HEADER HYDROLASE 21-DEC-12 4IJ6
TITLE CRYSTAL STRUCTURE OF A NOVEL-TYPE PHOSPHOSERINE PHOSPHATASE MUTANT
TITLE 2 (H9A) FROM HYDROGENOBACTER THERMOPHILUS TK-6 IN COMPLEX WITH
TITLE 3 L-PHOSPHOSERINE
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: PHOSPHOSERINE PHOSPHATASE 1;
COMPND 3 CHAIN: A, B;
COMPND 4 SYNONYM: PSP 1, PSPASE 1, METAL-INDEPENDENT PHOSPHOSERINE PHOSPHATASE
COMPND 5 1, IPSP1, O-PHOSPHOSERINE PHOSPHOHYDROLASE 1;
COMPND 6 EC: 3.1.3.3;
COMPND 7 ENGINEERED: YES;
COMPND 8 MUTATION: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HYDROGENOBACTER THERMOPHILUS;
SOURCE 3 ORGANISM_TAXID: 608538;
SOURCE 4 STRAIN: DSM 6534 / IAM 12695 / TK-6;
SOURCE 5 GENE: PSPA, PGMA, HTH_0103, HYDTH_0104;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS PHOSPHATASE, HYDROLASE
EXPDTA X-RAY DIFFRACTION
AUTHOR Y.CHIBA,S.HORITA,J.OHTSUKA,H.ARAI,K.NAGATA,Y.IGARASHI,M.TANOKURA,
AUTHOR 2 M.ISHII
REVDAT 4 20-NOV-24 4IJ6 1 REMARK
REVDAT 3 08-NOV-23 4IJ6 1 REMARK SEQADV
REVDAT 2 10-JUL-13 4IJ6 1 JRNL
REVDAT 1 20-MAR-13 4IJ6 0
JRNL AUTH Y.CHIBA,S.HORITA,J.OHTSUKA,H.ARAI,K.NAGATA,Y.IGARASHI,
JRNL AUTH 2 M.TANOKURA,M.ISHII
JRNL TITL STRUCTURAL UNITS IMPORTANT FOR ACTIVITY OF A NOVEL-TYPE
JRNL TITL 2 PHOSPHOSERINE PHOSPHATASE FROM HYDROGENOBACTER THERMOPHILUS
JRNL TITL 3 TK-6 REVEALED BY CRYSTAL STRUCTURE ANALYSIS
JRNL REF J.BIOL.CHEM. V. 288 11448 2013
JRNL REFN ISSN 0021-9258
JRNL PMID 23479726
JRNL DOI 10.1074/JBC.M112.449561
REMARK 2
REMARK 2 RESOLUTION. 1.80 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC 5.7.0029
REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,
REMARK 3 : NICHOLLS,WINN,LONG,VAGIN
REMARK 3
REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.15
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4
REMARK 3 NUMBER OF REFLECTIONS : 39565
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.192
REMARK 3 R VALUE (WORKING SET) : 0.190
REMARK 3 FREE R VALUE : 0.218
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000
REMARK 3 FREE R VALUE TEST SET COUNT : 1989
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85
REMARK 3 REFLECTION IN BIN (WORKING SET) : 2632
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.46
REMARK 3 BIN R VALUE (WORKING SET) : 0.2050
REMARK 3 BIN FREE R VALUE SET COUNT : 141
REMARK 3 BIN FREE R VALUE : 0.2290
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 3347
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 52
REMARK 3 SOLVENT ATOMS : 147
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.56
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : 0.37000
REMARK 3 B22 (A**2) : 0.43000
REMARK 3 B33 (A**2) : -0.80000
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): 0.137
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.123
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.076
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.726
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3484 ; 0.005 ; 0.019
REMARK 3 BOND LENGTHS OTHERS (A): 3389 ; 0.001 ; 0.020
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4700 ; 1.099 ; 1.965
REMARK 3 BOND ANGLES OTHERS (DEGREES): 7788 ; 0.682 ; 3.001
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 418 ; 5.770 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 166 ;35.674 ;23.554
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 641 ;11.420 ;15.000
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;13.424 ;15.000
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 513 ; 0.061 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3835 ; 0.004 ; 0.020
REMARK 3 GENERAL PLANES OTHERS (A): 797 ; 0.001 ; 0.020
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 2
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 1 A 207
REMARK 3 ORIGIN FOR THE GROUP (A): 16.9207 3.5459 29.4144
REMARK 3 T TENSOR
REMARK 3 T11: 0.0087 T22: 0.0051
REMARK 3 T33: 0.0800 T12: -0.0054
REMARK 3 T13: 0.0062 T23: -0.0113
REMARK 3 L TENSOR
REMARK 3 L11: 1.0057 L22: 0.4792
REMARK 3 L33: 1.2067 L12: 0.0355
REMARK 3 L13: -0.2717 L23: 0.0061
REMARK 3 S TENSOR
REMARK 3 S11: 0.0338 S12: -0.0392 S13: 0.0104
REMARK 3 S21: 0.0166 S22: -0.0088 S23: -0.0323
REMARK 3 S31: 0.0100 S32: 0.0267 S33: -0.0250
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : B 1 B 203
REMARK 3 ORIGIN FOR THE GROUP (A): 7.6984 0.1164 3.2731
REMARK 3 T TENSOR
REMARK 3 T11: 0.0135 T22: 0.0027
REMARK 3 T33: 0.0825 T12: -0.0033
REMARK 3 T13: -0.0018 T23: -0.0081
REMARK 3 L TENSOR
REMARK 3 L11: 0.6170 L22: 0.3269
REMARK 3 L33: 1.3106 L12: 0.1755
REMARK 3 L13: -0.2437 L23: 0.0868
REMARK 3 S TENSOR
REMARK 3 S11: -0.0070 S12: 0.0069 S13: 0.0428
REMARK 3 S21: -0.0000 S22: 0.0086 S23: 0.0271
REMARK 3 S31: 0.0308 S32: -0.0320 S33: -0.0016
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : MASK
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.20
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 4IJ6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-JAN-13.
REMARK 100 THE DEPOSITION ID IS D_1000076818.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 11-FEB-12
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 4.6
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : PHOTON FACTORY
REMARK 200 BEAMLINE : AR-NE3A
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : XDS
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39566
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800
REMARK 200 RESOLUTION RANGE LOW (A) : 38.200
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : NULL
REMARK 200 DATA REDUNDANCY : NULL
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : NULL
REMARK 200 FOR THE DATA SET : NULL
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: NULL
REMARK 200 STARTING MODEL: 4IJ5
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 42.54
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM SODIUM ACETATE TRIHYDRATE, 20
REMARK 280 MM CALCIUM CHLORIDE DIHYDRATE, AND 30% (V/V)-2-METHYL-2,4-
REMARK 280 PENTANEDIOL, PH 4.6, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE
REMARK 280 293K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X+1/2,-Y,Z+1/2
REMARK 290 3555 -X,Y+1/2,-Z+1/2
REMARK 290 4555 X+1/2,-Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.66500
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.77500
REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.46000
REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.77500
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.66500
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.46000
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 3750 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 17180 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 HIS A 208
REMARK 465 LYS A 209
REMARK 465 ALA A 210
REMARK 465 ILE A 211
REMARK 465 TYR B 204
REMARK 465 VAL B 205
REMARK 465 GLU B 206
REMARK 465 ALA B 207
REMARK 465 HIS B 208
REMARK 465 LYS B 209
REMARK 465 ALA B 210
REMARK 465 ILE B 211
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 SER A 149 -159.02 -147.73
REMARK 500 CYS A 174 82.38 -159.05
REMARK 500 GLU A 206 -78.46 -77.53
REMARK 500 SER B 149 -159.02 -145.22
REMARK 500 CYS B 174 78.72 -155.78
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SEP A 301
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 302
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 303
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 304
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SEP B 301
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 302
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 303
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC8
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 304
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC9
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 305
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 306
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 307
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 4IJ5 RELATED DB: PDB
DBREF 4IJ6 A 1 211 UNP D3DFG8 PSPA_HYDTT 1 211
DBREF 4IJ6 B 1 211 UNP D3DFG8 PSPA_HYDTT 1 211
SEQADV 4IJ6 ALA A 9 UNP D3DFG8 HIS 9 ENGINEERED MUTATION
SEQADV 4IJ6 ALA B 9 UNP D3DFG8 HIS 9 ENGINEERED MUTATION
SEQRES 1 A 211 MET VAL LYS LEU ILE LEU VAL ARG ALA ALA GLU SER GLU
SEQRES 2 A 211 TRP ASN PRO VAL GLY ARG TYR GLN GLY LEU LEU ASP PRO
SEQRES 3 A 211 ASP LEU SER GLU ARG GLY LYS LYS GLN ALA LYS LEU LEU
SEQRES 4 A 211 ALA GLN GLU LEU SER ARG GLU HIS LEU ASP VAL ILE TYR
SEQRES 5 A 211 SER SER PRO LEU LYS ARG THR TYR LEU THR ALA LEU GLU
SEQRES 6 A 211 ILE ALA GLU ALA LYS ASN LEU GLU VAL ILE LYS GLU ASP
SEQRES 7 A 211 ARG ILE ILE GLU ILE ASP HIS GLY MET TRP SER GLY MET
SEQRES 8 A 211 LEU VAL GLU GLU VAL MET GLU LYS TYR PRO GLU ASP PHE
SEQRES 9 A 211 ARG ARG TRP VAL GLU GLU PRO HIS LYS VAL GLU PHE GLN
SEQRES 10 A 211 GLY GLY GLU SER LEU ALA SER VAL TYR ASN ARG VAL LYS
SEQRES 11 A 211 GLY PHE LEU GLU GLU VAL ARG LYS ARG HIS TRP ASN GLN
SEQRES 12 A 211 THR VAL VAL VAL VAL SER HIS THR VAL PRO MET ARG ALA
SEQRES 13 A 211 MET TYR CYS ALA LEU LEU GLY VAL ASP LEU SER LYS PHE
SEQRES 14 A 211 TRP SER PHE GLY CYS ASP ASN ALA SER TYR SER VAL ILE
SEQRES 15 A 211 HIS MET GLU GLU ARG ARG ASN VAL ILE LEU LYS LEU ASN
SEQRES 16 A 211 ILE THR CYS HIS LEU GLY GLU PHE TYR VAL GLU ALA HIS
SEQRES 17 A 211 LYS ALA ILE
SEQRES 1 B 211 MET VAL LYS LEU ILE LEU VAL ARG ALA ALA GLU SER GLU
SEQRES 2 B 211 TRP ASN PRO VAL GLY ARG TYR GLN GLY LEU LEU ASP PRO
SEQRES 3 B 211 ASP LEU SER GLU ARG GLY LYS LYS GLN ALA LYS LEU LEU
SEQRES 4 B 211 ALA GLN GLU LEU SER ARG GLU HIS LEU ASP VAL ILE TYR
SEQRES 5 B 211 SER SER PRO LEU LYS ARG THR TYR LEU THR ALA LEU GLU
SEQRES 6 B 211 ILE ALA GLU ALA LYS ASN LEU GLU VAL ILE LYS GLU ASP
SEQRES 7 B 211 ARG ILE ILE GLU ILE ASP HIS GLY MET TRP SER GLY MET
SEQRES 8 B 211 LEU VAL GLU GLU VAL MET GLU LYS TYR PRO GLU ASP PHE
SEQRES 9 B 211 ARG ARG TRP VAL GLU GLU PRO HIS LYS VAL GLU PHE GLN
SEQRES 10 B 211 GLY GLY GLU SER LEU ALA SER VAL TYR ASN ARG VAL LYS
SEQRES 11 B 211 GLY PHE LEU GLU GLU VAL ARG LYS ARG HIS TRP ASN GLN
SEQRES 12 B 211 THR VAL VAL VAL VAL SER HIS THR VAL PRO MET ARG ALA
SEQRES 13 B 211 MET TYR CYS ALA LEU LEU GLY VAL ASP LEU SER LYS PHE
SEQRES 14 B 211 TRP SER PHE GLY CYS ASP ASN ALA SER TYR SER VAL ILE
SEQRES 15 B 211 HIS MET GLU GLU ARG ARG ASN VAL ILE LEU LYS LEU ASN
SEQRES 16 B 211 ILE THR CYS HIS LEU GLY GLU PHE TYR VAL GLU ALA HIS
SEQRES 17 B 211 LYS ALA ILE
HET SEP A 301 11
HET CL A 302 1
HET EDO A 303 4
HET EDO A 304 4
HET SEP B 301 11
HET CL B 302 1
HET EDO B 303 4
HET EDO B 304 4
HET EDO B 305 4
HET EDO B 306 4
HET EDO B 307 4
HETNAM SEP PHOSPHOSERINE
HETNAM CL CHLORIDE ION
HETNAM EDO 1,2-ETHANEDIOL
HETSYN SEP PHOSPHONOSERINE
HETSYN EDO ETHYLENE GLYCOL
FORMUL 3 SEP 2(C3 H8 N O6 P)
FORMUL 4 CL 2(CL 1-)
FORMUL 5 EDO 7(C2 H6 O2)
FORMUL 14 HOH *147(H2 O)
HELIX 1 1 SER A 29 SER A 44 1 16
HELIX 2 2 LEU A 56 LYS A 70 1 15
HELIX 3 3 ASP A 78 ILE A 81 5 4
HELIX 4 4 HIS A 85 SER A 89 5 5
HELIX 5 5 LEU A 92 TYR A 100 1 9
HELIX 6 6 TYR A 100 GLU A 110 1 11
HELIX 7 7 PRO A 111 VAL A 114 5 4
HELIX 8 8 SER A 121 HIS A 140 1 20
HELIX 9 9 HIS A 150 GLY A 163 1 14
HELIX 10 10 ASP A 165 PHE A 172 5 8
HELIX 11 11 THR A 197 TYR A 204 5 8
HELIX 12 12 SER B 29 SER B 44 1 16
HELIX 13 13 LEU B 56 ASN B 71 1 16
HELIX 14 14 ASP B 78 ILE B 81 5 4
HELIX 15 15 HIS B 85 SER B 89 5 5
HELIX 16 16 LEU B 92 TYR B 100 1 9
HELIX 17 17 TYR B 100 GLU B 110 1 11
HELIX 18 18 PRO B 111 VAL B 114 5 4
HELIX 19 19 SER B 121 HIS B 140 1 20
HELIX 20 20 HIS B 150 GLY B 163 1 14
HELIX 21 21 ASP B 165 PHE B 172 5 8
HELIX 22 22 THR B 197 GLY B 201 5 5
SHEET 1 A 6 VAL A 74 LYS A 76 0
SHEET 2 A 6 VAL A 50 SER A 53 1 N ILE A 51 O ILE A 75
SHEET 3 A 6 THR A 144 SER A 149 1 O VAL A 146 N TYR A 52
SHEET 4 A 6 VAL A 2 ARG A 8 1 N ILE A 5 O VAL A 145
SHEET 5 A 6 TYR A 179 MET A 184 -1 O ILE A 182 N LEU A 4
SHEET 6 A 6 ASN A 189 ILE A 196 -1 O ILE A 196 N TYR A 179
SHEET 1 B 6 VAL B 74 LYS B 76 0
SHEET 2 B 6 VAL B 50 SER B 53 1 N ILE B 51 O ILE B 75
SHEET 3 B 6 THR B 144 SER B 149 1 O VAL B 146 N TYR B 52
SHEET 4 B 6 VAL B 2 ARG B 8 1 N ILE B 5 O VAL B 145
SHEET 5 B 6 TYR B 179 MET B 184 -1 O ILE B 182 N LEU B 4
SHEET 6 B 6 ASN B 189 ILE B 196 -1 O ILE B 196 N TYR B 179
SSBOND 1 CYS A 198 CYS B 198 1555 1555 2.03
SITE 1 AC1 12 ARG A 8 ASN A 15 GLN A 21 GLY A 22
SITE 2 AC1 12 ARG A 58 GLU A 82 HIS A 85 HIS A 150
SITE 3 AC1 12 THR A 151 CL A 302 HOH A 406 HOH A 419
SITE 1 AC2 1 SEP A 301
SITE 1 AC3 6 SER A 29 GLU A 30 HOH A 416 HOH A 423
SITE 2 AC3 6 MET B 87 GLY B 118
SITE 1 AC4 2 ALA A 160 ASN A 189
SITE 1 AC5 13 ARG B 8 ASN B 15 TYR B 20 GLN B 21
SITE 2 AC5 13 GLY B 22 ARG B 58 GLU B 82 HIS B 85
SITE 3 AC5 13 HIS B 150 THR B 151 CL B 302 HOH B 403
SITE 4 AC5 13 HOH B 406
SITE 1 AC6 2 SEP B 301 HOH B 414
SITE 1 AC7 2 LYS B 130 ASN B 189
SITE 1 AC8 5 ASP B 49 VAL B 50 ILE B 51 LEU B 72
SITE 2 AC8 5 GLU B 73
SITE 1 AC9 5 SER A 89 MET A 91 HOH A 446 TRP B 14
SITE 2 AC9 5 ARG B 19
SITE 1 BC1 8 GLU A 13 TRP A 14 VAL A 17 ARG A 19
SITE 2 BC1 8 MET B 87 SER B 89 MET B 91 HOH B 422
SITE 1 BC2 5 ASP B 103 ARG B 106 VAL B 114 GLU B 115
SITE 2 BC2 5 HOH B 426
CRYST1 49.330 68.920 123.550 90.00 90.00 90.00 P 21 21 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.020272 0.000000 0.000000 0.00000
SCALE2 0.000000 0.014510 0.000000 0.00000
SCALE3 0.000000 0.000000 0.008094 0.00000