HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 15-JAN-13 4IRT TITLE CRYSTAL STRUCTURE OF A PUTATIVE NEURAMINIDASE (BACOVA_03493) FROM TITLE 2 BACTEROIDES OVATUS ATCC 8483 AT 1.74 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 19-431; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES OVATUS; SOURCE 3 ORGANISM_TAXID: 411476; SOURCE 4 ATCC: 8483; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS BNR REPEAT-LIKE DOMAIN, PF13088 FAMILY, PUTATIVE NEURAMINIDASE, KEYWDS 2 STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 3 PROTEIN STRUCTURE INITIATIVE, PSI-BIOLOGY, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 4 01-FEB-23 4IRT 1 REMARK SEQADV LINK REVDAT 3 15-NOV-17 4IRT 1 REMARK REVDAT 2 24-DEC-14 4IRT 1 TITLE REVDAT 1 13-MAR-13 4IRT 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN (BACOVA_03493) JRNL TITL 2 FROM BACTEROIDES OVATUS ATCC 8483 AT 1.74 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.74 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.74 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.53 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 44331 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2241 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.74 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.79 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2751 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.06 REMARK 3 BIN R VALUE (WORKING SET) : 0.2900 REMARK 3 BIN FREE R VALUE SET COUNT : 161 REMARK 3 BIN FREE R VALUE : 0.3440 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3253 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 27 REMARK 3 SOLVENT ATOMS : 410 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.26 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.65000 REMARK 3 B22 (A**2) : -0.52000 REMARK 3 B33 (A**2) : -0.13000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.114 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.110 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.069 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.282 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.940 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3506 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3218 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4775 ; 1.449 ; 1.935 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7407 ; 0.761 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 438 ; 7.512 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 188 ;32.709 ;23.457 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 557 ;12.057 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;15.844 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 495 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4042 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 894 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1642 ; 1.398 ; 1.748 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1641 ; 1.385 ; 1.744 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2058 ; 2.156 ; 3.242 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 21 A 427 REMARK 3 ORIGIN FOR THE GROUP (A): 23.7989 8.1893 23.0212 REMARK 3 T TENSOR REMARK 3 T11: 0.0293 T22: 0.0300 REMARK 3 T33: 0.0342 T12: -0.0063 REMARK 3 T13: 0.0018 T23: 0.0158 REMARK 3 L TENSOR REMARK 3 L11: 0.3785 L22: 0.4799 REMARK 3 L33: 0.5303 L12: 0.0046 REMARK 3 L13: 0.0910 L23: 0.1036 REMARK 3 S TENSOR REMARK 3 S11: -0.0169 S12: 0.0103 S13: 0.0150 REMARK 3 S21: -0.0045 S22: -0.0115 S23: -0.0170 REMARK 3 S31: -0.0005 S32: 0.0226 S33: 0.0285 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1.HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2.A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 3.ATOM RECORDS CONTAIN SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. 4.WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT. REMARK 3 5. CHLORIDE (CL), AND 1,2-ETHANEDIOL (EDO) FROM THE REMARK 3 CRYSTALLIZATION/CRYO CONDITIONS HAVE BEEN MODELED INTO THE REMARK 3 STRUCTURE. REMARK 4 REMARK 4 4IRT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1000077128. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918401,0.979493,0.979296 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : KOHZU: DOUBLE CRYSTAL SI(111) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44640 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.740 REMARK 200 RESOLUTION RANGE LOW (A) : 29.533 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.10900 REMARK 200 FOR THE DATA SET : 8.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.74 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.5 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.61300 REMARK 200 R SYM FOR SHELL (I) : 0.61300 REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.00M LITHIUM CHLORIDE, 14.00% REMARK 280 POLYETHYLENE GLYCOL 6000, 0.1M MES PH 6.5, NANODROP', VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 50.72850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.02550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 50.72850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 24.02550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 CYS A 19 REMARK 465 SER A 20 REMARK 465 GLY A 324 REMARK 465 GLY A 325 REMARK 465 THR A 326 REMARK 465 LYS A 327 REMARK 465 ASP A 408 REMARK 465 GLY A 409 REMARK 465 GLU A 410 REMARK 465 ARG A 411 REMARK 465 THR A 412 REMARK 465 ASP A 428 REMARK 465 THR A 429 REMARK 465 ASN A 430 REMARK 465 LYS A 431 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 26 -70.95 -108.77 REMARK 500 ASN A 91 47.97 -83.82 REMARK 500 HIS A 110 68.19 -151.69 REMARK 500 MSE A 133 -75.46 -98.90 REMARK 500 TYR A 143 62.12 60.79 REMARK 500 ASP A 225 156.69 69.43 REMARK 500 GLN A 270 76.65 69.83 REMARK 500 THR A 271 -123.06 -113.83 REMARK 500 THR A 285 -165.38 -161.76 REMARK 500 ASN A 291 43.15 -92.18 REMARK 500 ASP A 314 70.81 -119.16 REMARK 500 ASP A 380 -103.52 47.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 510 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 511 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 512 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-416961 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS CONSTRUCT (RESIDUES 19-431) WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 4IRT A 19 431 UNP A7M066 A7M066_BACOV 19 431 SEQADV 4IRT GLY A 0 UNP A7M066 EXPRESSION TAG SEQRES 1 A 414 GLY CYS SER GLN HIS LEU VAL GLU VAL GLY LYS GLY TYR SEQRES 2 A 414 SER CYS THR SER VAL ASN THR THR VAL PHE ARG ASN ASN SEQRES 3 A 414 SER LEU VAL THR HIS GLY ASP GLU GLN TYR ILE SER TYR SEQRES 4 A 414 TYR ASP ASN ASP GLY TYR LEU VAL LEU GLY LYS ARG LYS SEQRES 5 A 414 LEU ASP SER GLU GLN TRP THR LEU HIS ARG THR GLN TYR SEQRES 6 A 414 GLN GLY ASN VAL LYS ASP ALA HIS ASN ILE ILE SER MSE SEQRES 7 A 414 MSE ILE ASP GLY GLU GLY TYR ILE HIS VAL SER PHE ASP SEQRES 8 A 414 HIS HIS GLY HIS PRO LEU ASN TYR CYS ARG SER ILE ALA SEQRES 9 A 414 PRO GLY SER LEU GLU LEU GLY ASP LYS MSE PRO MSE THR SEQRES 10 A 414 GLY VAL ASP GLU GLY ASN VAL THR TYR PRO GLU PHE TYR SEQRES 11 A 414 PRO LEU SER GLY GLY ASP LEU LEU PHE VAL TYR ARG SER SEQRES 12 A 414 GLY SER SER GLY ARG GLY ASN LEU VAL MSE ASN ARG TYR SEQRES 13 A 414 SER LEU LYS GLU HIS LYS TRP THR ARG VAL GLN ASP ILE SEQRES 14 A 414 LEU ILE ASP GLY GLU ASN LYS ARG ASN ALA TYR TRP GLN SEQRES 15 A 414 LEU TYR VAL ASP GLU LYS GLY THR ILE HIS LEU SER TRP SEQRES 16 A 414 VAL TRP ARG GLU THR TRP HIS VAL GLU THR ASN HIS ASP SEQRES 17 A 414 ILE CYS TYR ALA ARG SER PHE ASP ASN GLY VAL THR TRP SEQRES 18 A 414 TYR LYS THR SER GLY GLU ARG TYR GLU LEU PRO ILE LYS SEQRES 19 A 414 LEU SER ASN ALA GLU TYR ALA CYS ARG LEU PRO GLN ASN SEQRES 20 A 414 CYS GLU LEU ILE ASN GLN THR SER MSE SER ALA ASP ALA SEQRES 21 A 414 GLY GLY ASN PRO TYR ILE ALA THR TYR TRP ARG GLU PRO SEQRES 22 A 414 ASN SER ASP VAL PRO GLN TYR ARG ILE VAL TRP ASN ASP SEQRES 23 A 414 GLY LYS MSE TRP HIS GLN ARG GLN ILE THR ASP ARG GLN SEQRES 24 A 414 THR PRO PHE THR LEU LYS GLY GLY GLY THR LYS MSE ILE SEQRES 25 A 414 PRO ILE ALA ARG PRO ARG ILE VAL VAL GLU GLY GLY GLU SEQRES 26 A 414 VAL PHE TYR ILE PHE ARG ASP GLU GLU ARG GLY SER ARG SEQRES 27 A 414 VAL SER MSE ALA HIS ALA THR ASP VAL GLY THR SER LYS SEQRES 28 A 414 TRP THR ILE THR ASP LEU THR ASP PHE SER VAL ASP ALA SEQRES 29 A 414 TRP GLU PRO SER HIS ASP THR GLU LEU TRP LYS LYS GLN SEQRES 30 A 414 ARG LYS LEU HIS LEU PHE VAL GLN HIS THR ARG GLN GLY SEQRES 31 A 414 ASP GLY GLU ARG THR ALA GLU ILE GLU PRO GLN MSE ILE SEQRES 32 A 414 TYR VAL LEU GLU THR ASN MSE ASP THR ASN LYS MODRES 4IRT MSE A 95 MET SELENOMETHIONINE MODRES 4IRT MSE A 96 MET SELENOMETHIONINE MODRES 4IRT MSE A 131 MET SELENOMETHIONINE MODRES 4IRT MSE A 133 MET SELENOMETHIONINE MODRES 4IRT MSE A 170 MET SELENOMETHIONINE MODRES 4IRT MSE A 273 MET SELENOMETHIONINE MODRES 4IRT MSE A 306 MET SELENOMETHIONINE MODRES 4IRT MSE A 328 MET SELENOMETHIONINE MODRES 4IRT MSE A 358 MET SELENOMETHIONINE MODRES 4IRT MSE A 419 MET SELENOMETHIONINE MODRES 4IRT MSE A 427 MET SELENOMETHIONINE HET MSE A 95 8 HET MSE A 96 8 HET MSE A 131 8 HET MSE A 133 8 HET MSE A 170 8 HET MSE A 273 8 HET MSE A 306 13 HET MSE A 328 8 HET MSE A 358 8 HET MSE A 419 8 HET MSE A 427 8 HET CL A 501 1 HET CL A 502 1 HET CL A 503 1 HET CL A 504 1 HET CL A 505 1 HET CL A 506 1 HET CL A 507 1 HET EDO A 508 4 HET EDO A 509 4 HET EDO A 510 4 HET EDO A 511 4 HET EDO A 512 4 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 11(C5 H11 N O2 SE) FORMUL 2 CL 7(CL 1-) FORMUL 9 EDO 5(C2 H6 O2) FORMUL 14 HOH *410(H2 O) HELIX 1 1 SER A 150 GLY A 152 5 3 HELIX 2 2 HIS A 219 GLU A 221 5 3 HELIX 3 3 ASP A 349 GLY A 353 5 5 HELIX 4 4 ASP A 387 ARG A 395 1 9 SHEET 1 A 3 HIS A 22 GLY A 29 0 SHEET 2 A 3 GLN A 418 GLU A 424 -1 O GLU A 424 N HIS A 22 SHEET 3 A 3 HIS A 398 GLN A 402 -1 N VAL A 401 O TYR A 421 SHEET 1 B 4 LEU A 45 HIS A 48 0 SHEET 2 B 4 GLU A 51 TYR A 57 -1 O TYR A 53 N VAL A 46 SHEET 3 B 4 TYR A 62 LYS A 69 -1 O VAL A 64 N TYR A 56 SHEET 4 B 4 THR A 76 GLN A 83 -1 O THR A 76 N LYS A 67 SHEET 1 C 3 ILE A 93 ILE A 97 0 SHEET 2 C 3 ILE A 103 PHE A 107 -1 O HIS A 104 N MSE A 96 SHEET 3 C 3 TYR A 116 ARG A 118 -1 O CYS A 117 N VAL A 105 SHEET 1 D 4 VAL A 141 PRO A 148 0 SHEET 2 D 4 LEU A 154 SER A 160 -1 O LEU A 155 N TYR A 147 SHEET 3 D 4 LEU A 168 SER A 174 -1 O TYR A 173 N LEU A 154 SHEET 4 D 4 LYS A 179 GLN A 184 -1 O VAL A 183 N MSE A 170 SHEET 1 E 4 ASN A 195 VAL A 202 0 SHEET 2 E 4 ILE A 208 ARG A 215 -1 O HIS A 209 N TYR A 201 SHEET 3 E 4 ASN A 223 SER A 231 -1 O CYS A 227 N TRP A 212 SHEET 4 E 4 GLU A 256 CYS A 259 -1 O CYS A 259 N ILE A 226 SHEET 1 F 4 SER A 272 ALA A 275 0 SHEET 2 F 4 PRO A 281 ARG A 288 -1 O TYR A 282 N SER A 274 SHEET 3 F 4 PRO A 295 ASN A 302 -1 O VAL A 300 N ILE A 283 SHEET 4 F 4 TRP A 307 GLN A 311 -1 O HIS A 308 N TRP A 301 SHEET 1 G 4 ARG A 335 GLU A 339 0 SHEET 2 G 4 GLU A 342 PHE A 347 -1 O ILE A 346 N ARG A 335 SHEET 3 G 4 SER A 357 ALA A 361 -1 O ALA A 359 N TYR A 345 SHEET 4 G 4 THR A 370 ASP A 373 -1 O THR A 372 N MSE A 358 LINK C SER A 94 N MSE A 95 1555 1555 1.33 LINK C MSE A 95 N MSE A 96 1555 1555 1.34 LINK C MSE A 96 N ILE A 97 1555 1555 1.33 LINK C LYS A 130 N MSE A 131 1555 1555 1.34 LINK C MSE A 131 N PRO A 132 1555 1555 1.34 LINK C PRO A 132 N MSE A 133 1555 1555 1.33 LINK C MSE A 133 N THR A 134 1555 1555 1.33 LINK C VAL A 169 N MSE A 170 1555 1555 1.33 LINK C MSE A 170 N ASN A 171 1555 1555 1.32 LINK C SER A 272 N MSE A 273 1555 1555 1.32 LINK C MSE A 273 N SER A 274 1555 1555 1.32 LINK C LYS A 305 N MSE A 306 1555 1555 1.33 LINK C MSE A 306 N TRP A 307 1555 1555 1.33 LINK C MSE A 328 N ILE A 329 1555 1555 1.32 LINK C SER A 357 N MSE A 358 1555 1555 1.34 LINK C MSE A 358 N ALA A 359 1555 1555 1.33 LINK C GLN A 418 N MSE A 419 1555 1555 1.32 LINK C MSE A 419 N ILE A 420 1555 1555 1.33 LINK C ASN A 426 N MSE A 427 1555 1555 1.33 CISPEP 1 ASN A 42 ASN A 43 0 5.83 CISPEP 2 LEU A 248 PRO A 249 0 -0.50 SITE 1 AC1 5 ARG A 159 GLY A 166 ASN A 195 ALA A 196 SITE 2 AC1 5 EDO A 510 SITE 1 AC2 4 LYS A 87 SER A 367 LYS A 368 HOH A 917 SITE 1 AC3 2 GLN A 21 LEU A 23 SITE 1 AC4 2 GLN A 83 HOH A 963 SITE 1 AC5 5 ASP A 276 ALA A 277 GLU A 339 GLY A 340 SITE 2 AC5 5 HOH A 702 SITE 1 AC6 5 TYR A 201 VAL A 202 LYS A 392 HOH A 712 SITE 2 AC6 5 HOH A 780 SITE 1 AC7 3 MSE A 306 TRP A 307 LYS A 322 SITE 1 AC8 4 ASN A 59 VAL A 86 LYS A 87 HOH A 987 SITE 1 AC9 6 ASP A 50 LYS A 69 ASP A 71 GLY A 128 SITE 2 AC9 6 ASP A 129 HOH A 853 SITE 1 BC1 8 GLY A 166 ASN A 167 LEU A 168 ILE A 188 SITE 2 BC1 8 TRP A 198 ASN A 291 CL A 501 HOH A 882 SITE 1 BC2 6 ASP A 108 HIS A 112 ASN A 115 ASP A 363 SITE 2 BC2 6 HOH A 825 HOH A 897 SITE 1 BC3 4 ARG A 230 PHE A 232 TYR A 239 LYS A 240 CRYST1 101.457 48.051 88.599 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009856 0.000000 0.000000 0.00000 SCALE2 0.000000 0.020811 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011287 0.00000