HEADER IMMUNE SYSTEM 03-JAN-13 4IMK TITLE UNCROSSED FAB BINDING TO HUMAN ANGIOPOIETIN 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEAVY CHAIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: LIGHT CHAIN; COMPND 7 CHAIN: C, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 10029 KEYWDS ANTIGEN-BINDING FRAGMENT (FAB), HUMAN ANGIOPOIETIN 2, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR S.FENN,C.SCHILLER,J.J.GRIESE,K.-P.HOPFNER,H.KETTENBERGER REVDAT 2 22-MAY-13 4IMK 1 JRNL REVDAT 1 17-APR-13 4IMK 0 JRNL AUTH S.FENN,C.B.SCHILLER,J.J.GRIESE,H.DUERR,S.IMHOF-JUNG, JRNL AUTH 2 C.GASSNER,J.MOELLEKEN,J.T.REGULA,W.SCHAEFER,M.THOMAS, JRNL AUTH 3 C.KLEIN,K.P.HOPFNER,H.KETTENBERGER JRNL TITL CRYSTAL STRUCTURE OF AN ANTI-ANG2 CROSSFAB DEMONSTRATES JRNL TITL 2 COMPLETE STRUCTURAL AND FUNCTIONAL INTEGRITY OF THE VARIABLE JRNL TITL 3 DOMAIN. JRNL REF PLOS ONE V. 8 61953 2013 JRNL REFN ESSN 1932-6203 JRNL PMID 23613981 JRNL DOI 10.1371/JOURNAL.PONE.0061953 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.76 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 60561 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3029 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.7711 - 6.1643 1.00 2838 150 0.1847 0.2014 REMARK 3 2 6.1643 - 4.8944 1.00 2697 142 0.1755 0.2054 REMARK 3 3 4.8944 - 4.2762 1.00 2679 141 0.1486 0.1636 REMARK 3 4 4.2762 - 3.8855 1.00 2624 138 0.1703 0.1956 REMARK 3 5 3.8855 - 3.6071 1.00 2644 139 0.1880 0.1965 REMARK 3 6 3.6071 - 3.3945 1.00 2642 139 0.1944 0.2179 REMARK 3 7 3.3945 - 3.2245 1.00 2617 138 0.2134 0.2212 REMARK 3 8 3.2245 - 3.0842 1.00 2630 138 0.2215 0.2659 REMARK 3 9 3.0842 - 2.9655 1.00 2611 138 0.2297 0.2533 REMARK 3 10 2.9655 - 2.8632 1.00 2575 135 0.2313 0.2597 REMARK 3 11 2.8632 - 2.7737 1.00 2604 137 0.2365 0.2694 REMARK 3 12 2.7737 - 2.6944 1.00 2638 139 0.2325 0.2745 REMARK 3 13 2.6944 - 2.6235 1.00 2576 136 0.2463 0.2894 REMARK 3 14 2.6235 - 2.5595 1.00 2607 137 0.2417 0.2782 REMARK 3 15 2.5595 - 2.5013 1.00 2602 137 0.2424 0.3377 REMARK 3 16 2.5013 - 2.4480 1.00 2555 134 0.2574 0.3049 REMARK 3 17 2.4480 - 2.3991 1.00 2596 137 0.2487 0.2941 REMARK 3 18 2.3991 - 2.3538 1.00 2563 135 0.2662 0.3148 REMARK 3 19 2.3538 - 2.3118 1.00 2631 139 0.2603 0.2960 REMARK 3 20 2.3118 - 2.2726 1.00 2534 133 0.2655 0.3153 REMARK 3 21 2.2726 - 2.2359 1.00 2615 137 0.2811 0.3684 REMARK 3 22 2.2359 - 2.2015 0.96 2454 130 0.3130 0.3274 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 6882 REMARK 3 ANGLE : 0.824 9368 REMARK 3 CHIRALITY : 0.056 1033 REMARK 3 PLANARITY : 0.004 1207 REMARK 3 DIHEDRAL : 13.732 2444 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4IMK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JAN-13. REMARK 100 THE RCSB ID CODE IS RCSB076940. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60561 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 46.761 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15%(W/V) PEG4000, 0.1 M TRI-NA- REMARK 280 CITRATE, 15%(V/V) ISOPROPANOL, PH 7.0, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.98450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 102.90650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.33500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 102.90650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.98450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.33500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 230 REMARK 465 GLN C 1 REMARK 465 PRO C 2 REMARK 465 GLY C 216 REMARK 465 SER C 217 REMARK 465 GLY C 218 REMARK 465 HIS C 219 REMARK 465 HIS C 220 REMARK 465 HIS C 221 REMARK 465 HIS C 222 REMARK 465 HIS C 223 REMARK 465 HIS C 224 REMARK 465 GLN D 1 REMARK 465 PRO D 2 REMARK 465 GLY D 213 REMARK 465 GLU D 214 REMARK 465 CYS D 215 REMARK 465 GLY D 216 REMARK 465 SER D 217 REMARK 465 GLY D 218 REMARK 465 HIS D 219 REMARK 465 HIS D 220 REMARK 465 HIS D 221 REMARK 465 HIS D 222 REMARK 465 HIS D 223 REMARK 465 HIS D 224 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 SER B 107 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLN A 1 CG CD OE1 NE2 REMARK 480 LYS A 23 CE NZ REMARK 480 GLN A 62 OE1 REMARK 480 TYR A 104 O CB CG CD1 CD2 CE1 CE2 REMARK 480 TYR A 104 CZ OH REMARK 480 TYR A 105 O CB CG CD1 CD2 CE1 CE2 REMARK 480 TYR A 105 CZ OH REMARK 480 ASP A 106 O CB CG OD1 OD2 REMARK 480 SER A 107 OG REMARK 480 LYS A 145 CB CG CD CE NZ REMARK 480 GLY A 149 C O REMARK 480 THR A 176 CB OG1 CG2 REMARK 480 LEU A 205 CD1 CD2 REMARK 480 GLY A 206 C REMARK 480 THR A 207 OG1 CG2 REMARK 480 ILE A 211 CD1 REMARK 480 ASN A 220 ND2 REMARK 480 LYS A 222 CG CD CE NZ REMARK 480 LYS A 226 CD CE NZ REMARK 480 GLU A 228 OE1 OE2 REMARK 480 GLN B 1 CB CG CD OE1 NE2 REMARK 480 GLN B 3 OE1 NE2 REMARK 480 LYS B 13 CG CD CE NZ REMARK 480 LYS B 19 CD CE NZ REMARK 480 LYS B 23 CG CD CE NZ REMARK 480 GLN B 62 CG CD OE1 NE2 REMARK 480 LYS B 63 CE REMARK 480 GLN B 65 CG CD OE1 NE2 REMARK 480 THR B 69 OG1 CG2 REMARK 480 ARG B 72 CG CD NE CZ NH1 NH2 REMARK 480 ASP B 73 CG OD1 OD2 REMARK 480 GLU B 82 CG CD OE1 OE2 REMARK 480 SER B 84 OG REMARK 480 ARG B 85 CD NE CZ NH1 NH2 REMARK 480 TYR B 103 CE1 CE2 CZ OH REMARK 480 TYR B 104 CG CD1 CD2 CE1 CE2 CZ OH REMARK 480 SER B 108 CB OG REMARK 480 LYS B 133 CE NZ REMARK 480 LYS B 145 CD CE NZ REMARK 480 LYS B 217 CD CE NZ REMARK 480 LYS B 222 CD CE NZ REMARK 480 LYS B 230 CG CD CE NZ REMARK 480 GLU C 59 CG CD OE1 OE2 REMARK 480 ARG C 76 CD NE CZ NH1 NH2 REMARK 480 SER C 93 OG REMARK 480 LYS C 127 CD CE NZ REMARK 480 ARG C 143 CZ NH1 NH2 REMARK 480 GLU C 144 CD OE1 OE2 REMARK 480 LYS C 146 CD CE NZ REMARK 480 LEU C 155 CD1 REMARK 480 LYS C 170 CE NZ REMARK 480 GLU C 188 OE2 REMARK 480 LYS C 189 NZ REMARK 480 LYS C 191 CE NZ REMARK 480 GLN D 16 CD OE1 NE2 REMARK 480 GLU D 59 OE2 REMARK 480 ASP D 123 CG OD1 OD2 REMARK 480 LYS D 127 CB CG CD CE NZ REMARK 480 GLU D 144 CD OE1 OE2 REMARK 480 LYS D 146 CE NZ REMARK 480 GLN D 148 OE1 NE2 REMARK 480 LYS D 184 CG CD CE NZ REMARK 480 LYS D 191 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 103 41.50 -96.33 REMARK 500 ASP C 50 -55.35 74.69 REMARK 500 SER C 51 -1.45 -140.24 REMARK 500 LYS C 191 -62.82 -109.80 REMARK 500 ASP D 50 -52.78 68.44 REMARK 500 SER D 51 -3.94 -141.34 REMARK 500 ASN D 153 -3.08 73.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 301 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 7 OG REMARK 620 2 GLY A 8 O 113.6 REMARK 620 3 GLU A 10 OE2 132.4 97.5 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4IML RELATED DB: PDB DBREF 4IMK A 1 230 PDB 4IMK 4IMK 1 230 DBREF 4IMK B 1 230 PDB 4IMK 4IMK 1 230 DBREF 4IMK C 1 224 PDB 4IMK 4IMK 1 224 DBREF 4IMK D 1 224 PDB 4IMK 4IMK 1 224 SEQRES 1 A 230 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 A 230 PRO GLY ALA SER VAL LYS VAL SER CYS LYS ALA SER GLY SEQRES 3 A 230 TYR THR PHE THR GLY TYR TYR MET HIS TRP VAL ARG GLN SEQRES 4 A 230 ALA PRO GLY GLN GLY LEU GLU TRP MET GLY TRP ILE ASN SEQRES 5 A 230 PRO ASN SER GLY GLY THR ASN TYR ALA GLN LYS PHE GLN SEQRES 6 A 230 GLY ARG VAL THR MET THR ARG ASP THR SER ILE SER THR SEQRES 7 A 230 ALA TYR MET GLU LEU SER ARG LEU ARG SER ASP ASP THR SEQRES 8 A 230 ALA VAL TYR TYR CYS ALA ARG SER PRO ASN PRO TYR TYR SEQRES 9 A 230 TYR ASP SER SER GLY TYR TYR TYR PRO GLY ALA PHE ASP SEQRES 10 A 230 ILE TRP GLY GLN GLY THR MET VAL THR VAL SER SER ALA SEQRES 11 A 230 SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SEQRES 12 A 230 SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY CYS SEQRES 13 A 230 LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER SEQRES 14 A 230 TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR PHE SEQRES 15 A 230 PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SEQRES 16 A 230 SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR GLN SEQRES 17 A 230 THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR SEQRES 18 A 230 LYS VAL ASP LYS LYS VAL GLU PRO LYS SEQRES 1 B 230 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 B 230 PRO GLY ALA SER VAL LYS VAL SER CYS LYS ALA SER GLY SEQRES 3 B 230 TYR THR PHE THR GLY TYR TYR MET HIS TRP VAL ARG GLN SEQRES 4 B 230 ALA PRO GLY GLN GLY LEU GLU TRP MET GLY TRP ILE ASN SEQRES 5 B 230 PRO ASN SER GLY GLY THR ASN TYR ALA GLN LYS PHE GLN SEQRES 6 B 230 GLY ARG VAL THR MET THR ARG ASP THR SER ILE SER THR SEQRES 7 B 230 ALA TYR MET GLU LEU SER ARG LEU ARG SER ASP ASP THR SEQRES 8 B 230 ALA VAL TYR TYR CYS ALA ARG SER PRO ASN PRO TYR TYR SEQRES 9 B 230 TYR ASP SER SER GLY TYR TYR TYR PRO GLY ALA PHE ASP SEQRES 10 B 230 ILE TRP GLY GLN GLY THR MET VAL THR VAL SER SER ALA SEQRES 11 B 230 SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SEQRES 12 B 230 SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY CYS SEQRES 13 B 230 LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER SEQRES 14 B 230 TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR PHE SEQRES 15 B 230 PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SEQRES 16 B 230 SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR GLN SEQRES 17 B 230 THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR SEQRES 18 B 230 LYS VAL ASP LYS LYS VAL GLU PRO LYS SEQRES 1 C 224 GLN PRO GLY LEU THR GLN PRO PRO SER VAL SER VAL ALA SEQRES 2 C 224 PRO GLY GLN THR ALA ARG ILE THR CYS GLY GLY ASN ASN SEQRES 3 C 224 ILE GLY SER LYS SER VAL HIS TRP TYR GLN GLN LYS PRO SEQRES 4 C 224 GLY GLN ALA PRO VAL LEU VAL VAL TYR ASP ASP SER ASP SEQRES 5 C 224 ARG PRO SER GLY ILE PRO GLU ARG PHE SER GLY SER ASN SEQRES 6 C 224 SER GLY ASN THR ALA THR LEU THR ILE SER ARG VAL GLU SEQRES 7 C 224 ALA GLY ASP GLU ALA ASP TYR TYR CYS GLN VAL TRP ASP SEQRES 8 C 224 SER SER SER ASP HIS TYR VAL PHE GLY THR GLY THR LYS SEQRES 9 C 224 VAL THR VAL LEU ARG THR VAL ALA ALA PRO SER VAL PHE SEQRES 10 C 224 ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR SEQRES 11 C 224 ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG SEQRES 12 C 224 GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SEQRES 13 C 224 SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER SEQRES 14 C 224 LYS ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SEQRES 15 C 224 SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS SEQRES 16 C 224 GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SEQRES 17 C 224 SER PHE ASN ARG GLY GLU CYS GLY SER GLY HIS HIS HIS SEQRES 18 C 224 HIS HIS HIS SEQRES 1 D 224 GLN PRO GLY LEU THR GLN PRO PRO SER VAL SER VAL ALA SEQRES 2 D 224 PRO GLY GLN THR ALA ARG ILE THR CYS GLY GLY ASN ASN SEQRES 3 D 224 ILE GLY SER LYS SER VAL HIS TRP TYR GLN GLN LYS PRO SEQRES 4 D 224 GLY GLN ALA PRO VAL LEU VAL VAL TYR ASP ASP SER ASP SEQRES 5 D 224 ARG PRO SER GLY ILE PRO GLU ARG PHE SER GLY SER ASN SEQRES 6 D 224 SER GLY ASN THR ALA THR LEU THR ILE SER ARG VAL GLU SEQRES 7 D 224 ALA GLY ASP GLU ALA ASP TYR TYR CYS GLN VAL TRP ASP SEQRES 8 D 224 SER SER SER ASP HIS TYR VAL PHE GLY THR GLY THR LYS SEQRES 9 D 224 VAL THR VAL LEU ARG THR VAL ALA ALA PRO SER VAL PHE SEQRES 10 D 224 ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR SEQRES 11 D 224 ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG SEQRES 12 D 224 GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SEQRES 13 D 224 SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER SEQRES 14 D 224 LYS ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SEQRES 15 D 224 SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS SEQRES 16 D 224 GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SEQRES 17 D 224 SER PHE ASN ARG GLY GLU CYS GLY SER GLY HIS HIS HIS SEQRES 18 D 224 HIS HIS HIS HET NA A 301 1 HET GOL C 301 6 HET SO4 C 302 5 HET GOL D 301 6 HETNAM NA SODIUM ION HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 NA NA 1+ FORMUL 6 GOL 2(C3 H8 O3) FORMUL 7 SO4 O4 S 2- FORMUL 9 HOH *319(H2 O) HELIX 1 1 THR A 28 THR A 30 5 3 HELIX 2 2 GLN A 62 GLN A 65 5 4 HELIX 3 3 THR A 74 ILE A 76 5 3 HELIX 4 4 ARG A 87 THR A 91 5 5 HELIX 5 5 SER A 143 LYS A 145 5 3 HELIX 6 6 SER A 172 ALA A 174 5 3 HELIX 7 7 SER A 203 LEU A 205 5 3 HELIX 8 8 LYS A 217 ASN A 220 5 4 HELIX 9 9 THR B 28 THR B 30 5 3 HELIX 10 10 THR B 74 ILE B 76 5 3 HELIX 11 11 ARG B 87 THR B 91 5 5 HELIX 12 12 PRO B 102 SER B 107 1 6 HELIX 13 13 SER B 143 LYS B 145 5 3 HELIX 14 14 SER B 172 ALA B 174 5 3 HELIX 15 15 SER B 203 THR B 207 5 5 HELIX 16 16 LYS B 217 ASN B 220 5 4 HELIX 17 17 ASN C 26 LYS C 30 5 5 HELIX 18 18 SER C 122 LYS C 127 1 6 HELIX 19 19 LYS C 184 LYS C 189 1 6 HELIX 20 20 ASN D 26 LYS D 30 5 5 HELIX 21 21 GLU D 78 GLU D 82 5 5 HELIX 22 22 SER D 122 SER D 128 1 7 HELIX 23 23 LYS D 184 LYS D 189 1 6 SHEET 1 A 4 GLN A 3 GLN A 6 0 SHEET 2 A 4 VAL A 18 SER A 25 -1 O LYS A 23 N VAL A 5 SHEET 3 A 4 THR A 78 LEU A 83 -1 O MET A 81 N VAL A 20 SHEET 4 A 4 VAL A 68 ASP A 73 -1 N ASP A 73 O THR A 78 SHEET 1 B 6 GLU A 10 LYS A 12 0 SHEET 2 B 6 THR A 123 VAL A 127 1 O THR A 126 N LYS A 12 SHEET 3 B 6 ALA A 92 PRO A 100 -1 N TYR A 94 O THR A 123 SHEET 4 B 6 TYR A 32 GLN A 39 -1 N HIS A 35 O ALA A 97 SHEET 5 B 6 LEU A 45 ILE A 51 -1 O MET A 48 N TRP A 36 SHEET 6 B 6 THR A 58 TYR A 60 -1 O ASN A 59 N TRP A 50 SHEET 1 C 4 GLU A 10 LYS A 12 0 SHEET 2 C 4 THR A 123 VAL A 127 1 O THR A 126 N LYS A 12 SHEET 3 C 4 ALA A 92 PRO A 100 -1 N TYR A 94 O THR A 123 SHEET 4 C 4 ILE A 118 TRP A 119 -1 O ILE A 118 N ARG A 98 SHEET 1 D 4 SER A 136 LEU A 140 0 SHEET 2 D 4 THR A 151 TYR A 161 -1 O LEU A 157 N PHE A 138 SHEET 3 D 4 TYR A 192 PRO A 201 -1 O VAL A 200 N ALA A 152 SHEET 4 D 4 VAL A 179 THR A 181 -1 N HIS A 180 O VAL A 197 SHEET 1 E 4 THR A 147 SER A 148 0 SHEET 2 E 4 THR A 151 TYR A 161 -1 O THR A 151 N SER A 148 SHEET 3 E 4 TYR A 192 PRO A 201 -1 O VAL A 200 N ALA A 152 SHEET 4 E 4 VAL A 185 LEU A 186 -1 N VAL A 185 O SER A 193 SHEET 1 F 3 THR A 167 TRP A 170 0 SHEET 2 F 3 TYR A 210 HIS A 216 -1 O ASN A 213 N SER A 169 SHEET 3 F 3 THR A 221 VAL A 227 -1 O VAL A 227 N TYR A 210 SHEET 1 G 4 GLN B 3 GLN B 6 0 SHEET 2 G 4 VAL B 18 SER B 25 -1 O LYS B 23 N VAL B 5 SHEET 3 G 4 THR B 78 LEU B 83 -1 O ALA B 79 N CYS B 22 SHEET 4 G 4 VAL B 68 ASP B 73 -1 N ASP B 73 O THR B 78 SHEET 1 H 6 GLU B 10 LYS B 12 0 SHEET 2 H 6 THR B 123 VAL B 127 1 O THR B 126 N GLU B 10 SHEET 3 H 6 ALA B 92 PRO B 100 -1 N ALA B 92 O VAL B 125 SHEET 4 H 6 TYR B 32 GLN B 39 -1 N HIS B 35 O ALA B 97 SHEET 5 H 6 GLU B 46 ILE B 51 -1 O MET B 48 N TRP B 36 SHEET 6 H 6 THR B 58 TYR B 60 -1 O ASN B 59 N TRP B 50 SHEET 1 I 4 GLU B 10 LYS B 12 0 SHEET 2 I 4 THR B 123 VAL B 127 1 O THR B 126 N GLU B 10 SHEET 3 I 4 ALA B 92 PRO B 100 -1 N ALA B 92 O VAL B 125 SHEET 4 I 4 ILE B 118 TRP B 119 -1 O ILE B 118 N ARG B 98 SHEET 1 J 4 SER B 136 LEU B 140 0 SHEET 2 J 4 THR B 151 TYR B 161 -1 O LEU B 157 N PHE B 138 SHEET 3 J 4 TYR B 192 PRO B 201 -1 O LEU B 194 N VAL B 158 SHEET 4 J 4 VAL B 179 THR B 181 -1 N HIS B 180 O VAL B 197 SHEET 1 K 4 THR B 147 SER B 148 0 SHEET 2 K 4 THR B 151 TYR B 161 -1 O THR B 151 N SER B 148 SHEET 3 K 4 TYR B 192 PRO B 201 -1 O LEU B 194 N VAL B 158 SHEET 4 K 4 VAL B 185 LEU B 186 -1 N VAL B 185 O SER B 193 SHEET 1 L 3 THR B 167 TRP B 170 0 SHEET 2 L 3 TYR B 210 HIS B 216 -1 O ASN B 213 N SER B 169 SHEET 3 L 3 THR B 221 VAL B 227 -1 O VAL B 227 N TYR B 210 SHEET 1 M 5 SER C 9 VAL C 12 0 SHEET 2 M 5 THR C 103 VAL C 107 1 O THR C 106 N VAL C 12 SHEET 3 M 5 ASP C 84 ASP C 91 -1 N TYR C 85 O THR C 103 SHEET 4 M 5 HIS C 33 GLN C 37 -1 N GLN C 37 O ASP C 84 SHEET 5 M 5 VAL C 44 VAL C 47 -1 O VAL C 47 N TRP C 34 SHEET 1 N 4 SER C 9 VAL C 12 0 SHEET 2 N 4 THR C 103 VAL C 107 1 O THR C 106 N VAL C 12 SHEET 3 N 4 ASP C 84 ASP C 91 -1 N TYR C 85 O THR C 103 SHEET 4 N 4 HIS C 96 PHE C 99 -1 O HIS C 96 N ASP C 91 SHEET 1 O 3 ALA C 18 GLY C 23 0 SHEET 2 O 3 THR C 69 ILE C 74 -1 O ILE C 74 N ALA C 18 SHEET 3 O 3 PHE C 61 SER C 66 -1 N SER C 62 O THR C 73 SHEET 1 P 4 SER C 115 PHE C 119 0 SHEET 2 P 4 THR C 130 PHE C 140 -1 O LEU C 136 N PHE C 117 SHEET 3 P 4 TYR C 174 SER C 183 -1 O LEU C 180 N VAL C 133 SHEET 4 P 4 SER C 160 VAL C 164 -1 N GLN C 161 O THR C 179 SHEET 1 Q 4 ALA C 154 LEU C 155 0 SHEET 2 Q 4 LYS C 146 VAL C 151 -1 N VAL C 151 O ALA C 154 SHEET 3 Q 4 VAL C 192 THR C 198 -1 O GLU C 196 N GLN C 148 SHEET 4 Q 4 VAL C 206 ASN C 211 -1 O LYS C 208 N CYS C 195 SHEET 1 R 5 SER D 9 VAL D 12 0 SHEET 2 R 5 THR D 103 VAL D 107 1 O THR D 106 N VAL D 10 SHEET 3 R 5 ALA D 83 TRP D 90 -1 N TYR D 85 O THR D 103 SHEET 4 R 5 VAL D 32 GLN D 37 -1 N GLN D 37 O ASP D 84 SHEET 5 R 5 VAL D 44 VAL D 47 -1 O VAL D 47 N TRP D 34 SHEET 1 S 4 SER D 9 VAL D 12 0 SHEET 2 S 4 THR D 103 VAL D 107 1 O THR D 106 N VAL D 10 SHEET 3 S 4 ALA D 83 TRP D 90 -1 N TYR D 85 O THR D 103 SHEET 4 S 4 TYR D 97 PHE D 99 -1 O VAL D 98 N VAL D 89 SHEET 1 T 3 ALA D 18 GLY D 23 0 SHEET 2 T 3 THR D 69 ILE D 74 -1 O ALA D 70 N CYS D 22 SHEET 3 T 3 PHE D 61 SER D 66 -1 N SER D 62 O THR D 73 SHEET 1 U 4 SER D 115 PHE D 119 0 SHEET 2 U 4 THR D 130 PHE D 140 -1 O LEU D 136 N PHE D 117 SHEET 3 U 4 TYR D 174 SER D 183 -1 O LEU D 182 N ALA D 131 SHEET 4 U 4 SER D 160 VAL D 164 -1 N GLN D 161 O THR D 179 SHEET 1 V 4 ALA D 154 LEU D 155 0 SHEET 2 V 4 LYS D 146 VAL D 151 -1 N VAL D 151 O ALA D 154 SHEET 3 V 4 TYR D 193 THR D 198 -1 O GLU D 196 N GLN D 148 SHEET 4 V 4 VAL D 206 PHE D 210 -1 O VAL D 206 N VAL D 197 SSBOND 1 CYS A 22 CYS A 96 1555 1555 2.04 SSBOND 2 CYS A 156 CYS A 212 1555 1555 2.03 SSBOND 3 CYS B 22 CYS B 96 1555 1555 2.04 SSBOND 4 CYS B 156 CYS B 212 1555 1555 2.03 SSBOND 5 CYS C 22 CYS C 87 1555 1555 2.04 SSBOND 6 CYS C 135 CYS C 195 1555 1555 2.03 SSBOND 7 CYS D 22 CYS D 87 1555 1555 2.04 SSBOND 8 CYS D 135 CYS D 195 1555 1555 2.03 LINK OG SER A 7 NA NA A 301 1555 1555 2.56 LINK O GLY A 8 NA NA A 301 1555 1555 2.65 LINK OE2 GLU A 10 NA NA A 301 1555 1555 2.78 CISPEP 1 TYR A 104 TYR A 105 0 -9.55 CISPEP 2 PHE A 162 PRO A 163 0 -1.74 CISPEP 3 GLU A 164 PRO A 165 0 0.63 CISPEP 4 PHE B 162 PRO B 163 0 -0.92 CISPEP 5 GLU B 164 PRO B 165 0 2.76 CISPEP 6 TYR C 141 PRO C 142 0 1.40 CISPEP 7 GLU C 214 CYS C 215 0 -4.52 CISPEP 8 TYR D 141 PRO D 142 0 0.39 SITE 1 AC1 4 SER A 7 GLY A 8 GLU A 10 THR A 123 SITE 1 AC2 7 GLY C 3 GLY C 24 ASN C 25 ASN C 26 SITE 2 AC2 7 ILE C 27 LYS C 30 ASP C 91 SITE 1 AC3 4 ARG C 109 LYS C 170 ASP C 171 THR D 198 SITE 1 AC4 4 GLN D 36 PRO D 58 HOH D 409 HOH D 475 CRYST1 65.969 86.670 205.813 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015159 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011538 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004859 0.00000