HEADER FLUORESCENT PROTEIN 25-DEC-12 4IK3 TITLE HIGH RESOLUTION STRUCTURE OF GCAMP3 AT PH 8.5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RCAMP, GREEN FLUORESCENT PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 OTHER_DETAILS: CHIMERA OF 10 EXPRESSION TAGS, RESIDUES 11-58 OF COMPND 7 RCAMP, LINKER LE, RESIDUES 61-150 OF GREEN FLUORESCENT PROTEIN, COMPND 8 LINKER GGTGGSMV, RESIDUES 159-299 OF GREEN FLUORESCENT PROTEIN, COMPND 9 RESIDUES 300-448 OF RCAMP SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTACMAEA QUADRICOLOR, AEQUOREA VICTORIA; SOURCE 3 ORGANISM_COMMON: BUBBLE-TIP ANEMONE, JELLYFISH; SOURCE 4 ORGANISM_TAXID: 6118, 6100; SOURCE 5 GENE: GFP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CALCIUM INDICATOR, MUTANTS, FLUORESCENT INTENSITY, DIMERIZATION, BETA KEYWDS 2 BARREL, CALMODULIN, FLUORESCENT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.CHEN,X.SONG,L.MIAO,Y.ZHU,G.JI REVDAT 2 21-JUN-17 4IK3 1 SEQADV REVDAT 1 29-JAN-14 4IK3 0 JRNL AUTH Y.CHEN,X.SONG,S.YE,L.MIAO,Y.ZHU,R.G.ZHANG,G.JI JRNL TITL STRUCTURAL INSIGHT INTO ENHANCED CALCIUM INDICATOR GCAMP3 JRNL TITL 2 AND GCAMPJ TO PROMOTE FURTHER IMPROVEMENT. JRNL REF PROTEIN CELL V. 4 299 2013 JRNL REFN ISSN 1674-800X JRNL PMID 23549615 JRNL DOI 10.1007/S13238-013-2103-4 REMARK 2 REMARK 2 RESOLUTION. 2.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.01 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.220 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 3 NUMBER OF REFLECTIONS : 25346 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 1286 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.0144 - 4.1710 0.99 2840 171 0.1809 0.1947 REMARK 3 2 4.1710 - 3.3118 0.98 2720 172 0.1697 0.1826 REMARK 3 3 3.3118 - 2.8935 0.97 2746 132 0.1915 0.2427 REMARK 3 4 2.8935 - 2.6291 0.97 2707 145 0.2029 0.2633 REMARK 3 5 2.6291 - 2.4408 0.96 2669 124 0.1873 0.2429 REMARK 3 6 2.4408 - 2.2969 0.95 2661 121 0.1822 0.2014 REMARK 3 7 2.2969 - 2.1819 0.94 2619 145 0.1879 0.2166 REMARK 3 8 2.1819 - 2.0870 0.94 2612 139 0.1959 0.2684 REMARK 3 9 2.0870 - 2.0066 0.90 2486 137 0.2082 0.2645 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.86 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 39.99 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.720 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.47280 REMARK 3 B22 (A**2) : -0.25230 REMARK 3 B33 (A**2) : -0.22050 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.25710 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3254 REMARK 3 ANGLE : 0.966 4415 REMARK 3 CHIRALITY : 0.068 471 REMARK 3 PLANARITY : 0.004 576 REMARK 3 DIHEDRAL : 16.038 1228 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 38:55) REMARK 3 ORIGIN FOR THE GROUP (A): 40.0609 37.0247 45.8669 REMARK 3 T TENSOR REMARK 3 T11: 0.1826 T22: 0.3555 REMARK 3 T33: 0.2404 T12: 0.0352 REMARK 3 T13: -0.0098 T23: 0.0008 REMARK 3 L TENSOR REMARK 3 L11: 0.2799 L22: 0.0254 REMARK 3 L33: 0.0101 L12: -0.0960 REMARK 3 L13: 0.0563 L23: -0.0261 REMARK 3 S TENSOR REMARK 3 S11: -0.0413 S12: -0.3780 S13: -0.1041 REMARK 3 S21: 0.0473 S22: 0.1727 S23: -0.2207 REMARK 3 S31: 0.0833 S32: 0.4543 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 56:237) REMARK 3 ORIGIN FOR THE GROUP (A): 46.6116 25.9047 11.7733 REMARK 3 T TENSOR REMARK 3 T11: 0.1176 T22: 0.0867 REMARK 3 T33: 0.0983 T12: -0.0246 REMARK 3 T13: 0.0055 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 0.7760 L22: 0.8375 REMARK 3 L33: 0.7642 L12: -0.6145 REMARK 3 L13: 0.0810 L23: -0.4460 REMARK 3 S TENSOR REMARK 3 S11: 0.0929 S12: -0.0257 S13: -0.0207 REMARK 3 S21: -0.0271 S22: -0.0294 S23: 0.0054 REMARK 3 S31: -0.0349 S32: 0.0154 S33: -0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 238:306) REMARK 3 ORIGIN FOR THE GROUP (A): 40.4291 28.0800 9.2276 REMARK 3 T TENSOR REMARK 3 T11: 0.1204 T22: 0.0973 REMARK 3 T33: 0.1273 T12: -0.0167 REMARK 3 T13: 0.0020 T23: -0.0019 REMARK 3 L TENSOR REMARK 3 L11: 1.0901 L22: 0.5784 REMARK 3 L33: 0.6387 L12: -0.5365 REMARK 3 L13: -0.2324 L23: -0.1874 REMARK 3 S TENSOR REMARK 3 S11: 0.0514 S12: 0.1407 S13: 0.0986 REMARK 3 S21: -0.0158 S22: 0.0171 S23: -0.0484 REMARK 3 S31: -0.0733 S32: -0.0811 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 307:378) REMARK 3 ORIGIN FOR THE GROUP (A): 69.5555 25.4501 25.6490 REMARK 3 T TENSOR REMARK 3 T11: 0.1652 T22: 0.1980 REMARK 3 T33: 0.1890 T12: -0.0290 REMARK 3 T13: -0.0163 T23: 0.0189 REMARK 3 L TENSOR REMARK 3 L11: 0.7284 L22: 0.4383 REMARK 3 L33: 0.4758 L12: 0.1156 REMARK 3 L13: 0.2459 L23: -0.2371 REMARK 3 S TENSOR REMARK 3 S11: 0.0403 S12: -0.0708 S13: 0.0510 REMARK 3 S21: 0.1219 S22: -0.0187 S23: 0.0883 REMARK 3 S31: 0.0689 S32: 0.1044 S33: -0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 379:447) REMARK 3 ORIGIN FOR THE GROUP (A): 82.7864 41.6944 23.5851 REMARK 3 T TENSOR REMARK 3 T11: 0.2302 T22: 0.2424 REMARK 3 T33: 0.2010 T12: -0.0492 REMARK 3 T13: -0.0225 T23: 0.0018 REMARK 3 L TENSOR REMARK 3 L11: 0.7198 L22: 0.8827 REMARK 3 L33: 0.3019 L12: 0.8316 REMARK 3 L13: 0.0970 L23: -0.0787 REMARK 3 S TENSOR REMARK 3 S11: 0.1244 S12: -0.0649 S13: -0.0503 REMARK 3 S21: 0.1403 S22: -0.0750 S23: -0.0297 REMARK 3 S31: -0.0718 S32: -0.0394 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4IK3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1000076851. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-FEB-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : BE FILTER REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25387 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 31.011 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.04 REMARK 200 COMPLETENESS FOR SHELL (%) : 68.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS PH 8.5, (NH4)2SO4, 23% PEG 3350, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 62.99650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.30700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 62.99650 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 23.30700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -156.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 113.97726 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 67.52425 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 GLY A 10 REMARK 465 MET A 11 REMARK 465 ALA A 12 REMARK 465 SER A 13 REMARK 465 MET A 14 REMARK 465 THR A 15 REMARK 465 GLY A 16 REMARK 465 GLY A 17 REMARK 465 GLN A 18 REMARK 465 GLN A 19 REMARK 465 MET A 20 REMARK 465 GLY A 21 REMARK 465 ARG A 22 REMARK 465 ASP A 23 REMARK 465 LEU A 24 REMARK 465 TYR A 25 REMARK 465 ASP A 26 REMARK 465 ASP A 27 REMARK 465 ASP A 28 REMARK 465 ASP A 29 REMARK 465 LYS A 30 REMARK 465 ASP A 31 REMARK 465 LEU A 32 REMARK 465 ALA A 33 REMARK 465 THR A 34 REMARK 465 MET A 35 REMARK 465 VAL A 36 REMARK 465 ASP A 37 REMARK 465 GLY A 144 REMARK 465 MET A 145 REMARK 465 ASP A 146 REMARK 465 GLU A 147 REMARK 465 LEU A 148 REMARK 465 TYR A 149 REMARK 465 LYS A 150 REMARK 465 GLY A 151 REMARK 465 GLY A 152 REMARK 465 THR A 153 REMARK 465 GLY A 154 REMARK 465 GLY A 155 REMARK 465 SER A 156 REMARK 465 MET A 157 REMARK 465 VAL A 158 REMARK 465 ALA A 449 REMARK 465 LYS A 450 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 38 OG REMARK 470 LEU A 143 CG CD1 CD2 REMARK 470 GLN A 305 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU A 84 O HOH A 824 1.93 REMARK 500 OD1 ASN A 355 O HOH A 708 1.95 REMARK 500 O HOH A 818 O HOH A 838 2.14 REMARK 500 O HOH A 660 O HOH A 752 2.16 REMARK 500 OE2 GLU A 247 O HOH A 763 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 59 108.22 -51.75 REMARK 500 ASP A 304 -145.30 -106.33 REMARK 500 GLU A 308 -44.53 -28.07 REMARK 500 MET A 378 121.06 68.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 502 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 358 OD1 REMARK 620 2 ASP A 360 OD1 86.5 REMARK 620 3 ASP A 362 OD1 97.5 80.4 REMARK 620 4 THR A 364 O 89.1 155.4 76.2 REMARK 620 5 GLU A 369 OE2 84.9 79.1 159.1 124.7 REMARK 620 6 GLU A 369 OE1 109.1 128.0 140.9 76.2 54.7 REMARK 620 7 HOH A 603 O 163.7 77.3 80.6 106.0 91.3 81.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 504 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 431 OD1 REMARK 620 2 ASP A 433 OD1 85.0 REMARK 620 3 GLN A 437 O 84.6 158.0 REMARK 620 4 ASP A 435 OD1 86.0 81.9 78.1 REMARK 620 5 GLU A 442 OE1 111.6 122.9 79.0 149.4 REMARK 620 6 GLU A 442 OE2 97.3 71.3 129.3 152.6 53.1 REMARK 620 7 HOH A 609 O 160.6 86.5 97.2 75.6 87.6 96.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 503 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 401 O REMARK 620 2 ASP A 395 OD1 91.6 REMARK 620 3 ASP A 397 OD1 153.9 81.7 REMARK 620 4 GLU A 406 OE2 131.4 99.5 74.6 REMARK 620 5 ASN A 399 OD1 78.5 85.7 75.9 149.0 REMARK 620 6 GLU A 406 OE1 77.1 106.3 129.0 54.4 152.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 328 O REMARK 620 2 ASP A 322 OD1 88.0 REMARK 620 3 GLU A 333 OE1 78.7 109.5 REMARK 620 4 ASP A 326 OD1 83.0 84.6 156.3 REMARK 620 5 ASP A 324 OD1 156.2 78.5 124.2 76.3 REMARK 620 6 GLU A 333 OE2 129.4 94.8 52.8 147.6 71.8 REMARK 620 7 HOH A 614 O 112.9 157.0 85.0 88.4 78.5 79.6 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 504 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4IK1 RELATED DB: PDB REMARK 900 RELATED ID: 4IK4 RELATED DB: PDB REMARK 900 RELATED ID: 4IK5 RELATED DB: PDB REMARK 900 RELATED ID: 4IK8 RELATED DB: PDB REMARK 900 RELATED ID: 4IK9 RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 (1) THIS CHIMERA COMPRISES OF 10 EXPRESSION TAGS, RESIDUES 11-58 OF REMARK 999 RCAMP, LINKER LE, RESIDUES 61-150 OF GREEN FLUORESCENT PROTEIN, REMARK 999 LINKER GGTGGSMV, RESIDUES 159-299 OF GREEN FLUORESCENT PROTEIN, REMARK 999 RESIDUES 300-448 OF RCAMP (2) RESIDUE SER 222 HAS BEEN MUTATED TO REMARK 999 GLY. RESIDUES GLY 222, TYR 223 AND GLY 224 CONSTITUTE THE REMARK 999 CHROMOPHORE CRO 222 DBREF 4IK3 A 11 58 UNP K4DIE3 K4DIE3_ENTQU 1 48 DBREF 4IK3 A 61 150 UNP P42212 GFP_AEQVI 149 238 DBREF 4IK3 A 159 301 UNP P42212 GFP_AEQVI 2 144 DBREF 4IK3 A 302 450 UNP K4DIE3 K4DIE3_ENTQU 284 432 SEQADV 4IK3 MET A 1 UNP K4DIE3 EXPRESSION TAG SEQADV 4IK3 GLY A 2 UNP K4DIE3 EXPRESSION TAG SEQADV 4IK3 SER A 3 UNP K4DIE3 EXPRESSION TAG SEQADV 4IK3 HIS A 4 UNP K4DIE3 EXPRESSION TAG SEQADV 4IK3 HIS A 5 UNP K4DIE3 EXPRESSION TAG SEQADV 4IK3 HIS A 6 UNP K4DIE3 EXPRESSION TAG SEQADV 4IK3 HIS A 7 UNP K4DIE3 EXPRESSION TAG SEQADV 4IK3 HIS A 8 UNP K4DIE3 EXPRESSION TAG SEQADV 4IK3 HIS A 9 UNP K4DIE3 EXPRESSION TAG SEQADV 4IK3 GLY A 10 UNP K4DIE3 EXPRESSION TAG SEQADV 4IK3 LEU A 59 UNP K4DIE3 LINKER SEQADV 4IK3 GLU A 60 UNP K4DIE3 LINKER SEQADV 4IK3 LYS A 65 UNP P42212 MET 153 ENGINEERED MUTATION SEQADV 4IK3 ALA A 75 UNP P42212 VAL 163 ENGINEERED MUTATION SEQADV 4IK3 GLY A 87 UNP P42212 SER 175 ENGINEERED MUTATION SEQADV 4IK3 TYR A 92 UNP P42212 ASP 180 ENGINEERED MUTATION SEQADV 4IK3 VAL A 115 UNP P42212 THR 203 ENGINEERED MUTATION SEQADV 4IK3 LYS A 118 UNP P42212 ALA 206 ENGINEERED MUTATION SEQADV 4IK3 LEU A 143 UNP P42212 HIS 231 ENGINEERED MUTATION SEQADV 4IK3 GLY A 151 UNP P42212 LINKER SEQADV 4IK3 GLY A 152 UNP P42212 LINKER SEQADV 4IK3 THR A 153 UNP P42212 LINKER SEQADV 4IK3 GLY A 154 UNP P42212 LINKER SEQADV 4IK3 GLY A 155 UNP P42212 LINKER SEQADV 4IK3 SER A 156 UNP P42212 LINKER SEQADV 4IK3 MET A 157 UNP P42212 LINKER SEQADV 4IK3 VAL A 158 UNP P42212 LINKER SEQADV 4IK3 LEU A 221 UNP P42212 PHE 64 ENGINEERED MUTATION SEQADV 4IK3 CRO A 222 UNP P42212 SER 65 CHROMOPHORE SEQADV 4IK3 CRO A 222 UNP P42212 TYR 66 CHROMOPHORE SEQADV 4IK3 CRO A 222 UNP P42212 GLY 67 CHROMOPHORE SEQADV 4IK3 ILE A 250 UNP P42212 VAL 93 ENGINEERED MUTATION SEQADV 4IK3 THR A 372 UNP K4DIE3 ILE 354 ENGINEERED MUTATION SEQRES 1 A 448 MET GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SER SEQRES 2 A 448 MET THR GLY GLY GLN GLN MET GLY ARG ASP LEU TYR ASP SEQRES 3 A 448 ASP ASP ASP LYS ASP LEU ALA THR MET VAL ASP SER SER SEQRES 4 A 448 ARG ARG LYS TRP ASN LYS THR GLY HIS ALA VAL ARG ALA SEQRES 5 A 448 ILE GLY ARG LEU SER SER LEU GLU ASN VAL TYR ILE LYS SEQRES 6 A 448 ALA ASP LYS GLN LYS ASN GLY ILE LYS ALA ASN PHE LYS SEQRES 7 A 448 ILE ARG HIS ASN ILE GLU ASP GLY GLY VAL GLN LEU ALA SEQRES 8 A 448 TYR HIS TYR GLN GLN ASN THR PRO ILE GLY ASP GLY PRO SEQRES 9 A 448 VAL LEU LEU PRO ASP ASN HIS TYR LEU SER VAL GLN SER SEQRES 10 A 448 LYS LEU SER LYS ASP PRO ASN GLU LYS ARG ASP HIS MET SEQRES 11 A 448 VAL LEU LEU GLU PHE VAL THR ALA ALA GLY ILE THR LEU SEQRES 12 A 448 GLY MET ASP GLU LEU TYR LYS GLY GLY THR GLY GLY SER SEQRES 13 A 448 MET VAL SER LYS GLY GLU GLU LEU PHE THR GLY VAL VAL SEQRES 14 A 448 PRO ILE LEU VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS SEQRES 15 A 448 LYS PHE SER VAL SER GLY GLU GLY GLU GLY ASP ALA THR SEQRES 16 A 448 TYR GLY LYS LEU THR LEU LYS PHE ILE CYS THR THR GLY SEQRES 17 A 448 LYS LEU PRO VAL PRO TRP PRO THR LEU VAL THR THR LEU SEQRES 18 A 448 CRO VAL GLN CYS PHE SER ARG TYR PRO ASP HIS MET LYS SEQRES 19 A 448 GLN HIS ASP PHE PHE LYS SER ALA MET PRO GLU GLY TYR SEQRES 20 A 448 ILE GLN GLU ARG THR ILE PHE PHE LYS ASP ASP GLY ASN SEQRES 21 A 448 TYR LYS THR ARG ALA GLU VAL LYS PHE GLU GLY ASP THR SEQRES 22 A 448 LEU VAL ASN ARG ILE GLU LEU LYS GLY ILE ASP PHE LYS SEQRES 23 A 448 GLU ASP GLY ASN ILE LEU GLY HIS LYS LEU GLU TYR ASN SEQRES 24 A 448 THR ARG ASP GLN LEU THR GLU GLU GLN ILE ALA GLU PHE SEQRES 25 A 448 LYS GLU ALA PHE SER LEU PHE ASP LYS ASP GLY ASP GLY SEQRES 26 A 448 THR ILE THR THR LYS GLU LEU GLY THR VAL MET ARG SER SEQRES 27 A 448 LEU GLY GLN ASN PRO THR GLU ALA GLU LEU GLN ASP MET SEQRES 28 A 448 ILE ASN GLU VAL ASP ALA ASP GLY ASP GLY THR ILE ASP SEQRES 29 A 448 PHE PRO GLU PHE LEU THR MET MET ALA ARG LYS MET LYS SEQRES 30 A 448 ASP THR ASP SER GLU GLU GLU ILE ARG GLU ALA PHE ARG SEQRES 31 A 448 VAL PHE ASP LYS ASP GLY ASN GLY TYR ILE SER ALA ALA SEQRES 32 A 448 GLU LEU ARG HIS VAL MET THR ASN LEU GLY GLU LYS LEU SEQRES 33 A 448 THR ASP GLU GLU VAL ASP GLU MET ILE ARG GLU ALA ASP SEQRES 34 A 448 ILE ASP GLY ASP GLY GLN VAL ASN TYR GLU GLU PHE VAL SEQRES 35 A 448 GLN MET MET THR ALA LYS MODRES 4IK3 CRO A 222 GLY MODRES 4IK3 CRO A 222 TYR MODRES 4IK3 CRO A 222 GLY HET CRO A 222 22 HET CA A 501 1 HET CA A 502 1 HET CA A 503 1 HET CA A 504 1 HETNAM CRO {2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(4- HETNAM 2 CRO HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1- HETNAM 3 CRO YL}ACETIC ACID HETNAM CA CALCIUM ION HETSYN CRO PEPTIDE DERIVED CHROMOPHORE FORMUL 1 CRO C15 H17 N3 O5 FORMUL 2 CA 4(CA 2+) FORMUL 6 HOH *240(H2 O) HELIX 1 1 SER A 38 SER A 57 1 20 HELIX 2 2 LYS A 68 ASN A 71 5 4 HELIX 3 3 LYS A 160 LEU A 164 1 5 HELIX 4 4 PRO A 213 VAL A 218 5 6 HELIX 5 5 VAL A 225 SER A 229 5 5 HELIX 6 6 PRO A 232 HIS A 238 5 7 HELIX 7 7 ASP A 239 ALA A 244 1 6 HELIX 8 8 THR A 307 ASP A 322 1 16 HELIX 9 9 THR A 330 LEU A 341 1 12 HELIX 10 10 THR A 346 GLU A 356 1 11 HELIX 11 11 PHE A 367 ALA A 375 1 9 HELIX 12 12 LYS A 379 ASP A 395 1 17 HELIX 13 13 SER A 403 GLY A 415 1 13 HELIX 14 14 THR A 419 ASP A 431 1 13 HELIX 15 15 TYR A 440 THR A 448 1 9 SHEET 1 A12 VAL A 62 ASP A 67 0 SHEET 2 A12 GLY A 72 ASN A 82 -1 O GLY A 72 N ASP A 67 SHEET 3 A12 VAL A 88 PRO A 99 -1 O GLN A 89 N HIS A 81 SHEET 4 A12 TYR A 249 PHE A 257 -1 O ILE A 250 N THR A 98 SHEET 5 A12 ASN A 262 GLU A 272 -1 O TYR A 263 N ILE A 255 SHEET 6 A12 THR A 275 ILE A 285 -1 O VAL A 277 N LYS A 270 SHEET 7 A12 VAL A 169 VAL A 179 1 N ASP A 178 O GLY A 284 SHEET 8 A12 HIS A 182 ASP A 193 -1 O PHE A 184 N GLY A 177 SHEET 9 A12 LYS A 198 CYS A 205 -1 O ILE A 204 N SER A 187 SHEET 10 A12 HIS A 129 ALA A 139 -1 N MET A 130 O PHE A 203 SHEET 11 A12 HIS A 111 SER A 120 -1 N SER A 114 O THR A 137 SHEET 12 A12 VAL A 62 ASP A 67 -1 N ILE A 64 O HIS A 111 SHEET 1 B 2 THR A 328 ILE A 329 0 SHEET 2 B 2 ILE A 365 ASP A 366 -1 O ILE A 365 N ILE A 329 SHEET 1 C 2 TYR A 401 ILE A 402 0 SHEET 2 C 2 VAL A 438 ASN A 439 -1 O VAL A 438 N ILE A 402 LINK C LEU A 221 N1 CRO A 222 1555 1555 1.26 LINK C3 CRO A 222 N VAL A 225 1555 1555 1.54 LINK OD1 ASP A 358 CA CA A 502 1555 1555 2.25 LINK OD1 ASP A 431 CA CA A 504 1555 1555 2.25 LINK O TYR A 401 CA CA A 503 1555 1555 2.25 LINK OD1 ASP A 395 CA CA A 503 1555 1555 2.26 LINK O THR A 328 CA CA A 501 1555 1555 2.27 LINK OD1 ASP A 322 CA CA A 501 1555 1555 2.27 LINK OD1 ASP A 360 CA CA A 502 1555 1555 2.31 LINK OD1 ASP A 362 CA CA A 502 1555 1555 2.34 LINK OD1 ASP A 433 CA CA A 504 1555 1555 2.34 LINK O GLN A 437 CA CA A 504 1555 1555 2.35 LINK O THR A 364 CA CA A 502 1555 1555 2.35 LINK OE2 GLU A 369 CA CA A 502 1555 1555 2.38 LINK OD1 ASP A 397 CA CA A 503 1555 1555 2.38 LINK OD1 ASP A 435 CA CA A 504 1555 1555 2.38 LINK OE2 GLU A 406 CA CA A 503 1555 1555 2.39 LINK OE1 GLU A 333 CA CA A 501 1555 1555 2.40 LINK OE1 GLU A 369 CA CA A 502 1555 1555 2.41 LINK OD1 ASN A 399 CA CA A 503 1555 1555 2.42 LINK OE1 GLU A 406 CA CA A 503 1555 1555 2.43 LINK OE1 GLU A 442 CA CA A 504 1555 1555 2.43 LINK OD1 ASP A 326 CA CA A 501 1555 1555 2.43 LINK OD1 ASP A 324 CA CA A 501 1555 1555 2.46 LINK OE2 GLU A 442 CA CA A 504 1555 1555 2.46 LINK CA CA A 502 O HOH A 603 1555 1555 2.52 LINK OE2 GLU A 333 CA CA A 501 1555 1555 2.52 LINK CA CA A 501 O HOH A 614 1555 1555 2.57 LINK CA CA A 504 O HOH A 609 1555 1555 2.61 CISPEP 1 MET A 245 PRO A 246 0 6.70 CISPEP 2 ARG A 303 ASP A 304 0 -13.39 SITE 1 AC1 6 ASP A 322 ASP A 324 ASP A 326 THR A 328 SITE 2 AC1 6 GLU A 333 HOH A 614 SITE 1 AC2 6 ASP A 358 ASP A 360 ASP A 362 THR A 364 SITE 2 AC2 6 GLU A 369 HOH A 603 SITE 1 AC3 5 ASP A 395 ASP A 397 ASN A 399 TYR A 401 SITE 2 AC3 5 GLU A 406 SITE 1 AC4 6 ASP A 431 ASP A 433 ASP A 435 GLN A 437 SITE 2 AC4 6 GLU A 442 HOH A 609 CRYST1 125.993 46.614 68.585 90.00 100.09 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007937 0.000000 0.001413 0.00000 SCALE2 0.000000 0.021453 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014810 0.00000