data_4I6R # _entry.id 4I6R # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4I6R pdb_00004i6r 10.2210/pdb4i6r/pdb RCSB RCSB076374 ? ? WWPDB D_1000076374 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4FN3 'S52A Mutant Free Protein' unspecified PDB 4FBI 'R46A Mutant Free Protein' unspecified PDB 4F8D 'R46A Mutant Free Protein' unspecified PDB 3G5G 'Native Free Protein' unspecified PDB 3FYA 'R35A Mutant Free Protein' unspecified PDB 3CLC 'DNA Bound Tetramer' unspecified PDB 3S8Q 'DNA Bound Dimer (OL)' unspecified PDB 3UFD 'DNA Bound Dimer (OM)' unspecified PDB 4I6T . unspecified PDB 4I6U . unspecified # _pdbx_database_status.entry_id 4I6R _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-11-30 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Martin, R.N.A.' 1 'McGeehan, J.E.' 2 'Kneale, G.G.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Structural and Mutagenic Analysis of the RM Controller Protein C.Esp1396I.' 'Plos One' 9 e98365 e98365 2014 ? US 1932-6203 ? ? 24887147 10.1371/journal.pone.0098365 1 'Structure of the restriction-modification controller protein C.Esp1396I.' 'Acta Crystallogr.,Sect.D' 65 900 905 2009 ABCRE6 DK 0907-4449 0766 ? 19690367 10.1107/S0907444909020514 2 'Recognition of dual symmetry by the controller protein C.Esp1396I based on the structure of the transcriptional activation complex.' 'Nucleic Acids Res.' 40 4158 4167 2012 NARHAD UK 0305-1048 0389 ? 22210861 10.1093/nar/gkr1250 3 'The structural basis of differential DNA sequence recognition by restriction-modification controller proteins.' 'Nucleic Acids Res.' 40 10532 10542 2012 NARHAD UK 0305-1048 0389 ? 22941636 10.1093/nar/gks718 4 'Structure of the restriction-modification controller protein C.Esp1396I.' 'Acta Crystallogr.,Sect.D' 65 900 905 2009 ABCRE6 DK 0907-4449 0766 ? 19690367 10.1107/S0907444909020514 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Martin, R.N.' 1 ? primary 'McGeehan, J.E.' 2 ? primary 'Kneale, G.' 3 ? 1 'Ball, N.' 4 ? 1 'Streeter, S.D.' 5 ? 1 'Kneale, G.G.' 6 ? 1 'McGeehan, J.E.' 7 ? 2 'McGeehan, J.E.' 8 ? 2 'Ball, N.J.' 9 ? 2 'Streeter, S.D.' 10 ? 2 'Thresh, S.J.' 11 ? 2 'Kneale, G.G.' 12 ? 3 'Ball, N.J.' 13 ? 3 'McGeehan, J.E.' 14 ? 3 'Streeter, S.D.' 15 ? 3 'Thresh, S.J.' 16 ? 3 'Kneale, G.G.' 17 ? 4 'Ball, N.' 18 ? 4 'Streeter, S.D.' 19 ? 4 'Kneale, G.G.' 20 ? 4 'McGeehan, J.E.' 21 ? # _cell.length_a 34.760 _cell.length_b 34.780 _cell.length_c 41.860 _cell.angle_alpha 110.470 _cell.angle_beta 105.600 _cell.angle_gamma 96.000 _cell.entry_id 4I6R _cell.pdbx_unique_axis ? _cell.Z_PDB 2 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 1' _symmetry.entry_id 4I6R _symmetry.Int_Tables_number 1 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Regulatory protein' 9521.175 2 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 3 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 5 ? ? ? ? 4 water nat water 18.015 78 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMESFLLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILK HD ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMESFLLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILK HD ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 GLU n 1 6 SER n 1 7 PHE n 1 8 LEU n 1 9 LEU n 1 10 SER n 1 11 LYS n 1 12 VAL n 1 13 SER n 1 14 PHE n 1 15 VAL n 1 16 ILE n 1 17 LYS n 1 18 LYS n 1 19 ILE n 1 20 ARG n 1 21 LEU n 1 22 GLU n 1 23 LYS n 1 24 GLY n 1 25 MET n 1 26 THR n 1 27 GLN n 1 28 GLU n 1 29 ASP n 1 30 LEU n 1 31 ALA n 1 32 TYR n 1 33 LYS n 1 34 SER n 1 35 ASN n 1 36 LEU n 1 37 ASP n 1 38 ARG n 1 39 THR n 1 40 TYR n 1 41 ILE n 1 42 SER n 1 43 GLY n 1 44 ILE n 1 45 GLU n 1 46 ARG n 1 47 ASN n 1 48 SER n 1 49 ARG n 1 50 ASN n 1 51 LEU n 1 52 THR n 1 53 ILE n 1 54 LYS n 1 55 SER n 1 56 LEU n 1 57 GLU n 1 58 LEU n 1 59 ILE n 1 60 MET n 1 61 LYS n 1 62 GLY n 1 63 LEU n 1 64 GLU n 1 65 VAL n 1 66 SER n 1 67 ASP n 1 68 VAL n 1 69 VAL n 1 70 PHE n 1 71 PHE n 1 72 GLU n 1 73 MET n 1 74 LEU n 1 75 ILE n 1 76 LYS n 1 77 GLU n 1 78 ILE n 1 79 LEU n 1 80 LYS n 1 81 HIS n 1 82 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene esp1396IC _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain RFL1396 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Enterobacter sp.' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 211595 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8GGH0_9ENTR _struct_ref.pdbx_db_accession Q8GGH0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MESFLLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILKHD _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4I6R A 4 ? 82 ? Q8GGH0 1 ? 79 ? 1 79 2 1 4I6R B 4 ? 82 ? Q8GGH0 1 ? 79 ? 1 79 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4I6R GLY A 1 ? UNP Q8GGH0 ? ? 'expression tag' -2 1 1 4I6R SER A 2 ? UNP Q8GGH0 ? ? 'expression tag' -1 2 1 4I6R HIS A 3 ? UNP Q8GGH0 ? ? 'expression tag' 0 3 2 4I6R GLY B 1 ? UNP Q8GGH0 ? ? 'expression tag' -2 4 2 4I6R SER B 2 ? UNP Q8GGH0 ? ? 'expression tag' -1 5 2 4I6R HIS B 3 ? UNP Q8GGH0 ? ? 'expression tag' 0 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4I6R _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.34 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 47.42 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.1 M MMT buffer, 100 mM Sodium Sulphate, 25% PEG 1500, pH 7, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 2M' _diffrn_detector.pdbx_collection_date 2012-09-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Si(111) double crystal monochromator' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.92 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I04-1' _diffrn_source.pdbx_wavelength_list 0.92 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I04-1 # _reflns.entry_id 4I6R _reflns.d_resolution_high 1.38 _reflns.d_resolution_low 37.049 _reflns.number_obs 31070 _reflns.pdbx_Rmerge_I_obs 0.049 _reflns.pdbx_netI_over_sigmaI 14.300 _reflns.pdbx_redundancy 3.800 _reflns.percent_possible_obs 83.500 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all 112030 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.380 1.410 ? 5986 ? 0.370 4.000 ? ? 3.800 ? 1570 83.800 1 1 7.310 25.790 ? 909 ? 0.042 34.900 ? ? 3.900 ? 234 96.700 2 1 # _refine.entry_id 4I6R _refine.ls_d_res_high 1.3800 _refine.ls_d_res_low 25.7900 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 83.5300 _refine.ls_number_reflns_obs 29524 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1505 _refine.ls_R_factor_R_work 0.1489 _refine.ls_wR_factor_R_work 0.1558 _refine.ls_R_factor_R_free 0.1815 _refine.ls_wR_factor_R_free 0.1887 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_number_reflns_R_free 1470 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 15.780 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.0200 _refine.aniso_B[2][2] -0.0200 _refine.aniso_B[3][3] 0.0000 _refine.aniso_B[1][2] 0.0400 _refine.aniso_B[1][3] 0.0200 _refine.aniso_B[2][3] -0.0200 _refine.correlation_coeff_Fo_to_Fc 0.9700 _refine.correlation_coeff_Fo_to_Fc_free 0.9610 _refine.overall_SU_R_Cruickshank_DPI 0.0561 _refine.overall_SU_R_free 0.0610 _refine.pdbx_overall_ESU_R 0.0560 _refine.pdbx_overall_ESU_R_Free 0.0610 _refine.overall_SU_ML 0.0330 _refine.overall_SU_B 1.6590 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'pdb entry 3G5G' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8890 _refine.B_iso_max 56.180 _refine.B_iso_min 2.000 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.300 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1258 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 45 _refine_hist.number_atoms_solvent 78 _refine_hist.number_atoms_total 1381 _refine_hist.d_res_high 1.3800 _refine_hist.d_res_low 25.7900 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1359 0.030 0.019 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1400 0.002 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1821 2.696 2.029 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 3250 1.106 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 172 5.032 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 54 20.565 24.444 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 300 13.517 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 8 22.762 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 220 0.177 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1426 0.014 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 274 0.002 0.020 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.3820 _refine_ls_shell.d_res_low 1.4180 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 83.0600 _refine_ls_shell.number_reflns_R_work 2049 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.1790 _refine_ls_shell.R_factor_R_free 0.2030 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 98 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2147 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4I6R _struct.title 'High Resolution Crystal Structure of the Wild-Type Restriction-Modification Controller Protein C.Esp1396I (Triclinic form)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4I6R _struct_keywords.text 'Restriction-modification, helix-turn-helix, transcriptional regulator, DNA, TRANSCRIPTION' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 2 ? H N N 2 ? I N N 3 ? J N N 3 ? K N N 4 ? L N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 6 ? LYS A 23 ? SER A 3 LYS A 20 1 ? 18 HELX_P HELX_P2 2 THR A 26 ? ASN A 35 ? THR A 23 ASN A 32 1 ? 10 HELX_P HELX_P3 3 ASP A 37 ? ASN A 47 ? ASP A 34 ASN A 44 1 ? 11 HELX_P HELX_P4 4 THR A 52 ? GLU A 64 ? THR A 49 GLU A 61 1 ? 13 HELX_P HELX_P5 5 SER A 66 ? ASP A 82 ? SER A 63 ASP A 79 1 ? 17 HELX_P HELX_P6 6 PHE B 7 ? LYS B 23 ? PHE B 4 LYS B 20 1 ? 17 HELX_P HELX_P7 7 THR B 26 ? ASN B 35 ? THR B 23 ASN B 32 1 ? 10 HELX_P HELX_P8 8 ASP B 37 ? ASN B 47 ? ASP B 34 ASN B 44 1 ? 11 HELX_P HELX_P9 9 THR B 52 ? GLU B 64 ? THR B 49 GLU B 61 1 ? 13 HELX_P HELX_P10 10 SER B 66 ? ASP B 82 ? SER B 63 ASP B 79 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 101 ? 9 'BINDING SITE FOR RESIDUE SO4 A 101' AC2 Software A GOL 102 ? 6 'BINDING SITE FOR RESIDUE GOL A 102' AC3 Software A GOL 103 ? 4 'BINDING SITE FOR RESIDUE GOL A 103' AC4 Software A GOL 104 ? 7 'BINDING SITE FOR RESIDUE GOL A 104' AC5 Software B SO4 101 ? 10 'BINDING SITE FOR RESIDUE SO4 B 101' AC6 Software B SO4 102 ? 4 'BINDING SITE FOR RESIDUE SO4 B 102' AC7 Software B GOL 103 ? 6 'BINDING SITE FOR RESIDUE GOL B 103' AC8 Software B GOL 104 ? 5 'BINDING SITE FOR RESIDUE GOL B 104' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 ARG A 38 ? ARG A 35 . ? 1_555 ? 2 AC1 9 THR A 39 ? THR A 36 . ? 1_555 ? 3 AC1 9 SER A 42 ? SER A 39 . ? 1_555 ? 4 AC1 9 ARG A 46 ? ARG A 43 . ? 1_555 ? 5 AC1 9 HOH K . ? HOH A 203 . ? 1_555 ? 6 AC1 9 HOH K . ? HOH A 205 . ? 1_555 ? 7 AC1 9 HIS B 81 ? HIS B 78 . ? 1_566 ? 8 AC1 9 GOL J . ? GOL B 104 . ? 1_566 ? 9 AC1 9 HOH L . ? HOH B 211 . ? 1_566 ? 10 AC2 6 SER A 6 ? SER A 3 . ? 1_555 ? 11 AC2 6 PHE A 7 ? PHE A 4 . ? 1_555 ? 12 AC2 6 LEU A 8 ? LEU A 5 . ? 1_555 ? 13 AC2 6 ASP A 82 ? ASP A 79 . ? 1_555 ? 14 AC2 6 GLU B 57 ? GLU B 54 . ? 1_555 ? 15 AC2 6 HOH L . ? HOH B 208 . ? 1_555 ? 16 AC3 4 LYS A 18 ? LYS A 15 . ? 1_555 ? 17 AC3 4 LEU A 21 ? LEU A 18 . ? 1_555 ? 18 AC3 4 GLU A 22 ? GLU A 19 . ? 1_555 ? 19 AC3 4 LEU B 21 ? LEU B 18 . ? 1_666 ? 20 AC4 7 LYS A 17 ? LYS A 14 . ? 1_555 ? 21 AC4 7 GLN A 27 ? GLN A 24 . ? 1_555 ? 22 AC4 7 SER A 42 ? SER A 39 . ? 1_555 ? 23 AC4 7 GLU A 45 ? GLU A 42 . ? 1_555 ? 24 AC4 7 ARG A 46 ? ARG A 43 . ? 1_555 ? 25 AC4 7 HOH K . ? HOH A 204 . ? 1_555 ? 26 AC4 7 HOH K . ? HOH A 219 . ? 1_555 ? 27 AC5 10 ARG A 20 ? ARG A 17 . ? 1_444 ? 28 AC5 10 THR A 26 ? THR A 23 . ? 1_444 ? 29 AC5 10 GLN A 27 ? GLN A 24 . ? 1_444 ? 30 AC5 10 HOH K . ? HOH A 204 . ? 1_444 ? 31 AC5 10 THR B 26 ? THR B 23 . ? 1_555 ? 32 AC5 10 GLN B 27 ? GLN B 24 . ? 1_555 ? 33 AC5 10 GLU B 28 ? GLU B 25 . ? 1_555 ? 34 AC5 10 ARG B 38 ? ARG B 35 . ? 1_555 ? 35 AC5 10 HOH L . ? HOH B 201 . ? 1_555 ? 36 AC5 10 HOH L . ? HOH B 202 . ? 1_555 ? 37 AC6 4 ARG A 46 ? ARG A 43 . ? 1_444 ? 38 AC6 4 GLU B 28 ? GLU B 25 . ? 1_555 ? 39 AC6 4 LYS B 80 ? LYS B 77 . ? 1_455 ? 40 AC6 4 HIS B 81 ? HIS B 78 . ? 1_455 ? 41 AC7 6 GLU A 57 ? GLU A 54 . ? 1_555 ? 42 AC7 6 HOH K . ? HOH A 209 . ? 1_555 ? 43 AC7 6 SER B 6 ? SER B 3 . ? 1_555 ? 44 AC7 6 PHE B 7 ? PHE B 4 . ? 1_555 ? 45 AC7 6 LEU B 8 ? LEU B 5 . ? 1_555 ? 46 AC7 6 ASP B 82 ? ASP B 79 . ? 1_555 ? 47 AC8 5 ARG A 46 ? ARG A 43 . ? 1_544 ? 48 AC8 5 SO4 C . ? SO4 A 101 . ? 1_544 ? 49 AC8 5 LYS B 11 ? LYS B 8 . ? 1_555 ? 50 AC8 5 GLU B 77 ? GLU B 74 . ? 1_555 ? 51 AC8 5 HIS B 81 ? HIS B 78 . ? 1_555 ? # _atom_sites.entry_id 4I6R _atom_sites.fract_transf_matrix[1][1] 0.028769 _atom_sites.fract_transf_matrix[1][2] 0.003024 _atom_sites.fract_transf_matrix[1][3] 0.010039 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.028911 _atom_sites.fract_transf_matrix[2][3] 0.012410 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.026991 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -2 ? ? ? A . n A 1 2 SER 2 -1 ? ? ? A . n A 1 3 HIS 3 0 ? ? ? A . n A 1 4 MET 4 1 ? ? ? A . n A 1 5 GLU 5 2 ? ? ? A . n A 1 6 SER 6 3 3 SER SER A . n A 1 7 PHE 7 4 4 PHE PHE A . n A 1 8 LEU 8 5 5 LEU LEU A . n A 1 9 LEU 9 6 6 LEU LEU A . n A 1 10 SER 10 7 7 SER SER A . n A 1 11 LYS 11 8 8 LYS LYS A . n A 1 12 VAL 12 9 9 VAL VAL A . n A 1 13 SER 13 10 10 SER SER A . n A 1 14 PHE 14 11 11 PHE PHE A . n A 1 15 VAL 15 12 12 VAL VAL A . n A 1 16 ILE 16 13 13 ILE ILE A . n A 1 17 LYS 17 14 14 LYS LYS A . n A 1 18 LYS 18 15 15 LYS LYS A . n A 1 19 ILE 19 16 16 ILE ILE A . n A 1 20 ARG 20 17 17 ARG ARG A . n A 1 21 LEU 21 18 18 LEU LEU A . n A 1 22 GLU 22 19 19 GLU GLU A . n A 1 23 LYS 23 20 20 LYS LYS A . n A 1 24 GLY 24 21 21 GLY GLY A . n A 1 25 MET 25 22 22 MET MET A . n A 1 26 THR 26 23 23 THR THR A . n A 1 27 GLN 27 24 24 GLN GLN A . n A 1 28 GLU 28 25 25 GLU GLU A . n A 1 29 ASP 29 26 26 ASP ASP A . n A 1 30 LEU 30 27 27 LEU LEU A . n A 1 31 ALA 31 28 28 ALA ALA A . n A 1 32 TYR 32 29 29 TYR TYR A . n A 1 33 LYS 33 30 30 LYS LYS A . n A 1 34 SER 34 31 31 SER SER A . n A 1 35 ASN 35 32 32 ASN ASN A . n A 1 36 LEU 36 33 33 LEU LEU A . n A 1 37 ASP 37 34 34 ASP ASP A . n A 1 38 ARG 38 35 35 ARG ARG A . n A 1 39 THR 39 36 36 THR THR A . n A 1 40 TYR 40 37 37 TYR TYR A . n A 1 41 ILE 41 38 38 ILE ILE A . n A 1 42 SER 42 39 39 SER SER A . n A 1 43 GLY 43 40 40 GLY GLY A . n A 1 44 ILE 44 41 41 ILE ILE A . n A 1 45 GLU 45 42 42 GLU GLU A . n A 1 46 ARG 46 43 43 ARG ARG A . n A 1 47 ASN 47 44 44 ASN ASN A . n A 1 48 SER 48 45 45 SER SER A . n A 1 49 ARG 49 46 46 ARG ARG A . n A 1 50 ASN 50 47 47 ASN ASN A . n A 1 51 LEU 51 48 48 LEU LEU A . n A 1 52 THR 52 49 49 THR THR A . n A 1 53 ILE 53 50 50 ILE ILE A . n A 1 54 LYS 54 51 51 LYS LYS A . n A 1 55 SER 55 52 52 SER SER A . n A 1 56 LEU 56 53 53 LEU LEU A . n A 1 57 GLU 57 54 54 GLU GLU A . n A 1 58 LEU 58 55 55 LEU LEU A . n A 1 59 ILE 59 56 56 ILE ILE A . n A 1 60 MET 60 57 57 MET MET A . n A 1 61 LYS 61 58 58 LYS LYS A . n A 1 62 GLY 62 59 59 GLY GLY A . n A 1 63 LEU 63 60 60 LEU LEU A . n A 1 64 GLU 64 61 61 GLU GLU A . n A 1 65 VAL 65 62 62 VAL VAL A . n A 1 66 SER 66 63 63 SER SER A . n A 1 67 ASP 67 64 64 ASP ASP A . n A 1 68 VAL 68 65 65 VAL VAL A . n A 1 69 VAL 69 66 66 VAL VAL A . n A 1 70 PHE 70 67 67 PHE PHE A . n A 1 71 PHE 71 68 68 PHE PHE A . n A 1 72 GLU 72 69 69 GLU GLU A . n A 1 73 MET 73 70 70 MET MET A . n A 1 74 LEU 74 71 71 LEU LEU A . n A 1 75 ILE 75 72 72 ILE ILE A . n A 1 76 LYS 76 73 73 LYS LYS A . n A 1 77 GLU 77 74 74 GLU GLU A . n A 1 78 ILE 78 75 75 ILE ILE A . n A 1 79 LEU 79 76 76 LEU LEU A . n A 1 80 LYS 80 77 77 LYS LYS A . n A 1 81 HIS 81 78 78 HIS HIS A . n A 1 82 ASP 82 79 79 ASP ASP A . n B 1 1 GLY 1 -2 ? ? ? B . n B 1 2 SER 2 -1 ? ? ? B . n B 1 3 HIS 3 0 ? ? ? B . n B 1 4 MET 4 1 ? ? ? B . n B 1 5 GLU 5 2 ? ? ? B . n B 1 6 SER 6 3 3 SER SER B . n B 1 7 PHE 7 4 4 PHE PHE B . n B 1 8 LEU 8 5 5 LEU LEU B . n B 1 9 LEU 9 6 6 LEU LEU B . n B 1 10 SER 10 7 7 SER SER B . n B 1 11 LYS 11 8 8 LYS LYS B . n B 1 12 VAL 12 9 9 VAL VAL B . n B 1 13 SER 13 10 10 SER SER B . n B 1 14 PHE 14 11 11 PHE PHE B . n B 1 15 VAL 15 12 12 VAL VAL B . n B 1 16 ILE 16 13 13 ILE ILE B . n B 1 17 LYS 17 14 14 LYS LYS B . n B 1 18 LYS 18 15 15 LYS LYS B . n B 1 19 ILE 19 16 16 ILE ILE B . n B 1 20 ARG 20 17 17 ARG ARG B . n B 1 21 LEU 21 18 18 LEU LEU B . n B 1 22 GLU 22 19 19 GLU GLU B . n B 1 23 LYS 23 20 20 LYS LYS B . n B 1 24 GLY 24 21 21 GLY GLY B . n B 1 25 MET 25 22 22 MET MET B . n B 1 26 THR 26 23 23 THR THR B . n B 1 27 GLN 27 24 24 GLN GLN B . n B 1 28 GLU 28 25 25 GLU GLU B . n B 1 29 ASP 29 26 26 ASP ASP B . n B 1 30 LEU 30 27 27 LEU LEU B . n B 1 31 ALA 31 28 28 ALA ALA B . n B 1 32 TYR 32 29 29 TYR TYR B . n B 1 33 LYS 33 30 30 LYS LYS B . n B 1 34 SER 34 31 31 SER SER B . n B 1 35 ASN 35 32 32 ASN ASN B . n B 1 36 LEU 36 33 33 LEU LEU B . n B 1 37 ASP 37 34 34 ASP ASP B . n B 1 38 ARG 38 35 35 ARG ARG B . n B 1 39 THR 39 36 36 THR THR B . n B 1 40 TYR 40 37 37 TYR TYR B . n B 1 41 ILE 41 38 38 ILE ILE B . n B 1 42 SER 42 39 39 SER SER B . n B 1 43 GLY 43 40 40 GLY GLY B . n B 1 44 ILE 44 41 41 ILE ILE B . n B 1 45 GLU 45 42 42 GLU GLU B . n B 1 46 ARG 46 43 43 ARG ARG B . n B 1 47 ASN 47 44 44 ASN ASN B . n B 1 48 SER 48 45 45 SER SER B . n B 1 49 ARG 49 46 46 ARG ARG B . n B 1 50 ASN 50 47 47 ASN ASN B . n B 1 51 LEU 51 48 48 LEU LEU B . n B 1 52 THR 52 49 49 THR THR B . n B 1 53 ILE 53 50 50 ILE ILE B . n B 1 54 LYS 54 51 51 LYS LYS B . n B 1 55 SER 55 52 52 SER SER B . n B 1 56 LEU 56 53 53 LEU LEU B . n B 1 57 GLU 57 54 54 GLU GLU B . n B 1 58 LEU 58 55 55 LEU LEU B . n B 1 59 ILE 59 56 56 ILE ILE B . n B 1 60 MET 60 57 57 MET MET B . n B 1 61 LYS 61 58 58 LYS LYS B . n B 1 62 GLY 62 59 59 GLY GLY B . n B 1 63 LEU 63 60 60 LEU LEU B . n B 1 64 GLU 64 61 61 GLU GLU B . n B 1 65 VAL 65 62 62 VAL VAL B . n B 1 66 SER 66 63 63 SER SER B . n B 1 67 ASP 67 64 64 ASP ASP B . n B 1 68 VAL 68 65 65 VAL VAL B . n B 1 69 VAL 69 66 66 VAL VAL B . n B 1 70 PHE 70 67 67 PHE PHE B . n B 1 71 PHE 71 68 68 PHE PHE B . n B 1 72 GLU 72 69 69 GLU GLU B . n B 1 73 MET 73 70 70 MET MET B . n B 1 74 LEU 74 71 71 LEU LEU B . n B 1 75 ILE 75 72 72 ILE ILE B . n B 1 76 LYS 76 73 73 LYS LYS B . n B 1 77 GLU 77 74 74 GLU GLU B . n B 1 78 ILE 78 75 75 ILE ILE B . n B 1 79 LEU 79 76 76 LEU LEU B . n B 1 80 LYS 80 77 77 LYS LYS B . n B 1 81 HIS 81 78 78 HIS HIS B . n B 1 82 ASP 82 79 79 ASP ASP B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 1 101 2 SO4 SO4 A . D 3 GOL 1 102 1 GOL GOL A . E 3 GOL 1 103 4 GOL GOL A . F 3 GOL 1 104 5 GOL GOL A . G 2 SO4 1 101 1 SO4 SO4 B . H 2 SO4 1 102 3 SO4 SO4 B . I 3 GOL 1 103 2 GOL GOL B . J 3 GOL 1 104 3 GOL GOL B . K 4 HOH 1 201 3 HOH HOH A . K 4 HOH 2 202 5 HOH HOH A . K 4 HOH 3 203 8 HOH HOH A . K 4 HOH 4 204 9 HOH HOH A . K 4 HOH 5 205 10 HOH HOH A . K 4 HOH 6 206 11 HOH HOH A . K 4 HOH 7 207 12 HOH HOH A . K 4 HOH 8 208 13 HOH HOH A . K 4 HOH 9 209 15 HOH HOH A . K 4 HOH 10 210 18 HOH HOH A . K 4 HOH 11 211 22 HOH HOH A . K 4 HOH 12 212 23 HOH HOH A . K 4 HOH 13 213 24 HOH HOH A . K 4 HOH 14 214 25 HOH HOH A . K 4 HOH 15 215 28 HOH HOH A . K 4 HOH 16 216 29 HOH HOH A . K 4 HOH 17 217 30 HOH HOH A . K 4 HOH 18 218 35 HOH HOH A . K 4 HOH 19 219 37 HOH HOH A . K 4 HOH 20 220 40 HOH HOH A . K 4 HOH 21 221 42 HOH HOH A . K 4 HOH 22 222 45 HOH HOH A . K 4 HOH 23 223 46 HOH HOH A . K 4 HOH 24 224 47 HOH HOH A . K 4 HOH 25 225 49 HOH HOH A . K 4 HOH 26 226 51 HOH HOH A . K 4 HOH 27 227 54 HOH HOH A . K 4 HOH 28 228 55 HOH HOH A . K 4 HOH 29 229 57 HOH HOH A . K 4 HOH 30 230 59 HOH HOH A . K 4 HOH 31 231 62 HOH HOH A . K 4 HOH 32 232 65 HOH HOH A . K 4 HOH 33 233 67 HOH HOH A . K 4 HOH 34 234 69 HOH HOH A . K 4 HOH 35 235 70 HOH HOH A . K 4 HOH 36 236 71 HOH HOH A . K 4 HOH 37 237 73 HOH HOH A . K 4 HOH 38 238 74 HOH HOH A . K 4 HOH 39 239 75 HOH HOH A . K 4 HOH 40 240 76 HOH HOH A . L 4 HOH 1 201 1 HOH HOH B . L 4 HOH 2 202 2 HOH HOH B . L 4 HOH 3 203 4 HOH HOH B . L 4 HOH 4 204 6 HOH HOH B . L 4 HOH 5 205 7 HOH HOH B . L 4 HOH 6 206 14 HOH HOH B . L 4 HOH 7 207 16 HOH HOH B . L 4 HOH 8 208 17 HOH HOH B . L 4 HOH 9 209 19 HOH HOH B . L 4 HOH 10 210 20 HOH HOH B . L 4 HOH 11 211 21 HOH HOH B . L 4 HOH 12 212 26 HOH HOH B . L 4 HOH 13 213 27 HOH HOH B . L 4 HOH 14 214 31 HOH HOH B . L 4 HOH 15 215 32 HOH HOH B . L 4 HOH 16 216 33 HOH HOH B . L 4 HOH 17 217 34 HOH HOH B . L 4 HOH 18 218 36 HOH HOH B . L 4 HOH 19 219 39 HOH HOH B . L 4 HOH 20 220 41 HOH HOH B . L 4 HOH 21 221 43 HOH HOH B . L 4 HOH 22 222 44 HOH HOH B . L 4 HOH 23 223 48 HOH HOH B . L 4 HOH 24 224 50 HOH HOH B . L 4 HOH 25 225 52 HOH HOH B . L 4 HOH 26 226 53 HOH HOH B . L 4 HOH 27 227 56 HOH HOH B . L 4 HOH 28 228 58 HOH HOH B . L 4 HOH 29 229 60 HOH HOH B . L 4 HOH 30 230 61 HOH HOH B . L 4 HOH 31 231 63 HOH HOH B . L 4 HOH 32 232 64 HOH HOH B . L 4 HOH 33 233 66 HOH HOH B . L 4 HOH 34 234 68 HOH HOH B . L 4 HOH 35 235 72 HOH HOH B . L 4 HOH 36 236 77 HOH HOH B . L 4 HOH 37 237 78 HOH HOH B . L 4 HOH 38 238 79 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 software_defined_assembly PISA dimeric 2 3 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I,J,K,L 2 1 A,C,D,E,F,K 2 2 B,G,H,I,J,L 3 1 A,C,D,E,F,K 3 3 B,G,H,I,J,L # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3330 ? 1 MORE -53 ? 1 'SSA (A^2)' 8420 ? 2 'ABSA (A^2)' 1830 ? 2 MORE -47 ? 2 'SSA (A^2)' 9920 ? 3 'ABSA (A^2)' 1940 ? 3 MORE -48 ? 3 'SSA (A^2)' 9820 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 1_566 x,y+1,z+1 1.0000000000 0.0000000000 0.0000000000 -14.8924836434 0.0000000000 1.0000000000 0.0000000000 18.6865291973 0.0000000000 0.0000000000 1.0000000000 37.0491071908 3 'crystal symmetry operation' 1_666 x+1,y+1,z+1 1.0000000000 0.0000000000 0.0000000000 19.8675163566 0.0000000000 1.0000000000 0.0000000000 18.6865291973 0.0000000000 0.0000000000 1.0000000000 37.0491071908 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-11-13 2 'Structure model' 1 1 2014-06-18 3 'Structure model' 1 2 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 2.7060 -6.7860 -21.3690 0.1032 0.0485 0.0314 -0.0513 -0.0316 0.0365 0.0837 1.1448 0.8208 -0.2042 -0.0756 0.5702 -0.0252 0.0245 0.0007 -0.0255 -0.0307 0.0389 0.0618 0.0093 0.0378 'X-RAY DIFFRACTION' 2 ? refined -5.1880 -15.6720 -36.8770 0.0989 0.0591 0.0246 -0.0509 -0.0363 0.0376 1.5052 0.1440 0.6833 0.0240 0.6827 0.1986 0.0233 -0.0197 -0.0037 0.0598 0.0419 -0.0136 -0.0242 0.0332 0.0083 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 3 A 79 ? . . . . ? 'X-RAY DIFFRACTION' 2 1 A 101 A 104 ? . . . . ? 'X-RAY DIFFRACTION' 3 1 A 201 A 240 ? . . . . ? 'X-RAY DIFFRACTION' 4 2 B 3 B 79 ? . . . . ? 'X-RAY DIFFRACTION' 5 2 B 101 B 104 ? . . . . ? 'X-RAY DIFFRACTION' 6 2 B 201 B 238 ? . . . . ? # _pdbx_phasing_MR.entry_id 4I6R _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 1.380 _pdbx_phasing_MR.d_res_low_rotation 25.790 _pdbx_phasing_MR.d_res_high_translation 1.380 _pdbx_phasing_MR.d_res_low_translation 25.790 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MOSFLM . ? package 'Andrew G.W. Leslie' andrew@mrc-lmb.cam.ac.uk 'data reduction' http://www.mrc-lmb.cam.ac.uk/harry/mosflm/ ? ? 2 Aimless 0.1.26 03/07/12 program 'Phil Evans' ? 'data scaling' http://www.mrc-lmb.cam.ac.uk/harry/pre/aimless.html ? ? 3 PHASER 2.5.1 'Tue Jul 10 12:42:19 2012 (svn )' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 GDA . ? ? ? ? 'data collection' ? ? ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O2 A GOL 104 ? ? O A HOH 219 ? ? 2.02 2 1 N A SER 3 ? ? O A HOH 236 ? ? 2.03 3 1 CG A MET 57 ? A O A HOH 214 ? ? 2.12 4 1 OE1 A GLU 54 ? ? O1 B GOL 103 ? ? 2.12 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CG A PHE 4 ? ? CD2 A PHE 4 ? ? 1.476 1.383 0.093 0.015 N 2 1 CD A GLU 25 ? ? OE2 A GLU 25 ? ? 1.333 1.252 0.081 0.011 N 3 1 CB A SER 45 ? ? OG A SER 45 ? ? 1.497 1.418 0.079 0.013 N 4 1 CB B SER 7 ? ? OG B SER 7 ? ? 1.327 1.418 -0.091 0.013 N 5 1 CE1 B TYR 29 ? ? CZ B TYR 29 ? ? 1.296 1.381 -0.085 0.013 N 6 1 CD B GLU 69 ? ? OE2 B GLU 69 ? ? 1.319 1.252 0.067 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 17 ? ? CZ A ARG 17 ? ? NH1 A ARG 17 ? ? 123.37 120.30 3.07 0.50 N 2 1 OE1 A GLU 25 ? ? CD A GLU 25 ? ? OE2 A GLU 25 ? ? 131.54 123.30 8.24 1.20 N 3 1 NE A ARG 43 ? ? CZ A ARG 43 ? ? NH2 A ARG 43 ? ? 117.07 120.30 -3.23 0.50 N 4 1 CB A ASP 64 ? ? CG A ASP 64 ? ? OD1 A ASP 64 ? ? 128.22 118.30 9.92 0.90 N 5 1 CB A PHE 67 ? ? CG A PHE 67 ? ? CD2 A PHE 67 ? ? 116.31 120.80 -4.49 0.70 N 6 1 CB B LEU 6 ? ? CG B LEU 6 ? ? CD1 B LEU 6 ? ? 122.02 111.00 11.02 1.70 N 7 1 CB B LEU 6 ? ? CG B LEU 6 ? ? CD2 B LEU 6 ? ? 97.56 111.00 -13.44 1.70 N 8 1 CD B LYS 20 ? ? CE B LYS 20 ? ? NZ B LYS 20 ? ? 97.41 111.70 -14.29 2.30 N 9 1 NE B ARG 46 ? ? CZ B ARG 46 ? ? NH1 B ARG 46 ? ? 124.04 120.30 3.74 0.50 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 44 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -160.09 _pdbx_validate_torsion.psi 118.67 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id ASN _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 44 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.071 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -2 ? A GLY 1 2 1 Y 1 A SER -1 ? A SER 2 3 1 Y 1 A HIS 0 ? A HIS 3 4 1 Y 1 A MET 1 ? A MET 4 5 1 Y 1 A GLU 2 ? A GLU 5 6 1 Y 1 B GLY -2 ? B GLY 1 7 1 Y 1 B SER -1 ? B SER 2 8 1 Y 1 B HIS 0 ? B HIS 3 9 1 Y 1 B MET 1 ? B MET 4 10 1 Y 1 B GLU 2 ? B GLU 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 GOL C1 C N N 123 GOL O1 O N N 124 GOL C2 C N N 125 GOL O2 O N N 126 GOL C3 C N N 127 GOL O3 O N N 128 GOL H11 H N N 129 GOL H12 H N N 130 GOL HO1 H N N 131 GOL H2 H N N 132 GOL HO2 H N N 133 GOL H31 H N N 134 GOL H32 H N N 135 GOL HO3 H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 SER N N N N 273 SER CA C N S 274 SER C C N N 275 SER O O N N 276 SER CB C N N 277 SER OG O N N 278 SER OXT O N N 279 SER H H N N 280 SER H2 H N N 281 SER HA H N N 282 SER HB2 H N N 283 SER HB3 H N N 284 SER HG H N N 285 SER HXT H N N 286 SO4 S S N N 287 SO4 O1 O N N 288 SO4 O2 O N N 289 SO4 O3 O N N 290 SO4 O4 O N N 291 THR N N N N 292 THR CA C N S 293 THR C C N N 294 THR O O N N 295 THR CB C N R 296 THR OG1 O N N 297 THR CG2 C N N 298 THR OXT O N N 299 THR H H N N 300 THR H2 H N N 301 THR HA H N N 302 THR HB H N N 303 THR HG1 H N N 304 THR HG21 H N N 305 THR HG22 H N N 306 THR HG23 H N N 307 THR HXT H N N 308 TYR N N N N 309 TYR CA C N S 310 TYR C C N N 311 TYR O O N N 312 TYR CB C N N 313 TYR CG C Y N 314 TYR CD1 C Y N 315 TYR CD2 C Y N 316 TYR CE1 C Y N 317 TYR CE2 C Y N 318 TYR CZ C Y N 319 TYR OH O N N 320 TYR OXT O N N 321 TYR H H N N 322 TYR H2 H N N 323 TYR HA H N N 324 TYR HB2 H N N 325 TYR HB3 H N N 326 TYR HD1 H N N 327 TYR HD2 H N N 328 TYR HE1 H N N 329 TYR HE2 H N N 330 TYR HH H N N 331 TYR HXT H N N 332 VAL N N N N 333 VAL CA C N S 334 VAL C C N N 335 VAL O O N N 336 VAL CB C N N 337 VAL CG1 C N N 338 VAL CG2 C N N 339 VAL OXT O N N 340 VAL H H N N 341 VAL H2 H N N 342 VAL HA H N N 343 VAL HB H N N 344 VAL HG11 H N N 345 VAL HG12 H N N 346 VAL HG13 H N N 347 VAL HG21 H N N 348 VAL HG22 H N N 349 VAL HG23 H N N 350 VAL HXT H N N 351 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 GOL C1 O1 sing N N 116 GOL C1 C2 sing N N 117 GOL C1 H11 sing N N 118 GOL C1 H12 sing N N 119 GOL O1 HO1 sing N N 120 GOL C2 O2 sing N N 121 GOL C2 C3 sing N N 122 GOL C2 H2 sing N N 123 GOL O2 HO2 sing N N 124 GOL C3 O3 sing N N 125 GOL C3 H31 sing N N 126 GOL C3 H32 sing N N 127 GOL O3 HO3 sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 SER N CA sing N N 260 SER N H sing N N 261 SER N H2 sing N N 262 SER CA C sing N N 263 SER CA CB sing N N 264 SER CA HA sing N N 265 SER C O doub N N 266 SER C OXT sing N N 267 SER CB OG sing N N 268 SER CB HB2 sing N N 269 SER CB HB3 sing N N 270 SER OG HG sing N N 271 SER OXT HXT sing N N 272 SO4 S O1 doub N N 273 SO4 S O2 doub N N 274 SO4 S O3 sing N N 275 SO4 S O4 sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TYR N CA sing N N 293 TYR N H sing N N 294 TYR N H2 sing N N 295 TYR CA C sing N N 296 TYR CA CB sing N N 297 TYR CA HA sing N N 298 TYR C O doub N N 299 TYR C OXT sing N N 300 TYR CB CG sing N N 301 TYR CB HB2 sing N N 302 TYR CB HB3 sing N N 303 TYR CG CD1 doub Y N 304 TYR CG CD2 sing Y N 305 TYR CD1 CE1 sing Y N 306 TYR CD1 HD1 sing N N 307 TYR CD2 CE2 doub Y N 308 TYR CD2 HD2 sing N N 309 TYR CE1 CZ doub Y N 310 TYR CE1 HE1 sing N N 311 TYR CE2 CZ sing Y N 312 TYR CE2 HE2 sing N N 313 TYR CZ OH sing N N 314 TYR OH HH sing N N 315 TYR OXT HXT sing N N 316 VAL N CA sing N N 317 VAL N H sing N N 318 VAL N H2 sing N N 319 VAL CA C sing N N 320 VAL CA CB sing N N 321 VAL CA HA sing N N 322 VAL C O doub N N 323 VAL C OXT sing N N 324 VAL CB CG1 sing N N 325 VAL CB CG2 sing N N 326 VAL CB HB sing N N 327 VAL CG1 HG11 sing N N 328 VAL CG1 HG12 sing N N 329 VAL CG1 HG13 sing N N 330 VAL CG2 HG21 sing N N 331 VAL CG2 HG22 sing N N 332 VAL CG2 HG23 sing N N 333 VAL OXT HXT sing N N 334 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 GLYCEROL GOL 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3G5G _pdbx_initial_refinement_model.details 'pdb entry 3G5G' #