HEADER DNA BINDING PROTEIN 09-DEC-12 4IBT TITLE HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R273H AND SECOND-SITE TITLE 2 SUPPRESSOR MUTATION T284R COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELLULAR TUMOR ANTIGEN P53; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: DNA BINDING DOMAIN; COMPND 5 SYNONYM: ANTIGEN NY-CO-13, PHOSPHOPROTEIN P53, TUMOR SUPPRESSOR P53; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: P53, TP53; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-27-B KEYWDS METAL-BINDING, LOOP-SHEET-HELIX MOTIF, TRANSCRIPTION, ACTIVATOR, KEYWDS 2 ANTI-ONCOGENE, APOPTOSIS, CELL CYCLE, DISEASE MUTATION, RESCUE KEYWDS 3 MUTATION, TUMOR SUPPRESSOR, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.DISKIN-POSNER,A.ELDAR,H.ROZENBERG,Z.SHAKKED REVDAT 4 20-SEP-23 4IBT 1 REMARK SEQADV LINK REVDAT 3 15-NOV-17 4IBT 1 REMARK REVDAT 2 23-OCT-13 4IBT 1 JRNL REVDAT 1 14-AUG-13 4IBT 0 JRNL AUTH A.ELDAR,H.ROZENBERG,Y.DISKIN-POSNER,R.ROHS,Z.SHAKKED JRNL TITL STRUCTURAL STUDIES OF P53 INACTIVATION BY DNA-CONTACT JRNL TITL 2 MUTATIONS AND ITS RESCUE BY SUPPRESSOR MUTATIONS VIA JRNL TITL 3 ALTERNATIVE PROTEIN-DNA INTERACTIONS. JRNL REF NUCLEIC ACIDS RES. V. 41 8748 2013 JRNL REFN ISSN 0305-1048 JRNL PMID 23863845 JRNL DOI 10.1093/NAR/GKT630 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1186 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.88 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.5 REMARK 3 NUMBER OF REFLECTIONS : 82662 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.183 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.140 REMARK 3 FREE R VALUE TEST SET COUNT : 2599 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.3971 - 4.4505 0.96 4830 155 0.1407 0.1668 REMARK 3 2 4.4505 - 3.5339 0.95 4699 149 0.1315 0.1316 REMARK 3 3 3.5339 - 3.0876 0.94 4625 143 0.1541 0.1454 REMARK 3 4 3.0876 - 2.8054 0.94 4609 135 0.1649 0.1742 REMARK 3 5 2.8054 - 2.6044 0.93 4566 142 0.1704 0.2071 REMARK 3 6 2.6044 - 2.4509 0.92 4565 150 0.1738 0.1977 REMARK 3 7 2.4509 - 2.3282 0.92 4463 143 0.1776 0.1967 REMARK 3 8 2.3282 - 2.2269 0.92 4500 134 0.1770 0.1816 REMARK 3 9 2.2269 - 2.1412 0.91 4430 138 0.1836 0.1983 REMARK 3 10 2.1412 - 2.0673 0.90 4426 149 0.1873 0.1957 REMARK 3 11 2.0673 - 2.0027 0.90 4382 132 0.1884 0.2161 REMARK 3 12 2.0027 - 1.9455 0.89 4372 135 0.1869 0.1868 REMARK 3 13 1.9455 - 1.8943 0.89 4320 134 0.1894 0.2124 REMARK 3 14 1.8943 - 1.8480 0.89 4328 128 0.2119 0.2132 REMARK 3 15 1.8480 - 1.8060 0.88 4334 131 0.2181 0.2875 REMARK 3 16 1.8060 - 1.7676 0.88 4276 127 0.2294 0.2266 REMARK 3 17 1.7676 - 1.7322 0.87 4260 137 0.2529 0.2512 REMARK 3 18 1.7322 - 1.7000 0.86 4157 125 0.2812 0.3440 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.970 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.1500 REMARK 3 OPERATOR: H,-K,-L REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 6672 REMARK 3 ANGLE : 0.864 9117 REMARK 3 CHIRALITY : 0.059 991 REMARK 3 PLANARITY : 0.003 1225 REMARK 3 DIHEDRAL : 13.074 2600 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 31 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 95:109 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.3968 8.1072 23.1592 REMARK 3 T TENSOR REMARK 3 T11: 0.1995 T22: 0.1554 REMARK 3 T33: 0.1778 T12: 0.0264 REMARK 3 T13: -0.0283 T23: -0.0142 REMARK 3 L TENSOR REMARK 3 L11: 2.7357 L22: 2.4808 REMARK 3 L33: 3.3407 L12: 0.3930 REMARK 3 L13: -0.0631 L23: -0.9421 REMARK 3 S TENSOR REMARK 3 S11: -0.1010 S12: -0.2627 S13: 0.0731 REMARK 3 S21: 0.0794 S22: 0.1338 S23: 0.1201 REMARK 3 S31: -0.5611 S32: -0.0021 S33: -0.0666 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 110:180 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.1743 2.8964 8.6081 REMARK 3 T TENSOR REMARK 3 T11: 0.1071 T22: 0.1149 REMARK 3 T33: 0.1451 T12: 0.0030 REMARK 3 T13: 0.0018 T23: -0.0066 REMARK 3 L TENSOR REMARK 3 L11: 1.5978 L22: 0.5687 REMARK 3 L33: 1.4325 L12: -0.3102 REMARK 3 L13: -0.3315 L23: 0.2585 REMARK 3 S TENSOR REMARK 3 S11: 0.0131 S12: 0.0563 S13: -0.0384 REMARK 3 S21: -0.0434 S22: -0.0082 S23: -0.0016 REMARK 3 S31: -0.1330 S32: -0.0118 S33: -0.0158 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 181:250 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.7956 -0.3419 7.7718 REMARK 3 T TENSOR REMARK 3 T11: 0.0984 T22: 0.1379 REMARK 3 T33: 0.1466 T12: -0.0066 REMARK 3 T13: 0.0050 T23: -0.0364 REMARK 3 L TENSOR REMARK 3 L11: 1.8428 L22: 1.3338 REMARK 3 L33: 1.6116 L12: 0.1341 REMARK 3 L13: -0.6312 L23: -0.0212 REMARK 3 S TENSOR REMARK 3 S11: -0.0965 S12: 0.1916 S13: -0.1401 REMARK 3 S21: -0.1081 S22: -0.0248 S23: 0.0374 REMARK 3 S31: 0.0437 S32: -0.2490 S33: 0.0893 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESID 251:290 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.1744 5.6299 10.1747 REMARK 3 T TENSOR REMARK 3 T11: 0.1299 T22: 0.1060 REMARK 3 T33: 0.1592 T12: -0.0048 REMARK 3 T13: 0.0157 T23: 0.0087 REMARK 3 L TENSOR REMARK 3 L11: 1.4856 L22: 0.1981 REMARK 3 L33: 2.3097 L12: -0.4149 REMARK 3 L13: -0.4463 L23: 0.2041 REMARK 3 S TENSOR REMARK 3 S11: 0.0723 S12: 0.0634 S13: 0.1230 REMARK 3 S21: -0.0094 S22: -0.0375 S23: -0.0662 REMARK 3 S31: -0.2516 S32: 0.0770 S33: -0.0592 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN B AND (RESID 95:109 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.7794 11.3419 61.7866 REMARK 3 T TENSOR REMARK 3 T11: 0.1857 T22: 0.1607 REMARK 3 T33: 0.2368 T12: 0.0166 REMARK 3 T13: -0.0050 T23: -0.0517 REMARK 3 L TENSOR REMARK 3 L11: 0.9765 L22: 1.5124 REMARK 3 L33: 3.4341 L12: 0.3114 REMARK 3 L13: 0.5004 L23: -1.0902 REMARK 3 S TENSOR REMARK 3 S11: -0.0220 S12: -0.1845 S13: 0.2978 REMARK 3 S21: 0.0304 S22: 0.0627 S23: 0.1388 REMARK 3 S31: -0.3602 S32: -0.0208 S33: -0.0479 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN B AND (RESID 110:140 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.7716 -1.6044 46.8725 REMARK 3 T TENSOR REMARK 3 T11: 0.1061 T22: 0.1360 REMARK 3 T33: 0.1651 T12: -0.0103 REMARK 3 T13: 0.0116 T23: 0.0059 REMARK 3 L TENSOR REMARK 3 L11: 1.1365 L22: 0.3292 REMARK 3 L33: 0.2798 L12: -0.2565 REMARK 3 L13: -0.1960 L23: -0.1962 REMARK 3 S TENSOR REMARK 3 S11: 0.0017 S12: 0.0735 S13: 0.0085 REMARK 3 S21: 0.0180 S22: -0.0150 S23: -0.0047 REMARK 3 S31: -0.0051 S32: -0.0314 S33: 0.0027 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN B AND (RESID 141:155 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.9984 -2.5945 63.6723 REMARK 3 T TENSOR REMARK 3 T11: 0.1076 T22: 0.1657 REMARK 3 T33: 0.1604 T12: 0.0063 REMARK 3 T13: -0.0190 T23: 0.0253 REMARK 3 L TENSOR REMARK 3 L11: 1.9179 L22: 0.6691 REMARK 3 L33: 0.6714 L12: -0.0724 REMARK 3 L13: 0.5908 L23: 0.2617 REMARK 3 S TENSOR REMARK 3 S11: 0.0111 S12: -0.3145 S13: -0.1270 REMARK 3 S21: 0.0502 S22: 0.0343 S23: -0.0492 REMARK 3 S31: 0.1097 S32: -0.0087 S33: -0.0622 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN B AND (RESID 156:194) REMARK 3 ORIGIN FOR THE GROUP (A): 23.5076 4.4851 44.0209 REMARK 3 T TENSOR REMARK 3 T11: 0.0952 T22: 0.1911 REMARK 3 T33: 0.1532 T12: 0.0088 REMARK 3 T13: 0.0039 T23: 0.0408 REMARK 3 L TENSOR REMARK 3 L11: 1.8051 L22: 0.5696 REMARK 3 L33: 1.6343 L12: -0.4442 REMARK 3 L13: -0.7108 L23: -0.0258 REMARK 3 S TENSOR REMARK 3 S11: 0.0621 S12: 0.4282 S13: 0.2186 REMARK 3 S21: -0.1126 S22: -0.0603 S23: 0.0145 REMARK 3 S31: -0.0325 S32: -0.3099 S33: -0.0402 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN B AND (RESID 195:203 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.5232 -7.3037 53.2599 REMARK 3 T TENSOR REMARK 3 T11: 0.1069 T22: 0.1213 REMARK 3 T33: 0.1675 T12: -0.0127 REMARK 3 T13: 0.0082 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 1.4912 L22: 1.4962 REMARK 3 L33: 2.7243 L12: 0.1320 REMARK 3 L13: -0.5007 L23: -0.9530 REMARK 3 S TENSOR REMARK 3 S11: -0.1751 S12: 0.0676 S13: -0.2238 REMARK 3 S21: 0.0290 S22: 0.0551 S23: -0.1601 REMARK 3 S31: 0.3044 S32: -0.1127 S33: 0.1254 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN B AND (RESID 204:213 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.7325 8.0543 53.4423 REMARK 3 T TENSOR REMARK 3 T11: 0.1241 T22: 0.1421 REMARK 3 T33: 0.1972 T12: 0.0162 REMARK 3 T13: 0.0251 T23: -0.0016 REMARK 3 L TENSOR REMARK 3 L11: 1.0686 L22: 3.3176 REMARK 3 L33: 1.0437 L12: 0.3390 REMARK 3 L13: 0.1244 L23: -0.8758 REMARK 3 S TENSOR REMARK 3 S11: 0.0528 S12: 0.0419 S13: 0.3032 REMARK 3 S21: 0.1051 S22: -0.0335 S23: 0.1104 REMARK 3 S31: -0.1279 S32: -0.1253 S33: -0.0161 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN B AND (RESID 214:229 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.6706 -6.0085 61.6817 REMARK 3 T TENSOR REMARK 3 T11: 0.1199 T22: 0.1083 REMARK 3 T33: 0.1764 T12: 0.0071 REMARK 3 T13: 0.0092 T23: 0.0333 REMARK 3 L TENSOR REMARK 3 L11: 2.0109 L22: 1.1451 REMARK 3 L33: 1.4755 L12: 0.0274 REMARK 3 L13: 0.3184 L23: -0.6401 REMARK 3 S TENSOR REMARK 3 S11: -0.0243 S12: -0.1893 S13: -0.3244 REMARK 3 S21: -0.0650 S22: -0.0771 S23: -0.1241 REMARK 3 S31: 0.2120 S32: 0.0742 S33: 0.0358 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN B AND (RESID 230:250 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.4773 2.5872 42.0906 REMARK 3 T TENSOR REMARK 3 T11: 0.1140 T22: 0.1701 REMARK 3 T33: 0.1599 T12: -0.0096 REMARK 3 T13: 0.0171 T23: 0.0333 REMARK 3 L TENSOR REMARK 3 L11: 1.2115 L22: 0.4813 REMARK 3 L33: 0.9965 L12: -0.1192 REMARK 3 L13: -0.0540 L23: 0.6908 REMARK 3 S TENSOR REMARK 3 S11: -0.0130 S12: 0.2899 S13: 0.0595 REMARK 3 S21: -0.1040 S22: -0.0155 S23: -0.0384 REMARK 3 S31: -0.1153 S32: -0.0904 S33: 0.0605 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN B AND (RESID 251:277 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.9388 5.4363 54.7768 REMARK 3 T TENSOR REMARK 3 T11: 0.1015 T22: 0.0954 REMARK 3 T33: 0.1786 T12: 0.0056 REMARK 3 T13: -0.0150 T23: -0.0060 REMARK 3 L TENSOR REMARK 3 L11: 0.9060 L22: 0.6644 REMARK 3 L33: 1.6408 L12: 0.0320 REMARK 3 L13: -0.2198 L23: 0.3322 REMARK 3 S TENSOR REMARK 3 S11: 0.0694 S12: -0.0202 S13: 0.2009 REMARK 3 S21: -0.0420 S22: -0.0151 S23: -0.0619 REMARK 3 S31: -0.2824 S32: 0.0130 S33: -0.0166 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN B AND (RESID 278:289 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.2794 3.5891 39.0302 REMARK 3 T TENSOR REMARK 3 T11: 0.1137 T22: 0.2225 REMARK 3 T33: 0.1825 T12: -0.0152 REMARK 3 T13: 0.0019 T23: 0.0750 REMARK 3 L TENSOR REMARK 3 L11: 4.5638 L22: 4.5632 REMARK 3 L33: 4.4972 L12: -0.1790 REMARK 3 L13: -1.4634 L23: -1.2361 REMARK 3 S TENSOR REMARK 3 S11: -0.0644 S12: 0.5987 S13: 0.4458 REMARK 3 S21: -0.1248 S22: 0.0559 S23: -0.0625 REMARK 3 S31: -0.4945 S32: 0.2240 S33: 0.0827 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN C AND (RESID 94:112 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.3875 -10.5017 -3.4429 REMARK 3 T TENSOR REMARK 3 T11: 0.1233 T22: 0.4997 REMARK 3 T33: 0.1864 T12: 0.0442 REMARK 3 T13: 0.0377 T23: 0.0136 REMARK 3 L TENSOR REMARK 3 L11: 0.2416 L22: 0.2243 REMARK 3 L33: 1.7727 L12: -0.1612 REMARK 3 L13: 0.0121 L23: -0.4595 REMARK 3 S TENSOR REMARK 3 S11: 0.0066 S12: 0.2234 S13: -0.0818 REMARK 3 S21: -0.0928 S22: 0.0261 S23: -0.0280 REMARK 3 S31: 0.1813 S32: 0.3543 S33: 0.1468 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN C AND (RESID 113:123 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.6830 0.1834 17.3268 REMARK 3 T TENSOR REMARK 3 T11: 0.1122 T22: 0.3849 REMARK 3 T33: 0.2068 T12: 0.0025 REMARK 3 T13: 0.0183 T23: -0.0085 REMARK 3 L TENSOR REMARK 3 L11: 0.2093 L22: 0.2605 REMARK 3 L33: 0.9259 L12: -0.1276 REMARK 3 L13: 0.3851 L23: -0.4209 REMARK 3 S TENSOR REMARK 3 S11: -0.0054 S12: -0.0267 S13: 0.0240 REMARK 3 S21: 0.0550 S22: 0.1058 S23: 0.2270 REMARK 3 S31: -0.0781 S32: -0.2631 S33: -0.0017 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN C AND (RESID 124:140 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.8504 -5.6759 14.5512 REMARK 3 T TENSOR REMARK 3 T11: 0.1344 T22: 0.3168 REMARK 3 T33: 0.1794 T12: -0.0247 REMARK 3 T13: -0.0088 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 1.8469 L22: 1.2640 REMARK 3 L33: 0.4602 L12: -0.6031 REMARK 3 L13: -0.2605 L23: 0.1502 REMARK 3 S TENSOR REMARK 3 S11: -0.1088 S12: 0.1610 S13: -0.0101 REMARK 3 S21: 0.1732 S22: 0.0382 S23: -0.1586 REMARK 3 S31: -0.0102 S32: -0.2134 S33: -0.0240 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN C AND (RESID 141:180 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.5422 -8.5277 7.8509 REMARK 3 T TENSOR REMARK 3 T11: 0.0548 T22: 0.2894 REMARK 3 T33: 0.1588 T12: -0.0192 REMARK 3 T13: 0.0159 T23: 0.0164 REMARK 3 L TENSOR REMARK 3 L11: 1.1268 L22: 0.8236 REMARK 3 L33: 0.7862 L12: 0.1237 REMARK 3 L13: -0.0023 L23: -0.0477 REMARK 3 S TENSOR REMARK 3 S11: 0.0149 S12: 0.1350 S13: -0.0543 REMARK 3 S21: 0.0150 S22: -0.0100 S23: -0.0479 REMARK 3 S31: 0.0431 S32: 0.1432 S33: -0.0222 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN C AND (RESID 181:194 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.6131 -3.4556 19.6733 REMARK 3 T TENSOR REMARK 3 T11: 0.2420 T22: 0.3633 REMARK 3 T33: 0.2226 T12: -0.0066 REMARK 3 T13: 0.0496 T23: -0.0505 REMARK 3 L TENSOR REMARK 3 L11: 0.8468 L22: 0.5952 REMARK 3 L33: 1.3037 L12: -0.0808 REMARK 3 L13: -0.7245 L23: -0.4496 REMARK 3 S TENSOR REMARK 3 S11: 0.0657 S12: -0.5962 S13: 0.1461 REMARK 3 S21: 0.6204 S22: -0.0131 S23: 0.3522 REMARK 3 S31: -0.2160 S32: -0.1401 S33: -0.0453 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN C AND (RESID 195:213 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.7052 -4.5794 8.2503 REMARK 3 T TENSOR REMARK 3 T11: 0.0839 T22: 0.1901 REMARK 3 T33: 0.1621 T12: 0.0056 REMARK 3 T13: 0.0043 T23: -0.0224 REMARK 3 L TENSOR REMARK 3 L11: 1.4128 L22: 2.1922 REMARK 3 L33: 1.1244 L12: -0.0254 REMARK 3 L13: 0.1371 L23: -0.3130 REMARK 3 S TENSOR REMARK 3 S11: 0.0715 S12: -0.0258 S13: 0.1522 REMARK 3 S21: -0.1058 S22: -0.1665 S23: 0.1275 REMARK 3 S31: -0.0073 S32: 0.0577 S33: 0.0826 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN C AND (RESID 214:229 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.0386 6.5295 1.5361 REMARK 3 T TENSOR REMARK 3 T11: 0.1094 T22: 0.4069 REMARK 3 T33: 0.3060 T12: -0.1122 REMARK 3 T13: -0.0215 T23: 0.1082 REMARK 3 L TENSOR REMARK 3 L11: 0.2958 L22: 0.9554 REMARK 3 L33: 0.2251 L12: 0.2485 REMARK 3 L13: -0.0229 L23: 0.3087 REMARK 3 S TENSOR REMARK 3 S11: 0.0151 S12: 0.0862 S13: 0.3653 REMARK 3 S21: 0.0895 S22: -0.1024 S23: -0.0842 REMARK 3 S31: -0.2288 S32: 0.4161 S33: 0.0209 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN C AND (RESID 230:250 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.4610 -9.5998 17.8073 REMARK 3 T TENSOR REMARK 3 T11: 0.1135 T22: 0.3230 REMARK 3 T33: 0.1672 T12: -0.0366 REMARK 3 T13: 0.0012 T23: 0.0514 REMARK 3 L TENSOR REMARK 3 L11: 1.2466 L22: 1.2587 REMARK 3 L33: 0.9925 L12: 0.3609 REMARK 3 L13: -0.0125 L23: 0.0244 REMARK 3 S TENSOR REMARK 3 S11: 0.0678 S12: -0.2186 S13: -0.1339 REMARK 3 S21: 0.2099 S22: -0.1262 S23: -0.0166 REMARK 3 S31: 0.0336 S32: 0.0174 S33: 0.0470 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN C AND (RESID 251:274 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.9719 -7.9062 2.1128 REMARK 3 T TENSOR REMARK 3 T11: 0.1039 T22: 0.3407 REMARK 3 T33: 0.1485 T12: 0.0072 REMARK 3 T13: 0.0196 T23: 0.0161 REMARK 3 L TENSOR REMARK 3 L11: 0.6698 L22: 0.5009 REMARK 3 L33: 0.6767 L12: -0.0457 REMARK 3 L13: 0.3728 L23: -0.3695 REMARK 3 S TENSOR REMARK 3 S11: 0.0718 S12: 0.1587 S13: 0.0271 REMARK 3 S21: -0.0819 S22: -0.1224 S23: -0.0886 REMARK 3 S31: 0.0778 S32: 0.0878 S33: 0.0390 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN C AND (RESID 275:290 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.0042 -10.9918 19.4676 REMARK 3 T TENSOR REMARK 3 T11: 0.1480 T22: 0.2864 REMARK 3 T33: 0.3944 T12: -0.0348 REMARK 3 T13: 0.0057 T23: 0.0567 REMARK 3 L TENSOR REMARK 3 L11: 2.4332 L22: 1.4886 REMARK 3 L33: 1.7986 L12: 0.1758 REMARK 3 L13: 1.0126 L23: -0.8997 REMARK 3 S TENSOR REMARK 3 S11: -0.0042 S12: -0.3026 S13: -1.0599 REMARK 3 S21: -0.0662 S22: -0.0527 S23: -0.1356 REMARK 3 S31: 0.2884 S32: -0.1613 S33: 0.0924 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN D AND (RESID 95:109 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.5672 20.2699 42.1737 REMARK 3 T TENSOR REMARK 3 T11: 0.1765 T22: 0.2262 REMARK 3 T33: 0.2386 T12: -0.0132 REMARK 3 T13: 0.0346 T23: 0.0298 REMARK 3 L TENSOR REMARK 3 L11: 1.7136 L22: 1.9191 REMARK 3 L33: 4.7848 L12: 0.5987 REMARK 3 L13: -0.6024 L23: 0.8635 REMARK 3 S TENSOR REMARK 3 S11: -0.0502 S12: 0.0117 S13: -0.2452 REMARK 3 S21: 0.0071 S22: 0.1128 S23: -0.2124 REMARK 3 S31: 0.4437 S32: -0.2725 S33: 0.0028 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN D AND (RESID 110:123 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.6168 36.7393 28.1005 REMARK 3 T TENSOR REMARK 3 T11: 0.1071 T22: 0.1754 REMARK 3 T33: 0.1628 T12: -0.0071 REMARK 3 T13: 0.0108 T23: 0.0055 REMARK 3 L TENSOR REMARK 3 L11: 3.0187 L22: 1.2211 REMARK 3 L33: 0.3799 L12: -0.3149 REMARK 3 L13: 0.7827 L23: 0.3777 REMARK 3 S TENSOR REMARK 3 S11: -0.1147 S12: 0.0992 S13: 0.2177 REMARK 3 S21: -0.0164 S22: 0.0206 S23: 0.0140 REMARK 3 S31: -0.1192 S32: 0.0865 S33: 0.0364 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: CHAIN D AND (RESID 124:194 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.4598 29.6710 29.5509 REMARK 3 T TENSOR REMARK 3 T11: 0.0866 T22: 0.1367 REMARK 3 T33: 0.1433 T12: -0.0013 REMARK 3 T13: 0.0116 T23: -0.0187 REMARK 3 L TENSOR REMARK 3 L11: 1.9714 L22: 0.5930 REMARK 3 L33: 0.9376 L12: -0.0107 REMARK 3 L13: 0.4905 L23: -0.1290 REMARK 3 S TENSOR REMARK 3 S11: -0.0175 S12: 0.1890 S13: -0.1368 REMARK 3 S21: -0.0175 S22: 0.0323 S23: 0.0269 REMARK 3 S31: -0.0283 S32: 0.0367 S33: -0.0107 REMARK 3 TLS GROUP : 28 REMARK 3 SELECTION: CHAIN D AND (RESID 195:213 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.8568 31.2614 34.1050 REMARK 3 T TENSOR REMARK 3 T11: 0.0933 T22: 0.0986 REMARK 3 T33: 0.1508 T12: 0.0025 REMARK 3 T13: 0.0135 T23: -0.0059 REMARK 3 L TENSOR REMARK 3 L11: 1.7633 L22: 1.9509 REMARK 3 L33: 1.4545 L12: 0.0720 REMARK 3 L13: 0.1267 L23: 0.5314 REMARK 3 S TENSOR REMARK 3 S11: -0.0735 S12: 0.0748 S13: -0.0806 REMARK 3 S21: 0.0946 S22: 0.0508 S23: -0.0769 REMARK 3 S31: -0.0342 S32: 0.0470 S33: -0.0039 REMARK 3 TLS GROUP : 29 REMARK 3 SELECTION: CHAIN D AND (RESID 214:229 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.8192 37.3361 42.7895 REMARK 3 T TENSOR REMARK 3 T11: 0.1246 T22: 0.1451 REMARK 3 T33: 0.1999 T12: 0.0306 REMARK 3 T13: 0.0173 T23: -0.0422 REMARK 3 L TENSOR REMARK 3 L11: 2.2112 L22: 0.8661 REMARK 3 L33: 1.6777 L12: -0.1228 REMARK 3 L13: -0.4252 L23: 0.1189 REMARK 3 S TENSOR REMARK 3 S11: -0.0154 S12: -0.2345 S13: 0.2973 REMARK 3 S21: -0.0788 S22: -0.0019 S23: 0.1725 REMARK 3 S31: -0.3159 S32: -0.1530 S33: -0.0215 REMARK 3 TLS GROUP : 30 REMARK 3 SELECTION: CHAIN D AND (RESID 230:277 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.2024 27.6685 30.0226 REMARK 3 T TENSOR REMARK 3 T11: 0.0967 T22: 0.1610 REMARK 3 T33: 0.1586 T12: -0.0002 REMARK 3 T13: 0.0248 T23: -0.0179 REMARK 3 L TENSOR REMARK 3 L11: 1.4498 L22: 0.5343 REMARK 3 L33: 1.2052 L12: 0.0691 REMARK 3 L13: 0.1168 L23: -0.3386 REMARK 3 S TENSOR REMARK 3 S11: -0.0569 S12: 0.1842 S13: -0.0932 REMARK 3 S21: -0.0554 S22: 0.0277 S23: -0.0017 REMARK 3 S31: 0.0982 S32: -0.0405 S33: 0.0213 REMARK 3 TLS GROUP : 31 REMARK 3 SELECTION: CHAIN D AND (RESID 278:289 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.6098 28.4435 19.3465 REMARK 3 T TENSOR REMARK 3 T11: 0.1227 T22: 0.3096 REMARK 3 T33: 0.2336 T12: 0.0279 REMARK 3 T13: -0.0016 T23: -0.0932 REMARK 3 L TENSOR REMARK 3 L11: 2.2957 L22: 2.7568 REMARK 3 L33: 3.2860 L12: -0.2839 REMARK 3 L13: 0.5917 L23: 0.2551 REMARK 3 S TENSOR REMARK 3 S11: -0.0487 S12: 0.6390 S13: -0.5729 REMARK 3 S21: -0.2098 S22: 0.0328 S23: -0.0572 REMARK 3 S31: 0.3642 S32: -0.0396 S33: 0.0489 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4IBT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1000076556. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUN-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH3R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : BLUE CONFOCAL MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 82678 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 36.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.6 REMARK 200 DATA REDUNDANCY : 8.400 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.3 REMARK 200 DATA REDUNDANCY IN SHELL : 8.10 REMARK 200 R MERGE FOR SHELL (I) : 0.53700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1TSR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.2M NAF, PH 6.1, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 35.10550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 94 REMARK 465 LYS A 291 REMARK 465 LYS A 292 REMARK 465 GLY A 293 REMARK 465 SER B 94 REMARK 465 ARG B 290 REMARK 465 LYS B 291 REMARK 465 LYS B 292 REMARK 465 GLY B 293 REMARK 465 LYS C 291 REMARK 465 LYS C 292 REMARK 465 GLY C 293 REMARK 465 SER D 94 REMARK 465 ARG D 290 REMARK 465 LYS D 291 REMARK 465 LYS D 292 REMARK 465 GLY D 293 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 290 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 290 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 624 O HOH A 635 2.02 REMARK 500 O SER C 260 O HOH C 632 2.06 REMARK 500 NE2 HIS A 273 O HOH A 635 2.09 REMARK 500 OE2 GLU C 258 O HOH C 623 2.11 REMARK 500 O HOH C 594 O HOH C 631 2.11 REMARK 500 OD2 ASP A 281 O HOH A 635 2.14 REMARK 500 OE2 GLU B 271 O HOH B 471 2.19 REMARK 500 OD2 ASP C 281 O HOH C 631 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 124 117.87 -160.04 REMARK 500 ASN B 288 40.38 -90.54 REMARK 500 PRO D 152 157.24 -48.29 REMARK 500 PRO D 152 158.38 -48.29 REMARK 500 SER D 183 55.61 -114.82 REMARK 500 VAL D 225 105.40 -56.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 176 SG REMARK 620 2 HIS A 179 ND1 101.2 REMARK 620 3 CYS A 238 SG 113.6 102.0 REMARK 620 4 CYS A 242 SG 114.8 100.1 120.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 176 SG REMARK 620 2 HIS B 179 ND1 96.0 REMARK 620 3 CYS B 238 SG 112.1 91.9 REMARK 620 4 CYS B 242 SG 128.4 96.5 117.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 176 SG REMARK 620 2 HIS C 179 ND1 101.1 REMARK 620 3 CYS C 238 SG 113.8 97.9 REMARK 620 4 CYS C 242 SG 120.3 100.9 117.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 176 SG REMARK 620 2 HIS D 179 ND1 98.2 REMARK 620 3 CYS D 238 SG 116.6 99.0 REMARK 620 4 CYS D 242 SG 125.0 96.0 113.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4IBQ RELATED DB: PDB REMARK 900 RELATED ID: 4IBS RELATED DB: PDB REMARK 900 RELATED ID: 4IBU RELATED DB: PDB REMARK 900 RELATED ID: 4IBV RELATED DB: PDB REMARK 900 RELATED ID: 4IBW RELATED DB: PDB REMARK 900 RELATED ID: 4IBY RELATED DB: PDB REMARK 900 RELATED ID: 4IBZ RELATED DB: PDB REMARK 900 RELATED ID: 4IJT RELATED DB: PDB DBREF 4IBT A 94 293 UNP P04637 P53_HUMAN 94 293 DBREF 4IBT B 94 293 UNP P04637 P53_HUMAN 94 293 DBREF 4IBT C 94 293 UNP P04637 P53_HUMAN 94 293 DBREF 4IBT D 94 293 UNP P04637 P53_HUMAN 94 293 SEQADV 4IBT HIS A 273 UNP P04637 ARG 273 ENGINEERED MUTATION SEQADV 4IBT ARG A 284 UNP P04637 THR 284 ENGINEERED MUTATION SEQADV 4IBT HIS B 273 UNP P04637 ARG 273 ENGINEERED MUTATION SEQADV 4IBT ARG B 284 UNP P04637 THR 284 ENGINEERED MUTATION SEQADV 4IBT HIS C 273 UNP P04637 ARG 273 ENGINEERED MUTATION SEQADV 4IBT ARG C 284 UNP P04637 THR 284 ENGINEERED MUTATION SEQADV 4IBT HIS D 273 UNP P04637 ARG 273 ENGINEERED MUTATION SEQADV 4IBT ARG D 284 UNP P04637 THR 284 ENGINEERED MUTATION SEQRES 1 A 200 SER SER SER VAL PRO SER GLN LYS THR TYR GLN GLY SER SEQRES 2 A 200 TYR GLY PHE ARG LEU GLY PHE LEU HIS SER GLY THR ALA SEQRES 3 A 200 LYS SER VAL THR CYS THR TYR SER PRO ALA LEU ASN LYS SEQRES 4 A 200 MET PHE CYS GLN LEU ALA LYS THR CYS PRO VAL GLN LEU SEQRES 5 A 200 TRP VAL ASP SER THR PRO PRO PRO GLY THR ARG VAL ARG SEQRES 6 A 200 ALA MET ALA ILE TYR LYS GLN SER GLN HIS MET THR GLU SEQRES 7 A 200 VAL VAL ARG ARG CYS PRO HIS HIS GLU ARG CYS SER ASP SEQRES 8 A 200 SER ASP GLY LEU ALA PRO PRO GLN HIS LEU ILE ARG VAL SEQRES 9 A 200 GLU GLY ASN LEU ARG VAL GLU TYR LEU ASP ASP ARG ASN SEQRES 10 A 200 THR PHE ARG HIS SER VAL VAL VAL PRO TYR GLU PRO PRO SEQRES 11 A 200 GLU VAL GLY SER ASP CYS THR THR ILE HIS TYR ASN TYR SEQRES 12 A 200 MET CYS ASN SER SER CYS MET GLY GLY MET ASN ARG ARG SEQRES 13 A 200 PRO ILE LEU THR ILE ILE THR LEU GLU ASP SER SER GLY SEQRES 14 A 200 ASN LEU LEU GLY ARG ASN SER PHE GLU VAL HIS VAL CYS SEQRES 15 A 200 ALA CYS PRO GLY ARG ASP ARG ARG ARG GLU GLU GLU ASN SEQRES 16 A 200 LEU ARG LYS LYS GLY SEQRES 1 B 200 SER SER SER VAL PRO SER GLN LYS THR TYR GLN GLY SER SEQRES 2 B 200 TYR GLY PHE ARG LEU GLY PHE LEU HIS SER GLY THR ALA SEQRES 3 B 200 LYS SER VAL THR CYS THR TYR SER PRO ALA LEU ASN LYS SEQRES 4 B 200 MET PHE CYS GLN LEU ALA LYS THR CYS PRO VAL GLN LEU SEQRES 5 B 200 TRP VAL ASP SER THR PRO PRO PRO GLY THR ARG VAL ARG SEQRES 6 B 200 ALA MET ALA ILE TYR LYS GLN SER GLN HIS MET THR GLU SEQRES 7 B 200 VAL VAL ARG ARG CYS PRO HIS HIS GLU ARG CYS SER ASP SEQRES 8 B 200 SER ASP GLY LEU ALA PRO PRO GLN HIS LEU ILE ARG VAL SEQRES 9 B 200 GLU GLY ASN LEU ARG VAL GLU TYR LEU ASP ASP ARG ASN SEQRES 10 B 200 THR PHE ARG HIS SER VAL VAL VAL PRO TYR GLU PRO PRO SEQRES 11 B 200 GLU VAL GLY SER ASP CYS THR THR ILE HIS TYR ASN TYR SEQRES 12 B 200 MET CYS ASN SER SER CYS MET GLY GLY MET ASN ARG ARG SEQRES 13 B 200 PRO ILE LEU THR ILE ILE THR LEU GLU ASP SER SER GLY SEQRES 14 B 200 ASN LEU LEU GLY ARG ASN SER PHE GLU VAL HIS VAL CYS SEQRES 15 B 200 ALA CYS PRO GLY ARG ASP ARG ARG ARG GLU GLU GLU ASN SEQRES 16 B 200 LEU ARG LYS LYS GLY SEQRES 1 C 200 SER SER SER VAL PRO SER GLN LYS THR TYR GLN GLY SER SEQRES 2 C 200 TYR GLY PHE ARG LEU GLY PHE LEU HIS SER GLY THR ALA SEQRES 3 C 200 LYS SER VAL THR CYS THR TYR SER PRO ALA LEU ASN LYS SEQRES 4 C 200 MET PHE CYS GLN LEU ALA LYS THR CYS PRO VAL GLN LEU SEQRES 5 C 200 TRP VAL ASP SER THR PRO PRO PRO GLY THR ARG VAL ARG SEQRES 6 C 200 ALA MET ALA ILE TYR LYS GLN SER GLN HIS MET THR GLU SEQRES 7 C 200 VAL VAL ARG ARG CYS PRO HIS HIS GLU ARG CYS SER ASP SEQRES 8 C 200 SER ASP GLY LEU ALA PRO PRO GLN HIS LEU ILE ARG VAL SEQRES 9 C 200 GLU GLY ASN LEU ARG VAL GLU TYR LEU ASP ASP ARG ASN SEQRES 10 C 200 THR PHE ARG HIS SER VAL VAL VAL PRO TYR GLU PRO PRO SEQRES 11 C 200 GLU VAL GLY SER ASP CYS THR THR ILE HIS TYR ASN TYR SEQRES 12 C 200 MET CYS ASN SER SER CYS MET GLY GLY MET ASN ARG ARG SEQRES 13 C 200 PRO ILE LEU THR ILE ILE THR LEU GLU ASP SER SER GLY SEQRES 14 C 200 ASN LEU LEU GLY ARG ASN SER PHE GLU VAL HIS VAL CYS SEQRES 15 C 200 ALA CYS PRO GLY ARG ASP ARG ARG ARG GLU GLU GLU ASN SEQRES 16 C 200 LEU ARG LYS LYS GLY SEQRES 1 D 200 SER SER SER VAL PRO SER GLN LYS THR TYR GLN GLY SER SEQRES 2 D 200 TYR GLY PHE ARG LEU GLY PHE LEU HIS SER GLY THR ALA SEQRES 3 D 200 LYS SER VAL THR CYS THR TYR SER PRO ALA LEU ASN LYS SEQRES 4 D 200 MET PHE CYS GLN LEU ALA LYS THR CYS PRO VAL GLN LEU SEQRES 5 D 200 TRP VAL ASP SER THR PRO PRO PRO GLY THR ARG VAL ARG SEQRES 6 D 200 ALA MET ALA ILE TYR LYS GLN SER GLN HIS MET THR GLU SEQRES 7 D 200 VAL VAL ARG ARG CYS PRO HIS HIS GLU ARG CYS SER ASP SEQRES 8 D 200 SER ASP GLY LEU ALA PRO PRO GLN HIS LEU ILE ARG VAL SEQRES 9 D 200 GLU GLY ASN LEU ARG VAL GLU TYR LEU ASP ASP ARG ASN SEQRES 10 D 200 THR PHE ARG HIS SER VAL VAL VAL PRO TYR GLU PRO PRO SEQRES 11 D 200 GLU VAL GLY SER ASP CYS THR THR ILE HIS TYR ASN TYR SEQRES 12 D 200 MET CYS ASN SER SER CYS MET GLY GLY MET ASN ARG ARG SEQRES 13 D 200 PRO ILE LEU THR ILE ILE THR LEU GLU ASP SER SER GLY SEQRES 14 D 200 ASN LEU LEU GLY ARG ASN SER PHE GLU VAL HIS VAL CYS SEQRES 15 D 200 ALA CYS PRO GLY ARG ASP ARG ARG ARG GLU GLU GLU ASN SEQRES 16 D 200 LEU ARG LYS LYS GLY HET ZN A 301 1 HET ZN B 301 1 HET ZN C 301 1 HET ZN D 301 1 HETNAM ZN ZINC ION FORMUL 5 ZN 4(ZN 2+) FORMUL 9 HOH *971(H2 O) HELIX 1 1 GLN A 165 MET A 169 5 5 HELIX 2 2 CYS A 176 ARG A 181 1 6 HELIX 3 3 CYS A 277 ASN A 288 1 12 HELIX 4 4 CYS B 176 CYS B 182 1 7 HELIX 5 5 CYS B 277 GLU B 287 1 11 HELIX 6 6 GLN C 165 MET C 169 5 5 HELIX 7 7 CYS C 176 ARG C 181 1 6 HELIX 8 8 CYS C 277 ASN C 288 1 12 HELIX 9 9 CYS D 176 ARG D 181 1 6 HELIX 10 10 CYS D 277 GLU D 286 1 10 HELIX 11 11 GLU D 287 LEU D 289 5 3 SHEET 1 A 4 ARG A 110 GLY A 112 0 SHEET 2 A 4 CYS A 141 TRP A 146 -1 O GLN A 144 N GLY A 112 SHEET 3 A 4 THR A 230 TYR A 236 -1 O THR A 230 N LEU A 145 SHEET 4 A 4 ILE A 195 VAL A 197 -1 N ARG A 196 O ASN A 235 SHEET 1 B 7 CYS A 124 SER A 127 0 SHEET 2 B 7 LYS A 132 CYS A 135 -1 O PHE A 134 N THR A 125 SHEET 3 B 7 LEU A 264 VAL A 274 1 O GLU A 271 N MET A 133 SHEET 4 B 7 ILE A 251 GLU A 258 -1 N LEU A 257 O LEU A 265 SHEET 5 B 7 ARG A 156 TYR A 163 -1 N MET A 160 O ILE A 254 SHEET 6 B 7 HIS A 214 PRO A 219 -1 O VAL A 218 N VAL A 157 SHEET 7 B 7 GLU A 204 ASP A 207 -1 N GLU A 204 O VAL A 217 SHEET 1 C 4 ARG B 110 GLY B 112 0 SHEET 2 C 4 CYS B 141 TRP B 146 -1 O TRP B 146 N ARG B 110 SHEET 3 C 4 THR B 230 TYR B 236 -1 O THR B 230 N LEU B 145 SHEET 4 C 4 ILE B 195 GLU B 198 -1 N GLU B 198 O HIS B 233 SHEET 1 D 7 THR B 125 SER B 127 0 SHEET 2 D 7 LYS B 132 CYS B 135 -1 O PHE B 134 N THR B 125 SHEET 3 D 7 LEU B 264 VAL B 274 1 O GLU B 271 N MET B 133 SHEET 4 D 7 ILE B 251 GLU B 258 -1 N LEU B 257 O LEU B 265 SHEET 5 D 7 ARG B 156 TYR B 163 -1 N MET B 160 O ILE B 254 SHEET 6 D 7 HIS B 214 PRO B 219 -1 O VAL B 218 N VAL B 157 SHEET 7 D 7 GLU B 204 ASP B 207 -1 N GLU B 204 O VAL B 217 SHEET 1 E 4 ARG C 110 GLY C 112 0 SHEET 2 E 4 CYS C 141 TRP C 146 -1 O TRP C 146 N ARG C 110 SHEET 3 E 4 THR C 230 TYR C 236 -1 O THR C 230 N LEU C 145 SHEET 4 E 4 ILE C 195 GLU C 198 -1 N GLU C 198 O HIS C 233 SHEET 1 F 7 CYS C 124 SER C 127 0 SHEET 2 F 7 LYS C 132 CYS C 135 -1 O PHE C 134 N THR C 125 SHEET 3 F 7 LEU C 264 VAL C 274 1 O GLU C 271 N MET C 133 SHEET 4 F 7 ILE C 251 GLU C 258 -1 N LEU C 257 O LEU C 265 SHEET 5 F 7 ARG C 156 TYR C 163 -1 N MET C 160 O ILE C 254 SHEET 6 F 7 HIS C 214 PRO C 219 -1 O VAL C 218 N VAL C 157 SHEET 7 F 7 GLU C 204 ASP C 207 -1 N GLU C 204 O VAL C 217 SHEET 1 G 4 ARG D 110 GLY D 112 0 SHEET 2 G 4 CYS D 141 TRP D 146 -1 O TRP D 146 N ARG D 110 SHEET 3 G 4 THR D 230 TYR D 236 -1 O THR D 230 N LEU D 145 SHEET 4 G 4 ILE D 195 GLU D 198 -1 N GLU D 198 O HIS D 233 SHEET 1 H 7 CYS D 124 SER D 127 0 SHEET 2 H 7 LYS D 132 CYS D 135 -1 O PHE D 134 N THR D 125 SHEET 3 H 7 LEU D 264 VAL D 274 1 O GLU D 271 N MET D 133 SHEET 4 H 7 ILE D 251 GLU D 258 -1 N LEU D 257 O LEU D 265 SHEET 5 H 7 ARG D 156 TYR D 163 -1 N MET D 160 O ILE D 254 SHEET 6 H 7 HIS D 214 PRO D 219 -1 O VAL D 218 N VAL D 157 SHEET 7 H 7 GLU D 204 ASP D 207 -1 N GLU D 204 O VAL D 217 LINK SG CYS A 176 ZN ZN A 301 1555 1555 2.38 LINK ND1 HIS A 179 ZN ZN A 301 1555 1555 2.04 LINK SG CYS A 238 ZN ZN A 301 1555 1555 2.41 LINK SG CYS A 242 ZN ZN A 301 1555 1555 2.50 LINK SG CYS B 176 ZN ZN B 301 1555 1555 2.38 LINK ND1 HIS B 179 ZN ZN B 301 1555 1555 2.09 LINK SG CYS B 238 ZN ZN B 301 1555 1555 2.47 LINK SG CYS B 242 ZN ZN B 301 1555 1555 2.40 LINK SG CYS C 176 ZN ZN C 301 1555 1555 2.39 LINK ND1 HIS C 179 ZN ZN C 301 1555 1555 2.01 LINK SG CYS C 238 ZN ZN C 301 1555 1555 2.39 LINK SG CYS C 242 ZN ZN C 301 1555 1555 2.38 LINK SG CYS D 176 ZN ZN D 301 1555 1555 2.37 LINK ND1 HIS D 179 ZN ZN D 301 1555 1555 2.04 LINK SG CYS D 238 ZN ZN D 301 1555 1555 2.38 LINK SG CYS D 242 ZN ZN D 301 1555 1555 2.43 CISPEP 1 SER D 95 SER D 96 0 -5.31 SITE 1 AC1 4 CYS A 176 HIS A 179 CYS A 238 CYS A 242 SITE 1 AC2 4 CYS B 176 HIS B 179 CYS B 238 CYS B 242 SITE 1 AC3 4 CYS C 176 HIS C 179 CYS C 238 CYS C 242 SITE 1 AC4 4 CYS D 176 HIS D 179 CYS D 238 CYS D 242 CRYST1 68.928 70.211 84.010 90.00 90.05 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014508 0.000000 0.000013 0.00000 SCALE2 0.000000 0.014243 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011903 0.00000