 G 6 VAL A 339 VAL A 341 1 O VAL A 341 N ILE A 303 SHEET 3 G 6 VAL A 357 PHE A 359 1 O VAL A 357 N ILE A 340 SHEET 4 G 6 ILE A 375 VAL A 377 1 O ILE A 375 N LEU A 358 SHEET 5 G 6 LYS A 401 ASP A 403 1 O ASP A 403 N PHE A 376 SHEET 6 G 6 PHE A 469 ILE A 470 1 O ILE A 470 N ILE A 402 LINK NE2 HIS A 176 ZN ZN A 510 1555 1555 2.03 LINK NE2 HIS A 180 ZN ZN A 510 1555 1555 2.12 LINK NE2 HIS A 186 ZN ZN A 510 1555 1555 1.88 LINK OH TYR A 216 ZN ZN A 510 1555 1555 2.47 LINK O ARG A 253 CA CA A 511 1555 1555 2.28 LINK O GLY A 255 CA CA A 511 1555 1555 2.38 LINK OG1 THR A 257 CA CA A 511 1555 1555 2.45 LINK OD1 ASP A 285 CA CA A 511 1555 1555 2.50 LINK OD2 ASP A 285 CA CA A 511 1555 1555 2.53 LINK O GLY A 287 CA CA A 511 1555 1555 2.27 LINK O GLY A 288 CA CA A 512 1555 1555 2.34 LINK OD1 ASP A 290 CA CA A 511 1555 1555 2.34 LINK OD2 ASP A 290 CA CA A 512 1555 1555 2.38 LINK O THR A 327 CA CA A 512 1555 1555 2.33 LINK OE2 GLU A 329 CA CA A 512 1555 1555 2.46 LINK OE1 GLU A 329 CA CA A 512 1555 1555 2.49 LINK O GLY A 334 CA CA A 513 1555 1555 2.31 LINK O GLY A 336 CA CA A 513 1555 1555 2.35 LINK OD2 ASP A 338 CA CA A 513 1555 1555 2.35 LINK O ASN A 343 CA CA A 514 1555 1555 2.37 LINK O ALA A 345 CA CA A 514 1555 1555 2.38 LINK OD1 ASN A 347 CA CA A 514 1555 1555 2.34 LINK O GLY A 351 CA CA A 513 1555 1555 2.28 LINK O GLY A 352 CA CA A 515 1555 1555 2.36 LINK O ALA A 353 CA CA A 513 1555 1555 2.31 LINK O GLY A 354 CA CA A 515 1555 1555 2.41 LINK OD1 ASP A 356 CA CA A 513 1555 1555 2.35 LINK OD2 ASP A 356 CA CA A 513 1555 1555 2.97 LINK OD2 ASP A 356 CA CA A 515 1555 1555 2.33 LINK O GLY A 360 CA CA A 514 1555 1555 2.31 LINK O GLY A 361 CA CA A 517 1555 1555 2.27 LINK O GLY A 362 CA CA A 514 1555 1555 2.27 LINK O GLY A 363 CA CA A 517 1555 1555 2.50 LINK OD1 ASP A 365 CA CA A 514 1555 1555 2.39 LINK OD2 ASP A 365 CA CA A 514 1555 1555 2.82 LINK OD2 ASP A 365 CA CA A 517 1555 1555 2.26 LINK O GLY A 369 CA CA A 515 1555 1555 2.33 LINK O GLY A 370 CA CA A 516 1555 1555 2.44 LINK O ALA A 371 CA CA A 515 1555 1555 2.29 LINK O GLY A 372 CA CA A 516 1555 1555 2.43 LINK OD1 ASP A 374 CA CA A 515 1555 1555 2.39 LINK OD2 ASP A 374 CA CA A 515 1555 1555 2.67 LINK OD2 ASP A 374 CA CA A 516 1555 1555 2.26 LINK O ASP A 383 CA CA A 517 1555 1555 2.36 LINK OD1 ASP A 390 CA CA A 517 1555 1555 2.36 LINK OD1 ASP A 400 CA CA A 516 1555 1555 2.56 LINK ZN ZN A 510 O HOH A1024 1555 1555 2.06 LINK CA CA A 512 O HOH A1051 1555 1555 2.37 LINK CA CA A 512 O HOH A1053 1555 1555 2.42 LINK CA CA A 516 O HOH A1076 1555 1555 2.75 LINK CA CA A 516 O HOH A1134 1555 1555 2.30 LINK CA CA A 517 O HOH A1071 1555 1555 2.64 SITE 1 AC1 10 ASP A 168 HIS A 229 TYR A 230 ALA A 231 SITE 2 AC1 10 ALA A 232 LYS A 278 ILE A 280 HOH A 913 SITE 3 AC1 10 HOH A 971 HOH A1040 SITE 1 AC2 8 THR A 4 ASP A 7 TYR A 130 ASN A 157 SITE 2 AC2 8 SER A 405 LYS A 409 HOH A 874 HOH A 924 SITE 1 AC3 5 TRP A 46 ASN A 47 VAL A 56 LYS A 57 SITE 2 AC3 5 ASN A 114 SITE 1 AC4 10 HIS A 16 ARG A 18 LYS A 308 SER A 309 SITE 2 AC4 10 HOH A 656 HOH A 947 HOH A 999 HOH A1096 SITE 3 AC4 10 HOH A1097 HOH A1163 SITE 1 AC5 8 ASN A 101 ALA A 248 ASN A 249 LEU A 250 SITE 2 AC5 8 SER A 251 ASN A 275 HOH A 715 HOH A 910 SITE 1 AC6 3 PRO A 197 TYR A 216 TRP A 217 SITE 1 AC7 4 TYR A 135 ALA A 136 PHE A 137 OCT A 508 SITE 1 AC8 3 PHE A 137 TRP A 143 HEX A 507 SITE 1 AC9 3 GLN A 34 LEU A 37 PHE A 38 SITE 1 BC1 5 HIS A 176 HIS A 180 HIS A 186 TYR A 216 SITE 2 BC1 5 HOH A1024 SITE 1 BC2 6 ARG A 253 GLY A 255 THR A 257 ASP A 285 SITE 2 BC2 6 GLY A 287 ASP A 290 SITE 1 BC3 6 GLY A 288 ASP A 290 THR A 327 GLU A 329 SITE 2 BC3 6 HOH A1051 HOH A1053 SITE 1 BC4 6 GLY A 334 GLY A 336 ASP A 338 GLY A 351 SITE 2 BC4 6 ALA A 353 ASP A 356 SITE 1 BC5 6 ASN A 343 ALA A 345 ASN A 347 GLY A 360 SITE 2 BC5 6 GLY A 362 ASP A 365 SITE 1 BC6 6 GLY A 352 GLY A 354 ASP A 356 GLY A 369 SITE 2 BC6 6 ALA A 371 ASP A 374 SITE 1 BC7 6 GLY A 370 GLY A 372 ASP A 374 ASP A 400 SITE 2 BC7 6 HOH A1076 HOH A1134 SITE 1 BC8 7 GLY A 361 GLY A 362 GLY A 363 ASP A 365 SITE 2 BC8 7 ASP A 383 ASP A 390 HOH A1071 CRYST1 42.357 105.075 151.114 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023609 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009517 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006618 0.00000