HEADER SIGNALING PROTEIN 26-DEC-12 4IKM TITLE X-RAY STRUCTURE OF CARD8 CARD DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: MALTOSE-BINDING PERIPLASMIC PROTEIN, CASPASE RECRUITMENT COMPND 3 DOMAIN-CONTAINING PROTEIN 8; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: MBP TAGGED HUMAN CARD8 CARD DOMAIN; COMPND 6 SYNONYM: MBP, MMBP, MALTODEXTRIN-BINDING PROTEIN, APOPTOTIC PROTEIN COMPND 7 NDPP1, CARD-INHIBITOR OF NF-KAPPA-B-ACTIVATING LIGAND, CARDINAL, COMPND 8 DACAR, TUMOR UP-REGULATED CARD-CONTAINING ANTAGONIST OF CASP9, TUCAN; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI, HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 83333, 9606; SOURCE 5 STRAIN: K12; SOURCE 6 GENE: B4034, CARD8, TUCAN, CARDINAL, JW3994, MALE, KIAA0955, NDPP1; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET30A KEYWDS DEATH FOLD SUPERFAMILY, SIX-HELIX BUNDLE, INFLAMMASOME, APOPTOSIS, KEYWDS 2 INNATE IMMUNE SYSTEM, SIGNAL TRANSDUCTION, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.JIN,M.HUANG,P.SMITH,J.JIANG,T.XIAO REVDAT 6 20-SEP-23 4IKM 1 REMARK HETSYN REVDAT 5 29-JUL-20 4IKM 1 COMPND REMARK SEQADV HET REVDAT 5 2 1 HETNAM FORMUL LINK SITE REVDAT 5 3 1 ATOM REVDAT 4 15-NOV-17 4IKM 1 REMARK REVDAT 3 02-AUG-17 4IKM 1 SOURCE REMARK REVDAT 2 05-JUN-13 4IKM 1 JRNL REVDAT 1 08-MAY-13 4IKM 0 JRNL AUTH T.JIN,M.HUANG,P.SMITH,J.JIANG,T.S.XIAO JRNL TITL THE STRUCTURE OF THE CARD8 CASPASE-RECRUITMENT DOMAIN JRNL TITL 2 SUGGESTS ITS ASSOCIATION WITH THE FIIND DOMAIN AND JRNL TITL 3 PROCASPASES THROUGH ADJACENT SURFACES. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 69 482 2013 JRNL REFN ESSN 1744-3091 JRNL PMID 23695559 JRNL DOI 10.1107/S1744309113010075 REMARK 2 REMARK 2 RESOLUTION. 2.46 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_1217) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.46 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.44 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 21881 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 1121 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.4473 - 4.9197 0.99 2827 131 0.1982 0.2408 REMARK 3 2 4.9197 - 3.9055 1.00 2648 144 0.1676 0.1991 REMARK 3 3 3.9055 - 3.4120 1.00 2614 138 0.1886 0.2809 REMARK 3 4 3.4120 - 3.1001 1.00 2582 142 0.2162 0.2706 REMARK 3 5 3.1001 - 2.8779 1.00 2555 140 0.2403 0.2855 REMARK 3 6 2.8779 - 2.7082 1.00 2548 141 0.2417 0.2972 REMARK 3 7 2.7082 - 2.5726 1.00 2543 141 0.2606 0.3379 REMARK 3 8 2.5726 - 2.4606 0.96 2443 144 0.2859 0.3700 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.320 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3706 REMARK 3 ANGLE : 0.853 5033 REMARK 3 CHIRALITY : 0.057 558 REMARK 3 PLANARITY : 0.004 649 REMARK 3 DIHEDRAL : 11.586 1343 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 43 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.3915 -54.1861 -0.7869 REMARK 3 T TENSOR REMARK 3 T11: 0.5570 T22: 0.6295 REMARK 3 T33: 0.9253 T12: -0.1394 REMARK 3 T13: 0.2736 T23: 0.0302 REMARK 3 L TENSOR REMARK 3 L11: 2.8538 L22: 9.7868 REMARK 3 L33: 5.5406 L12: -4.0879 REMARK 3 L13: 1.4802 L23: 0.0740 REMARK 3 S TENSOR REMARK 3 S11: -0.1107 S12: -0.0562 S13: -1.1750 REMARK 3 S21: -0.8014 S22: 0.4890 S23: -0.4247 REMARK 3 S31: 0.7249 S32: -0.2100 S33: -0.2991 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 44 THROUGH 315 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.6181 -32.6164 -3.8111 REMARK 3 T TENSOR REMARK 3 T11: 0.5223 T22: 0.6059 REMARK 3 T33: 0.5155 T12: -0.1290 REMARK 3 T13: 0.1508 T23: 0.1409 REMARK 3 L TENSOR REMARK 3 L11: 3.2509 L22: 5.3941 REMARK 3 L33: 2.8044 L12: -0.8980 REMARK 3 L13: -0.2151 L23: 0.1123 REMARK 3 S TENSOR REMARK 3 S11: -0.2167 S12: 0.6090 S13: -0.0013 REMARK 3 S21: -0.7146 S22: 0.3009 S23: -0.0615 REMARK 3 S31: -0.1726 S32: -0.2153 S33: -0.0813 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 316 THROUGH 357 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.3901 -27.0186 3.0953 REMARK 3 T TENSOR REMARK 3 T11: 0.4260 T22: 0.5770 REMARK 3 T33: 0.6639 T12: 0.0038 REMARK 3 T13: 0.0943 T23: 0.1715 REMARK 3 L TENSOR REMARK 3 L11: 3.4275 L22: 5.9774 REMARK 3 L33: 3.9627 L12: -1.9999 REMARK 3 L13: 1.2763 L23: 0.6829 REMARK 3 S TENSOR REMARK 3 S11: -0.6122 S12: 0.1362 S13: -0.0490 REMARK 3 S21: 0.2632 S22: 0.3205 S23: 0.5543 REMARK 3 S31: 0.3059 S32: -0.4721 S33: 0.2812 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 358 THROUGH 463 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.4126 -30.7957 28.1006 REMARK 3 T TENSOR REMARK 3 T11: 0.7837 T22: 0.6148 REMARK 3 T33: 0.8813 T12: 0.1477 REMARK 3 T13: 0.2124 T23: 0.0716 REMARK 3 L TENSOR REMARK 3 L11: 3.2551 L22: 5.4574 REMARK 3 L33: 6.9699 L12: -0.1134 REMARK 3 L13: 1.5750 L23: -5.6011 REMARK 3 S TENSOR REMARK 3 S11: 0.3380 S12: -0.2455 S13: 0.8755 REMARK 3 S21: 0.5682 S22: -0.3100 S23: -0.4824 REMARK 3 S31: -0.6356 S32: -0.2489 S33: 0.0265 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4IKM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1000076870. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 5.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21951 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 18.20 REMARK 200 R MERGE FOR SHELL (I) : 0.94500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3VD8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16% PEG8000, 0.1 M NAI, 0.1 M NAAC, PH REMARK 280 5.2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 146.26000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 73.13000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 109.69500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 36.56500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 182.82500 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 146.26000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 73.13000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 36.56500 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 109.69500 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 182.82500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 464 REMARK 465 HIS A 465 REMARK 465 HIS A 466 REMARK 465 HIS A 467 REMARK 465 HIS A 468 REMARK 465 HIS A 469 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 TYI A 172 CG CE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 109 -58.75 -125.73 REMARK 500 LEU A 122 -20.69 -152.11 REMARK 500 LEU A 123 85.48 -151.78 REMARK 500 ALA A 169 -76.29 -77.96 REMARK 500 ALA A 173 65.50 -115.05 REMARK 500 ASP A 210 -161.97 -122.94 REMARK 500 ALA A 240 6.07 57.93 REMARK 500 VAL A 370 70.37 -114.13 REMARK 500 REMARK 500 REMARK: NULL DBREF 4IKM A 2 367 UNP P0AEX9 MALE_ECOLI 27 392 DBREF 4IKM A 372 458 UNP Q9Y2G2 CARD8_HUMAN 345 431 SEQADV 4IKM MET A 1 UNP P0AEX9 EXPRESSION TAG SEQADV 4IKM ALA A 83 UNP P0AEX9 ASP 108 CONFLICT SEQADV 4IKM ALA A 84 UNP P0AEX9 LYS 109 CONFLICT SEQADV 4IKM ALA A 173 UNP P0AEX9 GLU 198 CONFLICT SEQADV 4IKM ALA A 174 UNP P0AEX9 ASN 199 CONFLICT SEQADV 4IKM ALA A 240 UNP P0AEX9 LYS 265 CONFLICT SEQADV 4IKM ALA A 360 UNP P0AEX9 GLU 385 CONFLICT SEQADV 4IKM ALA A 363 UNP P0AEX9 LYS 388 CONFLICT SEQADV 4IKM ALA A 364 UNP P0AEX9 ASP 389 CONFLICT SEQADV 4IKM ASN A 368 UNP P0AEX9 EXPRESSION TAG SEQADV 4IKM ALA A 369 UNP P0AEX9 EXPRESSION TAG SEQADV 4IKM VAL A 370 UNP P0AEX9 EXPRESSION TAG SEQADV 4IKM ASP A 371 UNP P0AEX9 EXPRESSION TAG SEQADV 4IKM ALA A 459 UNP Q9Y2G2 EXPRESSION TAG SEQADV 4IKM ALA A 460 UNP Q9Y2G2 EXPRESSION TAG SEQADV 4IKM ALA A 461 UNP Q9Y2G2 EXPRESSION TAG SEQADV 4IKM LEU A 462 UNP Q9Y2G2 EXPRESSION TAG SEQADV 4IKM GLU A 463 UNP Q9Y2G2 EXPRESSION TAG SEQADV 4IKM HIS A 464 UNP Q9Y2G2 EXPRESSION TAG SEQADV 4IKM HIS A 465 UNP Q9Y2G2 EXPRESSION TAG SEQADV 4IKM HIS A 466 UNP Q9Y2G2 EXPRESSION TAG SEQADV 4IKM HIS A 467 UNP Q9Y2G2 EXPRESSION TAG SEQADV 4IKM HIS A 468 UNP Q9Y2G2 EXPRESSION TAG SEQADV 4IKM HIS A 469 UNP Q9Y2G2 EXPRESSION TAG SEQRES 1 A 469 MET LYS ILE GLU GLU GLY LYS LEU VAL ILE TRP ILE ASN SEQRES 2 A 469 GLY ASP LYS GLY TYR ASN GLY LEU ALA GLU VAL GLY LYS SEQRES 3 A 469 LYS PHE GLU LYS ASP THR GLY ILE LYS VAL THR VAL GLU SEQRES 4 A 469 HIS PRO ASP LYS LEU GLU GLU LYS PHE PRO GLN VAL ALA SEQRES 5 A 469 ALA THR GLY ASP GLY PRO ASP ILE ILE PHE TRP ALA HIS SEQRES 6 A 469 ASP ARG PHE GLY GLY TYR ALA GLN SER GLY LEU LEU ALA SEQRES 7 A 469 GLU ILE THR PRO ALA ALA ALA PHE GLN ASP LYS LEU TYR SEQRES 8 A 469 PRO PHE THR TRP ASP ALA VAL ARG IYR ASN GLY LYS LEU SEQRES 9 A 469 ILE ALA TYR PRO ILE ALA VAL GLU ALA LEU SER LEU ILE SEQRES 10 A 469 TYR ASN LYS ASP LEU LEU PRO ASN PRO PRO LYS THR TRP SEQRES 11 A 469 GLU GLU ILE PRO ALA LEU ASP LYS GLU LEU LYS ALA LYS SEQRES 12 A 469 GLY LYS SER ALA LEU MET PHE ASN LEU GLN GLU PRO TYR SEQRES 13 A 469 PHE THR TRP PRO LEU ILE ALA ALA ASP GLY GLY TYR ALA SEQRES 14 A 469 PHE LYS TYI ALA ALA GLY LYS TYR ASP ILE LYS ASP VAL SEQRES 15 A 469 GLY VAL ASP ASN ALA GLY ALA LYS ALA GLY LEU THR PHE SEQRES 16 A 469 LEU VAL ASP LEU ILE LYS ASN LYS HIS MET ASN ALA ASP SEQRES 17 A 469 THR ASP TYI SER ILE ALA GLU ALA ALA PHE ASN LYS GLY SEQRES 18 A 469 GLU THR ALA MET THR ILE ASN GLY PRO TRP ALA TRP SER SEQRES 19 A 469 ASN ILE ASP THR SER ALA VAL ASN IYR GLY VAL THR VAL SEQRES 20 A 469 LEU PRO THR PHE LYS GLY GLN PRO SER LYS PRO PHE VAL SEQRES 21 A 469 GLY VAL LEU SER ALA GLY ILE ASN ALA ALA SER PRO ASN SEQRES 22 A 469 LYS GLU LEU ALA LYS GLU PHE LEU GLU ASN TYR LEU LEU SEQRES 23 A 469 THR ASP GLU GLY LEU GLU ALA VAL ASN LYS ASP LYS PRO SEQRES 24 A 469 LEU GLY ALA VAL ALA LEU LYS SER TYI GLU GLU GLU LEU SEQRES 25 A 469 ALA LYS ASP PRO ARG ILE ALA ALA THR MET GLU ASN ALA SEQRES 26 A 469 GLN LYS GLY GLU ILE MET PRO ASN ILE PRO GLN MET SER SEQRES 27 A 469 ALA PHE TRP TYI ALA VAL ARG THR ALA VAL ILE ASN ALA SEQRES 28 A 469 ALA SER GLY ARG GLN THR VAL ASP ALA ALA LEU ALA ALA SEQRES 29 A 469 ALA GLN THR ASN ALA VAL ASP ALA ALA PHE VAL LYS GLU SEQRES 30 A 469 ASN HIS ARG GLN LEU GLN ALA ARG MET GLY ASP LEU LYS SEQRES 31 A 469 GLY VAL LEU ASP ASP LEU GLN ASP ASN GLU VAL LEU THR SEQRES 32 A 469 GLU ASN GLU LYS GLU LEU VAL GLU GLN GLU LYS THR ARG SEQRES 33 A 469 GLN SER LYS ASN GLU ALA LEU LEU SER MET VAL GLU LYS SEQRES 34 A 469 LYS GLY ASP LEU ALA LEU ASP VAL LEU PHE ARG SER ILE SEQRES 35 A 469 SER GLU ARG ASP PRO TYI LEU VAL SER IYR LEU ARG GLN SEQRES 36 A 469 GLN ASN LEU ALA ALA ALA LEU GLU HIS HIS HIS HIS HIS SEQRES 37 A 469 HIS MODRES 4IKM IYR A 100 TYR 3-IODO-TYROSINE MODRES 4IKM TYI A 172 TYR 3,5-DIIODOTYROSINE MODRES 4IKM TYI A 211 TYR 3,5-DIIODOTYROSINE MODRES 4IKM IYR A 243 TYR 3-IODO-TYROSINE MODRES 4IKM TYI A 308 TYR 3,5-DIIODOTYROSINE MODRES 4IKM TYI A 342 TYR 3,5-DIIODOTYROSINE MODRES 4IKM TYI A 448 TYR 3,5-DIIODOTYROSINE MODRES 4IKM IYR A 452 TYR 3-IODO-TYROSINE HET IYR A 100 13 HET TYI A 172 14 HET TYI A 211 14 HET IYR A 243 13 HET TYI A 308 14 HET TYI A 342 14 HET TYI A 448 14 HET IYR A 452 13 HET GLC B 1 12 HET GLC B 2 11 HET IOD A 502 1 HET IOD A 503 1 HET EDO A 504 4 HET EDO A 505 4 HETNAM IYR 3-IODO-TYROSINE HETNAM TYI 3,5-DIIODOTYROSINE HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM IOD IODIDE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN EDO ETHYLENE GLYCOL FORMUL 1 IYR 3(C9 H10 I N O3) FORMUL 1 TYI 5(C9 H9 I2 N O3) FORMUL 2 GLC 2(C6 H12 O6) FORMUL 3 IOD 2(I 1-) FORMUL 5 EDO 2(C2 H6 O2) FORMUL 7 HOH *69(H2 O) HELIX 1 1 GLY A 17 GLY A 33 1 17 HELIX 2 2 LYS A 43 ALA A 53 1 11 HELIX 3 3 ARG A 67 SER A 74 1 8 HELIX 4 4 ALA A 83 ASP A 88 1 6 HELIX 5 5 TYR A 91 VAL A 98 1 8 HELIX 6 6 GLU A 132 LYS A 141 1 10 HELIX 7 7 ALA A 142 GLY A 144 5 3 HELIX 8 8 GLU A 154 ASP A 165 1 12 HELIX 9 9 ASN A 186 ASN A 202 1 17 HELIX 10 10 ASP A 210 LYS A 220 1 11 HELIX 11 11 GLY A 229 TRP A 231 5 3 HELIX 12 12 ALA A 232 SER A 239 1 8 HELIX 13 13 ASN A 273 TYR A 284 1 12 HELIX 14 14 THR A 287 LYS A 298 1 12 HELIX 15 15 LEU A 305 ALA A 313 1 9 HELIX 16 16 ASP A 315 LYS A 327 1 13 HELIX 17 17 GLN A 336 SER A 353 1 18 HELIX 18 18 THR A 357 ALA A 369 1 13 HELIX 19 19 VAL A 370 ASN A 378 1 9 HELIX 20 20 ASN A 378 MET A 386 1 9 HELIX 21 21 LEU A 389 ASN A 399 1 11 HELIX 22 22 THR A 403 GLU A 413 1 11 HELIX 23 23 THR A 415 LYS A 429 1 15 HELIX 24 24 GLY A 431 ASP A 446 1 16 HELIX 25 25 ASP A 446 GLU A 463 1 18 SHEET 1 A 6 LYS A 35 GLU A 39 0 SHEET 2 A 6 LYS A 7 TRP A 11 1 N ILE A 10 O GLU A 39 SHEET 3 A 6 ILE A 60 ALA A 64 1 O PHE A 62 N TRP A 11 SHEET 4 A 6 PHE A 259 ILE A 267 -1 O GLY A 266 N ILE A 61 SHEET 5 A 6 TYR A 107 GLU A 112 -1 N GLU A 112 O GLY A 261 SHEET 6 A 6 ALA A 302 VAL A 303 -1 O ALA A 302 N VAL A 111 SHEET 1 B 5 LYS A 35 GLU A 39 0 SHEET 2 B 5 LYS A 7 TRP A 11 1 N ILE A 10 O GLU A 39 SHEET 3 B 5 ILE A 60 ALA A 64 1 O PHE A 62 N TRP A 11 SHEET 4 B 5 PHE A 259 ILE A 267 -1 O GLY A 266 N ILE A 61 SHEET 5 B 5 GLU A 329 ILE A 330 1 O GLU A 329 N VAL A 260 SHEET 1 C 2 ARG A 99 IYR A 100 0 SHEET 2 C 2 LYS A 103 LEU A 104 -1 O LYS A 103 N IYR A 100 SHEET 1 D 4 SER A 146 LEU A 148 0 SHEET 2 D 4 THR A 223 ASN A 228 1 O ALA A 224 N SER A 146 SHEET 3 D 4 SER A 115 ASN A 119 -1 N ILE A 117 O THR A 226 SHEET 4 D 4 IYR A 243 THR A 246 -1 O THR A 246 N LEU A 116 SHEET 1 E 2 TYR A 168 TYI A 172 0 SHEET 2 E 2 TYR A 177 GLY A 183 -1 O ASP A 178 N LYS A 171 LINK C ARG A 99 N IYR A 100 1555 1555 1.33 LINK C IYR A 100 N ASN A 101 1555 1555 1.33 LINK C LYS A 171 N TYI A 172 1555 1555 1.33 LINK C TYI A 172 N ALA A 173 1555 1555 1.33 LINK C ASP A 210 N TYI A 211 1555 1555 1.33 LINK C TYI A 211 N SER A 212 1555 1555 1.33 LINK C ASN A 242 N IYR A 243 1555 1555 1.33 LINK C IYR A 243 N GLY A 244 1555 1555 1.33 LINK C SER A 307 N TYI A 308 1555 1555 1.33 LINK C TYI A 308 N GLU A 309 1555 1555 1.33 LINK C TRP A 341 N TYI A 342 1555 1555 1.33 LINK C TYI A 342 N ALA A 343 1555 1555 1.33 LINK C PRO A 447 N TYI A 448 1555 1555 1.33 LINK C TYI A 448 N LEU A 449 1555 1555 1.33 LINK C SER A 451 N IYR A 452 1555 1555 1.33 LINK C IYR A 452 N LEU A 453 1555 1555 1.33 LINK O4 GLC B 1 C1 GLC B 2 1555 1555 1.36 CRYST1 94.877 94.877 219.390 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010540 0.006085 0.000000 0.00000 SCALE2 0.000000 0.012171 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004558 0.00000