HEADER OXIDOREDUCTASE 12-DEC-12 4IDC TITLE STRUCTURE OF THE FRAGARIA X ANANASSA ENONE OXIDOREDUCTASE IN COMPLEX TITLE 2 WITH NADPH AND HDMF COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIPENING-INDUCED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 17-336; COMPND 5 SYNONYM: FAEO; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FRAGARIA VESCA; SOURCE 3 ORGANISM_COMMON: WOODLAND STRAWBERRY; SOURCE 4 ORGANISM_TAXID: 57918; SOURCE 5 GENE: GENE28406; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: JM83; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PASK-IBA5PLUS KEYWDS MEDIUM CHAIN DEHYDROGENASE/REDUCTASE FAMILY, ZINC-INDEPENDENT, KEYWDS 2 ROSSMANN FOLD, ENONE OXIDOREDUCTASE, FURANEOL, HYDRIDE TRANSFER, KEYWDS 3 NADPH, NADH, HDMF, 4-HYDROXY-2, 5-DIMETHYL-3(2H)-FURANONE, KEYWDS 4 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR A.SCHIEFNER,A.SKERRA REVDAT 3 08-NOV-23 4IDC 1 REMARK SEQADV REVDAT 2 05-MAR-14 4IDC 1 JRNL REVDAT 1 17-APR-13 4IDC 0 JRNL AUTH A.SCHIEFNER,Q.SINZ,I.NEUMAIER,W.SCHWAB,A.SKERRA JRNL TITL STRUCTURAL BASIS FOR THE ENZYMATIC FORMATION OF THE KEY JRNL TITL 2 STRAWBERRY FLAVOR COMPOUND JRNL TITL 3 4-HYDROXY-2,5-DIMETHYL-3(2H)-FURANONE JRNL REF J.BIOL.CHEM. V. 288 16815 2013 JRNL REFN ISSN 0021-9258 JRNL PMID 23589283 JRNL DOI 10.1074/JBC.M113.453852 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 86971 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.140 REMARK 3 R VALUE (WORKING SET) : 0.139 REMARK 3 FREE R VALUE : 0.160 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2628 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.44 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6118 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2200 REMARK 3 BIN FREE R VALUE SET COUNT : 176 REMARK 3 BIN FREE R VALUE : 0.2320 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2405 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 70 REMARK 3 SOLVENT ATOMS : 500 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.38 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.02000 REMARK 3 B22 (A**2) : -0.02000 REMARK 3 B33 (A**2) : 0.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.040 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.043 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.025 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.145 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.977 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.970 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2600 ; 0.018 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2533 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3562 ; 2.015 ; 2.023 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5885 ; 0.873 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 339 ; 6.716 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 86 ;36.575 ;25.116 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 424 ;10.837 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;20.037 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 422 ; 0.125 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2871 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 503 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 7 REMARK 3 ORIGIN FOR THE GROUP (A): -35.4675 7.1502 28.9326 REMARK 3 T TENSOR REMARK 3 T11: 0.3113 T22: 0.3675 REMARK 3 T33: 0.2662 T12: 0.0315 REMARK 3 T13: 0.0374 T23: 0.0932 REMARK 3 L TENSOR REMARK 3 L11: 19.1733 L22: 17.2837 REMARK 3 L33: 8.7765 L12: 12.3593 REMARK 3 L13: 7.6012 L23: 5.9380 REMARK 3 S TENSOR REMARK 3 S11: 0.6949 S12: -1.3994 S13: -0.1001 REMARK 3 S21: 0.7416 S22: -0.6649 S23: 0.5441 REMARK 3 S31: 0.8527 S32: -0.5473 S33: -0.0300 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 8 A 149 REMARK 3 ORIGIN FOR THE GROUP (A): -30.8550 18.7538 11.4580 REMARK 3 T TENSOR REMARK 3 T11: 0.0156 T22: 0.0822 REMARK 3 T33: 0.0061 T12: 0.0005 REMARK 3 T13: -0.0051 T23: 0.0139 REMARK 3 L TENSOR REMARK 3 L11: 0.8617 L22: 1.3001 REMARK 3 L33: 1.3012 L12: -0.1932 REMARK 3 L13: 0.1614 L23: -0.2714 REMARK 3 S TENSOR REMARK 3 S11: 0.0055 S12: -0.1027 S13: -0.0097 REMARK 3 S21: 0.0340 S22: 0.0033 S23: 0.0330 REMARK 3 S31: -0.0038 S32: 0.0327 S33: -0.0087 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 150 A 222 REMARK 3 ORIGIN FOR THE GROUP (A): -29.7157 13.1525 -16.6099 REMARK 3 T TENSOR REMARK 3 T11: 0.0979 T22: 0.0976 REMARK 3 T33: 0.0221 T12: 0.0187 REMARK 3 T13: -0.0057 T23: -0.0227 REMARK 3 L TENSOR REMARK 3 L11: 2.2471 L22: 1.2091 REMARK 3 L33: 2.0544 L12: 0.1666 REMARK 3 L13: 0.6835 L23: 0.1804 REMARK 3 S TENSOR REMARK 3 S11: 0.0037 S12: 0.2218 S13: -0.1198 REMARK 3 S21: -0.1815 S22: 0.0305 S23: -0.1028 REMARK 3 S31: 0.1045 S32: 0.2629 S33: -0.0342 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 223 A 279 REMARK 3 ORIGIN FOR THE GROUP (A): -36.6950 19.9588 -14.1759 REMARK 3 T TENSOR REMARK 3 T11: 0.0696 T22: 0.0751 REMARK 3 T33: 0.0251 T12: -0.0010 REMARK 3 T13: -0.0205 T23: -0.0102 REMARK 3 L TENSOR REMARK 3 L11: 0.7859 L22: 1.1175 REMARK 3 L33: 2.6460 L12: -0.2735 REMARK 3 L13: 0.5242 L23: 0.0051 REMARK 3 S TENSOR REMARK 3 S11: 0.0011 S12: 0.1256 S13: 0.0173 REMARK 3 S21: -0.1939 S22: 0.0192 S23: -0.0327 REMARK 3 S31: -0.1184 S32: 0.0839 S33: -0.0203 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 280 A 285 REMARK 3 ORIGIN FOR THE GROUP (A): -33.5869 0.3317 -4.8287 REMARK 3 T TENSOR REMARK 3 T11: 0.1379 T22: 0.0810 REMARK 3 T33: 0.1017 T12: 0.0128 REMARK 3 T13: -0.0549 T23: -0.0100 REMARK 3 L TENSOR REMARK 3 L11: 9.6483 L22: 18.8799 REMARK 3 L33: 8.7221 L12: 1.8812 REMARK 3 L13: -3.9649 L23: -1.4017 REMARK 3 S TENSOR REMARK 3 S11: -0.1288 S12: 0.3256 S13: -0.4696 REMARK 3 S21: -0.5368 S22: 0.0789 S23: 0.4120 REMARK 3 S31: 0.5499 S32: -0.2984 S33: 0.0498 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 286 A 321 REMARK 3 ORIGIN FOR THE GROUP (A): -18.4005 15.4237 2.2699 REMARK 3 T TENSOR REMARK 3 T11: 0.0204 T22: 0.1417 REMARK 3 T33: 0.0373 T12: 0.0181 REMARK 3 T13: 0.0030 T23: 0.0135 REMARK 3 L TENSOR REMARK 3 L11: 1.0637 L22: 1.7934 REMARK 3 L33: 1.8058 L12: 0.1842 REMARK 3 L13: 0.3146 L23: -0.0115 REMARK 3 S TENSOR REMARK 3 S11: 0.0323 S12: 0.0449 S13: -0.0281 REMARK 3 S21: -0.0833 S22: -0.0324 S23: -0.1332 REMARK 3 S31: 0.0446 S32: 0.3048 S33: 0.0002 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES: WITH TLS ADDED REMARK 4 REMARK 4 4IDC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-DEC-12. REMARK 100 THE DEPOSITION ID IS D_1000076609. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91841 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 86971 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.890 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.9700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.49600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.750 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1IYZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 21-16% (W/V) PEG 3350, 0.2M LI2SO4, REMARK 280 0.1M TRIS/HCL PH 7.0-8.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K, PH 8.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 87.49200 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 35.12050 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 35.12050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 131.23800 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 35.12050 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 35.12050 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 43.74600 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 35.12050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 35.12050 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 131.23800 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 35.12050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 35.12050 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 43.74600 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 87.49200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -10 REMARK 465 ALA A -9 REMARK 465 SER A -8 REMARK 465 TRP A -7 REMARK 465 SER A -6 REMARK 465 HIS A -5 REMARK 465 PRO A -4 REMARK 465 GLN A -3 REMARK 465 PHE A -2 REMARK 465 GLU A -1 REMARK 465 LYS A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 42 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP A 67 CB - CG - OD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 ARG A 114 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 33 81.60 -151.09 REMARK 500 GLU A 236 58.38 -153.06 REMARK 500 GLU A 236 48.88 -146.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1XX A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 405 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4IDA RELATED DB: PDB REMARK 900 RELATED ID: 4IDB RELATED DB: PDB REMARK 900 RELATED ID: 4IDD RELATED DB: PDB REMARK 900 RELATED ID: 4IDE RELATED DB: PDB REMARK 900 RELATED ID: 4IDF RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 NATURAL VARIANT AT THIS POSITION DBREF 4IDC A 2 321 UNP O23939 O23939_FRAVE 17 336 SEQADV 4IDC MET A -10 UNP O23939 EXPRESSION TAG SEQADV 4IDC ALA A -9 UNP O23939 EXPRESSION TAG SEQADV 4IDC SER A -8 UNP O23939 EXPRESSION TAG SEQADV 4IDC TRP A -7 UNP O23939 EXPRESSION TAG SEQADV 4IDC SER A -6 UNP O23939 EXPRESSION TAG SEQADV 4IDC HIS A -5 UNP O23939 EXPRESSION TAG SEQADV 4IDC PRO A -4 UNP O23939 EXPRESSION TAG SEQADV 4IDC GLN A -3 UNP O23939 EXPRESSION TAG SEQADV 4IDC PHE A -2 UNP O23939 EXPRESSION TAG SEQADV 4IDC GLU A -1 UNP O23939 EXPRESSION TAG SEQADV 4IDC LYS A 0 UNP O23939 EXPRESSION TAG SEQADV 4IDC GLY A 1 UNP O23939 EXPRESSION TAG SEQADV 4IDC ASP A 79 UNP O23939 TYR 94 SEE REMARK 999 SEQRES 1 A 332 MET ALA SER TRP SER HIS PRO GLN PHE GLU LYS GLY ALA SEQRES 2 A 332 ALA ALA PRO SER GLU SER ILE PRO SER VAL ASN LYS ALA SEQRES 3 A 332 TRP VAL TYR SER GLU TYR GLY LYS THR SER ASP VAL LEU SEQRES 4 A 332 LYS PHE ASP PRO SER VAL ALA VAL PRO GLU ILE LYS GLU SEQRES 5 A 332 ASP GLN VAL LEU ILE LYS VAL VAL ALA ALA SER LEU ASN SEQRES 6 A 332 PRO VAL ASP PHE LYS ARG ALA LEU GLY TYR PHE LYS ASP SEQRES 7 A 332 THR ASP SER PRO LEU PRO THR ILE PRO GLY TYR ASP VAL SEQRES 8 A 332 ALA GLY VAL VAL VAL LYS VAL GLY SER GLN VAL THR LYS SEQRES 9 A 332 PHE LYS VAL GLY ASP GLU VAL TYR GLY ASP LEU ASN GLU SEQRES 10 A 332 THR ALA LEU VAL ASN PRO THR ARG PHE GLY SER LEU ALA SEQRES 11 A 332 GLU TYR THR ALA ALA ASP GLU ARG VAL LEU ALA HIS LYS SEQRES 12 A 332 PRO LYS ASN LEU SER PHE ILE GLU ALA ALA SER LEU PRO SEQRES 13 A 332 LEU ALA ILE GLU THR ALA HIS GLU GLY LEU GLU ARG ALA SEQRES 14 A 332 GLU LEU SER ALA GLY LYS SER VAL LEU VAL LEU GLY GLY SEQRES 15 A 332 ALA GLY GLY VAL GLY THR HIS ILE ILE GLN LEU ALA LYS SEQRES 16 A 332 HIS VAL PHE GLY ALA SER LYS VAL ALA ALA THR ALA SER SEQRES 17 A 332 THR LYS LYS LEU ASP LEU LEU ARG THR LEU GLY ALA ASP SEQRES 18 A 332 LEU ALA ILE ASP TYR THR LYS GLU ASN PHE GLU ASP LEU SEQRES 19 A 332 PRO GLU LYS PHE ASP VAL VAL TYR ASP ALA VAL GLY GLU SEQRES 20 A 332 THR ASP LYS ALA VAL LYS ALA VAL LYS GLU GLY GLY LYS SEQRES 21 A 332 VAL VAL THR ILE VAL GLY PRO ALA THR PRO PRO ALA ILE SEQRES 22 A 332 LEU PHE VAL LEU THR SER LYS GLY SER VAL LEU GLU LYS SEQRES 23 A 332 LEU LYS PRO TYR LEU GLU SER GLY LYS VAL LYS PRO VAL SEQRES 24 A 332 LEU ASP PRO THR SER PRO TYR PRO PHE THR LYS VAL VAL SEQRES 25 A 332 GLU ALA PHE GLY TYR LEU GLU SER SER ARG ALA THR GLY SEQRES 26 A 332 LYS VAL VAL VAL TYR PRO ILE HET NDP A 401 48 HET 1XX A 402 9 HET SO4 A 403 5 HET EDO A 404 4 HET EDO A 405 4 HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE HETNAM 1XX (2R)-4-HYDROXY-2,5-DIMETHYLFURAN-3(2H)-ONE HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 NDP C21 H30 N7 O17 P3 FORMUL 3 1XX C6 H8 O3 FORMUL 4 SO4 O4 S 2- FORMUL 5 EDO 2(C2 H6 O2) FORMUL 7 HOH *500(H2 O) HELIX 1 1 PRO A 5 ILE A 9 5 5 HELIX 2 2 LYS A 23 LEU A 28 1 6 HELIX 3 3 ASN A 54 LEU A 62 1 9 HELIX 4 4 PHE A 65 ASP A 69 5 5 HELIX 5 5 SER A 137 LEU A 144 1 8 HELIX 6 6 LEU A 144 ALA A 158 1 15 HELIX 7 7 GLY A 173 VAL A 186 1 14 HELIX 8 8 SER A 197 LYS A 199 5 3 HELIX 9 9 LYS A 200 GLY A 208 1 9 HELIX 10 10 ASN A 219 LEU A 223 5 5 HELIX 11 11 GLU A 236 VAL A 241 1 6 HELIX 12 12 LYS A 269 SER A 282 1 14 HELIX 13 13 PRO A 296 THR A 298 5 3 HELIX 14 14 LYS A 299 GLU A 308 1 10 SHEET 1 A 2 VAL A 12 VAL A 17 0 SHEET 2 A 2 LYS A 29 ALA A 35 -1 O VAL A 34 N ASN A 13 SHEET 1 B 5 TYR A 121 ASP A 125 0 SHEET 2 B 5 GLN A 43 SER A 52 -1 N ILE A 46 O THR A 122 SHEET 3 B 5 ASP A 79 VAL A 87 -1 O VAL A 83 N LYS A 47 SHEET 4 B 5 GLU A 99 ASP A 103 -1 O VAL A 100 N GLY A 82 SHEET 5 B 5 LEU A 129 HIS A 131 -1 O ALA A 130 N TYR A 101 SHEET 1 C 3 TYR A 121 ASP A 125 0 SHEET 2 C 3 GLN A 43 SER A 52 -1 N ILE A 46 O THR A 122 SHEET 3 C 3 VAL A 317 VAL A 318 -1 O VAL A 318 N ALA A 51 SHEET 1 D 6 LEU A 211 ASP A 214 0 SHEET 2 D 6 LYS A 191 ALA A 196 1 N ALA A 194 O ILE A 213 SHEET 3 D 6 SER A 165 LEU A 169 1 N VAL A 166 O ALA A 193 SHEET 4 D 6 PHE A 227 ASP A 232 1 O TYR A 231 N LEU A 167 SHEET 5 D 6 VAL A 244 THR A 252 1 O VAL A 251 N ASP A 232 SHEET 6 D 6 ILE A 262 LEU A 263 1 O ILE A 262 N THR A 252 CISPEP 1 LEU A 72 PRO A 73 0 -10.25 CISPEP 2 GLY A 255 PRO A 256 0 -3.56 CISPEP 3 PRO A 259 PRO A 260 0 16.97 CISPEP 4 SER A 293 PRO A 294 0 -5.25 CISPEP 5 TYR A 319 PRO A 320 0 -4.43 SITE 1 AC1 37 PRO A 55 LYS A 59 LEU A 146 THR A 150 SITE 2 AC1 37 GLY A 170 ALA A 172 GLY A 173 GLY A 174 SITE 3 AC1 37 VAL A 175 THR A 195 SER A 197 LYS A 200 SITE 4 AC1 37 TYR A 215 ALA A 233 VAL A 234 ILE A 253 SITE 5 AC1 37 VAL A 254 PHE A 264 VAL A 265 LEU A 266 SITE 6 AC1 37 SER A 310 ARG A 311 ALA A 312 1XX A 402 SITE 7 AC1 37 HOH A 502 HOH A 503 HOH A 504 HOH A 506 SITE 8 AC1 37 HOH A 507 HOH A 508 HOH A 579 HOH A 629 SITE 9 AC1 37 HOH A 740 HOH A 743 HOH A 750 HOH A 905 SITE 10 AC1 37 HOH A 967 SITE 1 AC2 6 VAL A 56 LYS A 59 LEU A 109 NDP A 401 SITE 2 AC2 6 HOH A 501 HOH A 825 SITE 1 AC3 5 ARG A 127 LYS A 269 SER A 271 HOH A 552 SITE 2 AC3 5 HOH A 815 SITE 1 AC4 8 VAL A 49 GLY A 163 SER A 190 ASP A 228 SITE 2 AC4 8 LYS A 245 HOH A 581 HOH A 620 HOH A 884 SITE 1 AC5 4 SER A 137 PHE A 138 ILE A 139 HOH A 898 CRYST1 70.241 70.241 174.984 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014237 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014237 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005715 0.00000