HEADER PROTEIN TRANSPORT 26-DEC-12 4IKB
TITLE CRYSTAL STRUCTURE OF SNX11 PX DOMAIN
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: SORTING NEXIN-11;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: PX DOMAIN, UNP RESIDUES 7-142;
COMPND 5 ENGINEERED: YES;
COMPND 6 MOL_ID: 2;
COMPND 7 MOLECULE: SORTING NEXIN-11;
COMPND 8 CHAIN: B;
COMPND 9 FRAGMENT: PX DOMAIN, UNP RESIDUES 7-142;
COMPND 10 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: SNX11;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 9 MOL_ID: 2;
SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 11 ORGANISM_COMMON: HUMAN;
SOURCE 12 ORGANISM_TAXID: 9606;
SOURCE 13 GENE: SNX11;
SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 16 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID
KEYWDS SNX11, PX DOMAIN, PROTEIN TRANSPORT
EXPDTA X-RAY DIFFRACTION
AUTHOR J.XU,T.XU,J.LIU
REVDAT 1 24-APR-13 4IKB 0
JRNL AUTH J.XU,T.XU,J.LIU
JRNL TITL STRUCTURE OF SORTING NEXIN 11 (SNX11) REVEALS A NOVEL
JRNL TITL 2 EXTENDED PX DOMAIN (PXE DOMAIN) CRITICAL FOR THE INHIBITION
JRNL TITL 3 OF SORTING NEXIN 10 (SNX10) INDUCED VACUOLATION
JRNL REF TO BE PUBLISHED
JRNL REFN
REMARK 2
REMARK 2 RESOLUTION. 1.78 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC 5.6.0117
REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON
REMARK 3
REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.12
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0
REMARK 3 NUMBER OF REFLECTIONS : 27834
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.171
REMARK 3 R VALUE (WORKING SET) : 0.169
REMARK 3 FREE R VALUE : 0.221
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100
REMARK 3 FREE R VALUE TEST SET COUNT : 1407
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.78
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.83
REMARK 3 REFLECTION IN BIN (WORKING SET) : 1823
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.56
REMARK 3 BIN R VALUE (WORKING SET) : 0.1850
REMARK 3 BIN FREE R VALUE SET COUNT : 92
REMARK 3 BIN FREE R VALUE : 0.2390
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 2111
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 78
REMARK 3 SOLVENT ATOMS : 247
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.47
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : 0.35000
REMARK 3 B22 (A**2) : -0.09000
REMARK 3 B33 (A**2) : -0.16000
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.27000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): 0.119
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.124
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.074
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.267
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2258 ; 0.013 ; 0.019
REMARK 3 BOND LENGTHS OTHERS (A): 1584 ; 0.007 ; 0.020
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3051 ; 1.732 ; 1.980
REMARK 3 BOND ANGLES OTHERS (DEGREES): 3840 ; 0.942 ; 3.000
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 268 ; 6.096 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 112 ;34.794 ;23.125
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 393 ;13.332 ;15.000
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;15.518 ;15.000
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 341 ; 0.130 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2417 ; 0.008 ; 0.020
REMARK 3 GENERAL PLANES OTHERS (A): 481 ; 0.001 ; 0.020
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : NULL
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : MASK
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.20
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING
REMARK 3 POSITIONS U VALUES: REFINED INDIVIDUALLY
REMARK 4
REMARK 4 4IKB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-JAN-13.
REMARK 100 THE RCSB ID CODE IS RCSB076859.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : NULL
REMARK 200 TEMPERATURE (KELVIN) : NULL
REMARK 200 PH : 6.5
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : SSRF
REMARK 200 BEAMLINE : BL17U
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL
REMARK 200 DATA SCALING SOFTWARE : SCALA
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27836
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.776
REMARK 200 RESOLUTION RANGE LOW (A) : 72.069
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4
REMARK 200 DATA REDUNDANCY : 5.200
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : 0.06400
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.6000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88
REMARK 200 COMPLETENESS FOR SHELL (%) : 96.4
REMARK 200 DATA REDUNDANCY IN SHELL : 5.30
REMARK 200 R MERGE FOR SHELL (I) : 0.12900
REMARK 200 R SYM FOR SHELL (I) : 0.12900
REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.200
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: BALBES
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 43.55
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM SULFATE, 0.1M SODIUM
REMARK 280 CACODYLATE TRIHYDRATE PH 6.5, 30% PEG 8000, VAPOR DIFFUSION,
REMARK 280 TEMPERATURE 293K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 19.37000
REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 2710 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 15430 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -128.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A 7
REMARK 465 SER A 8
REMARK 465 GLU A 9
REMARK 465 ASN A 10
REMARK 465 GLN A 11
REMARK 465 GLU A 12
REMARK 465 GLN A 13
REMARK 465 GLU A 14
REMARK 465 GLU A 144
REMARK 465 HIS A 145
REMARK 465 HIS A 146
REMARK 465 HIS A 147
REMARK 465 HIS A 148
REMARK 465 HIS A 149
REMARK 465 HIS A 150
REMARK 465 MET B 7
REMARK 465 SER B 8
REMARK 465 GLU B 9
REMARK 465 ASN B 10
REMARK 465 GLN B 11
REMARK 465 GLU B 12
REMARK 465 GLN B 13
REMARK 465 GLU B 14
REMARK 465 ARG B 142
REMARK 465 LEU B 143
REMARK 465 GLU B 144
REMARK 465 HIS B 145
REMARK 465 HIS B 146
REMARK 465 HIS B 147
REMARK 465 HIS B 148
REMARK 465 HIS B 149
REMARK 465 HIS B 150
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 OE1 GLU A 94 O HOH A 342 2.04
REMARK 500 NE2 GLN A 69 O HOH A 360 2.06
REMARK 500 OG1 THR A 91 O HOH A 368 2.19
REMARK 500
REMARK 500 REMARK: NULL
REMARK 610
REMARK 610 MISSING HETEROATOM
REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 610 I=INSERTION CODE):
REMARK 610 M RES C SSEQI
REMARK 610 PE5 A 207
REMARK 610 PE5 A 208
REMARK 610 PE5 A 212
REMARK 610 PE5 B 203
REMARK 610 PE5 B 206
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 201
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 202
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 203
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 204
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 205
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 206
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PE5 A 207
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC8
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PE5 A 208
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC9
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 210
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 211
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PE5 A 212
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 201
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 202
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PE5 B 203
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 204
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 205
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC8
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PE5 B 206
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 4IKD RELATED DB: PDB
DBREF 4IKB A 7 142 UNP Q9Y5W9 SNX11_HUMAN 7 142
DBREF 4IKB B 7 142 UNP Q9Y5W9 SNX11_HUMAN 7 142
SEQADV 4IKB LEU A 143 UNP Q9Y5W9 EXPRESSION TAG
SEQADV 4IKB GLU A 144 UNP Q9Y5W9 EXPRESSION TAG
SEQADV 4IKB HIS A 145 UNP Q9Y5W9 EXPRESSION TAG
SEQADV 4IKB HIS A 146 UNP Q9Y5W9 EXPRESSION TAG
SEQADV 4IKB HIS A 147 UNP Q9Y5W9 EXPRESSION TAG
SEQADV 4IKB HIS A 148 UNP Q9Y5W9 EXPRESSION TAG
SEQADV 4IKB HIS A 149 UNP Q9Y5W9 EXPRESSION TAG
SEQADV 4IKB HIS A 150 UNP Q9Y5W9 EXPRESSION TAG
SEQADV 4IKB LEU B 143 UNP Q9Y5W9 EXPRESSION TAG
SEQADV 4IKB GLU B 144 UNP Q9Y5W9 EXPRESSION TAG
SEQADV 4IKB HIS B 145 UNP Q9Y5W9 EXPRESSION TAG
SEQADV 4IKB HIS B 146 UNP Q9Y5W9 EXPRESSION TAG
SEQADV 4IKB HIS B 147 UNP Q9Y5W9 EXPRESSION TAG
SEQADV 4IKB HIS B 148 UNP Q9Y5W9 EXPRESSION TAG
SEQADV 4IKB HIS B 149 UNP Q9Y5W9 EXPRESSION TAG
SEQADV 4IKB HIS B 150 UNP Q9Y5W9 EXPRESSION TAG
SEQRES 1 A 144 MET SER GLU ASN GLN GLU GLN GLU GLU VAL ILE THR VAL
SEQRES 2 A 144 ARG VAL GLN ASP PRO ARG VAL GLN ASN GLU GLY SER TRP
SEQRES 3 A 144 ASN SER TYR VAL ASP TYR LYS ILE PHE LEU HIS THR ASN
SEQRES 4 A 144 SER LYS ALA PHE THR ALA LYS THR SER CAS VAL ARG ARG
SEQRES 5 A 144 ARG TYR ARG GLU PHE VAL TRP LEU ARG LYS GLN LEU GLN
SEQRES 6 A 144 ARG ASN ALA GLY LEU VAL PRO VAL PRO GLU LEU PRO GLY
SEQRES 7 A 144 LYS SER THR PHE PHE GLY THR SER ASP GLU PHE ILE GLU
SEQRES 8 A 144 LYS ARG ARG GLN GLY LEU GLN HIS PHE LEU GLU LYS VAL
SEQRES 9 A 144 LEU GLN SER VAL VAL LEU LEU SER ASP SER GLN LEU HIS
SEQRES 10 A 144 LEU PHE LEU GLN SER GLN LEU SER VAL PRO GLU ILE GLU
SEQRES 11 A 144 ALA CAS VAL GLN GLY ARG LEU GLU HIS HIS HIS HIS HIS
SEQRES 12 A 144 HIS
SEQRES 1 B 144 MET SER GLU ASN GLN GLU GLN GLU GLU VAL ILE THR VAL
SEQRES 2 B 144 ARG VAL GLN ASP PRO ARG VAL GLN ASN GLU GLY SER TRP
SEQRES 3 B 144 ASN SER TYR VAL ASP TYR LYS ILE PHE LEU HIS THR ASN
SEQRES 4 B 144 SER LYS ALA PHE THR ALA LYS THR SER CAS VAL ARG ARG
SEQRES 5 B 144 ARG TYR ARG GLU PHE VAL TRP LEU ARG LYS GLN LEU GLN
SEQRES 6 B 144 ARG ASN ALA GLY LEU VAL PRO VAL PRO GLU LEU PRO GLY
SEQRES 7 B 144 LYS SER THR PHE PHE GLY THR SER ASP GLU PHE ILE GLU
SEQRES 8 B 144 LYS ARG ARG GLN GLY LEU GLN HIS PHE LEU GLU LYS VAL
SEQRES 9 B 144 LEU GLN SER VAL VAL LEU LEU SER ASP SER GLN LEU HIS
SEQRES 10 B 144 LEU PHE LEU GLN SER GLN LEU SER VAL PRO GLU ILE GLU
SEQRES 11 B 144 ALA SCS VAL GLN GLY ARG LEU GLU HIS HIS HIS HIS HIS
SEQRES 12 B 144 HIS
MODRES 4IKB CAS A 55 CYS S-(DIMETHYLARSENIC)CYSTEINE
MODRES 4IKB CAS A 138 CYS S-(DIMETHYLARSENIC)CYSTEINE
MODRES 4IKB CAS B 55 CYS S-(DIMETHYLARSENIC)CYSTEINE
MODRES 4IKB SCS B 138 CYS 3-(ETHYLDISULFANYL)-L-ALANINE
HET CAS A 55 9
HET CAS A 138 9
HET CAS B 55 9
HET SCS B 138 9
HET SO4 A 201 5
HET SO4 A 202 5
HET SO4 A 203 5
HET SO4 A 204 5
HET SO4 A 205 5
HET SO4 A 206 5
HET PE5 A 207 3
HET PE5 A 208 7
HET CL A 209 1
HET NA A 210 1
HET CL A 211 1
HET PE5 A 212 7
HET SO4 B 201 5
HET SO4 B 202 5
HET PE5 B 203 3
HET NA B 204 1
HET CL B 205 1
HET PE5 B 206 13
HETNAM CAS S-(DIMETHYLARSENIC)CYSTEINE
HETNAM SCS 3-(ETHYLDISULFANYL)-L-ALANINE
HETNAM SO4 SULFATE ION
HETNAM PE5 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
HETNAM CL CHLORIDE ION
HETNAM NA SODIUM ION
HETSYN PE5 2-(2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-
HETSYN 2 PE5 ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, POLYETHYLENE
HETSYN 3 PE5 GLYCOL PEG400
FORMUL 1 CAS 3(C5 H12 AS N O2 S)
FORMUL 2 SCS C5 H11 N O2 S2
FORMUL 3 SO4 8(O4 S 2-)
FORMUL 9 PE5 5(C18 H38 O9)
FORMUL 11 CL 3(CL 1-)
FORMUL 12 NA 2(NA 1+)
FORMUL 21 HOH *247(H2 O)
HELIX 1 1 TYR A 60 GLN A 71 1 12
HELIX 2 2 THR A 91 GLN A 112 1 22
HELIX 3 3 SER A 113 SER A 118 1 6
HELIX 4 4 ASP A 119 SER A 128 1 10
HELIX 5 5 SER A 131 VAL A 139 1 9
HELIX 6 6 TYR B 60 GLY B 75 1 16
HELIX 7 7 THR B 91 GLN B 112 1 22
HELIX 8 8 ASP B 119 SER B 128 1 10
HELIX 9 9 SER B 131 GLY B 141 1 11
SHEET 1 A 3 ILE A 17 GLN A 27 0
SHEET 2 A 3 TYR A 35 THR A 44 -1 O TYR A 35 N GLN A 27
SHEET 3 A 3 THR A 53 ARG A 59 -1 O VAL A 56 N ILE A 40
SHEET 1 B 3 ILE B 17 GLN B 27 0
SHEET 2 B 3 TYR B 35 THR B 44 -1 O TYR B 35 N GLN B 27
SHEET 3 B 3 THR B 53 ARG B 59 -1 O VAL B 56 N ILE B 40
LINK C SER A 54 N CAS A 55 1555 1555 1.33
LINK C CAS A 55 N VAL A 56 1555 1555 1.33
LINK C ALA A 137 N CAS A 138 1555 1555 1.33
LINK C CAS A 138 N VAL A 139 1555 1555 1.34
LINK C SER B 54 N CAS B 55 1555 1555 1.33
LINK C CAS B 55 N VAL B 56 1555 1555 1.32
LINK C ALA B 137 N SCS B 138 1555 1555 1.33
LINK C SCS B 138 N VAL B 139 1555 1555 1.32
SITE 1 AC1 4 ARG A 57 GLN A 129 PE5 A 212 HOH A 410
SITE 1 AC2 9 ARG A 59 TYR A 60 ARG A 61 HOH A 313
SITE 2 AC2 9 HOH A 358 HOH A 391 HOH A 403 HOH A 417
SITE 3 AC2 9 HOH A 430
SITE 1 AC3 5 GLY A 84 LYS A 85 SER A 86 HIS B 105
SITE 2 AC3 5 LYS B 109
SITE 1 AC4 5 LYS A 68 ARG A 72 HOH A 307 HOH A 347
SITE 2 AC4 5 HOH A 429
SITE 1 AC5 2 ARG A 61 HOH A 432
SITE 1 AC6 5 ARG A 25 GLN A 71 PRO A 78 VAL A 79
SITE 2 AC6 5 PE5 A 207
SITE 1 AC7 3 ARG A 67 GLN A 71 SO4 A 206
SITE 1 AC8 4 THR A 87 PHE A 89 GLY A 90 HOH A 348
SITE 1 AC9 1 LYS A 52
SITE 1 BC1 2 GLY A 141 LEU A 143
SITE 1 BC2 5 GLN A 27 ASP A 37 SO4 A 201 HOH A 326
SITE 2 BC2 5 HOH A 398
SITE 1 BC3 8 ARG B 59 TYR B 60 ARG B 61 HOH B 303
SITE 2 BC3 8 HOH B 305 HOH B 314 HOH B 353 HOH B 389
SITE 1 BC4 1 LYS B 68
SITE 1 BC5 4 HOH A 438 GLY B 90 THR B 91 GLU B 94
SITE 1 BC6 2 HOH A 378 HOH B 383
SITE 1 BC7 4 VAL B 26 ASN B 28 GLU B 29 HOH B 379
SITE 1 BC8 4 GLN B 22 ASP B 23 LYS B 39 PHE B 41
CRYST1 53.480 38.740 73.460 90.00 101.13 90.00 P 1 21 1 2
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.018699 0.000000 0.003679 0.00000
SCALE2 0.000000 0.025813 0.000000 0.00000
SCALE3 0.000000 0.000000 0.013874 0.00000