HEADER SIGNALING PROTEIN 02-JAN-13 4IM8 TITLE LOW RESOLUTION CRYSTAL STRUCTURE OF MOUSE RAGE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADVANCED GLYCATION END-PRODUCTS RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ADVANCED GLYCOSYLATION END PRODUCT-SPECIFIC RECEPTOR, COMPND 5 ADVANCED GLYCOSYLATION END PRODUCT-SPECIFIC RECEPTOR, ISOFORM CRA_B, COMPND 6 RAGE; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: AGER, RAGE, MCG_5497; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HEPARAN SULFATE, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.XU,J.H.YOUNG,J.M.KRAHN,D.SONG,K.D.CORBETT,W.J.CHAZIN,L.C.PEDERSEN, AUTHOR 2 J.D.ESKO REVDAT 4 20-SEP-23 4IM8 1 SEQADV REVDAT 3 26-FEB-14 4IM8 1 JRNL REVDAT 2 20-NOV-13 4IM8 1 JRNL REVDAT 1 14-AUG-13 4IM8 0 JRNL AUTH D.XU,J.H.YOUNG,J.M.KRAHN,D.SONG,K.D.CORBETT,W.J.CHAZIN, JRNL AUTH 2 L.C.PEDERSEN,J.D.ESKO JRNL TITL STABLE RAGE-HEPARAN SULFATE COMPLEXES ARE ESSENTIAL FOR JRNL TITL 2 SIGNAL TRANSDUCTION. JRNL REF ACS CHEM.BIOL. V. 8 1611 2013 JRNL REFN ISSN 1554-8929 JRNL PMID 23679870 JRNL DOI 10.1021/CB4001553 REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.16 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 3645 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.262 REMARK 3 R VALUE (WORKING SET) : 0.258 REMARK 3 FREE R VALUE : 0.336 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 183 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 36.420 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.016 1398 REMARK 3 ANGLE : 1.756 1925 REMARK 3 CHIRALITY : 0.098 238 REMARK 3 PLANARITY : 0.006 251 REMARK 3 DIHEDRAL : 13.539 462 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 22:117) REMARK 3 ORIGIN FOR THE GROUP (A): -20.3967 -9.3338 5.5377 REMARK 3 T TENSOR REMARK 3 T11: 0.6427 T22: 0.6320 REMARK 3 T33: 0.7777 T12: 0.0521 REMARK 3 T13: 0.0946 T23: -0.1044 REMARK 3 L TENSOR REMARK 3 L11: 0.0210 L22: 0.0090 REMARK 3 L33: 0.0064 L12: 0.0255 REMARK 3 L13: -0.0266 L23: 0.0022 REMARK 3 S TENSOR REMARK 3 S11: -0.1419 S12: 0.1584 S13: 0.1153 REMARK 3 S21: 0.2143 S22: 0.1218 S23: -0.2786 REMARK 3 S31: -0.2638 S32: 0.0564 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 118:214) REMARK 3 ORIGIN FOR THE GROUP (A): -23.9844 -44.1488 22.2305 REMARK 3 T TENSOR REMARK 3 T11: -1.4665 T22: -0.5211 REMARK 3 T33: -0.1114 T12: 1.4283 REMARK 3 T13: 0.7834 T23: -0.3493 REMARK 3 L TENSOR REMARK 3 L11: 0.0147 L22: 0.0278 REMARK 3 L33: -0.0459 L12: -0.0401 REMARK 3 L13: 0.0101 L23: -0.0155 REMARK 3 S TENSOR REMARK 3 S11: -0.6585 S12: -0.1030 S13: 0.1532 REMARK 3 S21: 0.1024 S22: -0.3448 S23: -0.1986 REMARK 3 S31: -0.1446 S32: 0.0282 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 215:228) REMARK 3 ORIGIN FOR THE GROUP (A): -8.8986 -20.6038 24.7423 REMARK 3 T TENSOR REMARK 3 T11: 1.0028 T22: 1.1288 REMARK 3 T33: 1.1686 T12: 0.2348 REMARK 3 T13: -0.2563 T23: 0.1082 REMARK 3 L TENSOR REMARK 3 L11: 0.0010 L22: 0.0045 REMARK 3 L33: 0.0108 L12: 0.0021 REMARK 3 L13: -0.0031 L23: 0.0105 REMARK 3 S TENSOR REMARK 3 S11: -0.1022 S12: -0.0236 S13: -0.0290 REMARK 3 S21: 0.0036 S22: -0.1865 S23: -0.0210 REMARK 3 S31: 0.0024 S32: 0.0696 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4IM8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1000076928. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-AUG-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1. REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI 220 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 3672 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 48106.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 13.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.10700 REMARK 200 FOR THE DATA SET : 8.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.70200 REMARK 200 FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER, PHENIX REMARK 200 STARTING MODEL: 3CJJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS PH 8.5, 200MM MGCL2 AND 22% REMARK 280 PEG 400. PROTEIN WAS PURIFIED ON GEL FILTRATION IN THE PRESENCE REMARK 280 OF EXCESS DODECASACCHARIDE HEPARAN SULFATE THAT CAUSED A SHIFT REMARK 280 IN THE ELUTION PROFILE FROM MONOMER TO HEXAMER, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+3/4,X+1/4,-Z+1/4 REMARK 290 14555 -Y+3/4,-X+3/4,-Z+3/4 REMARK 290 15555 Y+1/4,-X+1/4,Z+3/4 REMARK 290 16555 -Y+1/4,X+3/4,Z+1/4 REMARK 290 17555 X+3/4,Z+1/4,-Y+1/4 REMARK 290 18555 -X+1/4,Z+3/4,Y+1/4 REMARK 290 19555 -X+3/4,-Z+3/4,-Y+3/4 REMARK 290 20555 X+1/4,-Z+1/4,Y+3/4 REMARK 290 21555 Z+3/4,Y+1/4,-X+1/4 REMARK 290 22555 Z+1/4,-Y+1/4,X+3/4 REMARK 290 23555 -Z+1/4,Y+3/4,X+1/4 REMARK 290 24555 -Z+3/4,-Y+3/4,-X+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 57.90500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.90500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 57.90500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 57.90500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 57.90500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 57.90500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 57.90500 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 57.90500 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 57.90500 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 57.90500 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 57.90500 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 57.90500 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 57.90500 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 57.90500 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 57.90500 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 57.90500 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 57.90500 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 57.90500 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 86.85750 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 28.95250 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 28.95250 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 86.85750 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 86.85750 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 86.85750 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 28.95250 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 28.95250 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 86.85750 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 28.95250 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 86.85750 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 28.95250 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 86.85750 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 28.95250 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 28.95250 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 28.95250 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 86.85750 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 28.95250 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 86.85750 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 86.85750 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 86.85750 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 28.95250 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 28.95250 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 86.85750 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 86.85750 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 28.95250 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 28.95250 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 28.95250 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 28.95250 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 86.85750 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 28.95250 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 86.85750 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 28.95250 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 86.85750 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 86.85750 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 86.85750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 -1.000000 0.000000 -28.95250 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 -28.95250 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -28.95250 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 -28.95250 REMARK 350 BIOMT2 5 0.000000 0.000000 -1.000000 -28.95250 REMARK 350 BIOMT3 5 0.000000 -1.000000 0.000000 -28.95250 REMARK 350 BIOMT1 6 0.000000 0.000000 -1.000000 -28.95250 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 -28.95250 REMARK 350 BIOMT3 6 -1.000000 0.000000 0.000000 -28.95250 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 -28.95250 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -28.95250 REMARK 350 BIOMT3 2 -1.000000 0.000000 0.000000 -28.95250 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 60670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -95.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 -57.90500 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 -57.90500 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 -57.90500 REMARK 350 BIOMT2 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 57.90500 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 -28.95250 REMARK 350 BIOMT2 4 1.000000 0.000000 0.000000 28.95250 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 28.95250 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 -86.85750 REMARK 350 BIOMT2 5 0.000000 0.000000 1.000000 -28.95250 REMARK 350 BIOMT3 5 0.000000 1.000000 0.000000 28.95250 REMARK 350 BIOMT1 6 0.000000 0.000000 -1.000000 -28.95250 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 -28.95250 REMARK 350 BIOMT3 6 -1.000000 0.000000 0.000000 -28.95250 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 66 REMARK 465 GLN A 67 REMARK 465 GLY A 68 REMARK 465 GLY A 69 REMARK 465 PRO A 70 REMARK 465 TRP A 71 REMARK 465 THR A 196 REMARK 465 GLN A 197 REMARK 465 GLY A 198 REMARK 465 GLU A 229 REMARK 465 PRO A 230 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 22 CG SD CE REMARK 470 ILE A 30 CD1 REMARK 470 LYS A 39 CG CD CE NZ REMARK 470 LYS A 43 CG CD CE NZ REMARK 470 LYS A 44 CG CD CE NZ REMARK 470 GLN A 48 CD OE1 NE2 REMARK 470 GLU A 50 CG CD OE1 OE2 REMARK 470 LYS A 52 CG CD CE NZ REMARK 470 GLU A 59 CG CD OE1 OE2 REMARK 470 LYS A 62 CG CD CE NZ REMARK 470 ARG A 76 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 77 CD1 REMARK 470 VAL A 91 CG2 REMARK 470 ARG A 97 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 99 CG CD NE CZ NH1 NH2 REMARK 470 THR A 101 CG2 REMARK 470 ARG A 103 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 104 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 106 CG CD CE NZ REMARK 470 VAL A 108 CG1 CG2 REMARK 470 LYS A 109 CG CD CE NZ REMARK 470 ASN A 111 CG OD1 ND2 REMARK 470 ARG A 113 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 115 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 122 CG CD CE NZ REMARK 470 GLU A 131 CG CD OE1 OE2 REMARK 470 SER A 135 OG REMARK 470 GLU A 146 CD OE1 OE2 REMARK 470 LYS A 161 CG CD CE NZ REMARK 470 LEU A 162 CG CD1 CD2 REMARK 470 ILE A 164 CD1 REMARK 470 LYS A 168 CG CD CE NZ REMARK 470 GLU A 169 CG CD OE1 OE2 REMARK 470 LYS A 173 CG CD CE NZ REMARK 470 GLU A 175 CG CD OE1 OE2 REMARK 470 ARG A 177 CZ NH1 NH2 REMARK 470 ARG A 178 NE CZ NH1 NH2 REMARK 470 ILE A 194 CD1 REMARK 470 THR A 200 CG2 REMARK 470 ARG A 214 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 215 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 216 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 219 CG OD1 ND2 REMARK 470 ILE A 223 CD1 REMARK 470 LEU A 225 CD1 CD2 REMARK 470 ARG A 226 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 228 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 217 C - N - CA ANGL. DEV. = -9.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 60 -78.15 -113.88 REMARK 500 VAL A 74 -71.09 -77.17 REMARK 500 SER A 135 -10.95 93.22 REMARK 500 PRO A 150 -168.43 -69.36 REMARK 500 LYS A 168 -76.12 -121.12 REMARK 500 THR A 200 -77.66 -123.21 REMARK 500 ARG A 214 -72.76 -67.07 REMARK 500 ARG A 216 77.75 40.57 REMARK 500 REMARK 500 REMARK: NULL DBREF 4IM8 A 23 230 UNP O35444 O35444_MOUSE 23 230 SEQADV 4IM8 MET A 22 UNP O35444 EXPRESSION TAG SEQRES 1 A 209 MET GLY GLN ASN ILE THR ALA ARG ILE GLY GLU PRO LEU SEQRES 2 A 209 VAL LEU SER CYS LYS GLY ALA PRO LYS LYS PRO PRO GLN SEQRES 3 A 209 GLN LEU GLU TRP LYS LEU ASN THR GLY ARG THR GLU ALA SEQRES 4 A 209 TRP LYS VAL LEU SER PRO GLN GLY GLY PRO TRP ASP SER SEQRES 5 A 209 VAL ALA ARG ILE LEU PRO ASN GLY SER LEU LEU LEU PRO SEQRES 6 A 209 ALA THR GLY ILE VAL ASP GLU GLY THR PHE ARG CYS ARG SEQRES 7 A 209 ALA THR ASN ARG ARG GLY LYS GLU VAL LYS SER ASN TYR SEQRES 8 A 209 ARG VAL ARG VAL TYR GLN ILE PRO GLY LYS PRO GLU ILE SEQRES 9 A 209 VAL ASP PRO ALA SER GLU LEU THR ALA SER VAL PRO ASN SEQRES 10 A 209 LYS VAL GLY THR CYS VAL SER GLU GLY SER TYR PRO ALA SEQRES 11 A 209 GLY THR LEU SER TRP HIS LEU ASP GLY LYS LEU LEU ILE SEQRES 12 A 209 PRO ASP GLY LYS GLU THR LEU VAL LYS GLU GLU THR ARG SEQRES 13 A 209 ARG HIS PRO GLU THR GLY LEU PHE THR LEU ARG SER GLU SEQRES 14 A 209 LEU THR VAL ILE PRO THR GLN GLY GLY THR HIS PRO THR SEQRES 15 A 209 PHE SER CYS SER PHE SER LEU GLY LEU PRO ARG ARG ARG SEQRES 16 A 209 PRO LEU ASN THR ALA PRO ILE GLN LEU ARG VAL ARG GLU SEQRES 17 A 209 PRO HELIX 1 1 GLY A 89 GLU A 93 5 5 SHEET 1 A 5 ASN A 25 ARG A 29 0 SHEET 2 A 5 GLU A 107 TYR A 117 1 O ARG A 113 N ILE A 26 SHEET 3 A 5 GLY A 94 THR A 101 -1 N GLY A 94 O VAL A 114 SHEET 4 A 5 GLN A 48 ASN A 54 -1 N GLN A 48 O THR A 101 SHEET 5 A 5 LYS A 62 LEU A 64 -1 O LEU A 64 N TRP A 51 SHEET 1 B 3 LEU A 34 LEU A 36 0 SHEET 2 B 3 LEU A 83 LEU A 85 -1 O LEU A 83 N LEU A 36 SHEET 3 B 3 ARG A 76 ILE A 77 -1 N ARG A 76 O LEU A 84 SHEET 1 C 4 GLU A 124 VAL A 126 0 SHEET 2 C 4 ASN A 138 SER A 148 -1 O THR A 142 N VAL A 126 SHEET 3 C 4 PHE A 185 VAL A 193 -1 O SER A 189 N CYS A 143 SHEET 4 C 4 THR A 170 ARG A 178 -1 N LYS A 173 O GLU A 190 SHEET 1 D 3 LYS A 161 LEU A 162 0 SHEET 2 D 3 THR A 153 LEU A 158 -1 N LEU A 158 O LYS A 161 SHEET 3 D 3 PHE A 204 SER A 209 -1 O SER A 205 N HIS A 157 SSBOND 1 CYS A 38 CYS A 98 1555 1555 2.57 SSBOND 2 CYS A 143 CYS A 206 1555 1555 2.02 CISPEP 1 PRO A 45 PRO A 46 0 -4.42 CISPEP 2 TYR A 149 PRO A 150 0 -4.66 CRYST1 115.810 115.810 115.810 90.00 90.00 90.00 P 41 3 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008635 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008635 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008635 0.00000