HEADER HYDROLASE 05-DEC-12 4I9G TITLE CRYSTAL STRUCTURE OF GLYCEROL PHOSPHATE PHOSPHATASE RV1692 FROM TITLE 2 MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH MAGNESIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCEROL 3-PHOSPHATE PHOSPHATASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: MT1731, RV1692; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HALOACID DEHALOGENAZE SUPERFAMILY, GLYCEROL 3-PHOSPHATE PHOSPHATASE, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR T.BISWAS,G.LARROUY-MAUMUS,L.P.DE CARVALHO,O.V.TSODIKOV REVDAT 3 28-FEB-24 4I9G 1 REMARK SEQADV LINK REVDAT 2 24-JUL-13 4I9G 1 JRNL REVDAT 1 10-JUL-13 4I9G 0 JRNL AUTH G.LARROUY-MAUMUS,T.BISWAS,D.M.HUNT,G.KELLY,O.V.TSODIKOV, JRNL AUTH 2 L.P.DE CARVALHO JRNL TITL DISCOVERY OF A GLYCEROL 3-PHOSPHATE PHOSPHATASE REVEALS JRNL TITL 2 GLYCEROPHOSPHOLIPID POLAR HEAD RECYCLING IN MYCOBACTERIUM JRNL TITL 3 TUBERCULOSIS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 110 11320 2013 JRNL REFN ISSN 0027-8424 JRNL PMID 23801751 JRNL DOI 10.1073/PNAS.1221597110 REMARK 2 REMARK 2 RESOLUTION. 3.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 11153 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.272 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 556 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.25 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.33 REMARK 3 REFLECTION IN BIN (WORKING SET) : 798 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.76 REMARK 3 BIN R VALUE (WORKING SET) : 0.3120 REMARK 3 BIN FREE R VALUE SET COUNT : 36 REMARK 3 BIN FREE R VALUE : 0.3140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4783 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 2 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 103.9 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.41000 REMARK 3 B22 (A**2) : -1.57000 REMARK 3 B33 (A**2) : 1.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 2.87000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.590 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.432 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 26.539 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.934 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.907 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4863 ; 0.004 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4722 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6619 ; 0.933 ; 1.961 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10779 ; 0.714 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 649 ; 5.096 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 196 ;32.472 ;23.163 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 737 ;17.287 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 49 ;14.337 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 783 ; 0.049 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5624 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1069 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4I9G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-DEC-12. REMARK 100 THE DEPOSITION ID IS D_1000076471. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-FEB-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11153 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.250 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS-HCL (100 MM) PH 8.0, PEG 4000 REMARK 280 (15% W/V), AND MGCL2 (100 MM), VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 57.18400 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.59800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 57.18400 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 35.59800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 VAL A 289 REMARK 465 ASP A 290 REMARK 465 ASP A 291 REMARK 465 LEU A 292 REMARK 465 GLU A 293 REMARK 465 PHE A 294 REMARK 465 ARG A 313 REMARK 465 ALA A 314 REMARK 465 ALA A 315 REMARK 465 ASP A 316 REMARK 465 LEU A 317 REMARK 465 HIS A 318 REMARK 465 GLN A 319 REMARK 465 ARG A 342 REMARK 465 SER A 343 REMARK 465 ASP A 344 REMARK 465 HIS A 345 REMARK 465 PRO A 346 REMARK 465 VAL A 347 REMARK 465 THR A 348 REMARK 465 SER A 349 REMARK 465 VAL A 350 REMARK 465 GLY A 351 REMARK 465 THR A 352 REMARK 465 GLN A 353 REMARK 465 MET B -7 REMARK 465 ALA B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 GLY B 287 REMARK 465 ASP B 288 REMARK 465 VAL B 289 REMARK 465 ASP B 290 REMARK 465 ASP B 291 REMARK 465 LEU B 292 REMARK 465 GLU B 293 REMARK 465 PHE B 294 REMARK 465 ILE B 295 REMARK 465 ARG B 313 REMARK 465 ALA B 314 REMARK 465 ALA B 315 REMARK 465 ASP B 316 REMARK 465 LEU B 317 REMARK 465 HIS B 318 REMARK 465 ARG B 342 REMARK 465 SER B 343 REMARK 465 ASP B 344 REMARK 465 HIS B 345 REMARK 465 PRO B 346 REMARK 465 VAL B 347 REMARK 465 THR B 348 REMARK 465 SER B 349 REMARK 465 VAL B 350 REMARK 465 GLY B 351 REMARK 465 THR B 352 REMARK 465 GLN B 353 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 0 CG ND1 CD2 CE1 NE2 REMARK 470 MET A 1 CG SD CE REMARK 470 ASP A 288 CG OD1 OD2 REMARK 470 ARG A 320 CG CD NE CZ NH1 NH2 REMARK 470 MET B 1 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 18 -59.92 -124.79 REMARK 500 GLN A 84 20.06 -144.14 REMARK 500 ALA A 203 66.62 -159.14 REMARK 500 THR A 213 -66.38 -122.32 REMARK 500 SER A 339 -99.42 59.51 REMARK 500 LEU A 340 -18.34 60.50 REMARK 500 LYS B 2 -161.89 75.38 REMARK 500 LEU B 15 -71.58 -78.02 REMARK 500 THR B 18 -56.40 -127.45 REMARK 500 GLN B 84 48.30 -153.06 REMARK 500 ASP B 200 58.16 36.36 REMARK 500 ALA B 203 78.31 -150.05 REMARK 500 THR B 213 -60.18 -131.92 REMARK 500 ASP B 253 -150.39 -151.88 REMARK 500 SER B 339 -112.26 75.62 REMARK 500 LEU B 340 -9.99 61.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 400 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 14 OD2 REMARK 620 2 ASP A 16 O 75.3 REMARK 620 3 ASP A 209 OD2 71.7 79.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 400 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 14 OD2 REMARK 620 2 ASP B 16 O 85.8 REMARK 620 3 ASP B 209 OD2 62.9 90.6 REMARK 620 4 ASP B 209 OD1 106.3 74.5 47.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 400 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4I9F RELATED DB: PDB DBREF 4I9G A 1 353 UNP O33194 O33194_MYCTU 1 353 DBREF 4I9G B 1 353 UNP O33194 O33194_MYCTU 1 353 SEQADV 4I9G MET A -7 UNP O33194 EXPRESSION TAG SEQADV 4I9G ALA A -6 UNP O33194 EXPRESSION TAG SEQADV 4I9G HIS A -5 UNP O33194 EXPRESSION TAG SEQADV 4I9G HIS A -4 UNP O33194 EXPRESSION TAG SEQADV 4I9G HIS A -3 UNP O33194 EXPRESSION TAG SEQADV 4I9G HIS A -2 UNP O33194 EXPRESSION TAG SEQADV 4I9G HIS A -1 UNP O33194 EXPRESSION TAG SEQADV 4I9G HIS A 0 UNP O33194 EXPRESSION TAG SEQADV 4I9G MET B -7 UNP O33194 EXPRESSION TAG SEQADV 4I9G ALA B -6 UNP O33194 EXPRESSION TAG SEQADV 4I9G HIS B -5 UNP O33194 EXPRESSION TAG SEQADV 4I9G HIS B -4 UNP O33194 EXPRESSION TAG SEQADV 4I9G HIS B -3 UNP O33194 EXPRESSION TAG SEQADV 4I9G HIS B -2 UNP O33194 EXPRESSION TAG SEQADV 4I9G HIS B -1 UNP O33194 EXPRESSION TAG SEQADV 4I9G HIS B 0 UNP O33194 EXPRESSION TAG SEQRES 1 A 361 MET ALA HIS HIS HIS HIS HIS HIS MET LYS SER ILE ALA SEQRES 2 A 361 GLN GLU HIS ASP CYS LEU LEU ILE ASP LEU ASP GLY THR SEQRES 3 A 361 VAL PHE CYS GLY ARG GLN PRO THR GLY GLY ALA VAL GLN SEQRES 4 A 361 SER LEU SER GLN VAL ARG SER ARG LYS LEU PHE VAL THR SEQRES 5 A 361 ASN ASN ALA SER ARG SER ALA ASP GLU VAL ALA ALA HIS SEQRES 6 A 361 LEU CYS GLU LEU GLY PHE THR ALA THR GLY GLU ASP VAL SEQRES 7 A 361 VAL THR SER ALA GLN SER ALA ALA HIS LEU LEU ALA GLY SEQRES 8 A 361 GLN LEU ALA PRO GLY ALA ARG VAL LEU ILE VAL GLY THR SEQRES 9 A 361 GLU ALA LEU ALA ASN GLU VAL ALA ALA VAL GLY LEU ARG SEQRES 10 A 361 PRO VAL ARG ARG PHE GLU ASP ARG PRO ASP ALA VAL VAL SEQRES 11 A 361 GLN GLY LEU SER MET THR THR GLY TRP SER ASP LEU ALA SEQRES 12 A 361 GLU ALA ALA LEU ALA ILE ARG ALA GLY ALA LEU TRP VAL SEQRES 13 A 361 ALA ALA ASN VAL ASP PRO THR LEU PRO THR GLU ARG GLY SEQRES 14 A 361 LEU LEU PRO GLY ASN GLY SER MET VAL ALA ALA LEU ARG SEQRES 15 A 361 THR ALA THR GLY MET ASP PRO ARG VAL ALA GLY LYS PRO SEQRES 16 A 361 ALA PRO ALA LEU MET THR GLU ALA VAL ALA ARG GLY ASP SEQRES 17 A 361 PHE ARG ALA ALA LEU VAL VAL GLY ASP ARG LEU ASP THR SEQRES 18 A 361 ASP ILE GLU GLY ALA ASN ALA ALA GLY LEU PRO SER LEU SEQRES 19 A 361 MET VAL LEU THR GLY VAL ASN SER ALA TRP ASP ALA VAL SEQRES 20 A 361 TYR ALA GLU PRO VAL ARG ARG PRO THR TYR ILE GLY HIS SEQRES 21 A 361 ASP LEU ARG SER LEU HIS GLN ASP SER LYS LEU LEU ALA SEQRES 22 A 361 VAL ALA PRO GLN PRO GLY TRP GLN ILE ASP VAL GLY GLY SEQRES 23 A 361 GLY ALA VAL THR VAL CYS ALA ASN GLY ASP VAL ASP ASP SEQRES 24 A 361 LEU GLU PHE ILE ASP ASP GLY LEU SER ILE VAL ARG ALA SEQRES 25 A 361 VAL ALA SER ALA VAL TRP GLU ALA ARG ALA ALA ASP LEU SEQRES 26 A 361 HIS GLN ARG PRO LEU ARG ILE GLU ALA GLY ASP GLU ARG SEQRES 27 A 361 ALA ARG ALA ALA LEU GLN ARG TRP SER LEU MET ARG SER SEQRES 28 A 361 ASP HIS PRO VAL THR SER VAL GLY THR GLN SEQRES 1 B 361 MET ALA HIS HIS HIS HIS HIS HIS MET LYS SER ILE ALA SEQRES 2 B 361 GLN GLU HIS ASP CYS LEU LEU ILE ASP LEU ASP GLY THR SEQRES 3 B 361 VAL PHE CYS GLY ARG GLN PRO THR GLY GLY ALA VAL GLN SEQRES 4 B 361 SER LEU SER GLN VAL ARG SER ARG LYS LEU PHE VAL THR SEQRES 5 B 361 ASN ASN ALA SER ARG SER ALA ASP GLU VAL ALA ALA HIS SEQRES 6 B 361 LEU CYS GLU LEU GLY PHE THR ALA THR GLY GLU ASP VAL SEQRES 7 B 361 VAL THR SER ALA GLN SER ALA ALA HIS LEU LEU ALA GLY SEQRES 8 B 361 GLN LEU ALA PRO GLY ALA ARG VAL LEU ILE VAL GLY THR SEQRES 9 B 361 GLU ALA LEU ALA ASN GLU VAL ALA ALA VAL GLY LEU ARG SEQRES 10 B 361 PRO VAL ARG ARG PHE GLU ASP ARG PRO ASP ALA VAL VAL SEQRES 11 B 361 GLN GLY LEU SER MET THR THR GLY TRP SER ASP LEU ALA SEQRES 12 B 361 GLU ALA ALA LEU ALA ILE ARG ALA GLY ALA LEU TRP VAL SEQRES 13 B 361 ALA ALA ASN VAL ASP PRO THR LEU PRO THR GLU ARG GLY SEQRES 14 B 361 LEU LEU PRO GLY ASN GLY SER MET VAL ALA ALA LEU ARG SEQRES 15 B 361 THR ALA THR GLY MET ASP PRO ARG VAL ALA GLY LYS PRO SEQRES 16 B 361 ALA PRO ALA LEU MET THR GLU ALA VAL ALA ARG GLY ASP SEQRES 17 B 361 PHE ARG ALA ALA LEU VAL VAL GLY ASP ARG LEU ASP THR SEQRES 18 B 361 ASP ILE GLU GLY ALA ASN ALA ALA GLY LEU PRO SER LEU SEQRES 19 B 361 MET VAL LEU THR GLY VAL ASN SER ALA TRP ASP ALA VAL SEQRES 20 B 361 TYR ALA GLU PRO VAL ARG ARG PRO THR TYR ILE GLY HIS SEQRES 21 B 361 ASP LEU ARG SER LEU HIS GLN ASP SER LYS LEU LEU ALA SEQRES 22 B 361 VAL ALA PRO GLN PRO GLY TRP GLN ILE ASP VAL GLY GLY SEQRES 23 B 361 GLY ALA VAL THR VAL CYS ALA ASN GLY ASP VAL ASP ASP SEQRES 24 B 361 LEU GLU PHE ILE ASP ASP GLY LEU SER ILE VAL ARG ALA SEQRES 25 B 361 VAL ALA SER ALA VAL TRP GLU ALA ARG ALA ALA ASP LEU SEQRES 26 B 361 HIS GLN ARG PRO LEU ARG ILE GLU ALA GLY ASP GLU ARG SEQRES 27 B 361 ALA ARG ALA ALA LEU GLN ARG TRP SER LEU MET ARG SER SEQRES 28 B 361 ASP HIS PRO VAL THR SER VAL GLY THR GLN HET MG A 400 1 HET MG B 400 1 HETNAM MG MAGNESIUM ION FORMUL 3 MG 2(MG 2+) FORMUL 5 HOH *2(H2 O) HELIX 1 1 GLY A 28 GLN A 35 1 8 HELIX 2 2 SER A 50 GLY A 62 1 13 HELIX 3 3 THR A 66 GLU A 68 5 3 HELIX 4 4 SER A 73 GLY A 83 1 11 HELIX 5 5 THR A 96 ALA A 105 1 10 HELIX 6 6 GLY A 130 ALA A 143 1 14 HELIX 7 7 GLY A 165 GLY A 178 1 14 HELIX 8 8 PRO A 189 ASP A 200 1 12 HELIX 9 9 THR A 213 ALA A 221 1 9 HELIX 10 10 SER A 234 TYR A 240 1 7 HELIX 11 11 GLU A 242 ARG A 246 5 5 HELIX 12 12 ASP A 253 GLN A 259 5 7 HELIX 13 13 ASP A 260 ALA A 265 1 6 HELIX 14 14 LEU A 299 ALA A 312 1 14 HELIX 15 15 ASP A 328 TRP A 338 1 11 HELIX 16 16 GLY B 28 GLN B 35 1 8 HELIX 17 17 SER B 50 LEU B 61 1 12 HELIX 18 18 THR B 66 GLU B 68 5 3 HELIX 19 19 SER B 73 GLY B 83 1 11 HELIX 20 20 THR B 96 VAL B 106 1 11 HELIX 21 21 GLY B 130 ALA B 143 1 14 HELIX 22 22 GLY B 165 GLY B 178 1 14 HELIX 23 23 PRO B 189 GLY B 199 1 11 HELIX 24 24 THR B 213 ALA B 221 1 9 HELIX 25 25 SER B 234 TYR B 240 1 7 HELIX 26 26 GLU B 242 ARG B 246 5 5 HELIX 27 27 ASP B 253 GLN B 259 5 7 HELIX 28 28 ASP B 260 ALA B 265 1 6 HELIX 29 29 LEU B 299 ALA B 312 1 14 HELIX 30 30 ASP B 328 TRP B 338 1 11 SHEET 1 A 6 VAL A 70 THR A 72 0 SHEET 2 A 6 ARG A 39 THR A 44 1 N PHE A 42 O VAL A 71 SHEET 3 A 6 CYS A 10 ASP A 14 1 N LEU A 11 O ARG A 39 SHEET 4 A 6 ALA A 204 GLY A 208 1 O LEU A 205 N LEU A 12 SHEET 5 A 6 SER A 225 VAL A 228 1 O LEU A 226 N VAL A 206 SHEET 6 A 6 TYR A 249 GLY A 251 1 O TYR A 249 N SER A 225 SHEET 1 B 2 PHE A 20 CYS A 21 0 SHEET 2 B 2 GLN A 24 PRO A 25 -1 O GLN A 24 N CYS A 21 SHEET 1 C 5 ARG A 109 VAL A 111 0 SHEET 2 C 5 ARG A 90 VAL A 94 1 N ILE A 93 O VAL A 111 SHEET 3 C 5 ALA A 120 GLN A 123 1 O ALA A 120 N LEU A 92 SHEET 4 C 5 LEU A 146 ALA A 149 1 O LEU A 146 N VAL A 121 SHEET 5 C 5 ARG A 182 VAL A 183 1 O ARG A 182 N TRP A 147 SHEET 1 D 2 THR A 155 THR A 158 0 SHEET 2 D 2 GLY A 161 PRO A 164 -1 O LEU A 163 N LEU A 156 SHEET 1 E 3 TRP A 272 VAL A 276 0 SHEET 2 E 3 ALA A 280 ALA A 285 -1 O THR A 282 N ASP A 275 SHEET 3 E 3 ARG A 323 ALA A 326 1 O ARG A 323 N VAL A 281 SHEET 1 F 6 VAL B 70 THR B 72 0 SHEET 2 F 6 ARG B 39 THR B 44 1 N PHE B 42 O VAL B 71 SHEET 3 F 6 CYS B 10 ASP B 14 1 N ILE B 13 O VAL B 43 SHEET 4 F 6 LEU B 205 GLY B 208 1 O LEU B 205 N LEU B 12 SHEET 5 F 6 SER B 225 VAL B 228 1 O LEU B 226 N VAL B 206 SHEET 6 F 6 TYR B 249 GLY B 251 1 O TYR B 249 N SER B 225 SHEET 1 G 2 PHE B 20 CYS B 21 0 SHEET 2 G 2 GLN B 24 PRO B 25 -1 O GLN B 24 N CYS B 21 SHEET 1 H 5 ARG B 109 VAL B 111 0 SHEET 2 H 5 ARG B 90 VAL B 94 1 N VAL B 91 O VAL B 111 SHEET 3 H 5 ALA B 120 GLN B 123 1 O ALA B 120 N LEU B 92 SHEET 4 H 5 LEU B 146 ALA B 149 1 O LEU B 146 N VAL B 121 SHEET 5 H 5 ARG B 182 VAL B 183 1 O ARG B 182 N TRP B 147 SHEET 1 I 2 THR B 155 PRO B 157 0 SHEET 2 I 2 LEU B 162 PRO B 164 -1 O LEU B 163 N LEU B 156 SHEET 1 J 3 TRP B 272 VAL B 276 0 SHEET 2 J 3 ALA B 280 ALA B 285 -1 O CYS B 284 N GLN B 273 SHEET 3 J 3 ARG B 323 ALA B 326 1 O ARG B 323 N VAL B 281 LINK OD2 ASP A 14 MG MG A 400 1555 1555 2.18 LINK O ASP A 16 MG MG A 400 1555 1555 2.18 LINK OD2 ASP A 209 MG MG A 400 1555 1555 2.18 LINK OD2 ASP B 14 MG MG B 400 1555 1555 2.18 LINK O ASP B 16 MG MG B 400 1555 1555 2.18 LINK OD2 ASP B 209 MG MG B 400 1555 1555 2.18 LINK OD1 ASP B 209 MG MG B 400 1555 1555 2.95 CISPEP 1 LYS A 186 PRO A 187 0 5.69 CISPEP 2 LYS B 186 PRO B 187 0 9.05 SITE 1 AC1 3 ASP A 14 ASP A 16 ASP A 209 SITE 1 AC2 3 ASP B 14 ASP B 16 ASP B 209 CRYST1 114.368 71.196 94.621 90.00 105.52 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008744 0.000000 0.002428 0.00000 SCALE2 0.000000 0.014046 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010968 0.00000