HEADER HYDROLASE 20-DEC-12 4IIY TITLE STRUCTURE OF MCCF IN COMPLEX WITH GLUTAMYL SULFAMOYL INOSINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MCCF; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MICROCIN C7 SELF-IMMUNITY PROTEIN MCCF; COMPND 5 EC: 3.4.-.-; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: MCCF; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA2(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET19 KEYWDS CARBOXYPEPTIDASE, ESI, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR V.AGARWAL,S.K.NAIR REVDAT 4 20-SEP-23 4IIY 1 REMARK SEQADV REVDAT 3 17-JUL-19 4IIY 1 REMARK REVDAT 2 15-NOV-17 4IIY 1 REMARK REVDAT 1 25-DEC-13 4IIY 0 JRNL AUTH V.AGARWAL,S.K.NAIR JRNL TITL STRUCTURE OF MCCF WITH SUBSTRATE ANALOGS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.1_743 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.53 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 203453 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.175 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 10247 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.5468 - 3.7263 1.00 6640 368 0.1536 0.1608 REMARK 3 2 3.7263 - 2.9583 1.00 6600 343 0.1612 0.1779 REMARK 3 3 2.9583 - 2.5845 1.00 6585 330 0.1691 0.1661 REMARK 3 4 2.5845 - 2.3483 1.00 6562 353 0.1600 0.1578 REMARK 3 5 2.3483 - 2.1800 1.00 6545 354 0.1568 0.1868 REMARK 3 6 2.1800 - 2.0515 1.00 6530 357 0.1575 0.1773 REMARK 3 7 2.0515 - 1.9487 1.00 6524 344 0.1575 0.1696 REMARK 3 8 1.9487 - 1.8639 1.00 6526 380 0.1546 0.1663 REMARK 3 9 1.8639 - 1.7922 1.00 6517 328 0.1516 0.1740 REMARK 3 10 1.7922 - 1.7303 0.99 6500 340 0.1462 0.1548 REMARK 3 11 1.7303 - 1.6762 0.99 6506 347 0.1473 0.1632 REMARK 3 12 1.6762 - 1.6283 0.99 6485 338 0.1488 0.1617 REMARK 3 13 1.6283 - 1.5854 0.99 6480 329 0.1455 0.1570 REMARK 3 14 1.5854 - 1.5468 0.99 6427 353 0.1521 0.1696 REMARK 3 15 1.5468 - 1.5116 0.99 6457 343 0.1540 0.1614 REMARK 3 16 1.5116 - 1.4794 0.99 6417 376 0.1556 0.1627 REMARK 3 17 1.4794 - 1.4498 0.98 6394 363 0.1615 0.1746 REMARK 3 18 1.4498 - 1.4225 0.98 6434 334 0.1673 0.1875 REMARK 3 19 1.4225 - 1.3971 0.98 6366 331 0.1682 0.1744 REMARK 3 20 1.3971 - 1.3734 0.98 6410 349 0.1765 0.2118 REMARK 3 21 1.3734 - 1.3512 0.98 6427 325 0.1779 0.1857 REMARK 3 22 1.3512 - 1.3304 0.98 6322 354 0.1823 0.1901 REMARK 3 23 1.3304 - 1.3109 0.97 6375 314 0.1859 0.2036 REMARK 3 24 1.3109 - 1.2924 0.97 6373 340 0.1923 0.2179 REMARK 3 25 1.2924 - 1.2749 0.97 6323 327 0.2004 0.2077 REMARK 3 26 1.2749 - 1.2584 0.97 6322 374 0.2104 0.2133 REMARK 3 27 1.2584 - 1.2427 0.97 6251 354 0.2132 0.2182 REMARK 3 28 1.2427 - 1.2277 0.97 6309 314 0.2232 0.2531 REMARK 3 29 1.2277 - 1.2134 0.97 6330 303 0.2360 0.2218 REMARK 3 30 1.2134 - 1.2000 0.95 6269 282 0.2479 0.2654 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.39 REMARK 3 B_SOL : 45.59 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.860 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01180 REMARK 3 B22 (A**2) : -0.01450 REMARK 3 B33 (A**2) : 0.02630 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00900 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 5588 REMARK 3 ANGLE : 1.140 7580 REMARK 3 CHIRALITY : 0.073 860 REMARK 3 PLANARITY : 0.005 951 REMARK 3 DIHEDRAL : 12.049 2089 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4IIY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1000076810. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-APR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : DIAMOND(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 203462 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.200 REMARK 200 RESOLUTION RANGE LOW (A) : 71.832 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : 0.04100 REMARK 200 R SYM (I) : 0.06200 REMARK 200 FOR THE DATA SET : 27.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.22 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.53900 REMARK 200 R SYM FOR SHELL (I) : 0.62600 REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 3TLA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS, PH 7.5, 8% PEG8000, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 282K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 43.04350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -26 REMARK 465 GLY A -25 REMARK 465 HIS A -24 REMARK 465 HIS A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 SER A -12 REMARK 465 SER A -11 REMARK 465 GLY A -10 REMARK 465 HIS A -9 REMARK 465 ILE A -8 REMARK 465 ASP A -7 REMARK 465 ASP A -6 REMARK 465 ASP A -5 REMARK 465 ASP A -4 REMARK 465 LYS A -3 REMARK 465 HIS A -2 REMARK 465 MET A -1 REMARK 465 LEU A 0 REMARK 465 GLU A 1 REMARK 465 MET A 2 REMARK 465 ILE A 3 REMARK 465 GLN A 4 REMARK 465 SER A 5 REMARK 465 HIS A 6 REMARK 465 THR A 342 REMARK 465 GLU A 343 REMARK 465 LYS A 344 REMARK 465 MET B -26 REMARK 465 GLY B -25 REMARK 465 HIS B -24 REMARK 465 HIS B -23 REMARK 465 HIS B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 SER B -12 REMARK 465 SER B -11 REMARK 465 GLY B -10 REMARK 465 HIS B -9 REMARK 465 ILE B -8 REMARK 465 ASP B -7 REMARK 465 ASP B -6 REMARK 465 ASP B -5 REMARK 465 ASP B -4 REMARK 465 LYS B -3 REMARK 465 HIS B -2 REMARK 465 MET B -1 REMARK 465 LEU B 0 REMARK 465 GLU B 1 REMARK 465 MET B 2 REMARK 465 ILE B 3 REMARK 465 GLN B 4 REMARK 465 SER B 5 REMARK 465 HIS B 6 REMARK 465 LYS B 344 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 192 CG CD1 CD2 REMARK 470 GLU B 343 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OAF 1EI A 401 O HOH A 742 1.78 REMARK 500 OG SER B 248 O HOH B 649 1.95 REMARK 500 O HOH B 705 O HOH B 815 2.00 REMARK 500 OG SER A 248 O HOH A 650 2.00 REMARK 500 O HOH B 732 O HOH B 814 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU A 69 O HOH B 709 1455 1.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 25 -99.84 -147.65 REMARK 500 PHE A 61 -98.65 61.94 REMARK 500 ASP A 93 -12.82 -147.79 REMARK 500 ALA A 118 -129.45 62.36 REMARK 500 TRP A 186 -73.97 -82.49 REMARK 500 ARG A 193 163.03 172.40 REMARK 500 SER A 310 -156.68 -167.72 REMARK 500 SER B 25 -100.62 -147.79 REMARK 500 PHE B 61 -98.24 61.35 REMARK 500 ASP B 93 -14.73 -147.05 REMARK 500 ALA B 118 -132.09 63.67 REMARK 500 SER B 310 -156.27 -167.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1EI A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1EI B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 407 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4IIX RELATED DB: PDB DBREF 4IIY A 2 344 UNP Q2KKH9 Q2KKH9_ECOLX 2 344 DBREF 4IIY B 2 344 UNP Q2KKH9 Q2KKH9_ECOLX 2 344 SEQADV 4IIY MET A -26 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY GLY A -25 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS A -24 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS A -23 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS A -22 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS A -21 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS A -20 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS A -19 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS A -18 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS A -17 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS A -16 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS A -15 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS A -14 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS A -13 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY SER A -12 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY SER A -11 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY GLY A -10 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS A -9 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY ILE A -8 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY ASP A -7 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY ASP A -6 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY ASP A -5 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY ASP A -4 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY LYS A -3 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS A -2 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY MET A -1 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY LEU A 0 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY GLU A 1 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY ALA A 118 UNP Q2KKH9 SER 118 ENGINEERED MUTATION SEQADV 4IIY MET B -26 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY GLY B -25 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS B -24 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS B -23 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS B -22 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS B -21 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS B -20 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS B -19 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS B -18 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS B -17 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS B -16 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS B -15 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS B -14 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS B -13 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY SER B -12 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY SER B -11 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY GLY B -10 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS B -9 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY ILE B -8 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY ASP B -7 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY ASP B -6 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY ASP B -5 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY ASP B -4 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY LYS B -3 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY HIS B -2 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY MET B -1 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY LEU B 0 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY GLU B 1 UNP Q2KKH9 EXPRESSION TAG SEQADV 4IIY ALA B 118 UNP Q2KKH9 SER 118 ENGINEERED MUTATION SEQRES 1 A 371 MET GLY HIS HIS HIS HIS HIS HIS HIS HIS HIS HIS HIS SEQRES 2 A 371 HIS SER SER GLY HIS ILE ASP ASP ASP ASP LYS HIS MET SEQRES 3 A 371 LEU GLU MET ILE GLN SER HIS PRO LEU LEU ALA ALA PRO SEQRES 4 A 371 LEU ALA VAL GLY ASP THR ILE GLY PHE PHE SER SER SER SEQRES 5 A 371 ALA PRO ALA THR VAL THR ALA LYS ASN ARG PHE PHE ARG SEQRES 6 A 371 GLY VAL GLU PHE LEU GLN ARG LYS GLY PHE LYS LEU VAL SEQRES 7 A 371 SER GLY LYS LEU THR GLY LYS THR ASP PHE TYR ARG SER SEQRES 8 A 371 GLY THR ILE LYS GLU ARG ALA GLN GLU PHE ASN GLU LEU SEQRES 9 A 371 VAL TYR ASN PRO ASP ILE THR CYS ILE MET SER THR ILE SEQRES 10 A 371 GLY GLY ASP ASN SER ASN SER LEU LEU PRO PHE LEU ASP SEQRES 11 A 371 TYR ASP ALA ILE ILE ALA ASN PRO LYS ILE ILE ILE GLY SEQRES 12 A 371 TYR ALA ASP THR THR ALA LEU LEU ALA GLY ILE TYR ALA SEQRES 13 A 371 LYS THR GLY LEU ILE THR PHE TYR GLY PRO ALA LEU ILE SEQRES 14 A 371 PRO SER PHE GLY GLU HIS PRO PRO LEU VAL ASP ILE THR SEQRES 15 A 371 TYR GLU SER PHE ILE LYS ILE LEU THR ARG LYS GLN SER SEQRES 16 A 371 GLY ILE TYR THR TYR THR LEU PRO GLU LYS TRP SER ASP SEQRES 17 A 371 GLU SER ILE ASN TRP ASN GLU ASN LYS ILE LEU ARG PRO SEQRES 18 A 371 LYS LYS LEU TYR LYS ASN ASN CYS ALA PHE TYR GLY SER SEQRES 19 A 371 GLY LYS VAL GLU GLY ARG VAL ILE GLY GLY ASN LEU ASN SEQRES 20 A 371 THR LEU THR GLY ILE TRP GLY SER GLU TRP MET PRO GLU SEQRES 21 A 371 ILE ARG ASN GLY ASP ILE LEU PHE ILE GLU ASP SER ARG SEQRES 22 A 371 LYS SER ILE ALA THR VAL GLU ARG LEU PHE SER MET LEU SEQRES 23 A 371 LYS LEU ASN ARG VAL PHE ASP LYS VAL SER ALA ILE ILE SEQRES 24 A 371 LEU GLY LYS HIS GLU LEU PHE ASP CYS ALA GLY SER LYS SEQRES 25 A 371 ARG ARG PRO TYR GLU VAL LEU THR GLU VAL LEU ASP GLY SEQRES 26 A 371 LYS GLN ILE PRO VAL LEU ASP GLY PHE ASP CYS SER HIS SEQRES 27 A 371 THR HIS PRO MET LEU THR LEU PRO LEU GLY VAL LYS LEU SEQRES 28 A 371 ALA ILE ASP PHE ASP ASN LYS ASN ILE SER ILE THR GLU SEQRES 29 A 371 GLN TYR LEU SER THR GLU LYS SEQRES 1 B 371 MET GLY HIS HIS HIS HIS HIS HIS HIS HIS HIS HIS HIS SEQRES 2 B 371 HIS SER SER GLY HIS ILE ASP ASP ASP ASP LYS HIS MET SEQRES 3 B 371 LEU GLU MET ILE GLN SER HIS PRO LEU LEU ALA ALA PRO SEQRES 4 B 371 LEU ALA VAL GLY ASP THR ILE GLY PHE PHE SER SER SER SEQRES 5 B 371 ALA PRO ALA THR VAL THR ALA LYS ASN ARG PHE PHE ARG SEQRES 6 B 371 GLY VAL GLU PHE LEU GLN ARG LYS GLY PHE LYS LEU VAL SEQRES 7 B 371 SER GLY LYS LEU THR GLY LYS THR ASP PHE TYR ARG SER SEQRES 8 B 371 GLY THR ILE LYS GLU ARG ALA GLN GLU PHE ASN GLU LEU SEQRES 9 B 371 VAL TYR ASN PRO ASP ILE THR CYS ILE MET SER THR ILE SEQRES 10 B 371 GLY GLY ASP ASN SER ASN SER LEU LEU PRO PHE LEU ASP SEQRES 11 B 371 TYR ASP ALA ILE ILE ALA ASN PRO LYS ILE ILE ILE GLY SEQRES 12 B 371 TYR ALA ASP THR THR ALA LEU LEU ALA GLY ILE TYR ALA SEQRES 13 B 371 LYS THR GLY LEU ILE THR PHE TYR GLY PRO ALA LEU ILE SEQRES 14 B 371 PRO SER PHE GLY GLU HIS PRO PRO LEU VAL ASP ILE THR SEQRES 15 B 371 TYR GLU SER PHE ILE LYS ILE LEU THR ARG LYS GLN SER SEQRES 16 B 371 GLY ILE TYR THR TYR THR LEU PRO GLU LYS TRP SER ASP SEQRES 17 B 371 GLU SER ILE ASN TRP ASN GLU ASN LYS ILE LEU ARG PRO SEQRES 18 B 371 LYS LYS LEU TYR LYS ASN ASN CYS ALA PHE TYR GLY SER SEQRES 19 B 371 GLY LYS VAL GLU GLY ARG VAL ILE GLY GLY ASN LEU ASN SEQRES 20 B 371 THR LEU THR GLY ILE TRP GLY SER GLU TRP MET PRO GLU SEQRES 21 B 371 ILE ARG ASN GLY ASP ILE LEU PHE ILE GLU ASP SER ARG SEQRES 22 B 371 LYS SER ILE ALA THR VAL GLU ARG LEU PHE SER MET LEU SEQRES 23 B 371 LYS LEU ASN ARG VAL PHE ASP LYS VAL SER ALA ILE ILE SEQRES 24 B 371 LEU GLY LYS HIS GLU LEU PHE ASP CYS ALA GLY SER LYS SEQRES 25 B 371 ARG ARG PRO TYR GLU VAL LEU THR GLU VAL LEU ASP GLY SEQRES 26 B 371 LYS GLN ILE PRO VAL LEU ASP GLY PHE ASP CYS SER HIS SEQRES 27 B 371 THR HIS PRO MET LEU THR LEU PRO LEU GLY VAL LYS LEU SEQRES 28 B 371 ALA ILE ASP PHE ASP ASN LYS ASN ILE SER ILE THR GLU SEQRES 29 B 371 GLN TYR LEU SER THR GLU LYS HET 1EI A 401 32 HET EDO A 402 4 HET EDO A 403 4 HET EDO A 404 4 HET EDO A 405 4 HET EDO A 406 4 HET EDO A 407 4 HET EDO A 408 4 HET 1EI B 401 32 HET EDO B 402 4 HET EDO B 403 4 HET EDO B 404 4 HET EDO B 405 4 HET EDO B 406 4 HET EDO B 407 4 HETNAM 1EI 5'-O-(L-ALPHA-GLUTAMYLSULFAMOYL)INOSINE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 1EI 2(C15 H20 N6 O10 S) FORMUL 4 EDO 13(C2 H6 O2) FORMUL 18 HOH *618(H2 O) HELIX 1 1 PRO A 27 ALA A 32 1 6 HELIX 2 2 ALA A 32 LYS A 46 1 15 HELIX 3 3 THR A 66 ASN A 80 1 15 HELIX 4 4 ASN A 94 LEU A 102 5 9 HELIX 5 5 ASP A 103 ASN A 110 1 8 HELIX 6 6 TYR A 117 ASP A 119 5 3 HELIX 7 7 THR A 120 GLY A 132 1 13 HELIX 8 8 ALA A 140 GLY A 146 1 7 HELIX 9 9 PRO A 150 ARG A 165 1 16 HELIX 10 10 LEU A 219 THR A 223 1 5 HELIX 11 11 SER A 248 ASN A 262 1 15 HELIX 12 12 ARG A 263 LYS A 267 5 5 HELIX 13 13 ARG A 287 ASP A 297 1 11 HELIX 14 14 PRO B 27 ALA B 32 1 6 HELIX 15 15 ALA B 32 LYS B 46 1 15 HELIX 16 16 THR B 66 TYR B 79 1 14 HELIX 17 17 ASN B 94 LEU B 102 5 9 HELIX 18 18 ASP B 103 ASN B 110 1 8 HELIX 19 19 TYR B 117 ASP B 119 5 3 HELIX 20 20 THR B 120 GLY B 132 1 13 HELIX 21 21 ALA B 140 GLY B 146 1 7 HELIX 22 22 PRO B 150 ARG B 165 1 16 HELIX 23 23 LEU B 219 THR B 223 1 5 HELIX 24 24 SER B 248 ASN B 262 1 15 HELIX 25 25 ARG B 263 VAL B 268 1 6 HELIX 26 26 ARG B 287 ASP B 297 1 11 SHEET 1 A 6 LYS A 49 SER A 52 0 SHEET 2 A 6 THR A 18 PHE A 22 1 N ILE A 19 O LYS A 49 SHEET 3 A 6 ILE A 83 SER A 88 1 O MET A 87 N GLY A 20 SHEET 4 A 6 ILE A 113 GLY A 116 1 O ILE A 113 N ILE A 86 SHEET 5 A 6 THR A 135 TYR A 137 1 O PHE A 136 N ILE A 114 SHEET 6 A 6 LEU A 318 LEU A 320 -1 O LEU A 318 N TYR A 137 SHEET 1 B 8 TYR A 171 THR A 172 0 SHEET 2 B 8 ASN A 332 ILE A 335 -1 O ILE A 335 N TYR A 171 SHEET 3 B 8 LYS A 323 ASP A 327 -1 N ALA A 325 O SER A 334 SHEET 4 B 8 LYS A 209 ASN A 218 -1 N VAL A 210 O ILE A 326 SHEET 5 B 8 ILE A 239 GLU A 243 1 O PHE A 241 N ILE A 215 SHEET 6 B 8 ALA A 270 GLY A 274 1 O ILE A 272 N LEU A 240 SHEET 7 B 8 VAL A 303 PHE A 307 1 O LEU A 304 N LEU A 273 SHEET 8 B 8 ALA A 203 TYR A 205 -1 N TYR A 205 O VAL A 303 SHEET 1 C 2 LYS A 178 TRP A 179 0 SHEET 2 C 2 TYR A 198 LYS A 199 -1 O TYR A 198 N TRP A 179 SHEET 1 D 6 LYS B 49 SER B 52 0 SHEET 2 D 6 THR B 18 PHE B 22 1 N ILE B 19 O LYS B 49 SHEET 3 D 6 ILE B 83 SER B 88 1 O MET B 87 N GLY B 20 SHEET 4 D 6 ILE B 113 GLY B 116 1 O ILE B 113 N ILE B 86 SHEET 5 D 6 THR B 135 TYR B 137 1 O PHE B 136 N ILE B 114 SHEET 6 D 6 LEU B 318 LEU B 320 -1 O LEU B 318 N TYR B 137 SHEET 1 E 8 TYR B 171 THR B 172 0 SHEET 2 E 8 ASN B 332 ILE B 335 -1 O ILE B 335 N TYR B 171 SHEET 3 E 8 LYS B 323 ASP B 327 -1 N ALA B 325 O SER B 334 SHEET 4 E 8 LYS B 209 ASN B 218 -1 N VAL B 210 O ILE B 326 SHEET 5 E 8 ILE B 239 GLU B 243 1 O ILE B 239 N ARG B 213 SHEET 6 E 8 ALA B 270 GLY B 274 1 O ILE B 272 N LEU B 240 SHEET 7 E 8 VAL B 303 PHE B 307 1 O LEU B 304 N LEU B 273 SHEET 8 E 8 ALA B 203 TYR B 205 -1 N TYR B 205 O VAL B 303 SHEET 1 F 2 LYS B 178 TRP B 179 0 SHEET 2 F 2 TYR B 198 LYS B 199 -1 O TYR B 198 N TRP B 179 CISPEP 1 PRO A 149 PRO A 150 0 8.48 CISPEP 2 HIS A 313 PRO A 314 0 -1.23 CISPEP 3 PRO B 149 PRO B 150 0 9.12 CISPEP 4 HIS B 313 PRO B 314 0 -1.52 SITE 1 AC1 21 ILE A 90 GLY A 91 GLY A 92 ASP A 119 SITE 2 AC1 21 SER A 183 TRP A 186 ASN A 218 ASN A 220 SITE 3 AC1 21 THR A 221 ARG A 246 LYS A 247 GLU A 277 SITE 4 AC1 21 HIS A 311 EDO A 408 HOH A 511 HOH A 512 SITE 5 AC1 21 HOH A 600 HOH A 605 HOH A 686 HOH A 742 SITE 6 AC1 21 HOH A 794 SITE 1 AC2 1 LYS A 260 SITE 1 AC3 6 TRP A 226 GLU A 233 ILE A 234 LYS A 267 SITE 2 AC3 6 HOH A 597 HOH A 676 SITE 1 AC4 6 LYS A 161 ARG A 165 SER A 168 ILE A 170 SITE 2 AC4 6 ASP B 329 ASN B 330 SITE 1 AC5 6 ARG A 165 GLN A 167 GLY A 169 TYR A 171 SITE 2 AC5 6 ILE A 335 GLU A 337 SITE 1 AC6 6 GLU A 243 ASP A 244 GLY A 274 HIS A 276 SITE 2 AC6 6 PRO A 288 HOH A 534 SITE 1 AC7 4 VAL A 78 ALA A 106 ALA A 109 ASN A 110 SITE 1 AC8 4 GLY A 92 ASP A 93 1EI A 401 HOH A 742 SITE 1 AC9 17 ILE B 90 GLY B 91 GLY B 92 TYR B 117 SITE 2 AC9 17 ASP B 119 SER B 183 TRP B 186 ASN B 220 SITE 3 AC9 17 ARG B 246 LYS B 247 GLU B 277 HIS B 311 SITE 4 AC9 17 HOH B 505 HOH B 507 HOH B 543 HOH B 616 SITE 5 AC9 17 HOH B 724 SITE 1 BC1 6 GLU B 243 ASP B 244 GLY B 274 HIS B 276 SITE 2 BC1 6 PRO B 288 HOH B 539 SITE 1 BC2 5 TRP B 226 GLU B 233 ILE B 234 HOH B 580 SITE 2 BC2 5 HOH B 701 SITE 1 BC3 3 TRP A 230 LYS B 260 ARG B 263 SITE 1 BC4 8 ASP A 329 ASN A 330 HOH A 761 LYS B 161 SITE 2 BC4 8 ARG B 165 SER B 168 ILE B 170 HOH B 815 SITE 1 BC5 3 PRO B 12 ALA B 14 ASP B 17 SITE 1 BC6 9 ARG B 165 GLN B 167 GLY B 169 ILE B 170 SITE 2 BC6 9 TYR B 171 ILE B 335 GLU B 337 GLN B 338 SITE 3 BC6 9 TYR B 339 CRYST1 54.525 86.087 73.225 90.00 101.19 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018340 0.000000 0.003629 0.00000 SCALE2 0.000000 0.011616 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013921 0.00000