data_4IOP # _entry.id 4IOP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4IOP RCSB RCSB077016 WWPDB D_1000077016 # _pdbx_database_status.entry_id 4IOP _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-01-08 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Li, Y.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Structure of NKp65 bound to its keratinocyte ligand reveals basis for genetically linked recognition in natural killer gene complex. ; _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 110 _citation.page_first 11505 _citation.page_last 11510 _citation.year 2013 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23803857 _citation.pdbx_database_id_DOI 10.1073/pnas.1303300110 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Li, Y.' 1 ? primary 'Wang, Q.' 2 ? primary 'Chen, S.' 3 ? primary 'Brown, P.H.' 4 ? primary 'Mariuzza, R.A.' 5 ? # _cell.entry_id 4IOP _cell.length_a 74.640 _cell.length_b 74.640 _cell.length_c 271.080 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4IOP _symmetry.space_group_name_H-M 'I 41 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'C-type lectin domain family 2 member A' 16239.239 1 ? ? ? ? 2 polymer man 'Killer cell lectin-like receptor subfamily F member 2' 17967.986 1 ? ? ? ? 3 branched man 'alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 586.542 2 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Keratinocyte-associated C-type lectin, KACL, Proliferation-induced lymphocyte-associated receptor, PILAR' 2 'Lectin-like receptor F2, Activating coreceptor NKp65' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;DLGSIATWSKHAKPVACSGDWLGVRDKCFYFSDDTRNWTASKIFCSLQKAELAQIDTQEDMEFLKRYAGTDMHWIGLSRK QGDSWKWTNGTTFNGWFEIIGNGSFAFLSADGVHSSRGFIDIKWICSKPKYFLAAAHHHHHH ; ;DLGSIATWSKHAKPVACSGDWLGVRDKCFYFSDDTRNWTASKIFCSLQKAELAQIDTQEDMEFLKRYAGTDMHWIGLSRK QGDSWKWTNGTTFNGWFEIIGNGSFAFLSADGVHSSRGFIDIKWICSKPKYFLAAAHHHHHH ; A ? 2 'polypeptide(L)' no no ;DLGSSQNVNVSSLSGHNYLCPNDWLLNEGKCYWFSTSFKTWKESQRDCTQLQAHLLVIQNLDELEFIQNSLKPGHFGWIG LYVTFQGNLWMWIDEHFLVPELFSVIGPTDDRSCAVITGNWVYSEDCSSTFKGICQRDAILTHNGTSGVAAAHHHHHH ; ;DLGSSQNVNVSSLSGHNYLCPNDWLLNEGKCYWFSTSFKTWKESQRDCTQLQAHLLVIQNLDELEFIQNSLKPGHFGWIG LYVTFQGNLWMWIDEHFLVPELFSVIGPTDDRSCAVITGNWVYSEDCSSTFKGICQRDAILTHNGTSGVAAAHHHHHH ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 LEU n 1 3 GLY n 1 4 SER n 1 5 ILE n 1 6 ALA n 1 7 THR n 1 8 TRP n 1 9 SER n 1 10 LYS n 1 11 HIS n 1 12 ALA n 1 13 LYS n 1 14 PRO n 1 15 VAL n 1 16 ALA n 1 17 CYS n 1 18 SER n 1 19 GLY n 1 20 ASP n 1 21 TRP n 1 22 LEU n 1 23 GLY n 1 24 VAL n 1 25 ARG n 1 26 ASP n 1 27 LYS n 1 28 CYS n 1 29 PHE n 1 30 TYR n 1 31 PHE n 1 32 SER n 1 33 ASP n 1 34 ASP n 1 35 THR n 1 36 ARG n 1 37 ASN n 1 38 TRP n 1 39 THR n 1 40 ALA n 1 41 SER n 1 42 LYS n 1 43 ILE n 1 44 PHE n 1 45 CYS n 1 46 SER n 1 47 LEU n 1 48 GLN n 1 49 LYS n 1 50 ALA n 1 51 GLU n 1 52 LEU n 1 53 ALA n 1 54 GLN n 1 55 ILE n 1 56 ASP n 1 57 THR n 1 58 GLN n 1 59 GLU n 1 60 ASP n 1 61 MET n 1 62 GLU n 1 63 PHE n 1 64 LEU n 1 65 LYS n 1 66 ARG n 1 67 TYR n 1 68 ALA n 1 69 GLY n 1 70 THR n 1 71 ASP n 1 72 MET n 1 73 HIS n 1 74 TRP n 1 75 ILE n 1 76 GLY n 1 77 LEU n 1 78 SER n 1 79 ARG n 1 80 LYS n 1 81 GLN n 1 82 GLY n 1 83 ASP n 1 84 SER n 1 85 TRP n 1 86 LYS n 1 87 TRP n 1 88 THR n 1 89 ASN n 1 90 GLY n 1 91 THR n 1 92 THR n 1 93 PHE n 1 94 ASN n 1 95 GLY n 1 96 TRP n 1 97 PHE n 1 98 GLU n 1 99 ILE n 1 100 ILE n 1 101 GLY n 1 102 ASN n 1 103 GLY n 1 104 SER n 1 105 PHE n 1 106 ALA n 1 107 PHE n 1 108 LEU n 1 109 SER n 1 110 ALA n 1 111 ASP n 1 112 GLY n 1 113 VAL n 1 114 HIS n 1 115 SER n 1 116 SER n 1 117 ARG n 1 118 GLY n 1 119 PHE n 1 120 ILE n 1 121 ASP n 1 122 ILE n 1 123 LYS n 1 124 TRP n 1 125 ILE n 1 126 CYS n 1 127 SER n 1 128 LYS n 1 129 PRO n 1 130 LYS n 1 131 TYR n 1 132 PHE n 1 133 LEU n 1 134 ALA n 1 135 ALA n 1 136 ALA n 1 137 HIS n 1 138 HIS n 1 139 HIS n 1 140 HIS n 1 141 HIS n 1 142 HIS n 2 1 ASP n 2 2 LEU n 2 3 GLY n 2 4 SER n 2 5 SER n 2 6 GLN n 2 7 ASN n 2 8 VAL n 2 9 ASN n 2 10 VAL n 2 11 SER n 2 12 SER n 2 13 LEU n 2 14 SER n 2 15 GLY n 2 16 HIS n 2 17 ASN n 2 18 TYR n 2 19 LEU n 2 20 CYS n 2 21 PRO n 2 22 ASN n 2 23 ASP n 2 24 TRP n 2 25 LEU n 2 26 LEU n 2 27 ASN n 2 28 GLU n 2 29 GLY n 2 30 LYS n 2 31 CYS n 2 32 TYR n 2 33 TRP n 2 34 PHE n 2 35 SER n 2 36 THR n 2 37 SER n 2 38 PHE n 2 39 LYS n 2 40 THR n 2 41 TRP n 2 42 LYS n 2 43 GLU n 2 44 SER n 2 45 GLN n 2 46 ARG n 2 47 ASP n 2 48 CYS n 2 49 THR n 2 50 GLN n 2 51 LEU n 2 52 GLN n 2 53 ALA n 2 54 HIS n 2 55 LEU n 2 56 LEU n 2 57 VAL n 2 58 ILE n 2 59 GLN n 2 60 ASN n 2 61 LEU n 2 62 ASP n 2 63 GLU n 2 64 LEU n 2 65 GLU n 2 66 PHE n 2 67 ILE n 2 68 GLN n 2 69 ASN n 2 70 SER n 2 71 LEU n 2 72 LYS n 2 73 PRO n 2 74 GLY n 2 75 HIS n 2 76 PHE n 2 77 GLY n 2 78 TRP n 2 79 ILE n 2 80 GLY n 2 81 LEU n 2 82 TYR n 2 83 VAL n 2 84 THR n 2 85 PHE n 2 86 GLN n 2 87 GLY n 2 88 ASN n 2 89 LEU n 2 90 TRP n 2 91 MET n 2 92 TRP n 2 93 ILE n 2 94 ASP n 2 95 GLU n 2 96 HIS n 2 97 PHE n 2 98 LEU n 2 99 VAL n 2 100 PRO n 2 101 GLU n 2 102 LEU n 2 103 PHE n 2 104 SER n 2 105 VAL n 2 106 ILE n 2 107 GLY n 2 108 PRO n 2 109 THR n 2 110 ASP n 2 111 ASP n 2 112 ARG n 2 113 SER n 2 114 CYS n 2 115 ALA n 2 116 VAL n 2 117 ILE n 2 118 THR n 2 119 GLY n 2 120 ASN n 2 121 TRP n 2 122 VAL n 2 123 TYR n 2 124 SER n 2 125 GLU n 2 126 ASP n 2 127 CYS n 2 128 SER n 2 129 SER n 2 130 THR n 2 131 PHE n 2 132 LYS n 2 133 GLY n 2 134 ILE n 2 135 CYS n 2 136 GLN n 2 137 ARG n 2 138 ASP n 2 139 ALA n 2 140 ILE n 2 141 LEU n 2 142 THR n 2 143 HIS n 2 144 ASN n 2 145 GLY n 2 146 THR n 2 147 SER n 2 148 GLY n 2 149 VAL n 2 150 ALA n 2 151 ALA n 2 152 ALA n 2 153 HIS n 2 154 HIS n 2 155 HIS n 2 156 HIS n 2 157 HIS n 2 158 HIS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? human ? 'CLEC2A, KACL, UNQ5792/PRO19597' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? 'fall armyworm' 'Spodoptera frugiperda' 7108 ? ? ? ? ? ? ? ? SF9 ? ? ? ? ? plasmid Baculovirus ? ? pAcGP67-B ? ? 2 1 sample ? ? ? human ? KLRF2 ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? 'fall armyworm' 'Spodoptera frugiperda' 7108 ? ? ? ? ? ? ? ? SF9 ? ? ? ? ? plasmid Baculovirus ? ? pAcGP67-B ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP CLC2A_HUMAN Q6UVW9 1 ;IATWSKHAKPVACSGDWLGVRDKCFYFSDDTRNWTASKIFCSLQKAELAQIDTQEDMEFLKRYAGTDMHWIGLSRKQGDS WKWTNGTTFNGWFEIIGNGSFAFLSADGVHSSRGFIDIKWICSKPKYFL ; 46 ? 2 UNP KLRF2_HUMAN D3W0D1 2 ;SQNVNVSSLSGHNYLCPNDWLLNEGKCYWFSTSFKTWKESQRDCTQLQAHLLVIQNLDELEFIQNSLKPGHFGWIGLYVT FQGNLWMWIDEHFLVPELFSVIGPTDDRSCAVITGNWVYSEDCSSTFKGICQRDAILTHNGTSGV ; 63 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4IOP A 5 ? 133 ? Q6UVW9 46 ? 174 ? 46 174 2 2 4IOP B 5 ? 149 ? D3W0D1 63 ? 207 ? 63 207 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4IOP ASP A 1 ? UNP Q6UVW9 ? ? 'expression tag' 42 1 1 4IOP LEU A 2 ? UNP Q6UVW9 ? ? 'expression tag' 43 2 1 4IOP GLY A 3 ? UNP Q6UVW9 ? ? 'expression tag' 44 3 1 4IOP SER A 4 ? UNP Q6UVW9 ? ? 'expression tag' 45 4 1 4IOP ALA A 134 ? UNP Q6UVW9 ? ? 'expression tag' 175 5 1 4IOP ALA A 135 ? UNP Q6UVW9 ? ? 'expression tag' 176 6 1 4IOP ALA A 136 ? UNP Q6UVW9 ? ? 'expression tag' 177 7 1 4IOP HIS A 137 ? UNP Q6UVW9 ? ? 'expression tag' 178 8 1 4IOP HIS A 138 ? UNP Q6UVW9 ? ? 'expression tag' 179 9 1 4IOP HIS A 139 ? UNP Q6UVW9 ? ? 'expression tag' 180 10 1 4IOP HIS A 140 ? UNP Q6UVW9 ? ? 'expression tag' 181 11 1 4IOP HIS A 141 ? UNP Q6UVW9 ? ? 'expression tag' 182 12 1 4IOP HIS A 142 ? UNP Q6UVW9 ? ? 'expression tag' 183 13 2 4IOP ASP B 1 ? UNP D3W0D1 ? ? 'expression tag' 59 14 2 4IOP LEU B 2 ? UNP D3W0D1 ? ? 'expression tag' 60 15 2 4IOP GLY B 3 ? UNP D3W0D1 ? ? 'expression tag' 61 16 2 4IOP SER B 4 ? UNP D3W0D1 ? ? 'expression tag' 62 17 2 4IOP ALA B 150 ? UNP D3W0D1 ? ? 'expression tag' 208 18 2 4IOP ALA B 151 ? UNP D3W0D1 ? ? 'expression tag' 209 19 2 4IOP ALA B 152 ? UNP D3W0D1 ? ? 'expression tag' 210 20 2 4IOP HIS B 153 ? UNP D3W0D1 ? ? 'expression tag' 211 21 2 4IOP HIS B 154 ? UNP D3W0D1 ? ? 'expression tag' 212 22 2 4IOP HIS B 155 ? UNP D3W0D1 ? ? 'expression tag' 213 23 2 4IOP HIS B 156 ? UNP D3W0D1 ? ? 'expression tag' 214 24 2 4IOP HIS B 157 ? UNP D3W0D1 ? ? 'expression tag' 215 25 2 4IOP HIS B 158 ? UNP D3W0D1 ? ? 'expression tag' 216 26 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose ? 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4IOP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.76 _exptl_crystal.density_percent_sol 55.42 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'PEG 1000, NaCl, pH 6.0, temperature 298K, VAPOR DIFFUSION, HANGING DROP' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type SIEMENS-NICOLET _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.502 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X29A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X29A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.502 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4IOP _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 71.962 _reflns.d_resolution_high 3.200 _reflns.number_obs 6745 _reflns.number_all ? _reflns.percent_possible_obs 99.700 _reflns.pdbx_Rmerge_I_obs 0.091 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 33.150 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared 1 1 3.200 3.280 100.000 0.479 ? 5.810 ? ? ? ? ? ? ? 1 2 3.280 3.370 99.800 0.469 ? 6.290 ? ? ? ? ? ? ? 1 3 3.370 3.470 99.800 0.396 ? 7.830 ? ? ? ? ? ? ? 1 4 3.470 3.580 99.600 0.364 ? 9.430 ? ? ? ? ? ? ? 1 5 3.580 3.700 99.800 0.324 ? 11.330 ? ? ? ? ? ? ? 1 6 3.700 3.830 99.800 0.248 ? 15.380 ? ? ? ? ? ? ? 1 7 3.830 3.970 99.800 0.199 ? 19.800 ? ? ? ? ? ? ? 1 8 3.970 4.130 99.500 0.167 ? 23.660 ? ? ? ? ? ? ? 1 9 4.130 4.320 100.000 0.130 ? 30.660 ? ? ? ? ? ? ? 1 10 4.320 4.530 99.700 0.107 ? 36.640 ? ? ? ? ? ? ? 1 11 4.530 4.770 100.0 0.082 ? 45.210 ? ? ? ? ? ? ? 1 12 4.770 5.060 100.000 0.080 ? 45.660 ? ? ? ? ? ? ? 1 13 5.060 5.410 100.000 0.080 ? 48.560 ? ? ? ? ? ? ? 1 14 5.410 5.840 100.000 0.071 ? 51.930 ? ? ? ? ? ? ? 1 15 5.840 6.400 99.600 0.061 ? 59.690 ? ? ? ? ? ? ? 1 16 6.400 7.160 100.0 0.057 ? 63.470 ? ? ? ? ? ? ? 1 17 7.160 8.260 100.000 0.040 ? 75.520 ? ? ? ? ? ? ? 1 18 8.260 10.120 99.500 0.029 ? 98.770 ? ? ? ? ? ? ? 1 19 10.120 14.310 100.000 0.025 ? 107.260 ? ? ? ? ? ? ? 1 20 14.310 ? 91.700 0.022 ? 89.710 ? ? ? ? ? ? ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4IOP _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 6727 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.00 _refine.ls_d_res_high 3.20 _refine.ls_percent_reflns_obs 99.8 _refine.ls_R_factor_obs 0.252 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.252 _refine.ls_R_factor_R_free 0.297 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 11.100 _refine.ls_number_reflns_R_free 749 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 1.000 _refine.occupancy_max 1.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 99.66 _refine.aniso_B[1][1] 4.99300 _refine.aniso_B[2][2] 4.99300 _refine.aniso_B[3][3] -9.98600 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol 31.05 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1879 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 78 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1957 _refine_hist.d_res_high 3.20 _refine_hist.d_res_low 50.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' 14 3.2000 3.2800 408 0.4105 . 0.4563 . . 57 465 . . . 'X-RAY DIFFRACTION' 14 3.2800 3.3700 398 0.3566 . 0.3646 . . 61 459 . . . 'X-RAY DIFFRACTION' 14 3.3700 3.4700 407 0.3348 . 0.3528 . . 57 464 . . . 'X-RAY DIFFRACTION' 14 3.4700 3.5800 430 0.3142 . 0.2991 . . 39 469 . . . 'X-RAY DIFFRACTION' 14 3.5800 3.7100 423 0.3128 . 0.3546 . . 51 474 . . . 'X-RAY DIFFRACTION' 14 3.7100 3.8600 419 0.2813 . 0.3690 . . 42 461 . . . 'X-RAY DIFFRACTION' 14 3.8600 4.0300 419 0.2766 . 0.3610 . . 54 473 . . . 'X-RAY DIFFRACTION' 14 4.0300 4.2400 434 0.2345 . 0.3035 . . 45 479 . . . 'X-RAY DIFFRACTION' 14 4.2400 4.5100 424 0.2012 . 0.2626 . . 55 479 . . . 'X-RAY DIFFRACTION' 14 4.5100 4.8600 427 0.1989 . 0.2765 . . 61 488 . . . 'X-RAY DIFFRACTION' 14 4.8600 5.3500 422 0.2159 . 0.2660 . . 57 479 . . . 'X-RAY DIFFRACTION' 14 5.3500 6.1200 436 0.1907 . 0.2485 . . 52 488 . . . 'X-RAY DIFFRACTION' 14 6.1200 7.7000 447 0.1986 . 0.2605 . . 57 504 . . . 'X-RAY DIFFRACTION' 14 7.7000 50.0000 484 0.2617 . 0.2577 . . 61 545 . . . # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 CNS_TOPPAR:protein_rep.param ? 'X-RAY DIFFRACTION' 2 CNS_TOPPAR:carbohydrate.param ? # _struct.entry_id 4IOP _struct.title 'Crystal structure of NKp65 bound to its ligand KACL' _struct.pdbx_descriptor 'C-type lectin domain family 2 member A, Killer cell lectin-like receptor subfamily F member 2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4IOP _struct_keywords.text 'NK cell receptor, receptor-ligand complex, IMMUNE SYSTEM' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 37 ? LEU A 47 ? ASN A 78 LEU A 88 1 ? 11 HELX_P HELX_P2 2 THR A 57 ? TYR A 67 ? THR A 98 TYR A 108 1 ? 11 HELX_P HELX_P3 3 TRP B 41 ? GLN B 50 ? TRP B 99 GLN B 108 1 ? 10 HELX_P HELX_P4 4 ASN B 60 ? GLN B 68 ? ASN B 118 GLN B 126 1 ? 9 HELX_P HELX_P5 5 ASN B 69 ? LEU B 71 ? ASN B 127 LEU B 129 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 17 SG ? ? ? 1_555 A CYS 28 SG ? ? A CYS 58 A CYS 69 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf2 disulf ? ? A CYS 45 SG ? ? ? 1_555 A CYS 126 SG ? ? A CYS 86 A CYS 167 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf3 disulf ? ? B CYS 20 SG ? ? ? 1_555 B CYS 31 SG ? ? B CYS 78 B CYS 89 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf4 disulf ? ? B CYS 48 SG ? ? ? 1_555 B CYS 135 SG ? ? B CYS 106 B CYS 193 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf5 disulf ? ? B CYS 114 SG ? ? ? 1_555 B CYS 127 SG ? ? B CYS 172 B CYS 185 1_555 ? ? ? ? ? ? ? 2.043 ? ? covale1 covale one ? A ASN 37 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 78 D NAG 1 1_555 ? ? ? ? ? ? ? 1.460 ? N-Glycosylation covale2 covale one ? A ASN 89 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 130 C NAG 1 1_555 ? ? ? ? ? ? ? 1.464 ? N-Glycosylation covale3 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.405 ? ? covale4 covale both ? C NAG . O4 ? ? ? 1_555 C MAN . C1 ? ? C NAG 2 C MAN 3 1_555 ? ? ? ? ? ? ? 1.401 ? ? covale5 covale both ? D NAG . O4 ? ? ? 1_555 D NAG . C1 ? ? D NAG 1 D NAG 2 1_555 ? ? ? ? ? ? ? 1.369 ? ? covale6 covale both ? D NAG . O4 ? ? ? 1_555 D MAN . C1 ? ? D NAG 2 D MAN 3 1_555 ? ? ? ? ? ? ? 1.390 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? C ? 4 ? D ? 2 ? E ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel E 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 22 ? VAL A 24 ? LEU A 63 VAL A 65 A 2 LYS A 27 ? PHE A 31 ? LYS A 68 PHE A 72 A 3 LYS A 123 ? PRO A 129 ? LYS A 164 PRO A 170 A 4 HIS A 73 ? ARG A 79 ? HIS A 114 ARG A 120 A 5 TRP A 85 ? LYS A 86 ? TRP A 126 LYS A 127 B 1 GLU A 51 ? LEU A 52 ? GLU A 92 LEU A 93 B 2 LYS A 123 ? PRO A 129 ? LYS A 164 PRO A 170 B 3 HIS A 73 ? ARG A 79 ? HIS A 114 ARG A 120 B 4 PHE A 105 ? LEU A 108 ? PHE A 146 LEU A 149 B 5 VAL A 113 ? SER A 116 ? VAL A 154 SER A 157 C 1 LEU B 25 ? ASN B 27 ? LEU B 83 ASN B 85 C 2 LYS B 30 ? TRP B 33 ? LYS B 88 TRP B 91 C 3 CYS B 135 ? ARG B 137 ? CYS B 193 ARG B 195 C 4 HIS B 54 ? LEU B 55 ? HIS B 112 LEU B 113 D 1 PHE B 38 ? THR B 40 ? PHE B 96 THR B 98 D 2 THR B 130 ? LYS B 132 ? THR B 188 LYS B 190 E 1 HIS B 96 ? PHE B 97 ? HIS B 154 PHE B 155 E 2 TRP B 90 ? TRP B 92 ? TRP B 148 TRP B 150 E 3 PHE B 76 ? VAL B 83 ? PHE B 134 VAL B 141 E 4 SER B 113 ? THR B 118 ? SER B 171 THR B 176 E 5 VAL B 122 ? ASP B 126 ? VAL B 180 ASP B 184 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 22 ? N LEU A 63 O PHE A 29 ? O PHE A 70 A 2 3 N TYR A 30 ? N TYR A 71 O CYS A 126 ? O CYS A 167 A 3 4 O ILE A 125 ? O ILE A 166 N TRP A 74 ? N TRP A 115 A 4 5 N SER A 78 ? N SER A 119 O LYS A 86 ? O LYS A 127 B 1 2 N GLU A 51 ? N GLU A 92 O SER A 127 ? O SER A 168 B 2 3 O ILE A 125 ? O ILE A 166 N TRP A 74 ? N TRP A 115 B 3 4 N HIS A 73 ? N HIS A 114 O LEU A 108 ? O LEU A 149 B 4 5 N PHE A 107 ? N PHE A 148 O HIS A 114 ? O HIS A 155 C 1 2 N ASN B 27 ? N ASN B 85 O LYS B 30 ? O LYS B 88 C 2 3 N CYS B 31 ? N CYS B 89 O ARG B 137 ? O ARG B 195 C 3 4 O GLN B 136 ? O GLN B 194 N HIS B 54 ? N HIS B 112 D 1 2 N LYS B 39 ? N LYS B 97 O PHE B 131 ? O PHE B 189 E 1 2 O HIS B 96 ? O HIS B 154 N TRP B 92 ? N TRP B 150 E 2 3 O MET B 91 ? O MET B 149 N TYR B 82 ? N TYR B 140 E 3 4 N VAL B 83 ? N VAL B 141 O SER B 113 ? O SER B 171 E 4 5 N CYS B 114 ? N CYS B 172 O GLU B 125 ? O GLU B 183 # _atom_sites.entry_id 4IOP _atom_sites.fract_transf_matrix[1][1] 0.013398 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013398 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003689 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 42 ? ? ? A . n A 1 2 LEU 2 43 ? ? ? A . n A 1 3 GLY 3 44 ? ? ? A . n A 1 4 SER 4 45 ? ? ? A . n A 1 5 ILE 5 46 ? ? ? A . n A 1 6 ALA 6 47 ? ? ? A . n A 1 7 THR 7 48 ? ? ? A . n A 1 8 TRP 8 49 ? ? ? A . n A 1 9 SER 9 50 ? ? ? A . n A 1 10 LYS 10 51 ? ? ? A . n A 1 11 HIS 11 52 ? ? ? A . n A 1 12 ALA 12 53 ? ? ? A . n A 1 13 LYS 13 54 ? ? ? A . n A 1 14 PRO 14 55 ? ? ? A . n A 1 15 VAL 15 56 56 VAL GLY A . n A 1 16 ALA 16 57 57 ALA GLY A . n A 1 17 CYS 17 58 58 CYS CYS A . n A 1 18 SER 18 59 59 SER SER A . n A 1 19 GLY 19 60 60 GLY GLY A . n A 1 20 ASP 20 61 61 ASP ASP A . n A 1 21 TRP 21 62 62 TRP TRP A . n A 1 22 LEU 22 63 63 LEU LEU A . n A 1 23 GLY 23 64 64 GLY GLY A . n A 1 24 VAL 24 65 65 VAL VAL A . n A 1 25 ARG 25 66 66 ARG ARG A . n A 1 26 ASP 26 67 67 ASP ASP A . n A 1 27 LYS 27 68 68 LYS LYS A . n A 1 28 CYS 28 69 69 CYS CYS A . n A 1 29 PHE 29 70 70 PHE PHE A . n A 1 30 TYR 30 71 71 TYR TYR A . n A 1 31 PHE 31 72 72 PHE PHE A . n A 1 32 SER 32 73 73 SER SER A . n A 1 33 ASP 33 74 74 ASP ASP A . n A 1 34 ASP 34 75 75 ASP ASP A . n A 1 35 THR 35 76 76 THR THR A . n A 1 36 ARG 36 77 77 ARG ARG A . n A 1 37 ASN 37 78 78 ASN ASN A . n A 1 38 TRP 38 79 79 TRP TRP A . n A 1 39 THR 39 80 80 THR THR A . n A 1 40 ALA 40 81 81 ALA ALA A . n A 1 41 SER 41 82 82 SER SER A . n A 1 42 LYS 42 83 83 LYS LYS A . n A 1 43 ILE 43 84 84 ILE ILE A . n A 1 44 PHE 44 85 85 PHE PHE A . n A 1 45 CYS 45 86 86 CYS CYS A . n A 1 46 SER 46 87 87 SER SER A . n A 1 47 LEU 47 88 88 LEU LEU A . n A 1 48 GLN 48 89 89 GLN GLN A . n A 1 49 LYS 49 90 90 LYS LYS A . n A 1 50 ALA 50 91 91 ALA ALA A . n A 1 51 GLU 51 92 92 GLU ALA A . n A 1 52 LEU 52 93 93 LEU LEU A . n A 1 53 ALA 53 94 94 ALA ALA A . n A 1 54 GLN 54 95 95 GLN GLN A . n A 1 55 ILE 55 96 96 ILE ILE A . n A 1 56 ASP 56 97 97 ASP ASP A . n A 1 57 THR 57 98 98 THR THR A . n A 1 58 GLN 58 99 99 GLN GLN A . n A 1 59 GLU 59 100 100 GLU ALA A . n A 1 60 ASP 60 101 101 ASP ASP A . n A 1 61 MET 61 102 102 MET MET A . n A 1 62 GLU 62 103 103 GLU GLU A . n A 1 63 PHE 63 104 104 PHE PHE A . n A 1 64 LEU 64 105 105 LEU LEU A . n A 1 65 LYS 65 106 106 LYS LYS A . n A 1 66 ARG 66 107 107 ARG ARG A . n A 1 67 TYR 67 108 108 TYR TYR A . n A 1 68 ALA 68 109 109 ALA ALA A . n A 1 69 GLY 69 110 110 GLY GLY A . n A 1 70 THR 70 111 111 THR THR A . n A 1 71 ASP 71 112 112 ASP ASP A . n A 1 72 MET 72 113 113 MET MET A . n A 1 73 HIS 73 114 114 HIS HIS A . n A 1 74 TRP 74 115 115 TRP TRP A . n A 1 75 ILE 75 116 116 ILE ILE A . n A 1 76 GLY 76 117 117 GLY GLY A . n A 1 77 LEU 77 118 118 LEU LEU A . n A 1 78 SER 78 119 119 SER SER A . n A 1 79 ARG 79 120 120 ARG ARG A . n A 1 80 LYS 80 121 121 LYS ALA A . n A 1 81 GLN 81 122 122 GLN GLN A . n A 1 82 GLY 82 123 123 GLY GLY A . n A 1 83 ASP 83 124 124 ASP ASP A . n A 1 84 SER 84 125 125 SER SER A . n A 1 85 TRP 85 126 126 TRP TRP A . n A 1 86 LYS 86 127 127 LYS ALA A . n A 1 87 TRP 87 128 128 TRP TRP A . n A 1 88 THR 88 129 129 THR THR A . n A 1 89 ASN 89 130 130 ASN ASN A . n A 1 90 GLY 90 131 131 GLY GLY A . n A 1 91 THR 91 132 132 THR THR A . n A 1 92 THR 92 133 133 THR THR A . n A 1 93 PHE 93 134 134 PHE PHE A . n A 1 94 ASN 94 135 135 ASN ASN A . n A 1 95 GLY 95 136 136 GLY GLY A . n A 1 96 TRP 96 137 137 TRP TRP A . n A 1 97 PHE 97 138 138 PHE PHE A . n A 1 98 GLU 98 139 139 GLU GLU A . n A 1 99 ILE 99 140 140 ILE ILE A . n A 1 100 ILE 100 141 141 ILE ILE A . n A 1 101 GLY 101 142 142 GLY GLY A . n A 1 102 ASN 102 143 143 ASN ASN A . n A 1 103 GLY 103 144 144 GLY GLY A . n A 1 104 SER 104 145 145 SER SER A . n A 1 105 PHE 105 146 146 PHE PHE A . n A 1 106 ALA 106 147 147 ALA ALA A . n A 1 107 PHE 107 148 148 PHE PHE A . n A 1 108 LEU 108 149 149 LEU LEU A . n A 1 109 SER 109 150 150 SER SER A . n A 1 110 ALA 110 151 151 ALA ALA A . n A 1 111 ASP 111 152 152 ASP ASP A . n A 1 112 GLY 112 153 153 GLY GLY A . n A 1 113 VAL 113 154 154 VAL VAL A . n A 1 114 HIS 114 155 155 HIS HIS A . n A 1 115 SER 115 156 156 SER SER A . n A 1 116 SER 116 157 157 SER SER A . n A 1 117 ARG 117 158 158 ARG ARG A . n A 1 118 GLY 118 159 159 GLY GLY A . n A 1 119 PHE 119 160 160 PHE PHE A . n A 1 120 ILE 120 161 161 ILE ILE A . n A 1 121 ASP 121 162 162 ASP ASP A . n A 1 122 ILE 122 163 163 ILE ILE A . n A 1 123 LYS 123 164 164 LYS LYS A . n A 1 124 TRP 124 165 165 TRP TRP A . n A 1 125 ILE 125 166 166 ILE ILE A . n A 1 126 CYS 126 167 167 CYS CYS A . n A 1 127 SER 127 168 168 SER SER A . n A 1 128 LYS 128 169 169 LYS LYS A . n A 1 129 PRO 129 170 170 PRO PRO A . n A 1 130 LYS 130 171 171 LYS LYS A . n A 1 131 TYR 131 172 172 TYR ALA A . n A 1 132 PHE 132 173 ? ? ? A . n A 1 133 LEU 133 174 ? ? ? A . n A 1 134 ALA 134 175 ? ? ? A . n A 1 135 ALA 135 176 ? ? ? A . n A 1 136 ALA 136 177 ? ? ? A . n A 1 137 HIS 137 178 ? ? ? A . n A 1 138 HIS 138 179 ? ? ? A . n A 1 139 HIS 139 180 ? ? ? A . n A 1 140 HIS 140 181 ? ? ? A . n A 1 141 HIS 141 182 ? ? ? A . n A 1 142 HIS 142 183 ? ? ? A . n B 2 1 ASP 1 59 ? ? ? B . n B 2 2 LEU 2 60 ? ? ? B . n B 2 3 GLY 3 61 ? ? ? B . n B 2 4 SER 4 62 ? ? ? B . n B 2 5 SER 5 63 ? ? ? B . n B 2 6 GLN 6 64 ? ? ? B . n B 2 7 ASN 7 65 ? ? ? B . n B 2 8 VAL 8 66 ? ? ? B . n B 2 9 ASN 9 67 ? ? ? B . n B 2 10 VAL 10 68 ? ? ? B . n B 2 11 SER 11 69 ? ? ? B . n B 2 12 SER 12 70 ? ? ? B . n B 2 13 LEU 13 71 ? ? ? B . n B 2 14 SER 14 72 ? ? ? B . n B 2 15 GLY 15 73 ? ? ? B . n B 2 16 HIS 16 74 ? ? ? B . n B 2 17 ASN 17 75 ? ? ? B . n B 2 18 TYR 18 76 76 TYR ALA B . n B 2 19 LEU 19 77 77 LEU ALA B . n B 2 20 CYS 20 78 78 CYS CYS B . n B 2 21 PRO 21 79 79 PRO PRO B . n B 2 22 ASN 22 80 80 ASN ALA B . n B 2 23 ASP 23 81 81 ASP ASP B . n B 2 24 TRP 24 82 82 TRP TRP B . n B 2 25 LEU 25 83 83 LEU LEU B . n B 2 26 LEU 26 84 84 LEU LEU B . n B 2 27 ASN 27 85 85 ASN ASN B . n B 2 28 GLU 28 86 86 GLU GLU B . n B 2 29 GLY 29 87 87 GLY GLY B . n B 2 30 LYS 30 88 88 LYS LYS B . n B 2 31 CYS 31 89 89 CYS CYS B . n B 2 32 TYR 32 90 90 TYR TYR B . n B 2 33 TRP 33 91 91 TRP TRP B . n B 2 34 PHE 34 92 92 PHE PHE B . n B 2 35 SER 35 93 93 SER SER B . n B 2 36 THR 36 94 94 THR THR B . n B 2 37 SER 37 95 95 SER SER B . n B 2 38 PHE 38 96 96 PHE PHE B . n B 2 39 LYS 39 97 97 LYS LYS B . n B 2 40 THR 40 98 98 THR THR B . n B 2 41 TRP 41 99 99 TRP TRP B . n B 2 42 LYS 42 100 100 LYS ALA B . n B 2 43 GLU 43 101 101 GLU GLU B . n B 2 44 SER 44 102 102 SER SER B . n B 2 45 GLN 45 103 103 GLN GLN B . n B 2 46 ARG 46 104 104 ARG ARG B . n B 2 47 ASP 47 105 105 ASP ASP B . n B 2 48 CYS 48 106 106 CYS CYS B . n B 2 49 THR 49 107 107 THR THR B . n B 2 50 GLN 50 108 108 GLN GLN B . n B 2 51 LEU 51 109 109 LEU LEU B . n B 2 52 GLN 52 110 110 GLN GLN B . n B 2 53 ALA 53 111 111 ALA ALA B . n B 2 54 HIS 54 112 112 HIS HIS B . n B 2 55 LEU 55 113 113 LEU LEU B . n B 2 56 LEU 56 114 114 LEU LEU B . n B 2 57 VAL 57 115 115 VAL VAL B . n B 2 58 ILE 58 116 116 ILE ILE B . n B 2 59 GLN 59 117 117 GLN ALA B . n B 2 60 ASN 60 118 118 ASN ASN B . n B 2 61 LEU 61 119 119 LEU LEU B . n B 2 62 ASP 62 120 120 ASP ASP B . n B 2 63 GLU 63 121 121 GLU GLU B . n B 2 64 LEU 64 122 122 LEU LEU B . n B 2 65 GLU 65 123 123 GLU ALA B . n B 2 66 PHE 66 124 124 PHE PHE B . n B 2 67 ILE 67 125 125 ILE ILE B . n B 2 68 GLN 68 126 126 GLN GLN B . n B 2 69 ASN 69 127 127 ASN ASN B . n B 2 70 SER 70 128 128 SER SER B . n B 2 71 LEU 71 129 129 LEU LEU B . n B 2 72 LYS 72 130 130 LYS LYS B . n B 2 73 PRO 73 131 131 PRO PRO B . n B 2 74 GLY 74 132 132 GLY GLY B . n B 2 75 HIS 75 133 133 HIS HIS B . n B 2 76 PHE 76 134 134 PHE PHE B . n B 2 77 GLY 77 135 135 GLY GLY B . n B 2 78 TRP 78 136 136 TRP TRP B . n B 2 79 ILE 79 137 137 ILE ILE B . n B 2 80 GLY 80 138 138 GLY GLY B . n B 2 81 LEU 81 139 139 LEU LEU B . n B 2 82 TYR 82 140 140 TYR TYR B . n B 2 83 VAL 83 141 141 VAL VAL B . n B 2 84 THR 84 142 142 THR THR B . n B 2 85 PHE 85 143 143 PHE PHE B . n B 2 86 GLN 86 144 144 GLN GLN B . n B 2 87 GLY 87 145 145 GLY GLY B . n B 2 88 ASN 88 146 146 ASN ASN B . n B 2 89 LEU 89 147 147 LEU LEU B . n B 2 90 TRP 90 148 148 TRP TRP B . n B 2 91 MET 91 149 149 MET MET B . n B 2 92 TRP 92 150 150 TRP TRP B . n B 2 93 ILE 93 151 151 ILE ILE B . n B 2 94 ASP 94 152 152 ASP ASP B . n B 2 95 GLU 95 153 153 GLU GLU B . n B 2 96 HIS 96 154 154 HIS HIS B . n B 2 97 PHE 97 155 155 PHE ALA B . n B 2 98 LEU 98 156 156 LEU LEU B . n B 2 99 VAL 99 157 157 VAL VAL B . n B 2 100 PRO 100 158 158 PRO PRO B . n B 2 101 GLU 101 159 159 GLU ALA B . n B 2 102 LEU 102 160 160 LEU LEU B . n B 2 103 PHE 103 161 161 PHE PHE B . n B 2 104 SER 104 162 162 SER SER B . n B 2 105 VAL 105 163 163 VAL ALA B . n B 2 106 ILE 106 164 164 ILE ALA B . n B 2 107 GLY 107 165 165 GLY GLY B . n B 2 108 PRO 108 166 166 PRO PRO B . n B 2 109 THR 109 167 167 THR THR B . n B 2 110 ASP 110 168 168 ASP ASP B . n B 2 111 ASP 111 169 169 ASP ASP B . n B 2 112 ARG 112 170 170 ARG ARG B . n B 2 113 SER 113 171 171 SER SER B . n B 2 114 CYS 114 172 172 CYS CYS B . n B 2 115 ALA 115 173 173 ALA ALA B . n B 2 116 VAL 116 174 174 VAL VAL B . n B 2 117 ILE 117 175 175 ILE ILE B . n B 2 118 THR 118 176 176 THR THR B . n B 2 119 GLY 119 177 177 GLY GLY B . n B 2 120 ASN 120 178 178 ASN ASN B . n B 2 121 TRP 121 179 179 TRP TRP B . n B 2 122 VAL 122 180 180 VAL VAL B . n B 2 123 TYR 123 181 181 TYR TYR B . n B 2 124 SER 124 182 182 SER SER B . n B 2 125 GLU 125 183 183 GLU GLU B . n B 2 126 ASP 126 184 184 ASP ASP B . n B 2 127 CYS 127 185 185 CYS CYS B . n B 2 128 SER 128 186 186 SER SER B . n B 2 129 SER 129 187 187 SER SER B . n B 2 130 THR 130 188 188 THR THR B . n B 2 131 PHE 131 189 189 PHE PHE B . n B 2 132 LYS 132 190 190 LYS LYS B . n B 2 133 GLY 133 191 191 GLY GLY B . n B 2 134 ILE 134 192 192 ILE ILE B . n B 2 135 CYS 135 193 193 CYS CYS B . n B 2 136 GLN 136 194 194 GLN GLN B . n B 2 137 ARG 137 195 195 ARG ARG B . n B 2 138 ASP 138 196 196 ASP ASP B . n B 2 139 ALA 139 197 ? ? ? B . n B 2 140 ILE 140 198 ? ? ? B . n B 2 141 LEU 141 199 ? ? ? B . n B 2 142 THR 142 200 ? ? ? B . n B 2 143 HIS 143 201 ? ? ? B . n B 2 144 ASN 144 202 ? ? ? B . n B 2 145 GLY 145 203 ? ? ? B . n B 2 146 THR 146 204 ? ? ? B . n B 2 147 SER 147 205 ? ? ? B . n B 2 148 GLY 148 206 ? ? ? B . n B 2 149 VAL 149 207 ? ? ? B . n B 2 150 ALA 150 208 ? ? ? B . n B 2 151 ALA 151 209 ? ? ? B . n B 2 152 ALA 152 210 ? ? ? B . n B 2 153 HIS 153 211 ? ? ? B . n B 2 154 HIS 154 212 ? ? ? B . n B 2 155 HIS 155 213 ? ? ? B . n B 2 156 HIS 156 214 ? ? ? B . n B 2 157 HIS 157 215 ? ? ? B . n B 2 158 HIS 158 216 ? ? ? B . n # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 37 A ASN 78 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 89 A ASN 130 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3030 ? 1 MORE 11 ? 1 'SSA (A^2)' 12360 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-07-17 2 'Structure model' 1 1 2013-07-24 3 'Structure model' 1 2 2017-10-11 4 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 4 'Structure model' 'Atomic model' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Derived calculations' 8 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' reflns_shell 2 4 'Structure model' atom_site 3 4 'Structure model' chem_comp 4 4 'Structure model' entity 5 4 'Structure model' pdbx_branch_scheme 6 4 'Structure model' pdbx_chem_comp_identifier 7 4 'Structure model' pdbx_entity_branch 8 4 'Structure model' pdbx_entity_branch_descriptor 9 4 'Structure model' pdbx_entity_branch_link 10 4 'Structure model' pdbx_entity_branch_list 11 4 'Structure model' pdbx_entity_nonpoly 12 4 'Structure model' pdbx_nonpoly_scheme 13 4 'Structure model' pdbx_struct_assembly_gen 14 4 'Structure model' struct_asym 15 4 'Structure model' struct_conn 16 4 'Structure model' struct_ref_seq_dif 17 4 'Structure model' struct_site 18 4 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_reflns_shell.percent_possible_all' 2 4 'Structure model' '_atom_site.auth_asym_id' 3 4 'Structure model' '_atom_site.auth_seq_id' 4 4 'Structure model' '_atom_site.label_asym_id' 5 4 'Structure model' '_atom_site.label_entity_id' 6 4 'Structure model' '_chem_comp.name' 7 4 'Structure model' '_chem_comp.type' 8 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 9 4 'Structure model' '_struct_conn.pdbx_dist_value' 10 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 11 4 'Structure model' '_struct_conn.pdbx_role' 12 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 13 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 14 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 15 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 16 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 17 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 18 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 19 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 20 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 21 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 22 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 23 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 24 4 'Structure model' '_struct_ref_seq_dif.details' # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 3.350 _diffrn_reflns.pdbx_d_res_low 50.000 _diffrn_reflns.pdbx_number_obs 5909 _diffrn_reflns.pdbx_Rmerge_I_obs 0.102 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 0.93 _diffrn_reflns.av_sigmaI_over_netI ? _diffrn_reflns.pdbx_redundancy 22.70 _diffrn_reflns.pdbx_percent_possible_obs 99.70 _diffrn_reflns.number 134121 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 7.21 50.00 100 ? 0.031 ? 1.013 20.60 98.80 1 5.73 7.21 162 ? 0.061 ? 0.907 21.50 100.00 1 5.00 5.73 191 ? 0.080 ? 0.886 22.10 100.00 1 4.55 5.00 232 ? 0.089 ? 0.902 22.70 100.00 1 4.22 4.55 248 ? 0.129 ? 0.958 22.90 100.00 1 3.97 4.22 272 ? 0.187 ? 0.919 23.30 99.80 1 3.77 3.97 296 ? 0.265 ? 0.915 23.40 99.80 1 3.61 3.77 310 ? 0.427 ? 0.928 23.60 99.70 1 3.47 3.61 336 ? 0.615 ? 0.923 23.50 99.70 1 3.35 3.47 350 ? 0.877 ? 0.916 23.80 99.80 # _pdbx_phasing_MR.entry_id 4IOP _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 3.400 _pdbx_phasing_MR.d_res_low_rotation 49.170 _pdbx_phasing_MR.d_res_high_translation 3.400 _pdbx_phasing_MR.d_res_low_translation 49.170 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 PHASER 1.3.2 'Fri May 5 14:40:40 2006' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns-online.org/ Fortran_77 ? 4 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 57 ? ? 81.20 174.80 2 1 SER A 59 ? ? -62.60 -168.67 3 1 ARG A 66 ? ? 58.18 -126.16 4 1 LEU A 88 ? ? -76.34 24.93 5 1 GLN A 89 ? ? -157.43 24.93 6 1 LYS A 90 ? ? 34.68 65.08 7 1 LEU A 93 ? ? -27.78 96.73 8 1 ALA A 94 ? ? -0.30 79.09 9 1 TYR A 108 ? ? -96.78 49.05 10 1 ALA A 109 ? ? -162.19 -33.36 11 1 THR A 111 ? ? -40.94 -14.05 12 1 GLN A 122 ? ? 37.46 90.77 13 1 ASP A 124 ? ? -42.80 -93.29 14 1 SER A 125 ? ? -172.84 141.60 15 1 TRP A 128 ? ? -59.38 -166.13 16 1 ASN A 130 ? ? -58.09 -127.92 17 1 THR A 132 ? ? 151.98 137.13 18 1 ASN A 135 ? ? -67.24 -108.29 19 1 ILE A 140 ? ? -146.62 59.36 20 1 ASN A 143 ? ? 80.66 61.97 21 1 PRO A 170 ? ? -39.35 124.53 22 1 PRO B 79 ? ? -43.24 -177.18 23 1 ASP B 81 ? ? 68.28 64.38 24 1 TRP B 82 ? ? -154.32 83.55 25 1 LEU B 83 ? ? -49.00 166.73 26 1 GLU B 86 ? ? 62.76 -172.09 27 1 PHE B 92 ? ? -92.13 39.17 28 1 SER B 93 ? ? 41.84 -156.83 29 1 THR B 94 ? ? -168.38 -21.60 30 1 GLN B 108 ? ? -67.53 7.62 31 1 LEU B 109 ? ? -147.66 46.04 32 1 GLN B 110 ? ? 25.81 63.71 33 1 ILE B 116 ? ? -58.81 91.27 34 1 LEU B 119 ? ? -19.35 -39.20 35 1 GLU B 123 ? ? -73.19 33.44 36 1 PHE B 124 ? ? -135.37 -49.36 37 1 GLN B 126 ? ? -49.03 -71.50 38 1 ASN B 127 ? ? -87.45 42.60 39 1 PRO B 131 ? ? -25.64 121.07 40 1 TRP B 136 ? ? -56.36 176.92 41 1 PHE B 143 ? ? 80.31 -51.91 42 1 GLN B 144 ? ? -77.64 -92.95 43 1 LEU B 147 ? ? -123.44 -169.66 44 1 ILE B 151 ? ? -55.51 -9.77 45 1 GLU B 153 ? ? 72.05 62.34 46 1 PRO B 158 ? ? -59.66 -7.21 47 1 PHE B 161 ? ? -166.94 -159.17 48 1 SER B 162 ? ? -167.46 106.44 49 1 ILE B 192 ? ? -154.21 87.63 50 1 ARG B 195 ? ? 162.71 175.24 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A VAL 56 ? CB ? A VAL 15 CB 2 1 Y 1 A VAL 56 ? CG1 ? A VAL 15 CG1 3 1 Y 1 A VAL 56 ? CG2 ? A VAL 15 CG2 4 1 Y 1 A ALA 57 ? CB ? A ALA 16 CB 5 1 Y 1 A GLU 92 ? CG ? A GLU 51 CG 6 1 Y 1 A GLU 92 ? CD ? A GLU 51 CD 7 1 Y 1 A GLU 92 ? OE1 ? A GLU 51 OE1 8 1 Y 1 A GLU 92 ? OE2 ? A GLU 51 OE2 9 1 Y 1 A GLU 100 ? CG ? A GLU 59 CG 10 1 Y 1 A GLU 100 ? CD ? A GLU 59 CD 11 1 Y 1 A GLU 100 ? OE1 ? A GLU 59 OE1 12 1 Y 1 A GLU 100 ? OE2 ? A GLU 59 OE2 13 1 Y 1 A LYS 121 ? CG ? A LYS 80 CG 14 1 Y 1 A LYS 121 ? CD ? A LYS 80 CD 15 1 Y 1 A LYS 121 ? CE ? A LYS 80 CE 16 1 Y 1 A LYS 121 ? NZ ? A LYS 80 NZ 17 1 Y 1 A LYS 127 ? CG ? A LYS 86 CG 18 1 Y 1 A LYS 127 ? CD ? A LYS 86 CD 19 1 Y 1 A LYS 127 ? CE ? A LYS 86 CE 20 1 Y 1 A LYS 127 ? NZ ? A LYS 86 NZ 21 1 Y 1 A TYR 172 ? CG ? A TYR 131 CG 22 1 Y 1 A TYR 172 ? CD1 ? A TYR 131 CD1 23 1 Y 1 A TYR 172 ? CD2 ? A TYR 131 CD2 24 1 Y 1 A TYR 172 ? CE1 ? A TYR 131 CE1 25 1 Y 1 A TYR 172 ? CE2 ? A TYR 131 CE2 26 1 Y 1 A TYR 172 ? CZ ? A TYR 131 CZ 27 1 Y 1 A TYR 172 ? OH ? A TYR 131 OH 28 1 Y 1 B TYR 76 ? CG ? B TYR 18 CG 29 1 Y 1 B TYR 76 ? CD1 ? B TYR 18 CD1 30 1 Y 1 B TYR 76 ? CD2 ? B TYR 18 CD2 31 1 Y 1 B TYR 76 ? CE1 ? B TYR 18 CE1 32 1 Y 1 B TYR 76 ? CE2 ? B TYR 18 CE2 33 1 Y 1 B TYR 76 ? CZ ? B TYR 18 CZ 34 1 Y 1 B TYR 76 ? OH ? B TYR 18 OH 35 1 Y 1 B LEU 77 ? CG ? B LEU 19 CG 36 1 Y 1 B LEU 77 ? CD1 ? B LEU 19 CD1 37 1 Y 1 B LEU 77 ? CD2 ? B LEU 19 CD2 38 1 Y 1 B ASN 80 ? CG ? B ASN 22 CG 39 1 Y 1 B ASN 80 ? OD1 ? B ASN 22 OD1 40 1 Y 1 B ASN 80 ? ND2 ? B ASN 22 ND2 41 1 Y 1 B LYS 100 ? CG ? B LYS 42 CG 42 1 Y 1 B LYS 100 ? CD ? B LYS 42 CD 43 1 Y 1 B LYS 100 ? CE ? B LYS 42 CE 44 1 Y 1 B LYS 100 ? NZ ? B LYS 42 NZ 45 1 Y 1 B GLN 117 ? CG ? B GLN 59 CG 46 1 Y 1 B GLN 117 ? CD ? B GLN 59 CD 47 1 Y 1 B GLN 117 ? OE1 ? B GLN 59 OE1 48 1 Y 1 B GLN 117 ? NE2 ? B GLN 59 NE2 49 1 Y 1 B GLU 123 ? CG ? B GLU 65 CG 50 1 Y 1 B GLU 123 ? CD ? B GLU 65 CD 51 1 Y 1 B GLU 123 ? OE1 ? B GLU 65 OE1 52 1 Y 1 B GLU 123 ? OE2 ? B GLU 65 OE2 53 1 Y 1 B PHE 155 ? CG ? B PHE 97 CG 54 1 Y 1 B PHE 155 ? CD1 ? B PHE 97 CD1 55 1 Y 1 B PHE 155 ? CD2 ? B PHE 97 CD2 56 1 Y 1 B PHE 155 ? CE1 ? B PHE 97 CE1 57 1 Y 1 B PHE 155 ? CE2 ? B PHE 97 CE2 58 1 Y 1 B PHE 155 ? CZ ? B PHE 97 CZ 59 1 Y 1 B GLU 159 ? CG ? B GLU 101 CG 60 1 Y 1 B GLU 159 ? CD ? B GLU 101 CD 61 1 Y 1 B GLU 159 ? OE1 ? B GLU 101 OE1 62 1 Y 1 B GLU 159 ? OE2 ? B GLU 101 OE2 63 1 Y 1 B VAL 163 ? CG1 ? B VAL 105 CG1 64 1 Y 1 B VAL 163 ? CG2 ? B VAL 105 CG2 65 1 Y 1 B ILE 164 ? CG1 ? B ILE 106 CG1 66 1 Y 1 B ILE 164 ? CG2 ? B ILE 106 CG2 67 1 Y 1 B ILE 164 ? CD1 ? B ILE 106 CD1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 42 ? A ASP 1 2 1 Y 1 A LEU 43 ? A LEU 2 3 1 Y 1 A GLY 44 ? A GLY 3 4 1 Y 1 A SER 45 ? A SER 4 5 1 Y 1 A ILE 46 ? A ILE 5 6 1 Y 1 A ALA 47 ? A ALA 6 7 1 Y 1 A THR 48 ? A THR 7 8 1 Y 1 A TRP 49 ? A TRP 8 9 1 Y 1 A SER 50 ? A SER 9 10 1 Y 1 A LYS 51 ? A LYS 10 11 1 Y 1 A HIS 52 ? A HIS 11 12 1 Y 1 A ALA 53 ? A ALA 12 13 1 Y 1 A LYS 54 ? A LYS 13 14 1 Y 1 A PRO 55 ? A PRO 14 15 1 Y 1 A PHE 173 ? A PHE 132 16 1 Y 1 A LEU 174 ? A LEU 133 17 1 Y 1 A ALA 175 ? A ALA 134 18 1 Y 1 A ALA 176 ? A ALA 135 19 1 Y 1 A ALA 177 ? A ALA 136 20 1 Y 1 A HIS 178 ? A HIS 137 21 1 Y 1 A HIS 179 ? A HIS 138 22 1 Y 1 A HIS 180 ? A HIS 139 23 1 Y 1 A HIS 181 ? A HIS 140 24 1 Y 1 A HIS 182 ? A HIS 141 25 1 Y 1 A HIS 183 ? A HIS 142 26 1 Y 1 B ASP 59 ? B ASP 1 27 1 Y 1 B LEU 60 ? B LEU 2 28 1 Y 1 B GLY 61 ? B GLY 3 29 1 Y 1 B SER 62 ? B SER 4 30 1 Y 1 B SER 63 ? B SER 5 31 1 Y 1 B GLN 64 ? B GLN 6 32 1 Y 1 B ASN 65 ? B ASN 7 33 1 Y 1 B VAL 66 ? B VAL 8 34 1 Y 1 B ASN 67 ? B ASN 9 35 1 Y 1 B VAL 68 ? B VAL 10 36 1 Y 1 B SER 69 ? B SER 11 37 1 Y 1 B SER 70 ? B SER 12 38 1 Y 1 B LEU 71 ? B LEU 13 39 1 Y 1 B SER 72 ? B SER 14 40 1 Y 1 B GLY 73 ? B GLY 15 41 1 Y 1 B HIS 74 ? B HIS 16 42 1 Y 1 B ASN 75 ? B ASN 17 43 1 Y 1 B ALA 197 ? B ALA 139 44 1 Y 1 B ILE 198 ? B ILE 140 45 1 Y 1 B LEU 199 ? B LEU 141 46 1 Y 1 B THR 200 ? B THR 142 47 1 Y 1 B HIS 201 ? B HIS 143 48 1 Y 1 B ASN 202 ? B ASN 144 49 1 Y 1 B GLY 203 ? B GLY 145 50 1 Y 1 B THR 204 ? B THR 146 51 1 Y 1 B SER 205 ? B SER 147 52 1 Y 1 B GLY 206 ? B GLY 148 53 1 Y 1 B VAL 207 ? B VAL 149 54 1 Y 1 B ALA 208 ? B ALA 150 55 1 Y 1 B ALA 209 ? B ALA 151 56 1 Y 1 B ALA 210 ? B ALA 152 57 1 Y 1 B HIS 211 ? B HIS 153 58 1 Y 1 B HIS 212 ? B HIS 154 59 1 Y 1 B HIS 213 ? B HIS 155 60 1 Y 1 B HIS 214 ? B HIS 156 61 1 Y 1 B HIS 215 ? B HIS 157 62 1 Y 1 B HIS 216 ? B HIS 158 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 3 NAG 1 C NAG 1 A NAG 800 n C 3 NAG 2 C NAG 2 A NAG 801 n C 3 MAN 3 C MAN 3 A MAN 802 n D 3 NAG 1 D NAG 1 A NAG 900 n D 3 NAG 2 D NAG 2 A NAG 901 n D 3 MAN 3 D MAN 3 A MAN 902 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 DManpa1-4DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 3 'WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1a_1-5]/1-1-2/a4-b1_b4-c1' WURCS PDB2Glycan 1.1.0 3 3 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][a-D-Manp]{}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 3 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 3 3 MAN C1 O1 2 NAG O4 HO4 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 NAG 1 n 3 NAG 2 n 3 MAN 3 n #