HEADER HYDROLASE 28-DEC-12 4IL3 TITLE CRYSTAL STRUCTURE OF S. MIKATAE STE24P COMPND MOL_ID: 1; COMPND 2 MOLECULE: STE24P; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.4.24.84; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES MIKATAE; SOURCE 3 ORGANISM_TAXID: 114525; SOURCE 4 STRAIN: IFO 1815T; SOURCE 5 EXPRESSION_SYSTEM: SACCHAROMYCES CEREVISIAE; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 4932; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BJ5460; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PSGP46 KEYWDS MEMBRANE PROTEIN, ALPHA HELICAL, CAAX PROTEASE, A-FACTOR, STRUCTURAL KEYWDS 2 GENOMICS, MPSBC, PSI-BIOLOGY, MEMBRANE PROTEIN STRUCTURAL BIOLOGY KEYWDS 3 CONSORTIUM, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR E.E.PRYOR JR.,P.S.HORANYI,K.CLARK,N.FEDORIW,S.M.CONNELLY,M.KOSZELAK- AUTHOR 2 ROSENBLUM,G.ZHU,M.G.MALKOWSKI,M.E.DUMONT,M.C.WIENER,MEMBRANE PROTEIN AUTHOR 3 STRUCTURAL BIOLOGY CONSORTIUM (MPSBC) REVDAT 5 20-SEP-23 4IL3 1 REMARK LINK REVDAT 4 15-NOV-17 4IL3 1 REMARK REVDAT 3 19-JUN-13 4IL3 1 JRNL REVDAT 2 03-APR-13 4IL3 1 JRNL REVDAT 1 20-FEB-13 4IL3 0 JRNL AUTH E.E.PRYOR,P.S.HORANYI,K.M.CLARK,N.FEDORIW,S.M.CONNELLY, JRNL AUTH 2 M.KOSZELAK-ROSENBLUM,G.ZHU,M.G.MALKOWSKI,M.C.WIENER, JRNL AUTH 3 M.E.DUMONT JRNL TITL STRUCTURE OF THE INTEGRAL MEMBRANE PROTEIN CAAX PROTEASE JRNL TITL 2 STE24P. JRNL REF SCIENCE V. 339 1600 2013 JRNL REFN ISSN 0036-8075 JRNL PMID 23539602 JRNL DOI 10.1126/SCIENCE.1232048 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.45 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 60.0 REMARK 3 NUMBER OF REFLECTIONS : 24941 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.271 REMARK 3 R VALUE (WORKING SET) : 0.270 REMARK 3 FREE R VALUE : 0.293 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 1241 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.4552 - 6.4469 0.99 4381 255 0.2404 0.2587 REMARK 3 2 6.4469 - 5.1190 0.96 4201 245 0.2958 0.3187 REMARK 3 3 5.1190 - 4.4724 0.95 4212 201 0.2514 0.2696 REMARK 3 4 4.4724 - 4.0637 0.88 3865 189 0.2793 0.2921 REMARK 3 5 4.0637 - 3.7726 0.57 2480 124 0.2821 0.3083 REMARK 3 6 3.7726 - 3.5502 0.39 1704 89 0.3029 0.4114 REMARK 3 7 3.5502 - 3.3725 0.28 1241 58 0.3126 0.3359 REMARK 3 8 3.3725 - 3.2257 0.22 944 52 0.3376 0.4151 REMARK 3 9 3.2257 - 3.1015 0.15 672 28 0.3682 0.2493 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.410 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 37.220 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 90.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 7176 REMARK 3 ANGLE : 0.778 9731 REMARK 3 CHIRALITY : 0.041 1106 REMARK 3 PLANARITY : 0.005 1189 REMARK 3 DIHEDRAL : 13.104 2568 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 10:221) REMARK 3 ORIGIN FOR THE GROUP (A): 59.9165 -25.2924 33.5634 REMARK 3 T TENSOR REMARK 3 T11: 1.0898 T22: 0.8552 REMARK 3 T33: 0.3786 T12: 0.0454 REMARK 3 T13: 0.0453 T23: 0.0261 REMARK 3 L TENSOR REMARK 3 L11: 1.3681 L22: 1.8333 REMARK 3 L33: 2.9893 L12: -0.2405 REMARK 3 L13: -0.0387 L23: 0.3127 REMARK 3 S TENSOR REMARK 3 S11: -0.0874 S12: -0.0946 S13: 0.0655 REMARK 3 S21: 0.2417 S22: 0.1816 S23: 0.2095 REMARK 3 S31: -0.7489 S32: -0.3573 S33: -0.0302 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 222:304) REMARK 3 ORIGIN FOR THE GROUP (A): 65.9150 -31.2261 6.4596 REMARK 3 T TENSOR REMARK 3 T11: 1.1340 T22: 0.8797 REMARK 3 T33: 0.2906 T12: -0.0015 REMARK 3 T13: -0.1195 T23: -0.0130 REMARK 3 L TENSOR REMARK 3 L11: 4.1608 L22: 2.8493 REMARK 3 L33: 7.5349 L12: 0.8899 REMARK 3 L13: -4.7193 L23: 1.1033 REMARK 3 S TENSOR REMARK 3 S11: 0.1162 S12: 0.6697 S13: -0.1736 REMARK 3 S21: -0.8899 S22: 0.0631 S23: 0.1374 REMARK 3 S31: 0.5721 S32: -0.0279 S33: -0.1212 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 306:445) REMARK 3 ORIGIN FOR THE GROUP (A): 71.2589 -21.2183 28.8759 REMARK 3 T TENSOR REMARK 3 T11: 1.4326 T22: 0.5866 REMARK 3 T33: 0.3099 T12: 0.0313 REMARK 3 T13: -0.0764 T23: -0.0378 REMARK 3 L TENSOR REMARK 3 L11: 0.7456 L22: 0.5756 REMARK 3 L33: 1.7082 L12: 0.0764 REMARK 3 L13: -0.0725 L23: 0.1196 REMARK 3 S TENSOR REMARK 3 S11: -0.0470 S12: -0.0847 S13: 0.3068 REMARK 3 S21: 0.3150 S22: -0.1672 S23: 0.0995 REMARK 3 S31: -0.3259 S32: -0.1573 S33: 0.1794 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN B AND RESID 13:221) REMARK 3 ORIGIN FOR THE GROUP (A): 102.5415 -60.7145 22.1585 REMARK 3 T TENSOR REMARK 3 T11: 0.7926 T22: 1.0212 REMARK 3 T33: 0.3712 T12: 0.1159 REMARK 3 T13: 0.0802 T23: -0.0639 REMARK 3 L TENSOR REMARK 3 L11: 3.0651 L22: 2.3932 REMARK 3 L33: 0.5689 L12: -0.8787 REMARK 3 L13: 0.1270 L23: -0.0425 REMARK 3 S TENSOR REMARK 3 S11: 0.0944 S12: -0.0225 S13: -0.1951 REMARK 3 S21: -0.1750 S22: 0.0279 S23: -0.0647 REMARK 3 S31: 0.2098 S32: 0.7461 S33: -0.1175 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN B AND RESID 222:304) REMARK 3 ORIGIN FOR THE GROUP (A): 93.2318 -63.9932 49.4872 REMARK 3 T TENSOR REMARK 3 T11: 1.0796 T22: 1.3835 REMARK 3 T33: 0.5136 T12: 0.0432 REMARK 3 T13: 0.0063 T23: -0.0836 REMARK 3 L TENSOR REMARK 3 L11: 6.3019 L22: 8.9557 REMARK 3 L33: 2.6619 L12: -4.5810 REMARK 3 L13: -3.9496 L23: 2.4267 REMARK 3 S TENSOR REMARK 3 S11: 0.5247 S12: 0.3551 S13: -0.9709 REMARK 3 S21: -0.1493 S22: -0.8135 S23: 0.8039 REMARK 3 S31: -0.3235 S32: 0.4024 S33: 0.1784 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN B AND RESID 306:445) REMARK 3 ORIGIN FOR THE GROUP (A): 98.8330 -49.8771 27.2347 REMARK 3 T TENSOR REMARK 3 T11: 0.7747 T22: 0.7682 REMARK 3 T33: 0.3850 T12: 0.0251 REMARK 3 T13: 0.0605 T23: 0.0012 REMARK 3 L TENSOR REMARK 3 L11: 2.6536 L22: 1.6193 REMARK 3 L33: 0.5846 L12: -0.7958 REMARK 3 L13: -1.1458 L23: 0.1192 REMARK 3 S TENSOR REMARK 3 S11: -0.0593 S12: 0.5781 S13: -0.0718 REMARK 3 S21: 0.0445 S22: -0.0462 S23: 0.0605 REMARK 3 S31: 0.0713 S32: 0.7738 S33: 0.0845 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4IL3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1000076887. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-AUG-12 REMARK 200 TEMPERATURE (KELVIN) : 90 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.27 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26917 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -4.100 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 64.8 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.13100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 17.5 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.43500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.290 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD, MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER, RESOLVE, PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 4AW6 REMARK 200 REMARK 200 REMARK: MR/SAD USING ZN ANOMALOUS SIGNAL AND 4AW6 STRUCTURE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 77.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG 20,000, 20% PEG 550MME, 5 MM REMARK 280 1,6-HEXANEDIOL, 5 MM 1-BUTANOL, 5 MM (RS)-1,2-PROPANEDIOL, 5 MM REMARK 280 2-PROPANOL, 5 MM 1,4-BUTANEDIOL, 5 MM 1,3-PROPANEDIOL, 100 MM REMARK 280 MOPS / NA-HEPES PH 7.5, VAPOR DIFFUSION, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 131.34933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 65.67467 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 98.51200 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 32.83733 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 164.18667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL UNIT IS A MONOMER. THERE ARE TWO BIOLOGICAL REMARK 300 UNITS IN THE ASYMMETRIC UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PHE A 2 REMARK 465 ASP A 3 REMARK 465 LEU A 4 REMARK 465 LYS A 5 REMARK 465 LYS A 6 REMARK 465 ILE A 7 REMARK 465 LEU A 8 REMARK 465 VAL A 107 REMARK 465 LEU A 108 REMARK 465 PRO A 109 REMARK 465 VAL A 110 REMARK 465 ARG A 111 REMARK 465 PHE A 112 REMARK 465 HIS A 113 REMARK 465 GLY A 339 REMARK 465 PHE A 340 REMARK 465 PHE A 341 REMARK 465 VAL A 342 REMARK 465 GLU A 343 REMARK 465 LYS A 344 REMARK 465 SER A 345 REMARK 465 SER A 346 REMARK 465 TYR A 446 REMARK 465 VAL A 447 REMARK 465 SER A 448 REMARK 465 GLU A 449 REMARK 465 LYS A 450 REMARK 465 LYS A 451 REMARK 465 LYS A 452 REMARK 465 ASN A 453 REMARK 465 SER A 454 REMARK 465 GLY A 455 REMARK 465 LEU A 456 REMARK 465 GLU A 457 REMARK 465 VAL A 458 REMARK 465 LEU A 459 REMARK 465 PHE A 460 REMARK 465 GLN A 461 REMARK 465 MET B 1 REMARK 465 PHE B 2 REMARK 465 ASP B 3 REMARK 465 LEU B 4 REMARK 465 LYS B 5 REMARK 465 LYS B 6 REMARK 465 ILE B 7 REMARK 465 LEU B 8 REMARK 465 ASP B 9 REMARK 465 ARG B 10 REMARK 465 SER B 104 REMARK 465 ASN B 105 REMARK 465 ALA B 106 REMARK 465 VAL B 107 REMARK 465 LEU B 108 REMARK 465 VAL B 447 REMARK 465 SER B 448 REMARK 465 GLU B 449 REMARK 465 LYS B 450 REMARK 465 LYS B 451 REMARK 465 LYS B 452 REMARK 465 ASN B 453 REMARK 465 SER B 454 REMARK 465 GLY B 455 REMARK 465 LEU B 456 REMARK 465 GLU B 457 REMARK 465 VAL B 458 REMARK 465 LEU B 459 REMARK 465 PHE B 460 REMARK 465 GLN B 461 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O THR B 288 N GLU B 290 1.99 REMARK 500 NE2 HIS A 297 OE1 GLU A 390 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 14 95.20 -69.92 REMARK 500 LEU A 103 52.94 -97.58 REMARK 500 VAL A 115 46.95 -101.13 REMARK 500 VAL A 146 -62.33 -141.93 REMARK 500 LEU A 247 106.54 -165.25 REMARK 500 ASN A 284 177.12 -58.83 REMARK 500 ASN A 286 -45.73 -130.94 REMARK 500 ASP A 289 13.22 -145.31 REMARK 500 PHE A 334 -167.70 -69.34 REMARK 500 THR A 337 72.76 56.71 REMARK 500 PHE A 349 4.31 113.50 REMARK 500 PRO A 352 70.61 17.42 REMARK 500 LYS A 356 -151.66 91.99 REMARK 500 MET A 421 -73.42 -80.99 REMARK 500 LEU A 444 -75.72 -115.44 REMARK 500 ASP B 91 73.00 43.76 REMARK 500 HIS B 113 56.31 -154.44 REMARK 500 SER B 116 -70.24 -110.18 REMARK 500 THR B 117 -174.73 -63.79 REMARK 500 VAL B 146 -62.07 -141.96 REMARK 500 LEU B 247 112.62 -162.95 REMARK 500 PHE B 271 38.33 79.48 REMARK 500 ASN B 284 -83.62 -61.59 REMARK 500 ASP B 289 -56.99 57.23 REMARK 500 GLU B 290 69.38 142.89 REMARK 500 ASN B 331 136.29 -35.26 REMARK 500 PHE B 334 -70.23 -69.67 REMARK 500 LYS B 344 54.79 74.38 REMARK 500 SER B 346 -168.57 -127.56 REMARK 500 SER B 347 7.55 87.04 REMARK 500 VAL B 350 114.60 -37.96 REMARK 500 GLU B 357 -134.54 38.86 REMARK 500 MET B 421 -72.47 -81.92 REMARK 500 ASP B 445 6.74 89.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 297 NE2 REMARK 620 2 HIS A 301 NE2 111.5 REMARK 620 3 GLU A 390 OE1 62.4 124.9 REMARK 620 4 GLU A 390 OE2 127.9 98.2 65.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 297 NE2 REMARK 620 2 HIS B 301 NE2 131.9 REMARK 620 3 GLU B 390 OE1 67.7 129.2 REMARK 620 4 GLU B 390 OE2 132.7 84.6 65.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MPSBC-STE24PSM RELATED DB: TARGETTRACK DBREF 4IL3 A 1 461 PDB 4IL3 4IL3 1 461 DBREF 4IL3 B 1 461 PDB 4IL3 4IL3 1 461 SEQRES 1 A 461 MET PHE ASP LEU LYS LYS ILE LEU ASP ARG PRO THR ILE SEQRES 2 A 461 PRO TRP LYS LEU ILE ILE SER ALA PHE SER ILE ALA GLN SEQRES 3 A 461 PHE SER PHE GLU SER TYR LEU THR TYR ARG GLN TYR GLN SEQRES 4 A 461 LYS LEU SER GLU THR LYS LEU PRO PRO VAL LEU GLU ASP SEQRES 5 A 461 GLU ILE ASP ASP GLU THR PHE HIS LYS SER ARG ASN TYR SEQRES 6 A 461 SER ARG ALA LYS ALA LYS PHE SER ILE PHE SER ASP ILE SEQRES 7 A 461 TYR ASN LEU ALA GLN LYS LEU VAL PHE ILE LYS TYR ASP SEQRES 8 A 461 PHE PHE PRO LYS ILE TRP HIS MET ALA VAL THR LEU SER SEQRES 9 A 461 ASN ALA VAL LEU PRO VAL ARG PHE HIS MET VAL SER THR SEQRES 10 A 461 VAL ALA GLN SER LEU CYS PHE LEU GLY LEU LEU SER SER SEQRES 11 A 461 MET SER THR LEU VAL ASP LEU PRO LEU SER TYR TYR SER SEQRES 12 A 461 HIS PHE VAL LEU GLU GLU LYS PHE GLY PHE ASN LYS LEU SEQRES 13 A 461 THR VAL LYS LEU TRP ILE THR ASP MET ILE LYS SER LEU SEQRES 14 A 461 THR LEU ALA TYR ALA ILE GLY GLY PRO ILE LEU TYR LEU SEQRES 15 A 461 PHE LEU LYS ILE PHE ASP LYS PHE PRO THR ASP PHE LEU SEQRES 16 A 461 TRP TYR ILE MET VAL PHE LEU PHE VAL VAL GLN ILE LEU SEQRES 17 A 461 ALA MET THR ILE ILE PRO VAL PHE ILE MET PRO LEU PHE SEQRES 18 A 461 ASN LYS PHE THR PRO LEU GLU ASP GLY GLU LEU LYS LYS SEQRES 19 A 461 SER ILE GLU SER LEU ALA ASP ARG VAL GLY PHE PRO LEU SEQRES 20 A 461 ASP LYS ILE PHE VAL ILE ASP GLY SER LYS ARG SER SER SEQRES 21 A 461 HIS SER ASN ALA TYR PHE THR GLY LEU PRO PHE THR SER SEQRES 22 A 461 LYS ARG ILE VAL LEU PHE ASP THR LEU VAL ASN SER ASN SEQRES 23 A 461 SER THR ASP GLU ILE THR ALA VAL LEU ALA HIS GLU ILE SEQRES 24 A 461 GLY HIS TRP GLN LYS ASN HIS ILE VAL ASN MET VAL ILE SEQRES 25 A 461 PHE SER GLN LEU HIS THR PHE LEU ILE PHE SER LEU PHE SEQRES 26 A 461 THR SER ILE TYR ARG ASN SER SER PHE TYR ASN THR PHE SEQRES 27 A 461 GLY PHE PHE VAL GLU LYS SER SER SER GLY PHE VAL ASP SEQRES 28 A 461 PRO VAL ILE THR LYS GLU PHE PRO ILE ILE ILE GLY PHE SEQRES 29 A 461 MET LEU PHE ASN ASP LEU LEU THR PRO LEU GLU CYS ALA SEQRES 30 A 461 MET GLN PHE ILE MET SER LEU ILE SER ARG THR HIS GLU SEQRES 31 A 461 TYR GLN ALA ASP ALA TYR ALA LYS LYS LEU GLY TYR LYS SEQRES 32 A 461 GLN ASN LEU CYS ARG ALA LEU ILE ASP LEU GLN ILE LYS SEQRES 33 A 461 ASN LEU SER THR MET ASN VAL ASP PRO LEU TYR SER SER SEQRES 34 A 461 TYR HIS TYR SER HIS PRO THR LEU ALA GLU ARG LEU THR SEQRES 35 A 461 ALA LEU ASP TYR VAL SER GLU LYS LYS LYS ASN SER GLY SEQRES 36 A 461 LEU GLU VAL LEU PHE GLN SEQRES 1 B 461 MET PHE ASP LEU LYS LYS ILE LEU ASP ARG PRO THR ILE SEQRES 2 B 461 PRO TRP LYS LEU ILE ILE SER ALA PHE SER ILE ALA GLN SEQRES 3 B 461 PHE SER PHE GLU SER TYR LEU THR TYR ARG GLN TYR GLN SEQRES 4 B 461 LYS LEU SER GLU THR LYS LEU PRO PRO VAL LEU GLU ASP SEQRES 5 B 461 GLU ILE ASP ASP GLU THR PHE HIS LYS SER ARG ASN TYR SEQRES 6 B 461 SER ARG ALA LYS ALA LYS PHE SER ILE PHE SER ASP ILE SEQRES 7 B 461 TYR ASN LEU ALA GLN LYS LEU VAL PHE ILE LYS TYR ASP SEQRES 8 B 461 PHE PHE PRO LYS ILE TRP HIS MET ALA VAL THR LEU SER SEQRES 9 B 461 ASN ALA VAL LEU PRO VAL ARG PHE HIS MET VAL SER THR SEQRES 10 B 461 VAL ALA GLN SER LEU CYS PHE LEU GLY LEU LEU SER SER SEQRES 11 B 461 MET SER THR LEU VAL ASP LEU PRO LEU SER TYR TYR SER SEQRES 12 B 461 HIS PHE VAL LEU GLU GLU LYS PHE GLY PHE ASN LYS LEU SEQRES 13 B 461 THR VAL LYS LEU TRP ILE THR ASP MET ILE LYS SER LEU SEQRES 14 B 461 THR LEU ALA TYR ALA ILE GLY GLY PRO ILE LEU TYR LEU SEQRES 15 B 461 PHE LEU LYS ILE PHE ASP LYS PHE PRO THR ASP PHE LEU SEQRES 16 B 461 TRP TYR ILE MET VAL PHE LEU PHE VAL VAL GLN ILE LEU SEQRES 17 B 461 ALA MET THR ILE ILE PRO VAL PHE ILE MET PRO LEU PHE SEQRES 18 B 461 ASN LYS PHE THR PRO LEU GLU ASP GLY GLU LEU LYS LYS SEQRES 19 B 461 SER ILE GLU SER LEU ALA ASP ARG VAL GLY PHE PRO LEU SEQRES 20 B 461 ASP LYS ILE PHE VAL ILE ASP GLY SER LYS ARG SER SER SEQRES 21 B 461 HIS SER ASN ALA TYR PHE THR GLY LEU PRO PHE THR SER SEQRES 22 B 461 LYS ARG ILE VAL LEU PHE ASP THR LEU VAL ASN SER ASN SEQRES 23 B 461 SER THR ASP GLU ILE THR ALA VAL LEU ALA HIS GLU ILE SEQRES 24 B 461 GLY HIS TRP GLN LYS ASN HIS ILE VAL ASN MET VAL ILE SEQRES 25 B 461 PHE SER GLN LEU HIS THR PHE LEU ILE PHE SER LEU PHE SEQRES 26 B 461 THR SER ILE TYR ARG ASN SER SER PHE TYR ASN THR PHE SEQRES 27 B 461 GLY PHE PHE VAL GLU LYS SER SER SER GLY PHE VAL ASP SEQRES 28 B 461 PRO VAL ILE THR LYS GLU PHE PRO ILE ILE ILE GLY PHE SEQRES 29 B 461 MET LEU PHE ASN ASP LEU LEU THR PRO LEU GLU CYS ALA SEQRES 30 B 461 MET GLN PHE ILE MET SER LEU ILE SER ARG THR HIS GLU SEQRES 31 B 461 TYR GLN ALA ASP ALA TYR ALA LYS LYS LEU GLY TYR LYS SEQRES 32 B 461 GLN ASN LEU CYS ARG ALA LEU ILE ASP LEU GLN ILE LYS SEQRES 33 B 461 ASN LEU SER THR MET ASN VAL ASP PRO LEU TYR SER SER SEQRES 34 B 461 TYR HIS TYR SER HIS PRO THR LEU ALA GLU ARG LEU THR SEQRES 35 B 461 ALA LEU ASP TYR VAL SER GLU LYS LYS LYS ASN SER GLY SEQRES 36 B 461 LEU GLU VAL LEU PHE GLN HET ZN A 501 1 HET ZN B 501 1 HETNAM ZN ZINC ION FORMUL 3 ZN 2(ZN 2+) HELIX 1 1 PRO A 14 THR A 44 1 31 HELIX 2 2 ASP A 55 TYR A 90 1 36 HELIX 3 3 PHE A 92 LEU A 103 1 12 HELIX 4 4 GLN A 120 VAL A 146 1 27 HELIX 5 5 THR A 157 PHE A 190 1 34 HELIX 6 6 PHE A 194 PHE A 216 1 23 HELIX 7 7 ILE A 217 ASN A 222 1 6 HELIX 8 8 GLY A 230 GLY A 244 1 15 HELIX 9 9 ASP A 280 ASN A 284 1 5 HELIX 10 10 GLU A 290 LYS A 304 1 15 HELIX 11 11 ASN A 305 THR A 326 1 22 HELIX 12 12 PRO A 359 LEU A 371 1 13 HELIX 13 13 LEU A 371 LEU A 400 1 30 HELIX 14 14 TYR A 402 LEU A 418 1 17 HELIX 15 15 ASP A 424 HIS A 431 1 8 HELIX 16 16 THR A 436 ALA A 443 1 8 HELIX 17 17 PRO B 14 THR B 44 1 31 HELIX 18 18 ASP B 55 TYR B 90 1 36 HELIX 19 19 ASP B 91 THR B 102 1 12 HELIX 20 20 ALA B 119 VAL B 146 1 28 HELIX 21 21 THR B 157 PHE B 190 1 34 HELIX 22 22 PHE B 194 ILE B 213 1 20 HELIX 23 23 ILE B 217 PHE B 221 5 5 HELIX 24 24 GLY B 230 GLY B 244 1 15 HELIX 25 25 ASP B 280 SER B 285 1 6 HELIX 26 26 ILE B 291 LYS B 304 1 14 HELIX 27 27 ASN B 305 THR B 326 1 22 HELIX 28 28 ASN B 331 PHE B 338 1 8 HELIX 29 29 PRO B 359 LEU B 371 1 13 HELIX 30 30 LEU B 371 LEU B 400 1 30 HELIX 31 31 TYR B 402 LEU B 418 1 17 HELIX 32 32 ASP B 424 HIS B 431 1 8 HELIX 33 33 THR B 436 ALA B 443 1 8 SHEET 1 A 4 PHE A 224 PRO A 226 0 SHEET 2 A 4 LYS A 249 ILE A 253 -1 O VAL A 252 N THR A 225 SHEET 3 A 4 ARG A 275 PHE A 279 1 O LEU A 278 N PHE A 251 SHEET 4 A 4 ALA A 264 THR A 267 -1 N TYR A 265 O VAL A 277 SHEET 1 B 4 PHE B 224 PRO B 226 0 SHEET 2 B 4 ILE B 250 ILE B 253 -1 O VAL B 252 N THR B 225 SHEET 3 B 4 ARG B 275 PHE B 279 1 O ILE B 276 N PHE B 251 SHEET 4 B 4 ALA B 264 THR B 267 -1 N TYR B 265 O VAL B 277 SHEET 1 C 2 PHE B 341 VAL B 342 0 SHEET 2 C 2 VAL B 353 ILE B 354 1 O ILE B 354 N PHE B 341 LINK NE2 HIS A 297 ZN ZN A 501 1555 1555 2.10 LINK NE2 HIS A 301 ZN ZN A 501 1555 1555 2.03 LINK OE1 GLU A 390 ZN ZN A 501 1555 1555 2.01 LINK OE2 GLU A 390 ZN ZN A 501 1555 1555 2.02 LINK NE2 HIS B 297 ZN ZN B 501 1555 1555 2.09 LINK NE2 HIS B 301 ZN ZN B 501 1555 1555 2.12 LINK OE1 GLU B 390 ZN ZN B 501 1555 1555 2.01 LINK OE2 GLU B 390 ZN ZN B 501 1555 1555 2.04 CISPEP 1 PRO A 270 PHE A 271 0 -6.86 CISPEP 2 LEU B 269 PRO B 270 0 -5.33 SITE 1 AC1 3 HIS A 297 HIS A 301 GLU A 390 SITE 1 AC2 4 HIS B 297 GLU B 298 HIS B 301 GLU B 390 CRYST1 143.530 143.530 197.024 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006967 0.004023 0.000000 0.00000 SCALE2 0.000000 0.008045 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005076 0.00000