HEADER PROTEIN TRANSPORT 26-DEC-12 4IKB TITLE CRYSTAL STRUCTURE OF SNX11 PX DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: SORTING NEXIN-11; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PX DOMAIN, UNP RESIDUES 7-142; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: SORTING NEXIN-11; COMPND 8 CHAIN: B; COMPND 9 FRAGMENT: PX DOMAIN, UNP RESIDUES 7-142; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SNX11; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: SNX11; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS SNX11, PX DOMAIN, PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR J.XU,T.XU,J.LIU REVDAT 1 24-APR-13 4IKB 0 JRNL AUTH J.XU,T.XU,J.LIU JRNL TITL STRUCTURE OF SORTING NEXIN 11 (SNX11) REVEALS A NOVEL JRNL TITL 2 EXTENDED PX DOMAIN (PXE DOMAIN) CRITICAL FOR THE INHIBITION JRNL TITL 3 OF SORTING NEXIN 10 (SNX10) INDUCED VACUOLATION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.12 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 27834 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1407 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.78 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.83 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1823 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.56 REMARK 3 BIN R VALUE (WORKING SET) : 0.1850 REMARK 3 BIN FREE R VALUE SET COUNT : 92 REMARK 3 BIN FREE R VALUE : 0.2390 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2111 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 78 REMARK 3 SOLVENT ATOMS : 247 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.35000 REMARK 3 B22 (A**2) : -0.09000 REMARK 3 B33 (A**2) : -0.16000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.27000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.119 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.124 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.074 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.267 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2258 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1584 ; 0.007 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3051 ; 1.732 ; 1.980 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3840 ; 0.942 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 268 ; 6.096 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 112 ;34.794 ;23.125 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 393 ;13.332 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;15.518 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 341 ; 0.130 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2417 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 481 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES: REFINED INDIVIDUALLY REMARK 4 REMARK 4 4IKB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-JAN-13. REMARK 100 THE RCSB ID CODE IS RCSB076859. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27836 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.776 REMARK 200 RESOLUTION RANGE LOW (A) : 72.069 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06400 REMARK 200 FOR THE DATA SET : 17.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.4 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.12900 REMARK 200 R SYM FOR SHELL (I) : 0.12900 REMARK 200 FOR SHELL : 5.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM SULFATE, 0.1M SODIUM REMARK 280 CACODYLATE TRIHYDRATE PH 6.5, 30% PEG 8000, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 19.37000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -128.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 7 REMARK 465 SER A 8 REMARK 465 GLU A 9 REMARK 465 ASN A 10 REMARK 465 GLN A 11 REMARK 465 GLU A 12 REMARK 465 GLN A 13 REMARK 465 GLU A 14 REMARK 465 GLU A 144 REMARK 465 HIS A 145 REMARK 465 HIS A 146 REMARK 465 HIS A 147 REMARK 465 HIS A 148 REMARK 465 HIS A 149 REMARK 465 HIS A 150 REMARK 465 MET B 7 REMARK 465 SER B 8 REMARK 465 GLU B 9 REMARK 465 ASN B 10 REMARK 465 GLN B 11 REMARK 465 GLU B 12 REMARK 465 GLN B 13 REMARK 465 GLU B 14 REMARK 465 ARG B 142 REMARK 465 LEU B 143 REMARK 465 GLU B 144 REMARK 465 HIS B 145 REMARK 465 HIS B 146 REMARK 465 HIS B 147 REMARK 465 HIS B 148 REMARK 465 HIS B 149 REMARK 465 HIS B 150 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 94 O HOH A 342 2.04 REMARK 500 NE2 GLN A 69 O HOH A 360 2.06 REMARK 500 OG1 THR A 91 O HOH A 368 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PE5 A 207 REMARK 610 PE5 A 208 REMARK 610 PE5 A 212 REMARK 610 PE5 B 203 REMARK 610 PE5 B 206 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PE5 A 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PE5 A 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 210 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 211 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PE5 A 212 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PE5 B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PE5 B 206 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4IKD RELATED DB: PDB DBREF 4IKB A 7 142 UNP Q9Y5W9 SNX11_HUMAN 7 142 DBREF 4IKB B 7 142 UNP Q9Y5W9 SNX11_HUMAN 7 142 SEQADV 4IKB LEU A 143 UNP Q9Y5W9 EXPRESSION TAG SEQADV 4IKB GLU A 144 UNP Q9Y5W9 EXPRESSION TAG SEQADV 4IKB HIS A 145 UNP Q9Y5W9 EXPRESSION TAG SEQADV 4IKB HIS A 146 UNP Q9Y5W9 EXPRESSION TAG SEQADV 4IKB HIS A 147 UNP Q9Y5W9 EXPRESSION TAG SEQADV 4IKB HIS A 148 UNP Q9Y5W9 EXPRESSION TAG SEQADV 4IKB HIS A 149 UNP Q9Y5W9 EXPRESSION TAG SEQADV 4IKB HIS A 150 UNP Q9Y5W9 EXPRESSION TAG SEQADV 4IKB LEU B 143 UNP Q9Y5W9 EXPRESSION TAG SEQADV 4IKB GLU B 144 UNP Q9Y5W9 EXPRESSION TAG SEQADV 4IKB HIS B 145 UNP Q9Y5W9 EXPRESSION TAG SEQADV 4IKB HIS B 146 UNP Q9Y5W9 EXPRESSION TAG SEQADV 4IKB HIS B 147 UNP Q9Y5W9 EXPRESSION TAG SEQADV 4IKB HIS B 148 UNP Q9Y5W9 EXPRESSION TAG SEQADV 4IKB HIS B 149 UNP Q9Y5W9 EXPRESSION TAG SEQADV 4IKB HIS B 150 UNP Q9Y5W9 EXPRESSION TAG SEQRES 1 A 144 MET SER GLU ASN GLN GLU GLN GLU GLU VAL ILE THR VAL SEQRES 2 A 144 ARG VAL GLN ASP PRO ARG VAL GLN ASN GLU GLY SER TRP SEQRES 3 A 144 ASN SER TYR VAL ASP TYR LYS ILE PHE LEU HIS THR ASN SEQRES 4 A 144 SER LYS ALA PHE THR ALA LYS THR SER CAS VAL ARG ARG SEQRES 5 A 144 ARG TYR ARG GLU PHE VAL TRP LEU ARG LYS GLN LEU GLN SEQRES 6 A 144 ARG ASN ALA GLY LEU VAL PRO VAL PRO GLU LEU PRO GLY SEQRES 7 A 144 LYS SER THR PHE PHE GLY THR SER ASP GLU PHE ILE GLU SEQRES 8 A 144 LYS ARG ARG GLN GLY LEU GLN HIS PHE LEU GLU LYS VAL SEQRES 9 A 144 LEU GLN SER VAL VAL LEU LEU SER ASP SER GLN LEU HIS SEQRES 10 A 144 LEU PHE LEU GLN SER GLN LEU SER VAL PRO GLU ILE GLU SEQRES 11 A 144 ALA CAS VAL GLN GLY ARG LEU GLU HIS HIS HIS HIS HIS SEQRES 12 A 144 HIS SEQRES 1 B 144 MET SER GLU ASN GLN GLU GLN GLU GLU VAL ILE THR VAL SEQRES 2 B 144 ARG VAL GLN ASP PRO ARG VAL GLN ASN GLU GLY SER TRP SEQRES 3 B 144 ASN SER TYR VAL ASP TYR LYS ILE PHE LEU HIS THR ASN SEQRES 4 B 144 SER LYS ALA PHE THR ALA LYS THR SER CAS VAL ARG ARG SEQRES 5 B 144 ARG TYR ARG GLU PHE VAL TRP LEU ARG LYS GLN LEU GLN SEQRES 6 B 144 ARG ASN ALA GLY LEU VAL PRO VAL PRO GLU LEU PRO GLY SEQRES 7 B 144 LYS SER THR PHE PHE GLY THR SER ASP GLU PHE ILE GLU SEQRES 8 B 144 LYS ARG ARG GLN GLY LEU GLN HIS PHE LEU GLU LYS VAL SEQRES 9 B 144 LEU GLN SER VAL VAL LEU LEU SER ASP SER GLN LEU HIS SEQRES 10 B 144 LEU PHE LEU GLN SER GLN LEU SER VAL PRO GLU ILE GLU SEQRES 11 B 144 ALA SCS VAL GLN GLY ARG LEU GLU HIS HIS HIS HIS HIS SEQRES 12 B 144 HIS MODRES 4IKB CAS A 55 CYS S-(DIMETHYLARSENIC)CYSTEINE MODRES 4IKB CAS A 138 CYS S-(DIMETHYLARSENIC)CYSTEINE MODRES 4IKB CAS B 55 CYS S-(DIMETHYLARSENIC)CYSTEINE MODRES 4IKB SCS B 138 CYS 3-(ETHYLDISULFANYL)-L-ALANINE HET CAS A 55 9 HET CAS A 138 9 HET CAS B 55 9 HET SCS B 138 9 HET SO4 A 201 5 HET SO4 A 202 5 HET SO4 A 203 5 HET SO4 A 204 5 HET SO4 A 205 5 HET SO4 A 206 5 HET PE5 A 207 3 HET PE5 A 208 7 HET CL A 209 1 HET NA A 210 1 HET CL A 211 1 HET PE5 A 212 7 HET SO4 B 201 5 HET SO4 B 202 5 HET PE5 B 203 3 HET NA B 204 1 HET CL B 205 1 HET PE5 B 206 13 HETNAM CAS S-(DIMETHYLARSENIC)CYSTEINE HETNAM SCS 3-(ETHYLDISULFANYL)-L-ALANINE HETNAM SO4 SULFATE ION HETNAM PE5 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION HETSYN PE5 2-(2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}- HETSYN 2 PE5 ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, POLYETHYLENE HETSYN 3 PE5 GLYCOL PEG400 FORMUL 1 CAS 3(C5 H12 AS N O2 S) FORMUL 2 SCS C5 H11 N O2 S2 FORMUL 3 SO4 8(O4 S 2-) FORMUL 9 PE5 5(C18 H38 O9) FORMUL 11 CL 3(CL 1-) FORMUL 12 NA 2(NA 1+) FORMUL 21 HOH *247(H2 O) HELIX 1 1 TYR A 60 GLN A 71 1 12 HELIX 2 2 THR A 91 GLN A 112 1 22 HELIX 3 3 SER A 113 SER A 118 1 6 HELIX 4 4 ASP A 119 SER A 128 1 10 HELIX 5 5 SER A 131 VAL A 139 1 9 HELIX 6 6 TYR B 60 GLY B 75 1 16 HELIX 7 7 THR B 91 GLN B 112 1 22 HELIX 8 8 ASP B 119 SER B 128 1 10 HELIX 9 9 SER B 131 GLY B 141 1 11 SHEET 1 A 3 ILE A 17 GLN A 27 0 SHEET 2 A 3 TYR A 35 THR A 44 -1 O TYR A 35 N GLN A 27 SHEET 3 A 3 THR A 53 ARG A 59 -1 O VAL A 56 N ILE A 40 SHEET 1 B 3 ILE B 17 GLN B 27 0 SHEET 2 B 3 TYR B 35 THR B 44 -1 O TYR B 35 N GLN B 27 SHEET 3 B 3 THR B 53 ARG B 59 -1 O VAL B 56 N ILE B 40 LINK C SER A 54 N CAS A 55 1555 1555 1.33 LINK C CAS A 55 N VAL A 56 1555 1555 1.33 LINK C ALA A 137 N CAS A 138 1555 1555 1.33 LINK C CAS A 138 N VAL A 139 1555 1555 1.34 LINK C SER B 54 N CAS B 55 1555 1555 1.33 LINK C CAS B 55 N VAL B 56 1555 1555 1.32 LINK C ALA B 137 N SCS B 138 1555 1555 1.33 LINK C SCS B 138 N VAL B 139 1555 1555 1.32 SITE 1 AC1 4 ARG A 57 GLN A 129 PE5 A 212 HOH A 410 SITE 1 AC2 9 ARG A 59 TYR A 60 ARG A 61 HOH A 313 SITE 2 AC2 9 HOH A 358 HOH A 391 HOH A 403 HOH A 417 SITE 3 AC2 9 HOH A 430 SITE 1 AC3 5 GLY A 84 LYS A 85 SER A 86 HIS B 105 SITE 2 AC3 5 LYS B 109 SITE 1 AC4 5 LYS A 68 ARG A 72 HOH A 307 HOH A 347 SITE 2 AC4 5 HOH A 429 SITE 1 AC5 2 ARG A 61 HOH A 432 SITE 1 AC6 5 ARG A 25 GLN A 71 PRO A 78 VAL A 79 SITE 2 AC6 5 PE5 A 207 SITE 1 AC7 3 ARG A 67 GLN A 71 SO4 A 206 SITE 1 AC8 4 THR A 87 PHE A 89 GLY A 90 HOH A 348 SITE 1 AC9 1 LYS A 52 SITE 1 BC1 2 GLY A 141 LEU A 143 SITE 1 BC2 5 GLN A 27 ASP A 37 SO4 A 201 HOH A 326 SITE 2 BC2 5 HOH A 398 SITE 1 BC3 8 ARG B 59 TYR B 60 ARG B 61 HOH B 303 SITE 2 BC3 8 HOH B 305 HOH B 314 HOH B 353 HOH B 389 SITE 1 BC4 1 LYS B 68 SITE 1 BC5 4 HOH A 438 GLY B 90 THR B 91 GLU B 94 SITE 1 BC6 2 HOH A 378 HOH B 383 SITE 1 BC7 4 VAL B 26 ASN B 28 GLU B 29 HOH B 379 SITE 1 BC8 4 GLN B 22 ASP B 23 LYS B 39 PHE B 41 CRYST1 53.480 38.740 73.460 90.00 101.13 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018699 0.000000 0.003679 0.00000 SCALE2 0.000000 0.025813 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013874 0.00000