data_4I7Y # _entry.id 4I7Y # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4I7Y pdb_00004i7y 10.2210/pdb4i7y/pdb NDB NA2157 ? ? RCSB RCSB076417 ? ? WWPDB D_1000076417 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-10-16 2 'Structure model' 1 1 2013-12-11 3 'Structure model' 1 2 2014-01-01 4 'Structure model' 1 3 2020-07-29 5 'Structure model' 1 4 2024-10-09 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Structure summary' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp 2 4 'Structure model' entity 3 4 'Structure model' pdbx_chem_comp_identifier 4 4 'Structure model' pdbx_entity_nonpoly 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_site 8 4 'Structure model' struct_site_gen 9 5 'Structure model' chem_comp 10 5 'Structure model' chem_comp_atom 11 5 'Structure model' chem_comp_bond 12 5 'Structure model' database_2 13 5 'Structure model' pdbx_entry_details 14 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_chem_comp.name' 2 4 'Structure model' '_chem_comp.type' 3 4 'Structure model' '_entity.pdbx_description' 4 4 'Structure model' '_pdbx_entity_nonpoly.name' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.value' 14 4 'Structure model' '_struct_conn.conn_type_id' 15 4 'Structure model' '_struct_conn.id' 16 4 'Structure model' '_struct_conn.pdbx_dist_value' 17 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 18 4 'Structure model' '_struct_conn.pdbx_ptnr1_PDB_ins_code' 19 4 'Structure model' '_struct_conn.pdbx_role' 20 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 21 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 26 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 27 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 29 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 30 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 31 5 'Structure model' '_chem_comp.pdbx_synonyms' 32 5 'Structure model' '_database_2.pdbx_DOI' 33 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4I7Y _pdbx_database_status.recvd_initial_deposition_date 2012-12-01 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4DIH . unspecified PDB 4DII . unspecified PDB 3QLP . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pica, A.' 1 'Russo Krauss, I.' 2 'Merlino, A.' 3 'Mazzarella, L.' 4 'Sica, F.' 5 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Duplex-quadruplex motifs in a peculiar structural organization cooperatively contribute to thrombin binding of a DNA aptamer.' 'Acta Crystallogr.,Sect.D' 69 2403 2411 2013 ABCRE6 DK 0907-4449 0766 ? 24311581 10.1107/S0907444913022269 1 'Thrombin-aptamer recognition: a revealed ambiguity.' 'Nucleic Acids Res.' 39 7858 7867 2011 NARHAD UK 0305-1048 0389 ? 21715374 10.1093/nar/gkr522 2 ;High-resolution structures of two complexes between thrombin and thrombin-binding aptamer shed light on the role of cations in the aptamer inhibitory activity. ; 'Nucleic Acids Res.' 40 8119 8128 2012 NARHAD UK 0305-1048 0389 ? 22669903 10.1093/nar/gks512 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Russo Krauss, I.' 1 ? primary 'Pica, A.' 2 ? primary 'Merlino, A.' 3 ? primary 'Mazzarella, L.' 4 ? primary 'Sica, F.' 5 ? 1 'Russo Krauss, I.' 6 ? 1 'Merlino, A.' 7 ? 1 'Giancola, C.' 8 ? 1 'Randazzo, A.' 9 ? 1 'Mazzarella, L.' 10 ? 1 'Sica, F.' 11 ? 2 'Russo Krauss, I.' 12 ? 2 'Merlino, A.' 13 ? 2 'Randazzo, A.' 14 ? 2 'Novellino, E.' 15 ? 2 'Mazzarella, L.' 16 ? 2 'Sica, F.' 17 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat Prothrombin 29780.219 1 3.4.21.5 ? 'HEAVY CHAIN (UNP Residues 364-622)' ? 2 polymer nat Prothrombin 4096.534 1 3.4.21.5 ? 'LIGHT CHAIN (UNP Residues 328-363)' ? 3 polymer syn 'DNA (27-MER)' 8485.429 1 ? ? ? HD22-27mer 4 non-polymer syn 'D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide' 453.986 1 ? ? ? ? 5 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 6 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 7 water nat water 18.015 98 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Coagulation factor II, Activation peptide fragment 1, Activation peptide fragment 2, Thrombin heavy chain' 2 'Coagulation factor II, Activation peptide fragment 1, Activation peptide fragment 2, Thrombin light chain' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; H ? 2 'polypeptide(L)' no no TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR L ? 3 polydeoxyribonucleotide no no ;(DG)(DT)(DC)(DC)(DG)(DT)(DG)(DG)(DT)(DA)(DG)(DG)(DG)(DC)(DA)(DG)(DG)(DT)(DT)(DG) (DG)(DG)(DG)(DT)(DG)(DA)(DC) ; GTCCGTGGTAGGGCAGGTTGGGGTGAC D ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide' 0G6 5 'SODIUM ION' NA 6 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 7 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 VAL n 1 3 GLU n 1 4 GLY n 1 5 SER n 1 6 ASP n 1 7 ALA n 1 8 GLU n 1 9 ILE n 1 10 GLY n 1 11 MET n 1 12 SER n 1 13 PRO n 1 14 TRP n 1 15 GLN n 1 16 VAL n 1 17 MET n 1 18 LEU n 1 19 PHE n 1 20 ARG n 1 21 LYS n 1 22 SER n 1 23 PRO n 1 24 GLN n 1 25 GLU n 1 26 LEU n 1 27 LEU n 1 28 CYS n 1 29 GLY n 1 30 ALA n 1 31 SER n 1 32 LEU n 1 33 ILE n 1 34 SER n 1 35 ASP n 1 36 ARG n 1 37 TRP n 1 38 VAL n 1 39 LEU n 1 40 THR n 1 41 ALA n 1 42 ALA n 1 43 HIS n 1 44 CYS n 1 45 LEU n 1 46 LEU n 1 47 TYR n 1 48 PRO n 1 49 PRO n 1 50 TRP n 1 51 ASP n 1 52 LYS n 1 53 ASN n 1 54 PHE n 1 55 THR n 1 56 GLU n 1 57 ASN n 1 58 ASP n 1 59 LEU n 1 60 LEU n 1 61 VAL n 1 62 ARG n 1 63 ILE n 1 64 GLY n 1 65 LYS n 1 66 HIS n 1 67 SER n 1 68 ARG n 1 69 THR n 1 70 ARG n 1 71 TYR n 1 72 GLU n 1 73 ARG n 1 74 ASN n 1 75 ILE n 1 76 GLU n 1 77 LYS n 1 78 ILE n 1 79 SER n 1 80 MET n 1 81 LEU n 1 82 GLU n 1 83 LYS n 1 84 ILE n 1 85 TYR n 1 86 ILE n 1 87 HIS n 1 88 PRO n 1 89 ARG n 1 90 TYR n 1 91 ASN n 1 92 TRP n 1 93 ARG n 1 94 GLU n 1 95 ASN n 1 96 LEU n 1 97 ASP n 1 98 ARG n 1 99 ASP n 1 100 ILE n 1 101 ALA n 1 102 LEU n 1 103 MET n 1 104 LYS n 1 105 LEU n 1 106 LYS n 1 107 LYS n 1 108 PRO n 1 109 VAL n 1 110 ALA n 1 111 PHE n 1 112 SER n 1 113 ASP n 1 114 TYR n 1 115 ILE n 1 116 HIS n 1 117 PRO n 1 118 VAL n 1 119 CYS n 1 120 LEU n 1 121 PRO n 1 122 ASP n 1 123 ARG n 1 124 GLU n 1 125 THR n 1 126 ALA n 1 127 ALA n 1 128 SER n 1 129 LEU n 1 130 LEU n 1 131 GLN n 1 132 ALA n 1 133 GLY n 1 134 TYR n 1 135 LYS n 1 136 GLY n 1 137 ARG n 1 138 VAL n 1 139 THR n 1 140 GLY n 1 141 TRP n 1 142 GLY n 1 143 ASN n 1 144 LEU n 1 145 LYS n 1 146 GLU n 1 147 THR n 1 148 TRP n 1 149 THR n 1 150 ALA n 1 151 ASN n 1 152 VAL n 1 153 GLY n 1 154 LYS n 1 155 GLY n 1 156 GLN n 1 157 PRO n 1 158 SER n 1 159 VAL n 1 160 LEU n 1 161 GLN n 1 162 VAL n 1 163 VAL n 1 164 ASN n 1 165 LEU n 1 166 PRO n 1 167 ILE n 1 168 VAL n 1 169 GLU n 1 170 ARG n 1 171 PRO n 1 172 VAL n 1 173 CYS n 1 174 LYS n 1 175 ASP n 1 176 SER n 1 177 THR n 1 178 ARG n 1 179 ILE n 1 180 ARG n 1 181 ILE n 1 182 THR n 1 183 ASP n 1 184 ASN n 1 185 MET n 1 186 PHE n 1 187 CYS n 1 188 ALA n 1 189 GLY n 1 190 TYR n 1 191 LYS n 1 192 PRO n 1 193 ASP n 1 194 GLU n 1 195 GLY n 1 196 LYS n 1 197 ARG n 1 198 GLY n 1 199 ASP n 1 200 ALA n 1 201 CYS n 1 202 GLU n 1 203 GLY n 1 204 ASP n 1 205 SER n 1 206 GLY n 1 207 GLY n 1 208 PRO n 1 209 PHE n 1 210 VAL n 1 211 MET n 1 212 LYS n 1 213 SER n 1 214 PRO n 1 215 PHE n 1 216 ASN n 1 217 ASN n 1 218 ARG n 1 219 TRP n 1 220 TYR n 1 221 GLN n 1 222 MET n 1 223 GLY n 1 224 ILE n 1 225 VAL n 1 226 SER n 1 227 TRP n 1 228 GLY n 1 229 GLU n 1 230 GLY n 1 231 CYS n 1 232 ASP n 1 233 ARG n 1 234 ASP n 1 235 GLY n 1 236 LYS n 1 237 TYR n 1 238 GLY n 1 239 PHE n 1 240 TYR n 1 241 THR n 1 242 HIS n 1 243 VAL n 1 244 PHE n 1 245 ARG n 1 246 LEU n 1 247 LYS n 1 248 LYS n 1 249 TRP n 1 250 ILE n 1 251 GLN n 1 252 LYS n 1 253 VAL n 1 254 ILE n 1 255 ASP n 1 256 GLN n 1 257 PHE n 1 258 GLY n 1 259 GLU n 2 1 THR n 2 2 PHE n 2 3 GLY n 2 4 SER n 2 5 GLY n 2 6 GLU n 2 7 ALA n 2 8 ASP n 2 9 CYS n 2 10 GLY n 2 11 LEU n 2 12 ARG n 2 13 PRO n 2 14 LEU n 2 15 PHE n 2 16 GLU n 2 17 LYS n 2 18 LYS n 2 19 SER n 2 20 LEU n 2 21 GLU n 2 22 ASP n 2 23 LYS n 2 24 THR n 2 25 GLU n 2 26 ARG n 2 27 GLU n 2 28 LEU n 2 29 LEU n 2 30 GLU n 2 31 SER n 2 32 TYR n 2 33 ILE n 2 34 ASP n 2 35 GLY n 2 36 ARG n 3 1 DG n 3 2 DT n 3 3 DC n 3 4 DC n 3 5 DG n 3 6 DT n 3 7 DG n 3 8 DG n 3 9 DT n 3 10 DA n 3 11 DG n 3 12 DG n 3 13 DG n 3 14 DC n 3 15 DA n 3 16 DG n 3 17 DG n 3 18 DT n 3 19 DT n 3 20 DG n 3 21 DG n 3 22 DG n 3 23 DG n 3 24 DT n 3 25 DG n 3 26 DA n 3 27 DC n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _pdbx_entity_src_syn.entity_id 3 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'SYNTHETIC DNA' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0G6 peptide-like . 'D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide' PPACK 'C21 H34 Cl N6 O3 1' 453.986 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 16 16 ILE ILE H . n A 1 2 VAL 2 17 17 VAL VAL H . n A 1 3 GLU 3 18 18 GLU GLU H . n A 1 4 GLY 4 19 19 GLY GLY H . n A 1 5 SER 5 20 20 SER SER H . n A 1 6 ASP 6 21 21 ASP ASP H . n A 1 7 ALA 7 22 22 ALA ALA H . n A 1 8 GLU 8 23 23 GLU GLU H . n A 1 9 ILE 9 24 24 ILE ILE H . n A 1 10 GLY 10 25 25 GLY GLY H . n A 1 11 MET 11 26 26 MET MET H . n A 1 12 SER 12 27 27 SER SER H . n A 1 13 PRO 13 28 28 PRO PRO H . n A 1 14 TRP 14 29 29 TRP TRP H . n A 1 15 GLN 15 30 30 GLN GLN H . n A 1 16 VAL 16 31 31 VAL VAL H . n A 1 17 MET 17 32 32 MET MET H . n A 1 18 LEU 18 33 33 LEU LEU H . n A 1 19 PHE 19 34 34 PHE PHE H . n A 1 20 ARG 20 35 35 ARG ARG H . n A 1 21 LYS 21 36 36 LYS LYS H . n A 1 22 SER 22 36 36 SER SER H A n A 1 23 PRO 23 37 37 PRO PRO H . n A 1 24 GLN 24 38 38 GLN GLN H . n A 1 25 GLU 25 39 39 GLU GLU H . n A 1 26 LEU 26 40 40 LEU LEU H . n A 1 27 LEU 27 41 41 LEU LEU H . n A 1 28 CYS 28 42 42 CYS CYS H . n A 1 29 GLY 29 43 43 GLY GLY H . n A 1 30 ALA 30 44 44 ALA ALA H . n A 1 31 SER 31 45 45 SER SER H . n A 1 32 LEU 32 46 46 LEU LEU H . n A 1 33 ILE 33 47 47 ILE ILE H . n A 1 34 SER 34 48 48 SER SER H . n A 1 35 ASP 35 49 49 ASP ASP H . n A 1 36 ARG 36 50 50 ARG ARG H . n A 1 37 TRP 37 51 51 TRP TRP H . n A 1 38 VAL 38 52 52 VAL VAL H . n A 1 39 LEU 39 53 53 LEU LEU H . n A 1 40 THR 40 54 54 THR THR H . n A 1 41 ALA 41 55 55 ALA ALA H . n A 1 42 ALA 42 56 56 ALA ALA H . n A 1 43 HIS 43 57 57 HIS HIS H . n A 1 44 CYS 44 58 58 CYS CYS H . n A 1 45 LEU 45 59 59 LEU LEU H . n A 1 46 LEU 46 60 60 LEU LEU H . n A 1 47 TYR 47 60 60 TYR TYR H A n A 1 48 PRO 48 60 60 PRO PRO H B n A 1 49 PRO 49 60 60 PRO PRO H C n A 1 50 TRP 50 60 60 TRP TRP H D n A 1 51 ASP 51 60 60 ASP ASP H E n A 1 52 LYS 52 60 60 LYS LYS H F n A 1 53 ASN 53 60 60 ASN ASN H G n A 1 54 PHE 54 60 60 PHE PHE H H n A 1 55 THR 55 60 60 THR THR H I n A 1 56 GLU 56 61 61 GLU GLU H . n A 1 57 ASN 57 62 62 ASN ASN H . n A 1 58 ASP 58 63 63 ASP ASP H . n A 1 59 LEU 59 64 64 LEU LEU H . n A 1 60 LEU 60 65 65 LEU LEU H . n A 1 61 VAL 61 66 66 VAL VAL H . n A 1 62 ARG 62 67 67 ARG ARG H . n A 1 63 ILE 63 68 68 ILE ILE H . n A 1 64 GLY 64 69 69 GLY GLY H . n A 1 65 LYS 65 70 70 LYS LYS H . n A 1 66 HIS 66 71 71 HIS HIS H . n A 1 67 SER 67 72 72 SER SER H . n A 1 68 ARG 68 73 73 ARG ARG H . n A 1 69 THR 69 74 74 THR THR H . n A 1 70 ARG 70 75 75 ARG ARG H . n A 1 71 TYR 71 76 76 TYR TYR H . n A 1 72 GLU 72 77 77 GLU GLU H . n A 1 73 ARG 73 77 77 ARG ARG H A n A 1 74 ASN 74 78 78 ASN ASN H . n A 1 75 ILE 75 79 79 ILE ILE H . n A 1 76 GLU 76 80 80 GLU GLU H . n A 1 77 LYS 77 81 81 LYS LYS H . n A 1 78 ILE 78 82 82 ILE ILE H . n A 1 79 SER 79 83 83 SER SER H . n A 1 80 MET 80 84 84 MET MET H . n A 1 81 LEU 81 85 85 LEU LEU H . n A 1 82 GLU 82 86 86 GLU GLU H . n A 1 83 LYS 83 87 87 LYS LYS H . n A 1 84 ILE 84 88 88 ILE ILE H . n A 1 85 TYR 85 89 89 TYR TYR H . n A 1 86 ILE 86 90 90 ILE ILE H . n A 1 87 HIS 87 91 91 HIS HIS H . n A 1 88 PRO 88 92 92 PRO PRO H . n A 1 89 ARG 89 93 93 ARG ARG H . n A 1 90 TYR 90 94 94 TYR TYR H . n A 1 91 ASN 91 95 95 ASN ASN H . n A 1 92 TRP 92 96 96 TRP TRP H . n A 1 93 ARG 93 97 97 ARG ARG H . n A 1 94 GLU 94 97 97 GLU GLU H A n A 1 95 ASN 95 98 98 ASN ASN H . n A 1 96 LEU 96 99 99 LEU LEU H . n A 1 97 ASP 97 100 100 ASP ASP H . n A 1 98 ARG 98 101 101 ARG ARG H . n A 1 99 ASP 99 102 102 ASP ASP H . n A 1 100 ILE 100 103 103 ILE ILE H . n A 1 101 ALA 101 104 104 ALA ALA H . n A 1 102 LEU 102 105 105 LEU LEU H . n A 1 103 MET 103 106 106 MET MET H . n A 1 104 LYS 104 107 107 LYS LYS H . n A 1 105 LEU 105 108 108 LEU LEU H . n A 1 106 LYS 106 109 109 LYS LYS H . n A 1 107 LYS 107 110 110 LYS LYS H . n A 1 108 PRO 108 111 111 PRO PRO H . n A 1 109 VAL 109 112 112 VAL VAL H . n A 1 110 ALA 110 113 113 ALA ALA H . n A 1 111 PHE 111 114 114 PHE PHE H . n A 1 112 SER 112 115 115 SER SER H . n A 1 113 ASP 113 116 116 ASP ASP H . n A 1 114 TYR 114 117 117 TYR TYR H . n A 1 115 ILE 115 118 118 ILE ILE H . n A 1 116 HIS 116 119 119 HIS HIS H . n A 1 117 PRO 117 120 120 PRO PRO H . n A 1 118 VAL 118 121 121 VAL VAL H . n A 1 119 CYS 119 122 122 CYS CYS H . n A 1 120 LEU 120 123 123 LEU LEU H . n A 1 121 PRO 121 124 124 PRO PRO H . n A 1 122 ASP 122 125 125 ASP ASP H . n A 1 123 ARG 123 126 126 ARG ARG H . n A 1 124 GLU 124 127 127 GLU GLU H . n A 1 125 THR 125 128 128 THR THR H . n A 1 126 ALA 126 129 129 ALA ALA H . n A 1 127 ALA 127 129 129 ALA ALA H A n A 1 128 SER 128 129 129 SER SER H B n A 1 129 LEU 129 129 129 LEU LEU H C n A 1 130 LEU 130 130 130 LEU LEU H . n A 1 131 GLN 131 131 131 GLN GLN H . n A 1 132 ALA 132 132 132 ALA ALA H . n A 1 133 GLY 133 133 133 GLY GLY H . n A 1 134 TYR 134 134 134 TYR TYR H . n A 1 135 LYS 135 135 135 LYS LYS H . n A 1 136 GLY 136 136 136 GLY GLY H . n A 1 137 ARG 137 137 137 ARG ARG H . n A 1 138 VAL 138 138 138 VAL VAL H . n A 1 139 THR 139 139 139 THR THR H . n A 1 140 GLY 140 140 140 GLY GLY H . n A 1 141 TRP 141 141 141 TRP TRP H . n A 1 142 GLY 142 142 142 GLY GLY H . n A 1 143 ASN 143 143 143 ASN ASN H . n A 1 144 LEU 144 144 144 LEU LEU H . n A 1 145 LYS 145 145 145 LYS LYS H . n A 1 146 GLU 146 146 146 GLU GLU H . n A 1 147 THR 147 146 ? ? ? H A n A 1 148 TRP 148 146 ? ? ? H B n A 1 149 THR 149 146 ? ? ? H C n A 1 150 ALA 150 146 ? ? ? H D n A 1 151 ASN 151 146 ? ? ? H E n A 1 152 VAL 152 146 ? ? ? H F n A 1 153 GLY 153 146 ? ? ? H G n A 1 154 LYS 154 146 ? ? ? H H n A 1 155 GLY 155 150 150 GLY GLY H . n A 1 156 GLN 156 151 151 GLN GLN H . n A 1 157 PRO 157 152 152 PRO PRO H . n A 1 158 SER 158 153 153 SER SER H . n A 1 159 VAL 159 154 154 VAL VAL H . n A 1 160 LEU 160 155 155 LEU LEU H . n A 1 161 GLN 161 156 156 GLN GLN H . n A 1 162 VAL 162 157 157 VAL VAL H . n A 1 163 VAL 163 158 158 VAL VAL H . n A 1 164 ASN 164 159 159 ASN ASN H . n A 1 165 LEU 165 160 160 LEU LEU H . n A 1 166 PRO 166 161 161 PRO PRO H . n A 1 167 ILE 167 162 162 ILE ILE H . n A 1 168 VAL 168 163 163 VAL VAL H . n A 1 169 GLU 169 164 164 GLU GLU H . n A 1 170 ARG 170 165 165 ARG ARG H . n A 1 171 PRO 171 166 166 PRO PRO H . n A 1 172 VAL 172 167 167 VAL VAL H . n A 1 173 CYS 173 168 168 CYS CYS H . n A 1 174 LYS 174 169 169 LYS LYS H . n A 1 175 ASP 175 170 170 ASP ASP H . n A 1 176 SER 176 171 171 SER SER H . n A 1 177 THR 177 172 172 THR THR H . n A 1 178 ARG 178 173 173 ARG ARG H . n A 1 179 ILE 179 174 174 ILE ILE H . n A 1 180 ARG 180 175 175 ARG ARG H . n A 1 181 ILE 181 176 176 ILE ILE H . n A 1 182 THR 182 177 177 THR THR H . n A 1 183 ASP 183 178 178 ASP ASP H . n A 1 184 ASN 184 179 179 ASN ASN H . n A 1 185 MET 185 180 180 MET MET H . n A 1 186 PHE 186 181 181 PHE PHE H . n A 1 187 CYS 187 182 182 CYS CYS H . n A 1 188 ALA 188 183 183 ALA ALA H . n A 1 189 GLY 189 184 184 GLY GLY H . n A 1 190 TYR 190 184 184 TYR TYR H A n A 1 191 LYS 191 185 185 LYS LYS H . n A 1 192 PRO 192 186 186 PRO PRO H . n A 1 193 ASP 193 186 186 ASP ASP H A n A 1 194 GLU 194 186 186 GLU GLU H B n A 1 195 GLY 195 186 186 GLY GLY H C n A 1 196 LYS 196 186 186 LYS LYS H D n A 1 197 ARG 197 187 187 ARG ARG H . n A 1 198 GLY 198 188 188 GLY GLY H . n A 1 199 ASP 199 189 189 ASP ASP H . n A 1 200 ALA 200 190 190 ALA ALA H . n A 1 201 CYS 201 191 191 CYS CYS H . n A 1 202 GLU 202 192 192 GLU GLU H . n A 1 203 GLY 203 193 193 GLY GLY H . n A 1 204 ASP 204 194 194 ASP ASP H . n A 1 205 SER 205 195 195 SER SER H . n A 1 206 GLY 206 196 196 GLY GLY H . n A 1 207 GLY 207 197 197 GLY GLY H . n A 1 208 PRO 208 198 198 PRO PRO H . n A 1 209 PHE 209 199 199 PHE PHE H . n A 1 210 VAL 210 200 200 VAL VAL H . n A 1 211 MET 211 201 201 MET MET H . n A 1 212 LYS 212 202 202 LYS LYS H . n A 1 213 SER 213 203 203 SER SER H . n A 1 214 PRO 214 204 204 PRO PRO H . n A 1 215 PHE 215 204 204 PHE PHE H A n A 1 216 ASN 216 204 204 ASN ASN H B n A 1 217 ASN 217 205 205 ASN ASN H . n A 1 218 ARG 218 206 206 ARG ARG H . n A 1 219 TRP 219 207 207 TRP TRP H . n A 1 220 TYR 220 208 208 TYR TYR H . n A 1 221 GLN 221 209 209 GLN GLN H . n A 1 222 MET 222 210 210 MET MET H . n A 1 223 GLY 223 211 211 GLY GLY H . n A 1 224 ILE 224 212 212 ILE ILE H . n A 1 225 VAL 225 213 213 VAL VAL H . n A 1 226 SER 226 214 214 SER SER H . n A 1 227 TRP 227 215 215 TRP TRP H . n A 1 228 GLY 228 216 216 GLY GLY H . n A 1 229 GLU 229 217 217 GLU GLU H . n A 1 230 GLY 230 219 219 GLY GLY H . n A 1 231 CYS 231 220 220 CYS CYS H . n A 1 232 ASP 232 221 221 ASP ASP H A n A 1 233 ARG 233 221 221 ARG ARG H . n A 1 234 ASP 234 222 222 ASP ASP H . n A 1 235 GLY 235 223 223 GLY GLY H . n A 1 236 LYS 236 224 224 LYS LYS H . n A 1 237 TYR 237 225 225 TYR TYR H . n A 1 238 GLY 238 226 226 GLY GLY H . n A 1 239 PHE 239 227 227 PHE PHE H . n A 1 240 TYR 240 228 228 TYR TYR H . n A 1 241 THR 241 229 229 THR THR H . n A 1 242 HIS 242 230 230 HIS HIS H . n A 1 243 VAL 243 231 231 VAL VAL H . n A 1 244 PHE 244 232 232 PHE PHE H . n A 1 245 ARG 245 233 233 ARG ARG H . n A 1 246 LEU 246 234 234 LEU LEU H . n A 1 247 LYS 247 235 235 LYS LYS H . n A 1 248 LYS 248 236 236 LYS LYS H . n A 1 249 TRP 249 237 237 TRP TRP H . n A 1 250 ILE 250 238 238 ILE ILE H . n A 1 251 GLN 251 239 239 GLN GLN H . n A 1 252 LYS 252 240 240 LYS LYS H . n A 1 253 VAL 253 241 241 VAL VAL H . n A 1 254 ILE 254 242 242 ILE ILE H . n A 1 255 ASP 255 243 243 ASP ASP H . n A 1 256 GLN 256 244 244 GLN GLN H . n A 1 257 PHE 257 245 245 PHE PHE H . n A 1 258 GLY 258 246 246 GLY GLY H . n A 1 259 GLU 259 247 ? ? ? H . n B 2 1 THR 1 -5 ? ? ? L . n B 2 2 PHE 2 -4 ? ? ? L . n B 2 3 GLY 3 -3 ? ? ? L . n B 2 4 SER 4 -2 ? ? ? L . n B 2 5 GLY 5 -1 ? ? ? L . n B 2 6 GLU 6 0 ? ? ? L . n B 2 7 ALA 7 1 1 ALA ALA L B n B 2 8 ASP 8 1 1 ASP ASP L A n B 2 9 CYS 9 1 1 CYS CYS L . n B 2 10 GLY 10 2 2 GLY GLY L . n B 2 11 LEU 11 3 3 LEU LEU L . n B 2 12 ARG 12 4 4 ARG ARG L . n B 2 13 PRO 13 5 5 PRO PRO L . n B 2 14 LEU 14 6 6 LEU LEU L . n B 2 15 PHE 15 7 7 PHE PHE L . n B 2 16 GLU 16 8 8 GLU GLU L . n B 2 17 LYS 17 9 9 LYS LYS L . n B 2 18 LYS 18 10 10 LYS LYS L . n B 2 19 SER 19 11 11 SER SER L . n B 2 20 LEU 20 12 12 LEU LEU L . n B 2 21 GLU 21 13 13 GLU GLU L . n B 2 22 ASP 22 14 14 ASP ASP L . n B 2 23 LYS 23 14 14 LYS LYS L A n B 2 24 THR 24 14 14 THR THR L B n B 2 25 GLU 25 14 14 GLU GLU L C n B 2 26 ARG 26 14 14 ARG ARG L D n B 2 27 GLU 27 14 14 GLU GLU L E n B 2 28 LEU 28 14 14 LEU LEU L F n B 2 29 LEU 29 14 14 LEU LEU L G n B 2 30 GLU 30 14 14 GLU GLU L H n B 2 31 SER 31 14 14 SER SER L I n B 2 32 TYR 32 14 14 TYR TYR L J n B 2 33 ILE 33 14 14 ILE ILE L K n B 2 34 ASP 34 15 ? ? ? L . n B 2 35 GLY 35 16 ? ? ? L . n B 2 36 ARG 36 17 ? ? ? L . n C 3 1 DG 1 1 1 DG DG D . n C 3 2 DT 2 2 2 DT DT D . n C 3 3 DC 3 3 3 DC DC D . n C 3 4 DC 4 4 4 DC DC D . n C 3 5 DG 5 5 5 DG DG D . n C 3 6 DT 6 6 6 DT DT D . n C 3 7 DG 7 7 7 DG DG D . n C 3 8 DG 8 8 8 DG DG D . n C 3 9 DT 9 9 9 DT DT D . n C 3 10 DA 10 10 10 DA DA D . n C 3 11 DG 11 11 11 DG DG D . n C 3 12 DG 12 12 12 DG DG D . n C 3 13 DG 13 13 13 DG DG D . n C 3 14 DC 14 14 14 DC DC D . n C 3 15 DA 15 15 15 DA DA D . n C 3 16 DG 16 16 16 DG DG D . n C 3 17 DG 17 17 17 DG DG D . n C 3 18 DT 18 18 18 DT DT D . n C 3 19 DT 19 19 19 DT DT D . n C 3 20 DG 20 20 20 DG DG D . n C 3 21 DG 21 21 21 DG DG D . n C 3 22 DG 22 22 22 DG DG D . n C 3 23 DG 23 23 23 DG DG D . n C 3 24 DT 24 24 24 DT DT D . n C 3 25 DG 25 25 25 DG DG D . n C 3 26 DA 26 26 26 DA DA D . n C 3 27 DC 27 27 27 DC DC D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 0G6 1 302 301 0G6 0G6 H . E 5 NA 1 303 303 NA NA H . F 6 NAG 1 301 302 NAG NAG L . G 7 HOH 1 401 1 HOH HOH H . G 7 HOH 2 402 2 HOH HOH H . G 7 HOH 3 403 3 HOH HOH H . G 7 HOH 4 404 4 HOH HOH H . G 7 HOH 5 405 5 HOH HOH H . G 7 HOH 6 406 6 HOH HOH H . G 7 HOH 7 407 7 HOH HOH H . G 7 HOH 8 408 8 HOH HOH H . G 7 HOH 9 409 9 HOH HOH H . G 7 HOH 10 410 10 HOH HOH H . G 7 HOH 11 411 11 HOH HOH H . G 7 HOH 12 412 13 HOH HOH H . G 7 HOH 13 413 14 HOH HOH H . G 7 HOH 14 414 15 HOH HOH H . G 7 HOH 15 415 16 HOH HOH H . G 7 HOH 16 416 17 HOH HOH H . G 7 HOH 17 417 18 HOH HOH H . G 7 HOH 18 418 19 HOH HOH H . G 7 HOH 19 419 20 HOH HOH H . G 7 HOH 20 420 23 HOH HOH H . G 7 HOH 21 421 24 HOH HOH H . G 7 HOH 22 422 25 HOH HOH H . G 7 HOH 23 423 26 HOH HOH H . G 7 HOH 24 424 28 HOH HOH H . G 7 HOH 25 425 29 HOH HOH H . G 7 HOH 26 426 30 HOH HOH H . G 7 HOH 27 427 31 HOH HOH H . G 7 HOH 28 428 32 HOH HOH H . G 7 HOH 29 429 33 HOH HOH H . G 7 HOH 30 430 34 HOH HOH H . G 7 HOH 31 431 35 HOH HOH H . G 7 HOH 32 432 36 HOH HOH H . G 7 HOH 33 433 37 HOH HOH H . G 7 HOH 34 434 38 HOH HOH H . G 7 HOH 35 435 40 HOH HOH H . G 7 HOH 36 436 41 HOH HOH H . G 7 HOH 37 437 42 HOH HOH H . G 7 HOH 38 438 43 HOH HOH H . G 7 HOH 39 439 44 HOH HOH H . G 7 HOH 40 440 47 HOH HOH H . G 7 HOH 41 441 50 HOH HOH H . G 7 HOH 42 442 51 HOH HOH H . G 7 HOH 43 443 52 HOH HOH H . G 7 HOH 44 444 53 HOH HOH H . G 7 HOH 45 445 54 HOH HOH H . G 7 HOH 46 446 55 HOH HOH H . G 7 HOH 47 447 56 HOH HOH H . G 7 HOH 48 448 57 HOH HOH H . G 7 HOH 49 449 58 HOH HOH H . G 7 HOH 50 450 59 HOH HOH H . G 7 HOH 51 451 61 HOH HOH H . G 7 HOH 52 452 62 HOH HOH H . G 7 HOH 53 453 63 HOH HOH H . G 7 HOH 54 454 65 HOH HOH H . G 7 HOH 55 455 67 HOH HOH H . G 7 HOH 56 456 69 HOH HOH H . G 7 HOH 57 457 70 HOH HOH H . G 7 HOH 58 458 71 HOH HOH H . G 7 HOH 59 459 73 HOH HOH H . G 7 HOH 60 460 74 HOH HOH H . G 7 HOH 61 461 75 HOH HOH H . G 7 HOH 62 462 77 HOH HOH H . G 7 HOH 63 463 79 HOH HOH H . G 7 HOH 64 464 80 HOH HOH H . G 7 HOH 65 465 82 HOH HOH H . G 7 HOH 66 466 83 HOH HOH H . G 7 HOH 67 467 84 HOH HOH H . G 7 HOH 68 468 85 HOH HOH H . G 7 HOH 69 469 87 HOH HOH H . G 7 HOH 70 470 90 HOH HOH H . G 7 HOH 71 471 93 HOH HOH H . G 7 HOH 72 472 94 HOH HOH H . G 7 HOH 73 473 95 HOH HOH H . G 7 HOH 74 474 98 HOH HOH H . G 7 HOH 75 475 99 HOH HOH H . G 7 HOH 76 476 100 HOH HOH H . G 7 HOH 77 477 101 HOH HOH H . H 7 HOH 1 101 21 HOH HOH L . H 7 HOH 2 102 27 HOH HOH L . H 7 HOH 3 103 48 HOH HOH L . H 7 HOH 4 104 60 HOH HOH L . H 7 HOH 5 105 66 HOH HOH L . H 7 HOH 6 106 81 HOH HOH L . H 7 HOH 7 107 86 HOH HOH L . H 7 HOH 8 108 91 HOH HOH L . I 7 HOH 1 101 12 HOH HOH D . I 7 HOH 2 102 22 HOH HOH D . I 7 HOH 3 103 39 HOH HOH D . I 7 HOH 4 104 45 HOH HOH D . I 7 HOH 5 105 46 HOH HOH D . I 7 HOH 6 106 49 HOH HOH D . I 7 HOH 7 107 64 HOH HOH D . I 7 HOH 8 108 68 HOH HOH D . I 7 HOH 9 109 72 HOH HOH D . I 7 HOH 10 110 76 HOH HOH D . I 7 HOH 11 111 78 HOH HOH D . I 7 HOH 12 112 92 HOH HOH D . I 7 HOH 13 113 97 HOH HOH D . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 PHASER phasing . ? 2 REFMAC refinement . ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _cell.entry_id 4I7Y _cell.length_a 48.144 _cell.length_b 81.904 _cell.length_c 53.720 _cell.angle_alpha 90.00 _cell.angle_beta 99.66 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4I7Y _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4I7Y _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.46 _exptl_crystal.density_percent_sol 50.10 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '14% PEG 3350, 0.2 M sodium citrate, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2011-03-21 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.2651 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ELETTRA BEAMLINE 5.2R' _diffrn_source.pdbx_synchrotron_site ELETTRA _diffrn_source.pdbx_synchrotron_beamline 5.2R _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.2651 # _reflns.entry_id 4I7Y _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_high 2.40 _reflns.d_resolution_low 50.0 _reflns.number_obs 16132 _reflns.number_all 16132 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_low _reflns_shell.d_res_high _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.49 2.40 98.9 ? ? ? ? ? ? ? ? ? ? 1 1 2.59 2.49 99.7 ? ? ? ? ? ? ? ? ? ? 2 1 2.70 2.59 99.9 ? ? ? ? ? ? ? ? ? ? 3 1 2.85 2.70 99.9 ? ? ? ? ? ? ? ? ? ? 4 1 3.02 2.85 100.0 ? ? ? ? ? ? ? ? ? ? 5 1 3.26 3.02 99.9 ? ? ? ? ? ? ? ? ? ? 6 1 3.58 3.26 99.9 ? ? ? ? ? ? ? ? ? ? 7 1 4.10 3.58 99.9 ? ? ? ? ? ? ? ? ? ? 8 1 5.17 4.10 99.9 ? ? ? ? ? ? ? ? ? ? 9 1 50.0 5.17 99.6 ? ? ? ? ? ? ? ? ? ? 10 1 # _refine.entry_id 4I7Y _refine.ls_number_reflns_obs 16132 _refine.ls_number_reflns_all 16132 _refine.pdbx_ls_sigma_I . _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_high 2.40 _refine.ls_d_res_low 50.0 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.184 _refine.ls_R_factor_all 0.184 _refine.ls_R_factor_R_work 0.181 _refine.ls_R_factor_R_free 0.249 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 765 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2244 _refine_hist.pdbx_number_atoms_nucleic_acid 564 _refine_hist.pdbx_number_atoms_ligand 45 _refine_hist.number_atoms_solvent 98 _refine_hist.number_atoms_total 2951 _refine_hist.d_res_high 2.40 _refine_hist.d_res_low 50.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.011 ? ? ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.687 ? ? ? ? 'X-RAY DIFFRACTION' r_chiral_restr 0.118 ? ? ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.020 ? ? ? ? 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4I7Y _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4I7Y _struct.title 'Crystal Structure of Human Alpha Thrombin in Complex with a 27-mer Aptamer Bound to Exosite II' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4I7Y _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR/DNA' _struct_keywords.text ;Protein-DNA complex, serine protease, blood coagulation, aptamer, hydrolase-hydrolase inhibitor-DNA complex, serine protease fold, DNA aptamer, blood, G-quadruplex, duplex-quadruplex junction ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 7 ? I N N 7 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP THRB_HUMAN P00734 1 ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; 364 ? 2 UNP THRB_HUMAN P00734 2 TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR 328 ? 3 PDB 4I7Y 4I7Y 3 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4I7Y H 1 ? 259 ? P00734 364 ? 622 ? 16 247 2 2 4I7Y L 1 ? 36 ? P00734 328 ? 363 ? -5 17 3 3 4I7Y D 1 ? 27 ? 4I7Y 1 ? 27 ? 1 27 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4620 ? 1 MORE -23 ? 1 'SSA (A^2)' 15480 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 41 ? LEU A 45 ? ALA H 55 LEU H 59 1 ? 5 HELX_P HELX_P2 2 PRO A 48 B ASP A 51 E PRO H 60 ASP H 60 5 ? 4 HELX_P HELX_P3 3 THR A 55 I ASN A 57 ? THR H 60 ASN H 62 5 ? 3 HELX_P HELX_P4 4 ASP A 122 ? LEU A 130 ? ASP H 125 LEU H 130 1 ? 9 HELX_P HELX_P5 5 GLU A 169 ? SER A 176 ? GLU H 164 SER H 171 1 ? 8 HELX_P HELX_P6 6 LEU A 246 ? GLY A 258 ? LEU H 234 GLY H 246 1 ? 13 HELX_P HELX_P7 7 PHE B 15 ? SER B 19 ? PHE L 7 SER L 11 5 ? 5 HELX_P HELX_P8 8 THR B 24 B ILE B 33 K THR L 14 ILE L 14 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 28 SG ? ? ? 1_555 A CYS 44 SG ? ? H CYS 42 H CYS 58 1_555 ? ? ? ? ? ? ? 2.065 ? ? disulf2 disulf ? ? A CYS 119 SG ? ? ? 1_555 B CYS 9 SG ? ? H CYS 122 L CYS 1 1_555 ? ? ? ? ? ? ? 2.040 ? ? disulf3 disulf ? ? A CYS 173 SG ? ? ? 1_555 A CYS 187 SG ? ? H CYS 168 H CYS 182 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf4 disulf ? ? A CYS 201 SG ? ? ? 1_555 A CYS 231 SG ? ? H CYS 191 H CYS 220 1_555 ? ? ? ? ? ? ? 2.050 ? ? covale1 covale one ? A HIS 43 NE2 ? ? ? 1_555 D 0G6 . C3 ? ? H HIS 57 H 0G6 302 1_555 ? ? ? ? ? ? ? 1.499 ? ? covale2 covale one ? A ASN 53 ND2 ? G ? 1_555 F NAG . C1 ? ? H ASN 60 L NAG 301 1_555 ? ? ? ? ? ? ? 1.456 ? N-Glycosylation covale3 covale none ? A SER 205 OG ? ? ? 1_555 D 0G6 . C2 ? ? H SER 195 H 0G6 302 1_555 ? ? ? ? ? ? ? 1.415 ? ? metalc1 metalc ? ? A ARG 233 O ? ? ? 1_555 E NA . NA ? ? H ARG 221 H NA 303 1_555 ? ? ? ? ? ? ? 2.427 ? ? metalc2 metalc ? ? A LYS 236 O ? ? ? 1_555 E NA . NA ? ? H LYS 224 H NA 303 1_555 ? ? ? ? ? ? ? 2.273 ? ? metalc3 metalc ? ? E NA . NA ? ? ? 1_555 G HOH . O ? ? H NA 303 H HOH 411 1_555 ? ? ? ? ? ? ? 2.349 ? ? metalc4 metalc ? ? E NA . NA ? ? ? 1_555 G HOH . O ? ? H NA 303 H HOH 416 1_555 ? ? ? ? ? ? ? 2.197 ? ? metalc5 metalc ? ? E NA . NA ? ? ? 1_555 G HOH . O ? ? H NA 303 H HOH 429 1_555 ? ? ? ? ? ? ? 2.498 ? ? metalc6 metalc ? ? E NA . NA ? ? ? 1_555 G HOH . O ? ? H NA 303 H HOH 453 1_555 ? ? ? ? ? ? ? 2.255 ? ? hydrog1 hydrog ? ? C DG 1 N1 ? ? ? 1_555 C DC 27 N3 ? ? D DG 1 D DC 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DG 1 N2 ? ? ? 1_555 C DC 27 O2 ? ? D DG 1 D DC 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DG 1 O6 ? ? ? 1_555 C DC 27 N4 ? ? D DG 1 D DC 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DT 2 N3 ? ? ? 1_555 C DA 26 N1 ? ? D DT 2 D DA 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DT 2 O4 ? ? ? 1_555 C DA 26 N6 ? ? D DT 2 D DA 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DC 3 N3 ? ? ? 1_555 C DG 25 N1 ? ? D DC 3 D DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DC 3 N4 ? ? ? 1_555 C DG 25 O6 ? ? D DC 3 D DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DC 3 O2 ? ? ? 1_555 C DG 25 N2 ? ? D DC 3 D DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DC 4 N3 ? ? ? 1_555 C DG 23 N1 ? ? D DC 4 D DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DC 4 N4 ? ? ? 1_555 C DG 23 O6 ? ? D DC 4 D DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DC 4 O2 ? ? ? 1_555 C DG 23 N2 ? ? D DC 4 D DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DG 5 N2 ? ? ? 1_555 C DG 7 O6 ? ? D DG 5 D DG 7 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? ? hydrog13 hydrog ? ? C DG 5 N1 ? ? ? 1_555 C DG 16 N7 ? ? D DG 5 D DG 16 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog14 hydrog ? ? C DG 5 N2 ? ? ? 1_555 C DG 16 O6 ? ? D DG 5 D DG 16 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog15 hydrog ? ? C DT 6 N3 ? ? ? 1_555 C DA 15 N7 ? ? D DT 6 D DA 15 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog16 hydrog ? ? C DT 6 O2 ? ? ? 1_555 C DA 15 N6 ? ? D DT 6 D DA 15 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog17 hydrog ? ? C DG 8 N7 ? ? ? 1_555 C DG 11 N2 ? ? D DG 8 D DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? C DG 8 O6 ? ? ? 1_555 C DG 11 N1 ? ? D DG 8 D DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? C DG 8 N1 ? ? ? 1_555 C DG 20 O6 ? ? D DG 8 D DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? C DG 8 N2 ? ? ? 1_555 C DG 20 N7 ? ? D DG 8 D DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? C DA 10 N1 ? ? ? 1_555 C DT 19 N3 ? ? D DA 10 D DT 19 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog22 hydrog ? ? C DA 10 N6 ? ? ? 1_555 C DT 19 O2 ? ? D DA 10 D DT 19 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog23 hydrog ? ? C DG 11 N7 ? ? ? 1_555 C DG 17 N2 ? ? D DG 11 D DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? C DG 11 O6 ? ? ? 1_555 C DG 17 N1 ? ? D DG 11 D DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog25 hydrog ? ? C DG 17 N7 ? ? ? 1_555 C DG 20 N2 ? ? D DG 17 D DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog26 hydrog ? ? C DG 17 O6 ? ? ? 1_555 C DG 20 N1 ? ? D DG 17 D DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A ARG 233 ? H ARG 221 ? 1_555 NA ? E NA . ? H NA 303 ? 1_555 O ? A LYS 236 ? H LYS 224 ? 1_555 87.8 ? 2 O ? A ARG 233 ? H ARG 221 ? 1_555 NA ? E NA . ? H NA 303 ? 1_555 O ? G HOH . ? H HOH 411 ? 1_555 161.6 ? 3 O ? A LYS 236 ? H LYS 224 ? 1_555 NA ? E NA . ? H NA 303 ? 1_555 O ? G HOH . ? H HOH 411 ? 1_555 83.6 ? 4 O ? A ARG 233 ? H ARG 221 ? 1_555 NA ? E NA . ? H NA 303 ? 1_555 O ? G HOH . ? H HOH 416 ? 1_555 95.8 ? 5 O ? A LYS 236 ? H LYS 224 ? 1_555 NA ? E NA . ? H NA 303 ? 1_555 O ? G HOH . ? H HOH 416 ? 1_555 82.5 ? 6 O ? G HOH . ? H HOH 411 ? 1_555 NA ? E NA . ? H NA 303 ? 1_555 O ? G HOH . ? H HOH 416 ? 1_555 99.1 ? 7 O ? A ARG 233 ? H ARG 221 ? 1_555 NA ? E NA . ? H NA 303 ? 1_555 O ? G HOH . ? H HOH 429 ? 1_555 76.6 ? 8 O ? A LYS 236 ? H LYS 224 ? 1_555 NA ? E NA . ? H NA 303 ? 1_555 O ? G HOH . ? H HOH 429 ? 1_555 105.7 ? 9 O ? G HOH . ? H HOH 411 ? 1_555 NA ? E NA . ? H NA 303 ? 1_555 O ? G HOH . ? H HOH 429 ? 1_555 90.1 ? 10 O ? G HOH . ? H HOH 416 ? 1_555 NA ? E NA . ? H NA 303 ? 1_555 O ? G HOH . ? H HOH 429 ? 1_555 168.4 ? 11 O ? A ARG 233 ? H ARG 221 ? 1_555 NA ? E NA . ? H NA 303 ? 1_555 O ? G HOH . ? H HOH 453 ? 1_555 93.9 ? 12 O ? A LYS 236 ? H LYS 224 ? 1_555 NA ? E NA . ? H NA 303 ? 1_555 O ? G HOH . ? H HOH 453 ? 1_555 170.8 ? 13 O ? G HOH . ? H HOH 411 ? 1_555 NA ? E NA . ? H NA 303 ? 1_555 O ? G HOH . ? H HOH 453 ? 1_555 97.1 ? 14 O ? G HOH . ? H HOH 416 ? 1_555 NA ? E NA . ? H NA 303 ? 1_555 O ? G HOH . ? H HOH 453 ? 1_555 88.4 ? 15 O ? G HOH . ? H HOH 429 ? 1_555 NA ? E NA . ? H NA 303 ? 1_555 O ? G HOH . ? H HOH 453 ? 1_555 83.4 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG F . ? ASN A 53 ? NAG L 301 ? 1_555 ASN H 60 G 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 0G6 D . ? HIS A 43 ? 0G6 H 302 ? 1_555 HIS H 57 ? 1_555 C3 NE2 HIS 2 0G6 None 'Covalent chemical modification' 3 0G6 D . ? SER A 205 ? 0G6 H 302 ? 1_555 SER H 195 ? 1_555 C2 OG SER 3 0G6 None 'Covalent chemical modification' 4 CYS A 28 ? CYS A 44 ? CYS H 42 ? 1_555 CYS H 58 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS A 119 ? CYS B 9 ? CYS H 122 ? 1_555 CYS L 1 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS A 173 ? CYS A 187 ? CYS H 168 ? 1_555 CYS H 182 ? 1_555 SG SG . . . None 'Disulfide bridge' 7 CYS A 201 ? CYS A 231 ? CYS H 191 ? 1_555 CYS H 220 ? 1_555 SG SG . . . None 'Disulfide bridge' # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 22 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code A _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 36 _struct_mon_prot_cis.auth_asym_id H _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 23 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 37 _struct_mon_prot_cis.pdbx_auth_asym_id_2 H _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -5.44 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 7 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 5 ? ASP A 6 ? SER H 20 ASP H 21 A 2 GLN A 161 ? PRO A 166 ? GLN H 156 PRO H 161 A 3 LYS A 135 ? GLY A 140 ? LYS H 135 GLY H 140 A 4 PRO A 208 ? LYS A 212 ? PRO H 198 LYS H 202 A 5 TRP A 219 ? TRP A 227 ? TRP H 207 TRP H 215 A 6 GLY A 238 ? HIS A 242 ? GLY H 226 HIS H 230 A 7 MET A 185 ? ALA A 188 ? MET H 180 ALA H 183 B 1 LYS A 77 ? SER A 79 ? LYS H 81 SER H 83 B 2 LEU A 59 ? ILE A 63 ? LEU H 64 ILE H 68 B 3 GLN A 15 ? ARG A 20 ? GLN H 30 ARG H 35 B 4 GLU A 25 ? LEU A 32 ? GLU H 39 LEU H 46 B 5 TRP A 37 ? THR A 40 ? TRP H 51 THR H 54 B 6 ALA A 101 ? LEU A 105 ? ALA H 104 LEU H 108 B 7 LEU A 81 ? ILE A 86 ? LEU H 85 ILE H 90 C 1 LEU A 46 ? TYR A 47 A LEU H 60 TYR H 60 C 2 LYS A 52 F ASN A 53 G LYS H 60 ASN H 60 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER A 5 ? N SER H 20 O VAL A 162 ? O VAL H 157 A 2 3 O LEU A 165 ? O LEU H 160 N GLY A 136 ? N GLY H 136 A 3 4 N ARG A 137 ? N ARG H 137 O VAL A 210 ? O VAL H 200 A 4 5 N MET A 211 ? N MET H 201 O TYR A 220 ? O TYR H 208 A 5 6 N TRP A 227 ? N TRP H 215 O PHE A 239 ? O PHE H 227 A 6 7 O TYR A 240 ? O TYR H 228 N PHE A 186 ? N PHE H 181 B 1 2 O LYS A 77 ? O LYS H 81 N ILE A 63 ? N ILE H 68 B 2 3 O LEU A 60 ? O LEU H 65 N PHE A 19 ? N PHE H 34 B 3 4 N ARG A 20 ? N ARG H 35 O GLU A 25 ? O GLU H 39 B 4 5 N SER A 31 ? N SER H 45 O LEU A 39 ? O LEU H 53 B 5 6 N VAL A 38 ? N VAL H 52 O MET A 103 ? O MET H 106 B 6 7 O LYS A 104 ? O LYS H 107 N GLU A 82 ? N GLU H 86 C 1 2 N TYR A 47 A N TYR H 60 O LYS A 52 F O LYS H 60 # _pdbx_entry_details.entry_id 4I7Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER H 48 ? ? -170.79 -172.31 2 1 HIS H 71 ? ? -124.50 -54.59 3 1 ASN H 78 ? ? 55.32 19.96 4 1 ILE H 79 ? ? -124.19 -58.16 5 1 ASN H 98 ? ? -151.78 21.59 6 1 GLU H 186 B ? -68.28 5.14 7 1 LYS H 186 D ? -45.60 151.87 8 1 ASN H 205 ? ? -88.21 38.54 9 1 SER H 214 ? ? -124.23 -61.49 10 1 ARG H 233 ? ? -39.39 -34.11 11 1 PHE L 7 ? ? -129.93 -85.11 12 1 SER L 11 ? ? 34.85 50.22 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 ARG _pdbx_validate_peptide_omega.auth_asym_id_1 H _pdbx_validate_peptide_omega.auth_seq_id_1 75 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 TYR _pdbx_validate_peptide_omega.auth_asym_id_2 H _pdbx_validate_peptide_omega.auth_seq_id_2 76 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 148.58 # _pdbx_molecule_features.prd_id PRD_000020 _pdbx_molecule_features.name D-Phe-Pro-Arg-CH2Cl _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000020 _pdbx_molecule.asym_id D # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id ASN _pdbx_struct_mod_residue.label_seq_id 53 _pdbx_struct_mod_residue.auth_asym_id H _pdbx_struct_mod_residue.auth_comp_id ASN _pdbx_struct_mod_residue.auth_seq_id 60 _pdbx_struct_mod_residue.PDB_ins_code G _pdbx_struct_mod_residue.parent_comp_id ASN _pdbx_struct_mod_residue.details 'GLYCOSYLATION SITE' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 H THR 146 A A THR 147 2 1 Y 1 H TRP 146 B A TRP 148 3 1 Y 1 H THR 146 C A THR 149 4 1 Y 1 H ALA 146 D A ALA 150 5 1 Y 1 H ASN 146 E A ASN 151 6 1 Y 1 H VAL 146 F A VAL 152 7 1 Y 1 H GLY 146 G A GLY 153 8 1 Y 1 H LYS 146 H A LYS 154 9 1 Y 1 H GLU 247 ? A GLU 259 10 1 Y 1 L THR -5 ? B THR 1 11 1 Y 1 L PHE -4 ? B PHE 2 12 1 Y 1 L GLY -3 ? B GLY 3 13 1 Y 1 L SER -2 ? B SER 4 14 1 Y 1 L GLY -1 ? B GLY 5 15 1 Y 1 L GLU 0 ? B GLU 6 16 1 Y 1 L ASP 15 ? B ASP 34 17 1 Y 1 L GLY 16 ? B GLY 35 18 1 Y 1 L ARG 17 ? B ARG 36 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 0G6 N N N N 1 0G6 CA C N R 2 0G6 C C N N 3 0G6 O O N N 4 0G6 CB C N N 5 0G6 CG C Y N 6 0G6 CD1 C Y N 7 0G6 CD2 C Y N 8 0G6 CE1 C Y N 9 0G6 CE2 C Y N 10 0G6 CZ C Y N 11 0G6 N1 N N N 12 0G6 CA1 C N S 13 0G6 C1 C N N 14 0G6 O1 O N N 15 0G6 CB1 C N N 16 0G6 CG1 C N N 17 0G6 CD C N N 18 0G6 N2 N N N 19 0G6 CA2 C N S 20 0G6 C2 C N S 21 0G6 O2 O N N 22 0G6 CB2 C N N 23 0G6 CG2 C N N 24 0G6 CD3 C N N 25 0G6 NE N N N 26 0G6 CZ1 C N N 27 0G6 NH1 N N N 28 0G6 NH2 N N N 29 0G6 C3 C N N 30 0G6 CL CL N N 31 0G6 H H N N 32 0G6 H2 H N N 33 0G6 HA H N N 34 0G6 HB2 H N N 35 0G6 HB3 H N N 36 0G6 HD1 H N N 37 0G6 HD2 H N N 38 0G6 HE1 H N N 39 0G6 HE2 H N N 40 0G6 HZ H N N 41 0G6 HA1 H N N 42 0G6 HB21 H N N 43 0G6 HB31 H N N 44 0G6 HG2 H N N 45 0G6 HG3 H N N 46 0G6 HD21 H N N 47 0G6 HD3 H N N 48 0G6 H1 H N N 49 0G6 HA2 H N N 50 0G6 HB22 H N N 51 0G6 HB32 H N N 52 0G6 HG21 H N N 53 0G6 HG31 H N N 54 0G6 HD22 H N N 55 0G6 HD31 H N N 56 0G6 HE H N N 57 0G6 HH11 H N N 58 0G6 HH12 H N N 59 0G6 HH21 H N N 60 0G6 HH22 H N N 61 0G6 H11 H N N 62 0G6 H21 H N N 63 0G6 H33 H N N 64 0G6 H34 H N N 65 ALA N N N N 66 ALA CA C N S 67 ALA C C N N 68 ALA O O N N 69 ALA CB C N N 70 ALA OXT O N N 71 ALA H H N N 72 ALA H2 H N N 73 ALA HA H N N 74 ALA HB1 H N N 75 ALA HB2 H N N 76 ALA HB3 H N N 77 ALA HXT H N N 78 ARG N N N N 79 ARG CA C N S 80 ARG C C N N 81 ARG O O N N 82 ARG CB C N N 83 ARG CG C N N 84 ARG CD C N N 85 ARG NE N N N 86 ARG CZ C N N 87 ARG NH1 N N N 88 ARG NH2 N N N 89 ARG OXT O N N 90 ARG H H N N 91 ARG H2 H N N 92 ARG HA H N N 93 ARG HB2 H N N 94 ARG HB3 H N N 95 ARG HG2 H N N 96 ARG HG3 H N N 97 ARG HD2 H N N 98 ARG HD3 H N N 99 ARG HE H N N 100 ARG HH11 H N N 101 ARG HH12 H N N 102 ARG HH21 H N N 103 ARG HH22 H N N 104 ARG HXT H N N 105 ASN N N N N 106 ASN CA C N S 107 ASN C C N N 108 ASN O O N N 109 ASN CB C N N 110 ASN CG C N N 111 ASN OD1 O N N 112 ASN ND2 N N N 113 ASN OXT O N N 114 ASN H H N N 115 ASN H2 H N N 116 ASN HA H N N 117 ASN HB2 H N N 118 ASN HB3 H N N 119 ASN HD21 H N N 120 ASN HD22 H N N 121 ASN HXT H N N 122 ASP N N N N 123 ASP CA C N S 124 ASP C C N N 125 ASP O O N N 126 ASP CB C N N 127 ASP CG C N N 128 ASP OD1 O N N 129 ASP OD2 O N N 130 ASP OXT O N N 131 ASP H H N N 132 ASP H2 H N N 133 ASP HA H N N 134 ASP HB2 H N N 135 ASP HB3 H N N 136 ASP HD2 H N N 137 ASP HXT H N N 138 CYS N N N N 139 CYS CA C N R 140 CYS C C N N 141 CYS O O N N 142 CYS CB C N N 143 CYS SG S N N 144 CYS OXT O N N 145 CYS H H N N 146 CYS H2 H N N 147 CYS HA H N N 148 CYS HB2 H N N 149 CYS HB3 H N N 150 CYS HG H N N 151 CYS HXT H N N 152 DA OP3 O N N 153 DA P P N N 154 DA OP1 O N N 155 DA OP2 O N N 156 DA "O5'" O N N 157 DA "C5'" C N N 158 DA "C4'" C N R 159 DA "O4'" O N N 160 DA "C3'" C N S 161 DA "O3'" O N N 162 DA "C2'" C N N 163 DA "C1'" C N R 164 DA N9 N Y N 165 DA C8 C Y N 166 DA N7 N Y N 167 DA C5 C Y N 168 DA C6 C Y N 169 DA N6 N N N 170 DA N1 N Y N 171 DA C2 C Y N 172 DA N3 N Y N 173 DA C4 C Y N 174 DA HOP3 H N N 175 DA HOP2 H N N 176 DA "H5'" H N N 177 DA "H5''" H N N 178 DA "H4'" H N N 179 DA "H3'" H N N 180 DA "HO3'" H N N 181 DA "H2'" H N N 182 DA "H2''" H N N 183 DA "H1'" H N N 184 DA H8 H N N 185 DA H61 H N N 186 DA H62 H N N 187 DA H2 H N N 188 DC OP3 O N N 189 DC P P N N 190 DC OP1 O N N 191 DC OP2 O N N 192 DC "O5'" O N N 193 DC "C5'" C N N 194 DC "C4'" C N R 195 DC "O4'" O N N 196 DC "C3'" C N S 197 DC "O3'" O N N 198 DC "C2'" C N N 199 DC "C1'" C N R 200 DC N1 N N N 201 DC C2 C N N 202 DC O2 O N N 203 DC N3 N N N 204 DC C4 C N N 205 DC N4 N N N 206 DC C5 C N N 207 DC C6 C N N 208 DC HOP3 H N N 209 DC HOP2 H N N 210 DC "H5'" H N N 211 DC "H5''" H N N 212 DC "H4'" H N N 213 DC "H3'" H N N 214 DC "HO3'" H N N 215 DC "H2'" H N N 216 DC "H2''" H N N 217 DC "H1'" H N N 218 DC H41 H N N 219 DC H42 H N N 220 DC H5 H N N 221 DC H6 H N N 222 DG OP3 O N N 223 DG P P N N 224 DG OP1 O N N 225 DG OP2 O N N 226 DG "O5'" O N N 227 DG "C5'" C N N 228 DG "C4'" C N R 229 DG "O4'" O N N 230 DG "C3'" C N S 231 DG "O3'" O N N 232 DG "C2'" C N N 233 DG "C1'" C N R 234 DG N9 N Y N 235 DG C8 C Y N 236 DG N7 N Y N 237 DG C5 C Y N 238 DG C6 C N N 239 DG O6 O N N 240 DG N1 N N N 241 DG C2 C N N 242 DG N2 N N N 243 DG N3 N N N 244 DG C4 C Y N 245 DG HOP3 H N N 246 DG HOP2 H N N 247 DG "H5'" H N N 248 DG "H5''" H N N 249 DG "H4'" H N N 250 DG "H3'" H N N 251 DG "HO3'" H N N 252 DG "H2'" H N N 253 DG "H2''" H N N 254 DG "H1'" H N N 255 DG H8 H N N 256 DG H1 H N N 257 DG H21 H N N 258 DG H22 H N N 259 DT OP3 O N N 260 DT P P N N 261 DT OP1 O N N 262 DT OP2 O N N 263 DT "O5'" O N N 264 DT "C5'" C N N 265 DT "C4'" C N R 266 DT "O4'" O N N 267 DT "C3'" C N S 268 DT "O3'" O N N 269 DT "C2'" C N N 270 DT "C1'" C N R 271 DT N1 N N N 272 DT C2 C N N 273 DT O2 O N N 274 DT N3 N N N 275 DT C4 C N N 276 DT O4 O N N 277 DT C5 C N N 278 DT C7 C N N 279 DT C6 C N N 280 DT HOP3 H N N 281 DT HOP2 H N N 282 DT "H5'" H N N 283 DT "H5''" H N N 284 DT "H4'" H N N 285 DT "H3'" H N N 286 DT "HO3'" H N N 287 DT "H2'" H N N 288 DT "H2''" H N N 289 DT "H1'" H N N 290 DT H3 H N N 291 DT H71 H N N 292 DT H72 H N N 293 DT H73 H N N 294 DT H6 H N N 295 GLN N N N N 296 GLN CA C N S 297 GLN C C N N 298 GLN O O N N 299 GLN CB C N N 300 GLN CG C N N 301 GLN CD C N N 302 GLN OE1 O N N 303 GLN NE2 N N N 304 GLN OXT O N N 305 GLN H H N N 306 GLN H2 H N N 307 GLN HA H N N 308 GLN HB2 H N N 309 GLN HB3 H N N 310 GLN HG2 H N N 311 GLN HG3 H N N 312 GLN HE21 H N N 313 GLN HE22 H N N 314 GLN HXT H N N 315 GLU N N N N 316 GLU CA C N S 317 GLU C C N N 318 GLU O O N N 319 GLU CB C N N 320 GLU CG C N N 321 GLU CD C N N 322 GLU OE1 O N N 323 GLU OE2 O N N 324 GLU OXT O N N 325 GLU H H N N 326 GLU H2 H N N 327 GLU HA H N N 328 GLU HB2 H N N 329 GLU HB3 H N N 330 GLU HG2 H N N 331 GLU HG3 H N N 332 GLU HE2 H N N 333 GLU HXT H N N 334 GLY N N N N 335 GLY CA C N N 336 GLY C C N N 337 GLY O O N N 338 GLY OXT O N N 339 GLY H H N N 340 GLY H2 H N N 341 GLY HA2 H N N 342 GLY HA3 H N N 343 GLY HXT H N N 344 HIS N N N N 345 HIS CA C N S 346 HIS C C N N 347 HIS O O N N 348 HIS CB C N N 349 HIS CG C Y N 350 HIS ND1 N Y N 351 HIS CD2 C Y N 352 HIS CE1 C Y N 353 HIS NE2 N Y N 354 HIS OXT O N N 355 HIS H H N N 356 HIS H2 H N N 357 HIS HA H N N 358 HIS HB2 H N N 359 HIS HB3 H N N 360 HIS HD1 H N N 361 HIS HD2 H N N 362 HIS HE1 H N N 363 HIS HE2 H N N 364 HIS HXT H N N 365 HOH O O N N 366 HOH H1 H N N 367 HOH H2 H N N 368 ILE N N N N 369 ILE CA C N S 370 ILE C C N N 371 ILE O O N N 372 ILE CB C N S 373 ILE CG1 C N N 374 ILE CG2 C N N 375 ILE CD1 C N N 376 ILE OXT O N N 377 ILE H H N N 378 ILE H2 H N N 379 ILE HA H N N 380 ILE HB H N N 381 ILE HG12 H N N 382 ILE HG13 H N N 383 ILE HG21 H N N 384 ILE HG22 H N N 385 ILE HG23 H N N 386 ILE HD11 H N N 387 ILE HD12 H N N 388 ILE HD13 H N N 389 ILE HXT H N N 390 LEU N N N N 391 LEU CA C N S 392 LEU C C N N 393 LEU O O N N 394 LEU CB C N N 395 LEU CG C N N 396 LEU CD1 C N N 397 LEU CD2 C N N 398 LEU OXT O N N 399 LEU H H N N 400 LEU H2 H N N 401 LEU HA H N N 402 LEU HB2 H N N 403 LEU HB3 H N N 404 LEU HG H N N 405 LEU HD11 H N N 406 LEU HD12 H N N 407 LEU HD13 H N N 408 LEU HD21 H N N 409 LEU HD22 H N N 410 LEU HD23 H N N 411 LEU HXT H N N 412 LYS N N N N 413 LYS CA C N S 414 LYS C C N N 415 LYS O O N N 416 LYS CB C N N 417 LYS CG C N N 418 LYS CD C N N 419 LYS CE C N N 420 LYS NZ N N N 421 LYS OXT O N N 422 LYS H H N N 423 LYS H2 H N N 424 LYS HA H N N 425 LYS HB2 H N N 426 LYS HB3 H N N 427 LYS HG2 H N N 428 LYS HG3 H N N 429 LYS HD2 H N N 430 LYS HD3 H N N 431 LYS HE2 H N N 432 LYS HE3 H N N 433 LYS HZ1 H N N 434 LYS HZ2 H N N 435 LYS HZ3 H N N 436 LYS HXT H N N 437 MET N N N N 438 MET CA C N S 439 MET C C N N 440 MET O O N N 441 MET CB C N N 442 MET CG C N N 443 MET SD S N N 444 MET CE C N N 445 MET OXT O N N 446 MET H H N N 447 MET H2 H N N 448 MET HA H N N 449 MET HB2 H N N 450 MET HB3 H N N 451 MET HG2 H N N 452 MET HG3 H N N 453 MET HE1 H N N 454 MET HE2 H N N 455 MET HE3 H N N 456 MET HXT H N N 457 NA NA NA N N 458 NAG C1 C N R 459 NAG C2 C N R 460 NAG C3 C N R 461 NAG C4 C N S 462 NAG C5 C N R 463 NAG C6 C N N 464 NAG C7 C N N 465 NAG C8 C N N 466 NAG N2 N N N 467 NAG O1 O N N 468 NAG O3 O N N 469 NAG O4 O N N 470 NAG O5 O N N 471 NAG O6 O N N 472 NAG O7 O N N 473 NAG H1 H N N 474 NAG H2 H N N 475 NAG H3 H N N 476 NAG H4 H N N 477 NAG H5 H N N 478 NAG H61 H N N 479 NAG H62 H N N 480 NAG H81 H N N 481 NAG H82 H N N 482 NAG H83 H N N 483 NAG HN2 H N N 484 NAG HO1 H N N 485 NAG HO3 H N N 486 NAG HO4 H N N 487 NAG HO6 H N N 488 PHE N N N N 489 PHE CA C N S 490 PHE C C N N 491 PHE O O N N 492 PHE CB C N N 493 PHE CG C Y N 494 PHE CD1 C Y N 495 PHE CD2 C Y N 496 PHE CE1 C Y N 497 PHE CE2 C Y N 498 PHE CZ C Y N 499 PHE OXT O N N 500 PHE H H N N 501 PHE H2 H N N 502 PHE HA H N N 503 PHE HB2 H N N 504 PHE HB3 H N N 505 PHE HD1 H N N 506 PHE HD2 H N N 507 PHE HE1 H N N 508 PHE HE2 H N N 509 PHE HZ H N N 510 PHE HXT H N N 511 PRO N N N N 512 PRO CA C N S 513 PRO C C N N 514 PRO O O N N 515 PRO CB C N N 516 PRO CG C N N 517 PRO CD C N N 518 PRO OXT O N N 519 PRO H H N N 520 PRO HA H N N 521 PRO HB2 H N N 522 PRO HB3 H N N 523 PRO HG2 H N N 524 PRO HG3 H N N 525 PRO HD2 H N N 526 PRO HD3 H N N 527 PRO HXT H N N 528 SER N N N N 529 SER CA C N S 530 SER C C N N 531 SER O O N N 532 SER CB C N N 533 SER OG O N N 534 SER OXT O N N 535 SER H H N N 536 SER H2 H N N 537 SER HA H N N 538 SER HB2 H N N 539 SER HB3 H N N 540 SER HG H N N 541 SER HXT H N N 542 THR N N N N 543 THR CA C N S 544 THR C C N N 545 THR O O N N 546 THR CB C N R 547 THR OG1 O N N 548 THR CG2 C N N 549 THR OXT O N N 550 THR H H N N 551 THR H2 H N N 552 THR HA H N N 553 THR HB H N N 554 THR HG1 H N N 555 THR HG21 H N N 556 THR HG22 H N N 557 THR HG23 H N N 558 THR HXT H N N 559 TRP N N N N 560 TRP CA C N S 561 TRP C C N N 562 TRP O O N N 563 TRP CB C N N 564 TRP CG C Y N 565 TRP CD1 C Y N 566 TRP CD2 C Y N 567 TRP NE1 N Y N 568 TRP CE2 C Y N 569 TRP CE3 C Y N 570 TRP CZ2 C Y N 571 TRP CZ3 C Y N 572 TRP CH2 C Y N 573 TRP OXT O N N 574 TRP H H N N 575 TRP H2 H N N 576 TRP HA H N N 577 TRP HB2 H N N 578 TRP HB3 H N N 579 TRP HD1 H N N 580 TRP HE1 H N N 581 TRP HE3 H N N 582 TRP HZ2 H N N 583 TRP HZ3 H N N 584 TRP HH2 H N N 585 TRP HXT H N N 586 TYR N N N N 587 TYR CA C N S 588 TYR C C N N 589 TYR O O N N 590 TYR CB C N N 591 TYR CG C Y N 592 TYR CD1 C Y N 593 TYR CD2 C Y N 594 TYR CE1 C Y N 595 TYR CE2 C Y N 596 TYR CZ C Y N 597 TYR OH O N N 598 TYR OXT O N N 599 TYR H H N N 600 TYR H2 H N N 601 TYR HA H N N 602 TYR HB2 H N N 603 TYR HB3 H N N 604 TYR HD1 H N N 605 TYR HD2 H N N 606 TYR HE1 H N N 607 TYR HE2 H N N 608 TYR HH H N N 609 TYR HXT H N N 610 VAL N N N N 611 VAL CA C N S 612 VAL C C N N 613 VAL O O N N 614 VAL CB C N N 615 VAL CG1 C N N 616 VAL CG2 C N N 617 VAL OXT O N N 618 VAL H H N N 619 VAL H2 H N N 620 VAL HA H N N 621 VAL HB H N N 622 VAL HG11 H N N 623 VAL HG12 H N N 624 VAL HG13 H N N 625 VAL HG21 H N N 626 VAL HG22 H N N 627 VAL HG23 H N N 628 VAL HXT H N N 629 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0G6 N CA sing N N 1 0G6 N H sing N N 2 0G6 N H2 sing N N 3 0G6 CA C sing N N 4 0G6 CA CB sing N N 5 0G6 CA HA sing N N 6 0G6 C O doub N N 7 0G6 C N1 sing N N 8 0G6 CB CG sing N N 9 0G6 CB HB2 sing N N 10 0G6 CB HB3 sing N N 11 0G6 CG CD1 doub Y N 12 0G6 CG CD2 sing Y N 13 0G6 CD1 CE1 sing Y N 14 0G6 CD1 HD1 sing N N 15 0G6 CD2 CE2 doub Y N 16 0G6 CD2 HD2 sing N N 17 0G6 CE1 CZ doub Y N 18 0G6 CE1 HE1 sing N N 19 0G6 CE2 CZ sing Y N 20 0G6 CE2 HE2 sing N N 21 0G6 CZ HZ sing N N 22 0G6 N1 CA1 sing N N 23 0G6 N1 CD sing N N 24 0G6 CA1 C1 sing N N 25 0G6 CA1 CB1 sing N N 26 0G6 CA1 HA1 sing N N 27 0G6 C1 O1 doub N N 28 0G6 C1 N2 sing N N 29 0G6 CB1 CG1 sing N N 30 0G6 CB1 HB21 sing N N 31 0G6 CB1 HB31 sing N N 32 0G6 CG1 CD sing N N 33 0G6 CG1 HG2 sing N N 34 0G6 CG1 HG3 sing N N 35 0G6 CD HD21 sing N N 36 0G6 CD HD3 sing N N 37 0G6 N2 CA2 sing N N 38 0G6 N2 H1 sing N N 39 0G6 CA2 C2 sing N N 40 0G6 CA2 CB2 sing N N 41 0G6 CA2 HA2 sing N N 42 0G6 C2 O2 sing N N 43 0G6 C2 C3 sing N N 44 0G6 CB2 CG2 sing N N 45 0G6 CB2 HB22 sing N N 46 0G6 CB2 HB32 sing N N 47 0G6 CG2 CD3 sing N N 48 0G6 CG2 HG21 sing N N 49 0G6 CG2 HG31 sing N N 50 0G6 CD3 NE sing N N 51 0G6 CD3 HD22 sing N N 52 0G6 CD3 HD31 sing N N 53 0G6 NE CZ1 sing N N 54 0G6 NE HE sing N N 55 0G6 CZ1 NH1 sing N N 56 0G6 CZ1 NH2 doub N N 57 0G6 NH1 HH11 sing N N 58 0G6 NH1 HH12 sing N N 59 0G6 NH2 HH21 sing N N 60 0G6 NH2 HH22 sing N N 61 0G6 C3 H11 sing N N 62 0G6 C3 H21 sing N N 63 0G6 CL C3 sing N N 64 0G6 C2 H33 sing N N 65 0G6 O2 H34 sing N N 66 ALA N CA sing N N 67 ALA N H sing N N 68 ALA N H2 sing N N 69 ALA CA C sing N N 70 ALA CA CB sing N N 71 ALA CA HA sing N N 72 ALA C O doub N N 73 ALA C OXT sing N N 74 ALA CB HB1 sing N N 75 ALA CB HB2 sing N N 76 ALA CB HB3 sing N N 77 ALA OXT HXT sing N N 78 ARG N CA sing N N 79 ARG N H sing N N 80 ARG N H2 sing N N 81 ARG CA C sing N N 82 ARG CA CB sing N N 83 ARG CA HA sing N N 84 ARG C O doub N N 85 ARG C OXT sing N N 86 ARG CB CG sing N N 87 ARG CB HB2 sing N N 88 ARG CB HB3 sing N N 89 ARG CG CD sing N N 90 ARG CG HG2 sing N N 91 ARG CG HG3 sing N N 92 ARG CD NE sing N N 93 ARG CD HD2 sing N N 94 ARG CD HD3 sing N N 95 ARG NE CZ sing N N 96 ARG NE HE sing N N 97 ARG CZ NH1 sing N N 98 ARG CZ NH2 doub N N 99 ARG NH1 HH11 sing N N 100 ARG NH1 HH12 sing N N 101 ARG NH2 HH21 sing N N 102 ARG NH2 HH22 sing N N 103 ARG OXT HXT sing N N 104 ASN N CA sing N N 105 ASN N H sing N N 106 ASN N H2 sing N N 107 ASN CA C sing N N 108 ASN CA CB sing N N 109 ASN CA HA sing N N 110 ASN C O doub N N 111 ASN C OXT sing N N 112 ASN CB CG sing N N 113 ASN CB HB2 sing N N 114 ASN CB HB3 sing N N 115 ASN CG OD1 doub N N 116 ASN CG ND2 sing N N 117 ASN ND2 HD21 sing N N 118 ASN ND2 HD22 sing N N 119 ASN OXT HXT sing N N 120 ASP N CA sing N N 121 ASP N H sing N N 122 ASP N H2 sing N N 123 ASP CA C sing N N 124 ASP CA CB sing N N 125 ASP CA HA sing N N 126 ASP C O doub N N 127 ASP C OXT sing N N 128 ASP CB CG sing N N 129 ASP CB HB2 sing N N 130 ASP CB HB3 sing N N 131 ASP CG OD1 doub N N 132 ASP CG OD2 sing N N 133 ASP OD2 HD2 sing N N 134 ASP OXT HXT sing N N 135 CYS N CA sing N N 136 CYS N H sing N N 137 CYS N H2 sing N N 138 CYS CA C sing N N 139 CYS CA CB sing N N 140 CYS CA HA sing N N 141 CYS C O doub N N 142 CYS C OXT sing N N 143 CYS CB SG sing N N 144 CYS CB HB2 sing N N 145 CYS CB HB3 sing N N 146 CYS SG HG sing N N 147 CYS OXT HXT sing N N 148 DA OP3 P sing N N 149 DA OP3 HOP3 sing N N 150 DA P OP1 doub N N 151 DA P OP2 sing N N 152 DA P "O5'" sing N N 153 DA OP2 HOP2 sing N N 154 DA "O5'" "C5'" sing N N 155 DA "C5'" "C4'" sing N N 156 DA "C5'" "H5'" sing N N 157 DA "C5'" "H5''" sing N N 158 DA "C4'" "O4'" sing N N 159 DA "C4'" "C3'" sing N N 160 DA "C4'" "H4'" sing N N 161 DA "O4'" "C1'" sing N N 162 DA "C3'" "O3'" sing N N 163 DA "C3'" "C2'" sing N N 164 DA "C3'" "H3'" sing N N 165 DA "O3'" "HO3'" sing N N 166 DA "C2'" "C1'" sing N N 167 DA "C2'" "H2'" sing N N 168 DA "C2'" "H2''" sing N N 169 DA "C1'" N9 sing N N 170 DA "C1'" "H1'" sing N N 171 DA N9 C8 sing Y N 172 DA N9 C4 sing Y N 173 DA C8 N7 doub Y N 174 DA C8 H8 sing N N 175 DA N7 C5 sing Y N 176 DA C5 C6 sing Y N 177 DA C5 C4 doub Y N 178 DA C6 N6 sing N N 179 DA C6 N1 doub Y N 180 DA N6 H61 sing N N 181 DA N6 H62 sing N N 182 DA N1 C2 sing Y N 183 DA C2 N3 doub Y N 184 DA C2 H2 sing N N 185 DA N3 C4 sing Y N 186 DC OP3 P sing N N 187 DC OP3 HOP3 sing N N 188 DC P OP1 doub N N 189 DC P OP2 sing N N 190 DC P "O5'" sing N N 191 DC OP2 HOP2 sing N N 192 DC "O5'" "C5'" sing N N 193 DC "C5'" "C4'" sing N N 194 DC "C5'" "H5'" sing N N 195 DC "C5'" "H5''" sing N N 196 DC "C4'" "O4'" sing N N 197 DC "C4'" "C3'" sing N N 198 DC "C4'" "H4'" sing N N 199 DC "O4'" "C1'" sing N N 200 DC "C3'" "O3'" sing N N 201 DC "C3'" "C2'" sing N N 202 DC "C3'" "H3'" sing N N 203 DC "O3'" "HO3'" sing N N 204 DC "C2'" "C1'" sing N N 205 DC "C2'" "H2'" sing N N 206 DC "C2'" "H2''" sing N N 207 DC "C1'" N1 sing N N 208 DC "C1'" "H1'" sing N N 209 DC N1 C2 sing N N 210 DC N1 C6 sing N N 211 DC C2 O2 doub N N 212 DC C2 N3 sing N N 213 DC N3 C4 doub N N 214 DC C4 N4 sing N N 215 DC C4 C5 sing N N 216 DC N4 H41 sing N N 217 DC N4 H42 sing N N 218 DC C5 C6 doub N N 219 DC C5 H5 sing N N 220 DC C6 H6 sing N N 221 DG OP3 P sing N N 222 DG OP3 HOP3 sing N N 223 DG P OP1 doub N N 224 DG P OP2 sing N N 225 DG P "O5'" sing N N 226 DG OP2 HOP2 sing N N 227 DG "O5'" "C5'" sing N N 228 DG "C5'" "C4'" sing N N 229 DG "C5'" "H5'" sing N N 230 DG "C5'" "H5''" sing N N 231 DG "C4'" "O4'" sing N N 232 DG "C4'" "C3'" sing N N 233 DG "C4'" "H4'" sing N N 234 DG "O4'" "C1'" sing N N 235 DG "C3'" "O3'" sing N N 236 DG "C3'" "C2'" sing N N 237 DG "C3'" "H3'" sing N N 238 DG "O3'" "HO3'" sing N N 239 DG "C2'" "C1'" sing N N 240 DG "C2'" "H2'" sing N N 241 DG "C2'" "H2''" sing N N 242 DG "C1'" N9 sing N N 243 DG "C1'" "H1'" sing N N 244 DG N9 C8 sing Y N 245 DG N9 C4 sing Y N 246 DG C8 N7 doub Y N 247 DG C8 H8 sing N N 248 DG N7 C5 sing Y N 249 DG C5 C6 sing N N 250 DG C5 C4 doub Y N 251 DG C6 O6 doub N N 252 DG C6 N1 sing N N 253 DG N1 C2 sing N N 254 DG N1 H1 sing N N 255 DG C2 N2 sing N N 256 DG C2 N3 doub N N 257 DG N2 H21 sing N N 258 DG N2 H22 sing N N 259 DG N3 C4 sing N N 260 DT OP3 P sing N N 261 DT OP3 HOP3 sing N N 262 DT P OP1 doub N N 263 DT P OP2 sing N N 264 DT P "O5'" sing N N 265 DT OP2 HOP2 sing N N 266 DT "O5'" "C5'" sing N N 267 DT "C5'" "C4'" sing N N 268 DT "C5'" "H5'" sing N N 269 DT "C5'" "H5''" sing N N 270 DT "C4'" "O4'" sing N N 271 DT "C4'" "C3'" sing N N 272 DT "C4'" "H4'" sing N N 273 DT "O4'" "C1'" sing N N 274 DT "C3'" "O3'" sing N N 275 DT "C3'" "C2'" sing N N 276 DT "C3'" "H3'" sing N N 277 DT "O3'" "HO3'" sing N N 278 DT "C2'" "C1'" sing N N 279 DT "C2'" "H2'" sing N N 280 DT "C2'" "H2''" sing N N 281 DT "C1'" N1 sing N N 282 DT "C1'" "H1'" sing N N 283 DT N1 C2 sing N N 284 DT N1 C6 sing N N 285 DT C2 O2 doub N N 286 DT C2 N3 sing N N 287 DT N3 C4 sing N N 288 DT N3 H3 sing N N 289 DT C4 O4 doub N N 290 DT C4 C5 sing N N 291 DT C5 C7 sing N N 292 DT C5 C6 doub N N 293 DT C7 H71 sing N N 294 DT C7 H72 sing N N 295 DT C7 H73 sing N N 296 DT C6 H6 sing N N 297 GLN N CA sing N N 298 GLN N H sing N N 299 GLN N H2 sing N N 300 GLN CA C sing N N 301 GLN CA CB sing N N 302 GLN CA HA sing N N 303 GLN C O doub N N 304 GLN C OXT sing N N 305 GLN CB CG sing N N 306 GLN CB HB2 sing N N 307 GLN CB HB3 sing N N 308 GLN CG CD sing N N 309 GLN CG HG2 sing N N 310 GLN CG HG3 sing N N 311 GLN CD OE1 doub N N 312 GLN CD NE2 sing N N 313 GLN NE2 HE21 sing N N 314 GLN NE2 HE22 sing N N 315 GLN OXT HXT sing N N 316 GLU N CA sing N N 317 GLU N H sing N N 318 GLU N H2 sing N N 319 GLU CA C sing N N 320 GLU CA CB sing N N 321 GLU CA HA sing N N 322 GLU C O doub N N 323 GLU C OXT sing N N 324 GLU CB CG sing N N 325 GLU CB HB2 sing N N 326 GLU CB HB3 sing N N 327 GLU CG CD sing N N 328 GLU CG HG2 sing N N 329 GLU CG HG3 sing N N 330 GLU CD OE1 doub N N 331 GLU CD OE2 sing N N 332 GLU OE2 HE2 sing N N 333 GLU OXT HXT sing N N 334 GLY N CA sing N N 335 GLY N H sing N N 336 GLY N H2 sing N N 337 GLY CA C sing N N 338 GLY CA HA2 sing N N 339 GLY CA HA3 sing N N 340 GLY C O doub N N 341 GLY C OXT sing N N 342 GLY OXT HXT sing N N 343 HIS N CA sing N N 344 HIS N H sing N N 345 HIS N H2 sing N N 346 HIS CA C sing N N 347 HIS CA CB sing N N 348 HIS CA HA sing N N 349 HIS C O doub N N 350 HIS C OXT sing N N 351 HIS CB CG sing N N 352 HIS CB HB2 sing N N 353 HIS CB HB3 sing N N 354 HIS CG ND1 sing Y N 355 HIS CG CD2 doub Y N 356 HIS ND1 CE1 doub Y N 357 HIS ND1 HD1 sing N N 358 HIS CD2 NE2 sing Y N 359 HIS CD2 HD2 sing N N 360 HIS CE1 NE2 sing Y N 361 HIS CE1 HE1 sing N N 362 HIS NE2 HE2 sing N N 363 HIS OXT HXT sing N N 364 HOH O H1 sing N N 365 HOH O H2 sing N N 366 ILE N CA sing N N 367 ILE N H sing N N 368 ILE N H2 sing N N 369 ILE CA C sing N N 370 ILE CA CB sing N N 371 ILE CA HA sing N N 372 ILE C O doub N N 373 ILE C OXT sing N N 374 ILE CB CG1 sing N N 375 ILE CB CG2 sing N N 376 ILE CB HB sing N N 377 ILE CG1 CD1 sing N N 378 ILE CG1 HG12 sing N N 379 ILE CG1 HG13 sing N N 380 ILE CG2 HG21 sing N N 381 ILE CG2 HG22 sing N N 382 ILE CG2 HG23 sing N N 383 ILE CD1 HD11 sing N N 384 ILE CD1 HD12 sing N N 385 ILE CD1 HD13 sing N N 386 ILE OXT HXT sing N N 387 LEU N CA sing N N 388 LEU N H sing N N 389 LEU N H2 sing N N 390 LEU CA C sing N N 391 LEU CA CB sing N N 392 LEU CA HA sing N N 393 LEU C O doub N N 394 LEU C OXT sing N N 395 LEU CB CG sing N N 396 LEU CB HB2 sing N N 397 LEU CB HB3 sing N N 398 LEU CG CD1 sing N N 399 LEU CG CD2 sing N N 400 LEU CG HG sing N N 401 LEU CD1 HD11 sing N N 402 LEU CD1 HD12 sing N N 403 LEU CD1 HD13 sing N N 404 LEU CD2 HD21 sing N N 405 LEU CD2 HD22 sing N N 406 LEU CD2 HD23 sing N N 407 LEU OXT HXT sing N N 408 LYS N CA sing N N 409 LYS N H sing N N 410 LYS N H2 sing N N 411 LYS CA C sing N N 412 LYS CA CB sing N N 413 LYS CA HA sing N N 414 LYS C O doub N N 415 LYS C OXT sing N N 416 LYS CB CG sing N N 417 LYS CB HB2 sing N N 418 LYS CB HB3 sing N N 419 LYS CG CD sing N N 420 LYS CG HG2 sing N N 421 LYS CG HG3 sing N N 422 LYS CD CE sing N N 423 LYS CD HD2 sing N N 424 LYS CD HD3 sing N N 425 LYS CE NZ sing N N 426 LYS CE HE2 sing N N 427 LYS CE HE3 sing N N 428 LYS NZ HZ1 sing N N 429 LYS NZ HZ2 sing N N 430 LYS NZ HZ3 sing N N 431 LYS OXT HXT sing N N 432 MET N CA sing N N 433 MET N H sing N N 434 MET N H2 sing N N 435 MET CA C sing N N 436 MET CA CB sing N N 437 MET CA HA sing N N 438 MET C O doub N N 439 MET C OXT sing N N 440 MET CB CG sing N N 441 MET CB HB2 sing N N 442 MET CB HB3 sing N N 443 MET CG SD sing N N 444 MET CG HG2 sing N N 445 MET CG HG3 sing N N 446 MET SD CE sing N N 447 MET CE HE1 sing N N 448 MET CE HE2 sing N N 449 MET CE HE3 sing N N 450 MET OXT HXT sing N N 451 NAG C1 C2 sing N N 452 NAG C1 O1 sing N N 453 NAG C1 O5 sing N N 454 NAG C1 H1 sing N N 455 NAG C2 C3 sing N N 456 NAG C2 N2 sing N N 457 NAG C2 H2 sing N N 458 NAG C3 C4 sing N N 459 NAG C3 O3 sing N N 460 NAG C3 H3 sing N N 461 NAG C4 C5 sing N N 462 NAG C4 O4 sing N N 463 NAG C4 H4 sing N N 464 NAG C5 C6 sing N N 465 NAG C5 O5 sing N N 466 NAG C5 H5 sing N N 467 NAG C6 O6 sing N N 468 NAG C6 H61 sing N N 469 NAG C6 H62 sing N N 470 NAG C7 C8 sing N N 471 NAG C7 N2 sing N N 472 NAG C7 O7 doub N N 473 NAG C8 H81 sing N N 474 NAG C8 H82 sing N N 475 NAG C8 H83 sing N N 476 NAG N2 HN2 sing N N 477 NAG O1 HO1 sing N N 478 NAG O3 HO3 sing N N 479 NAG O4 HO4 sing N N 480 NAG O6 HO6 sing N N 481 PHE N CA sing N N 482 PHE N H sing N N 483 PHE N H2 sing N N 484 PHE CA C sing N N 485 PHE CA CB sing N N 486 PHE CA HA sing N N 487 PHE C O doub N N 488 PHE C OXT sing N N 489 PHE CB CG sing N N 490 PHE CB HB2 sing N N 491 PHE CB HB3 sing N N 492 PHE CG CD1 doub Y N 493 PHE CG CD2 sing Y N 494 PHE CD1 CE1 sing Y N 495 PHE CD1 HD1 sing N N 496 PHE CD2 CE2 doub Y N 497 PHE CD2 HD2 sing N N 498 PHE CE1 CZ doub Y N 499 PHE CE1 HE1 sing N N 500 PHE CE2 CZ sing Y N 501 PHE CE2 HE2 sing N N 502 PHE CZ HZ sing N N 503 PHE OXT HXT sing N N 504 PRO N CA sing N N 505 PRO N CD sing N N 506 PRO N H sing N N 507 PRO CA C sing N N 508 PRO CA CB sing N N 509 PRO CA HA sing N N 510 PRO C O doub N N 511 PRO C OXT sing N N 512 PRO CB CG sing N N 513 PRO CB HB2 sing N N 514 PRO CB HB3 sing N N 515 PRO CG CD sing N N 516 PRO CG HG2 sing N N 517 PRO CG HG3 sing N N 518 PRO CD HD2 sing N N 519 PRO CD HD3 sing N N 520 PRO OXT HXT sing N N 521 SER N CA sing N N 522 SER N H sing N N 523 SER N H2 sing N N 524 SER CA C sing N N 525 SER CA CB sing N N 526 SER CA HA sing N N 527 SER C O doub N N 528 SER C OXT sing N N 529 SER CB OG sing N N 530 SER CB HB2 sing N N 531 SER CB HB3 sing N N 532 SER OG HG sing N N 533 SER OXT HXT sing N N 534 THR N CA sing N N 535 THR N H sing N N 536 THR N H2 sing N N 537 THR CA C sing N N 538 THR CA CB sing N N 539 THR CA HA sing N N 540 THR C O doub N N 541 THR C OXT sing N N 542 THR CB OG1 sing N N 543 THR CB CG2 sing N N 544 THR CB HB sing N N 545 THR OG1 HG1 sing N N 546 THR CG2 HG21 sing N N 547 THR CG2 HG22 sing N N 548 THR CG2 HG23 sing N N 549 THR OXT HXT sing N N 550 TRP N CA sing N N 551 TRP N H sing N N 552 TRP N H2 sing N N 553 TRP CA C sing N N 554 TRP CA CB sing N N 555 TRP CA HA sing N N 556 TRP C O doub N N 557 TRP C OXT sing N N 558 TRP CB CG sing N N 559 TRP CB HB2 sing N N 560 TRP CB HB3 sing N N 561 TRP CG CD1 doub Y N 562 TRP CG CD2 sing Y N 563 TRP CD1 NE1 sing Y N 564 TRP CD1 HD1 sing N N 565 TRP CD2 CE2 doub Y N 566 TRP CD2 CE3 sing Y N 567 TRP NE1 CE2 sing Y N 568 TRP NE1 HE1 sing N N 569 TRP CE2 CZ2 sing Y N 570 TRP CE3 CZ3 doub Y N 571 TRP CE3 HE3 sing N N 572 TRP CZ2 CH2 doub Y N 573 TRP CZ2 HZ2 sing N N 574 TRP CZ3 CH2 sing Y N 575 TRP CZ3 HZ3 sing N N 576 TRP CH2 HH2 sing N N 577 TRP OXT HXT sing N N 578 TYR N CA sing N N 579 TYR N H sing N N 580 TYR N H2 sing N N 581 TYR CA C sing N N 582 TYR CA CB sing N N 583 TYR CA HA sing N N 584 TYR C O doub N N 585 TYR C OXT sing N N 586 TYR CB CG sing N N 587 TYR CB HB2 sing N N 588 TYR CB HB3 sing N N 589 TYR CG CD1 doub Y N 590 TYR CG CD2 sing Y N 591 TYR CD1 CE1 sing Y N 592 TYR CD1 HD1 sing N N 593 TYR CD2 CE2 doub Y N 594 TYR CD2 HD2 sing N N 595 TYR CE1 CZ doub Y N 596 TYR CE1 HE1 sing N N 597 TYR CE2 CZ sing Y N 598 TYR CE2 HE2 sing N N 599 TYR CZ OH sing N N 600 TYR OH HH sing N N 601 TYR OXT HXT sing N N 602 VAL N CA sing N N 603 VAL N H sing N N 604 VAL N H2 sing N N 605 VAL CA C sing N N 606 VAL CA CB sing N N 607 VAL CA HA sing N N 608 VAL C O doub N N 609 VAL C OXT sing N N 610 VAL CB CG1 sing N N 611 VAL CB CG2 sing N N 612 VAL CB HB sing N N 613 VAL CG1 HG11 sing N N 614 VAL CG1 HG12 sing N N 615 VAL CG1 HG13 sing N N 616 VAL CG2 HG21 sing N N 617 VAL CG2 HG22 sing N N 618 VAL CG2 HG23 sing N N 619 VAL OXT HXT sing N N 620 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4I7Y 'double helix' 4I7Y 'hairpin loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DG 1 1_555 C DC 27 1_555 -0.190 -0.131 0.243 -7.396 -8.652 0.638 1 D_DG1:DC27_D D 1 ? D 27 ? 19 1 1 C DT 2 1_555 C DA 26 1_555 0.396 -0.215 0.019 -12.564 -7.605 5.025 2 D_DT2:DA26_D D 2 ? D 26 ? 20 1 1 C DC 3 1_555 C DG 25 1_555 0.321 -0.402 0.055 -2.999 -6.597 2.863 3 D_DC3:DG25_D D 3 ? D 25 ? 19 1 1 C DC 4 1_555 C DG 23 1_555 -0.092 0.036 -0.240 10.003 0.719 0.759 4 D_DC4:DG23_D D 4 ? D 23 ? 19 1 1 C DA 10 1_555 C DT 19 1_555 0.054 1.172 -0.337 -15.490 -28.850 171.426 5 D_DA10:DT19_D D 10 ? D 19 ? 21 2 1 C DG 11 1_555 C DG 17 1_555 -1.458 -3.025 0.294 -25.591 -3.004 87.327 6 D_DG11:DG17_D D 11 ? D 17 ? 6 3 1 C DG 5 1_555 C DG 16 1_555 5.261 0.055 -0.171 -11.334 -6.418 -118.899 7 D_DG5:DG16_D D 5 ? D 16 ? 7 4 1 C DT 6 1_555 C DA 15 1_555 3.482 -0.998 -0.150 -9.159 -7.038 -94.804 8 D_DT6:DA15_D D 6 ? D 15 ? 24 4 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DG 1 1_555 C DC 27 1_555 C DT 2 1_555 C DA 26 1_555 -0.369 -1.185 3.393 4.060 2.255 36.784 -2.172 1.135 3.260 3.556 -6.402 37.066 1 DD_DG1DT2:DA26DC27_DD D 1 ? D 27 ? D 2 ? D 26 ? 1 C DT 2 1_555 C DA 26 1_555 C DC 3 1_555 C DG 25 1_555 0.234 -0.632 3.099 1.767 6.131 35.104 -1.862 -0.143 2.958 10.061 -2.899 35.661 2 DD_DT2DC3:DG25DA26_DD D 2 ? D 26 ? D 3 ? D 25 ? 1 C DC 3 1_555 C DG 25 1_555 C DC 4 1_555 C DG 23 1_555 -1.355 -0.755 3.055 2.801 2.660 18.076 -3.638 5.575 2.677 8.343 -8.786 18.481 3 DD_DC3DC4:DG23DG25_DD D 3 ? D 25 ? D 4 ? D 23 ? 1 C DA 10 1_555 C DT 19 1_555 C DG 11 1_555 C DG 17 1_555 0.915 -2.861 -0.427 -159.454 -73.095 53.560 -1.470 -0.375 0.129 -37.073 80.873 175.902 4 DD_DA10DG11:DG17DT19_DD D 10 ? D 19 ? D 11 ? D 17 ? 1 C DG 11 1_555 C DG 17 1_555 C DG 5 1_555 C DG 16 1_555 2.402 2.905 -2.089 -167.982 25.011 172.929 1.462 -1.136 -2.205 12.507 84.001 179.374 5 DD_DG11DG5:DG16DG17_DD D 11 ? D 17 ? D 5 ? D 16 ? 1 C DG 5 1_555 C DG 16 1_555 C DT 6 1_555 C DA 15 1_555 -0.132 0.860 3.114 -7.226 -2.421 19.147 3.411 -2.632 2.843 -6.934 20.693 20.595 6 DD_DG5DT6:DA15DG16_DD D 5 ? D 16 ? D 6 ? D 15 ? # _atom_sites.entry_id 4I7Y _atom_sites.fract_transf_matrix[1][1] 0.020771 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003536 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012209 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018883 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O P S # loop_