HEADER SPLICING 31-DEC-12 4ILG TITLE CRYSTAL STRUCTURE OF AAR2P IN COMPLEX WITH THE PRP8P RNASEH AND TITLE 2 JAB1/MPN DOMAINS COMPND MOL_ID: 1; COMPND 2 MOLECULE: A1 CISTRON-SPLICING FACTOR AAR2; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: PRE-MRNA-SPLICING FACTOR 8; COMPND 8 CHAIN: B; COMPND 9 FRAGMENT: YPRP8 RNASEH (UNP RESIDUES 1835-2090); COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: PRE-MRNA-SPLICING FACTOR 8; COMPND 13 CHAIN: C; COMPND 14 FRAGMENT: YPRP8 JAB1/MPN (UNP RESIDUES 2147-2413); COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 STRAIN: ATCC 204508 / S288C; SOURCE 6 GENE: AAR2, YBL074C, YBL06.06, YBL0611; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 11 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 12 ORGANISM_TAXID: 559292; SOURCE 13 STRAIN: ATCC 204508 / S288C; SOURCE 14 GENE: PRP8, DBF3, DNA39, RNA8, SLT21, USA2, YHR165C; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 19 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 20 ORGANISM_TAXID: 559292; SOURCE 21 STRAIN: ATCC 204508 / S288C; SOURCE 22 GENE: PRP8, DBF3, DNA39, RNA8, SLT21, USA2, YHR165C; SOURCE 23 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 24 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS U5 SNRNP ASSEMBLY, AAR2, PRP8, SPLICING EXPDTA X-RAY DIFFRACTION AUTHOR G.WEBER,A.C.HEROVEN,K.F.SANTOS,M.C.WAHL REVDAT 4 20-SEP-23 4ILG 1 REMARK SEQADV REVDAT 3 19-JUN-13 4ILG 1 TITLE REVDAT 2 27-MAR-13 4ILG 1 JRNL REVDAT 1 13-MAR-13 4ILG 0 JRNL AUTH G.WEBER,V.F.CRISTAO,K.F.SANTOS,S.M.JOVIN,A.C.HEROVEN, JRNL AUTH 2 N.HOLTON,R.LUHRMANN,J.D.BEGGS,M.C.WAHL JRNL TITL STRUCTURAL BASIS FOR DUAL ROLES OF AAR2P IN U5 SNRNP JRNL TITL 2 ASSEMBLY. JRNL REF GENES DEV. V. 27 525 2013 JRNL REFN ISSN 0890-9369 JRNL PMID 23442228 JRNL DOI 10.1101/GAD.213207.113 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.87 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 68667 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.460 REMARK 3 FREE R VALUE TEST SET COUNT : 3063 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.8732 - 5.8725 0.99 3083 147 0.1563 0.1801 REMARK 3 2 5.8725 - 4.6659 0.99 3037 141 0.1465 0.1842 REMARK 3 3 4.6659 - 4.0775 1.00 2992 141 0.1305 0.1962 REMARK 3 4 4.0775 - 3.7053 1.00 3007 136 0.1426 0.1588 REMARK 3 5 3.7053 - 3.4400 0.99 2993 138 0.1602 0.1971 REMARK 3 6 3.4400 - 3.2374 1.00 2957 140 0.1661 0.2132 REMARK 3 7 3.2374 - 3.0754 1.00 3020 138 0.1717 0.2196 REMARK 3 8 3.0754 - 2.9417 1.00 2967 136 0.1805 0.2499 REMARK 3 9 2.9417 - 2.8285 1.00 2984 138 0.1909 0.2636 REMARK 3 10 2.8285 - 2.7309 1.00 2964 150 0.1921 0.2684 REMARK 3 11 2.7309 - 2.6456 1.00 2962 137 0.1891 0.2349 REMARK 3 12 2.6456 - 2.5700 1.00 3006 134 0.1835 0.2516 REMARK 3 13 2.5700 - 2.5024 1.00 2965 135 0.2051 0.3005 REMARK 3 14 2.5024 - 2.4413 1.00 2988 147 0.1993 0.2429 REMARK 3 15 2.4413 - 2.3859 1.00 2968 139 0.2078 0.2405 REMARK 3 16 2.3859 - 2.3351 1.00 2940 164 0.2163 0.2992 REMARK 3 17 2.3351 - 2.2884 1.00 2973 123 0.2549 0.3346 REMARK 3 18 2.2884 - 2.2452 0.98 2937 114 0.3605 0.4053 REMARK 3 19 2.2452 - 2.2051 1.00 2938 148 0.2508 0.2862 REMARK 3 20 2.2051 - 2.1678 1.00 2955 140 0.2497 0.3068 REMARK 3 21 2.1678 - 2.1328 1.00 2977 138 0.2685 0.2941 REMARK 3 22 2.1328 - 2.1000 1.00 2991 139 0.2932 0.3462 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.98 REMARK 3 K_SOL : 0.29 REMARK 3 B_SOL : 46.56 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.770 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.89210 REMARK 3 B22 (A**2) : -3.62020 REMARK 3 B33 (A**2) : 4.51230 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -7.28630 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 7019 REMARK 3 ANGLE : 1.181 9536 REMARK 3 CHIRALITY : 0.082 1039 REMARK 3 PLANARITY : 0.005 1225 REMARK 3 DIHEDRAL : 14.710 2635 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' REMARK 3 ORIGIN FOR THE GROUP (A): -27.2562 -26.6528 -46.0088 REMARK 3 T TENSOR REMARK 3 T11: 0.5094 T22: 0.1122 REMARK 3 T33: 0.0619 T12: -0.0560 REMARK 3 T13: -0.2145 T23: -0.0537 REMARK 3 L TENSOR REMARK 3 L11: 0.5618 L22: 0.8598 REMARK 3 L33: 1.1152 L12: 0.2958 REMARK 3 L13: 0.7232 L23: 0.5668 REMARK 3 S TENSOR REMARK 3 S11: -0.1000 S12: 0.2484 S13: 0.0064 REMARK 3 S21: -0.5712 S22: 0.1162 S23: 0.1071 REMARK 3 S31: 0.0022 S32: 0.1006 S33: -0.1177 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B AND RESID 1834:2085 REMARK 3 ORIGIN FOR THE GROUP (A): -9.6600 6.6454 -19.4523 REMARK 3 T TENSOR REMARK 3 T11: 0.0687 T22: 0.0665 REMARK 3 T33: 0.1018 T12: 0.0289 REMARK 3 T13: -0.0078 T23: -0.0321 REMARK 3 L TENSOR REMARK 3 L11: 1.1007 L22: 2.2362 REMARK 3 L33: 0.7303 L12: 0.2074 REMARK 3 L13: 0.3838 L23: -0.0895 REMARK 3 S TENSOR REMARK 3 S11: -0.0212 S12: 0.0906 S13: -0.0011 REMARK 3 S21: -0.1270 S22: 0.0559 S23: -0.1602 REMARK 3 S31: 0.0061 S32: 0.1254 S33: -0.0083 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C AND RESID 2148:2392 REMARK 3 ORIGIN FOR THE GROUP (A): 28.1808 11.8386 -8.6863 REMARK 3 T TENSOR REMARK 3 T11: -0.0127 T22: 0.3188 REMARK 3 T33: 0.1640 T12: 0.0488 REMARK 3 T13: 0.0344 T23: -0.0350 REMARK 3 L TENSOR REMARK 3 L11: 2.3685 L22: 2.1531 REMARK 3 L33: 1.7175 L12: -0.6765 REMARK 3 L13: -0.0024 L23: 0.2818 REMARK 3 S TENSOR REMARK 3 S11: -0.0284 S12: 0.2786 S13: 0.0278 REMARK 3 S21: 0.0384 S22: -0.0324 S23: -0.3492 REMARK 3 S31: -0.0116 S32: 0.3683 S33: -0.0700 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4ILG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1000076900. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : SI-111 CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68679 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 34.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.600 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.20700 REMARK 200 R SYM (I) : 0.09000 REMARK 200 FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 1.15400 REMARK 200 R SYM FOR SHELL (I) : 0.86100 REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3SBT, 2OG4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES-NAOH, PH 7.5, 12 % (W/V) REMARK 280 PEG 6000 AND 0.6 M KCL, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 31.86950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 318 REMARK 465 LYS A 319 REMARK 465 ASP A 320 REMARK 465 ASN A 321 REMARK 465 GLU A 322 REMARK 465 ASP A 323 REMARK 465 ASP A 324 REMARK 465 ALA A 325 REMARK 465 LEU A 326 REMARK 465 ILE A 327 REMARK 465 TYR A 328 REMARK 465 GLY A 329 REMARK 465 ILE A 330 REMARK 465 SER A 331 REMARK 465 ASP A 332 REMARK 465 GLU A 333 REMARK 465 GLU A 334 REMARK 465 ARG A 335 REMARK 465 ASP A 336 REMARK 465 ASP A 337 REMARK 465 GLU A 338 REMARK 465 GLY B 1833 REMARK 465 GLN B 2086 REMARK 465 ASN B 2087 REMARK 465 ILE B 2088 REMARK 465 LYS B 2089 REMARK 465 ALA B 2090 REMARK 465 GLY C 2144 REMARK 465 ALA C 2145 REMARK 465 MET C 2146 REMARK 465 SER C 2147 REMARK 465 LEU C 2393 REMARK 465 GLN C 2394 REMARK 465 PHE C 2395 REMARK 465 SER C 2396 REMARK 465 GLU C 2397 REMARK 465 LEU C 2398 REMARK 465 ALA C 2399 REMARK 465 GLY C 2400 REMARK 465 ASP C 2401 REMARK 465 GLU C 2402 REMARK 465 GLU C 2403 REMARK 465 LEU C 2404 REMARK 465 GLU C 2405 REMARK 465 ALA C 2406 REMARK 465 GLU C 2407 REMARK 465 GLN C 2408 REMARK 465 ILE C 2409 REMARK 465 ASP C 2410 REMARK 465 VAL C 2411 REMARK 465 PHE C 2412 REMARK 465 SER C 2413 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG B 2013 O ILE B 2083 2.05 REMARK 500 OE1 GLU A 149 O HOH A 638 2.14 REMARK 500 OD1 ASP A 111 OG1 THR A 113 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O PRO A 73 O HOH A 612 2454 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 18 -126.62 47.86 REMARK 500 ASN A 27 14.77 49.72 REMARK 500 HIS A 40 -17.97 -149.25 REMARK 500 PRO A 106 -166.68 -73.41 REMARK 500 LYS A 107 144.77 -173.17 REMARK 500 ASP A 109 -52.78 61.12 REMARK 500 LYS A 184 68.88 -118.77 REMARK 500 LYS A 215 -36.71 72.24 REMARK 500 SER B1837 1.72 -61.06 REMARK 500 SER B1838 -72.47 -95.33 REMARK 500 ASN B1839 13.76 -67.14 REMARK 500 ASN B1845 -160.30 -73.04 REMARK 500 ARG B1962 69.99 -112.11 REMARK 500 PRO B1964 35.64 -91.86 REMARK 500 ASP B1993 -124.69 51.77 REMARK 500 THR B2077 -130.83 36.85 REMARK 500 LYS C2285 87.32 -171.27 REMARK 500 ASN C2318 54.11 -93.09 REMARK 500 ASN C2355 -16.79 78.89 REMARK 500 MET C2362 43.74 -143.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE C 2501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4ILH RELATED DB: PDB REMARK 900 RELATED ID: 4ILI RELATED DB: PDB REMARK 900 RELATED ID: 4ILJ RELATED DB: PDB DBREF 4ILG A 1 355 UNP P32357 AAR2_YEAST 1 355 DBREF 4ILG B 1836 2090 UNP P33334 PRP8_YEAST 1836 2090 DBREF 4ILG C 2147 2413 UNP P33334 PRP8_YEAST 2147 2413 SEQADV 4ILG SER A 153 UNP P32357 LEU 153 ENGINEERED MUTATION SEQADV 4ILG SER A 154 UNP P32357 LYS 154 ENGINEERED MUTATION SEQADV 4ILG A UNP P32357 LEU 157 DELETION SEQADV 4ILG A UNP P32357 GLN 158 DELETION SEQADV 4ILG A UNP P32357 LYS 159 DELETION SEQADV 4ILG A UNP P32357 ALA 160 DELETION SEQADV 4ILG A UNP P32357 GLY 161 DELETION SEQADV 4ILG A UNP P32357 LYS 163 DELETION SEQADV 4ILG A UNP P32357 MET 164 DELETION SEQADV 4ILG A UNP P32357 GLU 165 DELETION SEQADV 4ILG A UNP P32357 ALA 166 DELETION SEQADV 4ILG A UNP P32357 LYS 167 DELETION SEQADV 4ILG A UNP P32357 ASN 168 DELETION SEQADV 4ILG A UNP P32357 GLU 169 DELETION SEQADV 4ILG A UNP P32357 ASP 170 DELETION SEQADV 4ILG GLY B 1833 UNP P33334 EXPRESSION TAG SEQADV 4ILG ALA B 1834 UNP P33334 EXPRESSION TAG SEQADV 4ILG MET B 1835 UNP P33334 EXPRESSION TAG SEQADV 4ILG GLY C 2144 UNP P33334 EXPRESSION TAG SEQADV 4ILG ALA C 2145 UNP P33334 EXPRESSION TAG SEQADV 4ILG MET C 2146 UNP P33334 EXPRESSION TAG SEQRES 1 A 342 MET ASN THR VAL PRO PHE THR SER ALA PRO ILE GLU VAL SEQRES 2 A 342 THR ILE GLY ILE ASP GLN TYR SER PHE ASN VAL LYS GLU SEQRES 3 A 342 ASN GLN PRO PHE HIS GLY ILE LYS ASP ILE PRO ILE GLY SEQRES 4 A 342 HIS VAL HIS VAL ILE HIS PHE GLN HIS ALA ASP ASN SER SEQRES 5 A 342 SER MET ARG TYR GLY TYR TRP PHE ASP CYS ARG MET GLY SEQRES 6 A 342 ASN PHE TYR ILE GLN TYR ASP PRO LYS ASP GLY LEU TYR SEQRES 7 A 342 LYS MET MET GLU GLU ARG ASP GLY ALA LYS PHE GLU ASN SEQRES 8 A 342 ILE VAL HIS ASN PHE LYS GLU ARG GLN MET MET VAL SER SEQRES 9 A 342 TYR PRO LYS ILE ASP GLU ASP ASP THR TRP TYR ASN LEU SEQRES 10 A 342 THR GLU PHE VAL GLN MET ASP LYS ILE ARG LYS ILE VAL SEQRES 11 A 342 ARG LYS ASP GLU ASN GLN PHE SER TYR VAL ASP SER SER SEQRES 12 A 342 MET THR THR VAL GLN GLU ASN GLU LEU SER SER SER SER SEQRES 13 A 342 SER ASP PRO ALA HIS SER LEU ASN TYR THR VAL ILE ASN SEQRES 14 A 342 PHE LYS SER ARG GLU ALA ILE ARG PRO GLY HIS GLU MET SEQRES 15 A 342 GLU ASP PHE LEU ASP LYS SER TYR TYR LEU ASN THR VAL SEQRES 16 A 342 MET LEU GLN GLY ILE PHE LYS ASN SER SER ASN TYR PHE SEQRES 17 A 342 GLY GLU LEU GLN PHE ALA PHE LEU ASN ALA MET PHE PHE SEQRES 18 A 342 GLY ASN TYR GLY SER SER LEU GLN TRP HIS ALA MET ILE SEQRES 19 A 342 GLU LEU ILE CYS SER SER ALA THR VAL PRO LYS HIS MET SEQRES 20 A 342 LEU ASP LYS LEU ASP GLU ILE LEU TYR TYR GLN ILE LYS SEQRES 21 A 342 THR LEU PRO GLU GLN TYR SER ASP ILE LEU LEU ASN GLU SEQRES 22 A 342 ARG VAL TRP ASN ILE CYS LEU TYR SER SER PHE GLN LYS SEQRES 23 A 342 ASN SER LEU HIS ASN THR GLU LYS ILE MET GLU ASN LYS SEQRES 24 A 342 TYR PRO GLU LEU LEU GLY LYS ASP ASN GLU ASP ASP ALA SEQRES 25 A 342 LEU ILE TYR GLY ILE SER ASP GLU GLU ARG ASP ASP GLU SEQRES 26 A 342 ASP ASP GLU HIS ASN PRO THR ILE VAL GLY GLY LEU TYR SEQRES 27 A 342 TYR GLN ARG PRO SEQRES 1 B 258 GLY ALA MET ASN SER SER ASN TYR ALA GLU LEU PHE ASN SEQRES 2 B 258 ASN ASP ILE LYS LEU PHE VAL ASP ASP THR ASN VAL TYR SEQRES 3 B 258 ARG VAL THR VAL HIS LYS THR PHE GLU GLY ASN VAL ALA SEQRES 4 B 258 THR LYS ALA ILE ASN GLY CYS ILE PHE THR LEU ASN PRO SEQRES 5 B 258 LYS THR GLY HIS LEU PHE LEU LYS ILE ILE HIS THR SER SEQRES 6 B 258 VAL TRP ALA GLY GLN LYS ARG LEU SER GLN LEU ALA LYS SEQRES 7 B 258 TRP LYS THR ALA GLU GLU VAL SER ALA LEU VAL ARG SER SEQRES 8 B 258 LEU PRO LYS GLU GLU GLN PRO LYS GLN ILE ILE VAL THR SEQRES 9 B 258 ARG LYS ALA MET LEU ASP PRO LEU GLU VAL HIS MET LEU SEQRES 10 B 258 ASP PHE PRO ASN ILE ALA ILE ARG PRO THR GLU LEU ARG SEQRES 11 B 258 LEU PRO PHE SER ALA ALA MET SER ILE ASP LYS LEU SER SEQRES 12 B 258 ASP VAL VAL MET LYS ALA THR GLU PRO GLN MET VAL LEU SEQRES 13 B 258 PHE ASN ILE TYR ASP ASP TRP LEU ASP ARG ILE SER SER SEQRES 14 B 258 TYR THR ALA PHE SER ARG LEU THR LEU LEU LEU ARG ALA SEQRES 15 B 258 LEU LYS THR ASN GLU GLU SER ALA LYS MET ILE LEU LEU SEQRES 16 B 258 SER ASP PRO THR ILE THR ILE LYS SER TYR HIS LEU TRP SEQRES 17 B 258 PRO SER PHE THR ASP GLU GLN TRP ILE THR ILE GLU SER SEQRES 18 B 258 GLN MET ARG ASP LEU ILE LEU THR GLU TYR GLY ARG LYS SEQRES 19 B 258 TYR ASN VAL ASN ILE SER ALA LEU THR GLN THR GLU ILE SEQRES 20 B 258 LYS ASP ILE ILE LEU GLY GLN ASN ILE LYS ALA SEQRES 1 C 270 GLY ALA MET SER SER LYS ASN GLU TRP ARG LYS SER ALA SEQRES 2 C 270 ILE ALA ASN THR LEU LEU TYR LEU ARG LEU LYS ASN ILE SEQRES 3 C 270 TYR VAL SER ALA ASP ASP PHE VAL GLU GLU GLN ASN VAL SEQRES 4 C 270 TYR VAL LEU PRO LYS ASN LEU LEU LYS LYS PHE ILE GLU SEQRES 5 C 270 ILE SER ASP VAL LYS ILE GLN VAL ALA ALA PHE ILE TYR SEQRES 6 C 270 GLY MET SER ALA LYS ASP HIS PRO LYS VAL LYS GLU ILE SEQRES 7 C 270 LYS THR VAL VAL LEU VAL PRO GLN LEU GLY HIS VAL GLY SEQRES 8 C 270 SER VAL GLN ILE SER ASN ILE PRO ASP ILE GLY ASP LEU SEQRES 9 C 270 PRO ASP THR GLU GLY LEU GLU LEU LEU GLY TRP ILE HIS SEQRES 10 C 270 THR GLN THR GLU GLU LEU LYS PHE MET ALA ALA SER GLU SEQRES 11 C 270 VAL ALA THR HIS SER LYS LEU PHE ALA ASP LYS LYS ARG SEQRES 12 C 270 ASP CYS ILE ASP ILE SER ILE PHE SER THR PRO GLY SER SEQRES 13 C 270 VAL SER LEU SER ALA TYR ASN LEU THR ASP GLU GLY TYR SEQRES 14 C 270 GLN TRP GLY GLU GLU ASN LYS ASP ILE MET ASN VAL LEU SEQRES 15 C 270 SER GLU GLY PHE GLU PRO THR PHE SER THR HIS ALA GLN SEQRES 16 C 270 LEU LEU LEU SER ASP ARG ILE THR GLY ASN PHE ILE ILE SEQRES 17 C 270 PRO SER GLY ASN VAL TRP ASN TYR THR PHE MET GLY THR SEQRES 18 C 270 ALA PHE ASN GLN GLU GLY ASP TYR ASN PHE LYS TYR GLY SEQRES 19 C 270 ILE PRO LEU GLU PHE TYR ASN GLU MET HIS ARG PRO VAL SEQRES 20 C 270 HIS PHE LEU GLN PHE SER GLU LEU ALA GLY ASP GLU GLU SEQRES 21 C 270 LEU GLU ALA GLU GLN ILE ASP VAL PHE SER HET EPE C2501 15 HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETSYN EPE HEPES FORMUL 4 EPE C8 H18 N2 O4 S FORMUL 5 HOH *689(H2 O) HELIX 1 1 ASP A 85 HIS A 94 1 10 HELIX 2 2 ASN A 95 GLN A 100 1 6 HELIX 3 3 ASP A 112 GLU A 119 1 8 HELIX 4 4 GLN A 122 VAL A 130 1 9 HELIX 5 5 GLN A 148 GLU A 151 5 4 HELIX 6 6 ASP A 171 ALA A 173 5 3 HELIX 7 7 HIS A 193 ASP A 200 1 8 HELIX 8 8 LYS A 201 THR A 207 1 7 HELIX 9 9 ASN A 216 GLY A 235 1 20 HELIX 10 10 ASN A 236 SER A 252 1 17 HELIX 11 11 PRO A 257 LEU A 275 1 19 HELIX 12 12 TYR A 279 LEU A 284 1 6 HELIX 13 13 ASN A 285 SER A 295 1 11 HELIX 14 14 GLN A 298 SER A 301 5 4 HELIX 15 15 LEU A 302 TYR A 313 1 12 HELIX 16 16 TYR B 1840 ASN B 1845 5 6 HELIX 17 17 HIS B 1895 ALA B 1900 5 6 HELIX 18 18 ARG B 1904 LEU B 1924 1 21 HELIX 19 19 PRO B 1925 GLN B 1929 5 5 HELIX 20 20 ARG B 1937 ALA B 1939 5 3 HELIX 21 21 MET B 1940 MET B 1948 1 9 HELIX 22 22 PRO B 1964 SER B 1970 5 7 HELIX 23 23 ILE B 1971 ALA B 1981 1 11 HELIX 24 24 ASP B 1994 ARG B 1998 5 5 HELIX 25 25 SER B 2000 ASN B 2018 1 19 HELIX 26 26 ASN B 2018 SER B 2028 1 11 HELIX 27 27 THR B 2044 TYR B 2067 1 24 HELIX 28 28 GLU B 2078 GLY B 2085 1 8 HELIX 29 29 LYS C 2149 THR C 2160 1 12 HELIX 30 30 LEU C 2161 LEU C 2166 5 6 HELIX 31 31 LYS C 2187 ILE C 2196 1 10 HELIX 32 32 ALA C 2270 ALA C 2282 1 13 HELIX 33 33 THR C 2308 ASN C 2318 1 11 HELIX 34 34 GLU C 2330 THR C 2332 5 3 HELIX 35 35 MET C 2362 PHE C 2366 5 5 HELIX 36 36 ASN C 2384 ARG C 2388 5 5 SHEET 1 A 3 ASN A 2 PRO A 5 0 SHEET 2 A 3 GLY A 32 ILE A 36 -1 O ILE A 33 N VAL A 4 SHEET 3 A 3 VAL A 103 SER A 104 1 O VAL A 103 N LYS A 34 SHEET 1 B 5 TYR A 20 VAL A 24 0 SHEET 2 B 5 VAL A 13 ILE A 17 -1 N ILE A 17 O TYR A 20 SHEET 3 B 5 HIS A 42 HIS A 48 -1 O HIS A 45 N GLY A 16 SHEET 4 B 5 TYR A 56 PHE A 60 -1 O TYR A 56 N PHE A 46 SHEET 5 B 5 SER A 138 ASP A 141 -1 O SER A 138 N TRP A 59 SHEET 1 C 2 PHE A 67 ASP A 72 0 SHEET 2 C 2 LEU A 77 GLU A 82 -1 O LYS A 79 N GLN A 70 SHEET 1 D 2 THR A 145 THR A 146 0 SHEET 2 D 2 SER A 175 LEU A 176 1 O LEU A 176 N THR A 145 SHEET 1 E11 VAL B1870 ILE B1875 0 SHEET 2 E11 ARG B1859 LYS B1864 -1 N HIS B1863 O ALA B1871 SHEET 3 E11 THR A 345 GLN A 353 1 N VAL A 347 O VAL B1860 SHEET 4 E11 ASN C2168 SER C2172 1 O ILE C2169 N TYR A 351 SHEET 5 E11 SER C2299 LEU C2307 1 O LEU C2302 N TYR C2170 SHEET 6 E11 ILE C2289 THR C2296 -1 N PHE C2294 O SER C2301 SHEET 7 E11 GLU C2254 GLN C2262 1 N HIS C2260 O ILE C2293 SHEET 8 E11 ALA C2204 SER C2211 -1 N GLY C2209 O GLU C2254 SHEET 9 E11 VAL C2218 VAL C2225 -1 O THR C2223 N TYR C2208 SHEET 10 E11 ASN C2348 PRO C2352 1 O ASN C2348 N VAL C2224 SHEET 11 E11 PHE C2374 TYR C2376 -1 O LYS C2375 N ILE C2351 SHEET 1 F10 VAL B1870 ILE B1875 0 SHEET 2 F10 ARG B1859 LYS B1864 -1 N HIS B1863 O ALA B1871 SHEET 3 F10 THR A 345 GLN A 353 1 N VAL A 347 O VAL B1860 SHEET 4 F10 ASN C2168 SER C2172 1 O ILE C2169 N TYR A 351 SHEET 5 F10 SER C2299 LEU C2307 1 O LEU C2302 N TYR C2170 SHEET 6 F10 SER C2334 SER C2342 -1 O ALA C2337 N ALA C2304 SHEET 7 F10 VAL C2182 PRO C2186 1 N LEU C2185 O LEU C2340 SHEET 8 F10 VAL C2218 VAL C2225 1 O LYS C2219 N VAL C2182 SHEET 9 F10 ASN C2348 PRO C2352 1 O ASN C2348 N VAL C2224 SHEET 10 F10 PHE C2374 TYR C2376 -1 O LYS C2375 N ILE C2351 SHEET 1 G 6 ALA B1955 ARG B1957 0 SHEET 2 G 6 GLN B1932 VAL B1935 1 N VAL B1935 O ARG B1957 SHEET 3 G 6 LYS B1849 ASP B1853 1 N LEU B1850 O ILE B1934 SHEET 4 G 6 GLY B1877 LEU B1882 -1 O LEU B1882 N PHE B1851 SHEET 5 G 6 HIS B1888 ILE B1894 -1 O PHE B1890 N THR B1881 SHEET 6 G 6 GLN B1985 ASN B1990 -1 O PHE B1989 N LEU B1889 SHEET 1 H 2 GLN C2229 HIS C2232 0 SHEET 2 H 2 SER C2235 ILE C2238 -1 O SER C2235 N HIS C2232 SITE 1 AC1 7 PRO C2352 SER C2353 GLY C2354 ASN C2373 SITE 2 AC1 7 HOH C2637 HOH C2716 HOH C2738 CRYST1 84.768 63.739 110.518 90.00 95.39 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011797 0.000000 0.001113 0.00000 SCALE2 0.000000 0.015689 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009088 0.00000