HEADER HYDROLASE INHIBITOR 17-JAN-13 4IT7 TITLE CRYSTAL STRUCTURE OF AL-CPI COMPND MOL_ID: 1; COMPND 2 MOLECULE: CPI; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: CYSTEINE PROTEASE INHIBITOR; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASCARIS LUMBRICOIDES; SOURCE 3 ORGANISM_COMMON: COMMON ROUNDWORM; SOURCE 4 ORGANISM_TAXID: 6252; SOURCE 5 GENE: CPI; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CPI, CYSTATIN, HYDROLASE INHIBITOR EXPDTA X-RAY DIFFRACTION AUTHOR G.Q.MEI,S.L.LIU,M.Z.SUN,J.LIU REVDAT 2 11-JUN-14 4IT7 1 JRNL REVDAT 1 29-JAN-14 4IT7 0 JRNL AUTH G.MEI,J.DONG,Z.LI,S.LIU,Y.LIU,M.SUN,G.LIU,Z.SU,J.LIU JRNL TITL STRUCTURAL BASIS FOR THE IMMUNOMODULATORY FUNCTION OF JRNL TITL 2 CYSTEINE PROTEASE INHIBITOR FROM HUMAN ROUNDWORM ASCARIS JRNL TITL 3 LUMBRICOIDES. JRNL REF PLOS ONE V. 9 96069 2014 JRNL REFN ESSN 1932-6203 JRNL PMID 24781326 JRNL DOI 10.1371/JOURNAL.PONE.0096069 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.01 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 19288 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 988 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1433 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.86 REMARK 3 BIN R VALUE (WORKING SET) : 0.3220 REMARK 3 BIN FREE R VALUE SET COUNT : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3220 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 126 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.20000 REMARK 3 B22 (A**2) : 2.68000 REMARK 3 B33 (A**2) : -1.47000 REMARK 3 B12 (A**2) : -0.14000 REMARK 3 B13 (A**2) : -0.01000 REMARK 3 B23 (A**2) : 0.01000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.323 REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3264 ; 0.015 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4428 ; 1.802 ; 1.949 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 424 ; 7.732 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 128 ;48.491 ;27.188 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 596 ;19.149 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;24.867 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 536 ; 0.122 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2364 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4IT7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-FEB-13. REMARK 100 THE RCSB ID CODE IS RCSB077178. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL; NULL REMARK 200 TEMPERATURE (KELVIN) : NULL; NULL REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; N REMARK 200 RADIATION SOURCE : SSRF; SEALED TUBE REMARK 200 BEAMLINE : BL17U; NULL REMARK 200 X-RAY GENERATOR MODEL : NULL; OXFORD DIFFRACTION ENHANCE REMARK 200 ULTRA REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792; 1.54056 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; NULL REMARK 200 DETECTOR MANUFACTURER : NULL; NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19288 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 44.580 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM ACETATE TRIHYDRATE, 0.1 M REMARK 280 SODIUM CACODYLATE TRIHYDRATE, 30% W/V POLYETHYLENE GLYCOL, PH REMARK 280 6.5, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 GLN A 1 REMARK 465 VAL A 2 REMARK 465 GLY A 3 REMARK 465 VAL A 4 REMARK 465 PRO A 5 REMARK 465 GLY B 0 REMARK 465 GLN B 1 REMARK 465 VAL B 2 REMARK 465 GLY B 3 REMARK 465 VAL B 4 REMARK 465 PRO B 5 REMARK 465 GLY C 0 REMARK 465 GLN C 1 REMARK 465 VAL C 2 REMARK 465 GLY C 3 REMARK 465 VAL C 4 REMARK 465 PRO C 5 REMARK 465 GLY D 0 REMARK 465 GLN D 1 REMARK 465 VAL D 2 REMARK 465 GLY D 3 REMARK 465 VAL D 4 REMARK 465 PRO D 5 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA D 75 O HOH D 207 2.13 REMARK 500 O ALA D 32 O HOH D 215 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TRP B 98 CE2 TRP B 98 CD2 0.081 REMARK 500 TRP C 98 CE2 TRP C 98 CD2 0.076 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY B 84 N - CA - C ANGL. DEV. = -16.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 51 40.26 -140.92 REMARK 500 GLU A 72 -158.90 -138.99 REMARK 500 THR A 73 88.66 -152.74 REMARK 500 ALA A 75 0.33 -69.81 REMARK 500 THR A 85 99.78 -61.72 REMARK 500 GLU A 108 141.76 -175.36 REMARK 500 VAL B 51 34.03 -152.04 REMARK 500 ASN B 71 32.56 -85.83 REMARK 500 GLU B 108 143.76 -173.94 REMARK 500 VAL C 51 40.08 -140.72 REMARK 500 ASN C 71 33.02 -85.02 REMARK 500 ASN C 83 -168.55 -116.09 REMARK 500 GLU C 108 141.94 -177.37 REMARK 500 ASN D 71 35.55 -80.25 REMARK 500 GLU D 72 -154.82 -151.97 REMARK 500 THR D 73 103.59 -163.72 REMARK 500 GLU D 108 144.16 -171.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN B 83 GLY B 84 145.95 REMARK 500 ASN C 83 GLY C 84 -148.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 ASN B 83 23.3 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL DBREF 4IT7 A 1 112 UNP E9N3T6 E9N3T6_9BILA 21 132 DBREF 4IT7 B 1 112 UNP E9N3T6 E9N3T6_9BILA 21 132 DBREF 4IT7 C 1 112 UNP E9N3T6 E9N3T6_9BILA 21 132 DBREF 4IT7 D 1 112 UNP E9N3T6 E9N3T6_9BILA 21 132 SEQADV 4IT7 GLY A 0 UNP E9N3T6 EXPRESSION TAG SEQADV 4IT7 GLY B 0 UNP E9N3T6 EXPRESSION TAG SEQADV 4IT7 GLY C 0 UNP E9N3T6 EXPRESSION TAG SEQADV 4IT7 GLY D 0 UNP E9N3T6 EXPRESSION TAG SEQRES 1 A 113 GLY GLN VAL GLY VAL PRO GLY GLY PHE SER THR LYS ASP SEQRES 2 A 113 VAL ASN ASP PRO LYS ILE GLN ALA LEU ALA GLY LYS ALA SEQRES 3 A 113 LEU GLN ARG ILE ASN ALA ALA SER ASN ASP LEU PHE GLN SEQRES 4 A 113 GLN THR ILE VAL LYS VAL ILE SER ALA LYS THR GLN VAL SEQRES 5 A 113 VAL ALA GLY THR ASN THR VAL LEU GLU LEU LEU ILE ALA SEQRES 6 A 113 PRO THR SER CYS ARG LYS ASN GLU THR SER ALA GLY ASN SEQRES 7 A 113 CYS GLU ALA VAL SER ASN GLY THR LYS GLN ILE CYS THR SEQRES 8 A 113 VAL ALA ILE TRP GLU LYS PRO TRP GLU ASN PHE GLU GLU SEQRES 9 A 113 ILE THR ILE LYS GLU CYS LYS SER ALA SEQRES 1 B 113 GLY GLN VAL GLY VAL PRO GLY GLY PHE SER THR LYS ASP SEQRES 2 B 113 VAL ASN ASP PRO LYS ILE GLN ALA LEU ALA GLY LYS ALA SEQRES 3 B 113 LEU GLN ARG ILE ASN ALA ALA SER ASN ASP LEU PHE GLN SEQRES 4 B 113 GLN THR ILE VAL LYS VAL ILE SER ALA LYS THR GLN VAL SEQRES 5 B 113 VAL ALA GLY THR ASN THR VAL LEU GLU LEU LEU ILE ALA SEQRES 6 B 113 PRO THR SER CYS ARG LYS ASN GLU THR SER ALA GLY ASN SEQRES 7 B 113 CYS GLU ALA VAL SER ASN GLY THR LYS GLN ILE CYS THR SEQRES 8 B 113 VAL ALA ILE TRP GLU LYS PRO TRP GLU ASN PHE GLU GLU SEQRES 9 B 113 ILE THR ILE LYS GLU CYS LYS SER ALA SEQRES 1 C 113 GLY GLN VAL GLY VAL PRO GLY GLY PHE SER THR LYS ASP SEQRES 2 C 113 VAL ASN ASP PRO LYS ILE GLN ALA LEU ALA GLY LYS ALA SEQRES 3 C 113 LEU GLN ARG ILE ASN ALA ALA SER ASN ASP LEU PHE GLN SEQRES 4 C 113 GLN THR ILE VAL LYS VAL ILE SER ALA LYS THR GLN VAL SEQRES 5 C 113 VAL ALA GLY THR ASN THR VAL LEU GLU LEU LEU ILE ALA SEQRES 6 C 113 PRO THR SER CYS ARG LYS ASN GLU THR SER ALA GLY ASN SEQRES 7 C 113 CYS GLU ALA VAL SER ASN GLY THR LYS GLN ILE CYS THR SEQRES 8 C 113 VAL ALA ILE TRP GLU LYS PRO TRP GLU ASN PHE GLU GLU SEQRES 9 C 113 ILE THR ILE LYS GLU CYS LYS SER ALA SEQRES 1 D 113 GLY GLN VAL GLY VAL PRO GLY GLY PHE SER THR LYS ASP SEQRES 2 D 113 VAL ASN ASP PRO LYS ILE GLN ALA LEU ALA GLY LYS ALA SEQRES 3 D 113 LEU GLN ARG ILE ASN ALA ALA SER ASN ASP LEU PHE GLN SEQRES 4 D 113 GLN THR ILE VAL LYS VAL ILE SER ALA LYS THR GLN VAL SEQRES 5 D 113 VAL ALA GLY THR ASN THR VAL LEU GLU LEU LEU ILE ALA SEQRES 6 D 113 PRO THR SER CYS ARG LYS ASN GLU THR SER ALA GLY ASN SEQRES 7 D 113 CYS GLU ALA VAL SER ASN GLY THR LYS GLN ILE CYS THR SEQRES 8 D 113 VAL ALA ILE TRP GLU LYS PRO TRP GLU ASN PHE GLU GLU SEQRES 9 D 113 ILE THR ILE LYS GLU CYS LYS SER ALA FORMUL 5 HOH *126(H2 O) HELIX 1 1 ASP A 15 SER A 33 1 19 HELIX 2 2 ASP B 15 SER B 33 1 19 HELIX 3 3 ASP C 15 SER C 33 1 19 HELIX 4 4 ASP D 15 SER D 33 1 19 SHEET 1 A 5 SER A 9 THR A 10 0 SHEET 2 A 5 PHE A 37 GLN A 50 -1 O THR A 49 N SER A 9 SHEET 3 A 5 THR A 55 ARG A 69 -1 O LEU A 62 N VAL A 42 SHEET 4 A 5 GLN A 87 LYS A 96 -1 O GLN A 87 N ILE A 63 SHEET 5 A 5 PHE A 101 SER A 111 -1 O THR A 105 N ALA A 92 SHEET 1 B 5 SER B 9 THR B 10 0 SHEET 2 B 5 PHE B 37 GLN B 50 -1 O THR B 49 N SER B 9 SHEET 3 B 5 THR B 55 ARG B 69 -1 O LEU B 62 N LYS B 43 SHEET 4 B 5 GLN B 87 LYS B 96 -1 O VAL B 91 N LEU B 59 SHEET 5 B 5 PHE B 101 SER B 111 -1 O THR B 105 N ALA B 92 SHEET 1 C 5 SER C 9 THR C 10 0 SHEET 2 C 5 PHE C 37 GLN C 50 -1 O THR C 49 N SER C 9 SHEET 3 C 5 THR C 55 ARG C 69 -1 O LEU C 62 N VAL C 42 SHEET 4 C 5 GLN C 87 LYS C 96 -1 O VAL C 91 N LEU C 59 SHEET 5 C 5 PHE C 101 SER C 111 -1 O THR C 105 N ALA C 92 SHEET 1 D 5 SER D 9 THR D 10 0 SHEET 2 D 5 PHE D 37 GLN D 50 -1 O THR D 49 N SER D 9 SHEET 3 D 5 THR D 55 ARG D 69 -1 O LEU D 62 N VAL D 42 SHEET 4 D 5 GLN D 87 LYS D 96 -1 O VAL D 91 N LEU D 59 SHEET 5 D 5 PHE D 101 SER D 111 -1 O THR D 105 N ALA D 92 SSBOND 1 CYS A 68 CYS A 78 1555 1555 2.28 SSBOND 2 CYS A 89 CYS A 109 1555 1555 2.04 SSBOND 3 CYS B 68 CYS B 78 1555 1555 1.89 SSBOND 4 CYS B 89 CYS B 109 1555 1555 2.05 SSBOND 5 CYS C 68 CYS C 78 1555 1555 2.06 SSBOND 6 CYS C 89 CYS C 109 1555 1555 2.05 SSBOND 7 CYS D 68 CYS D 78 1555 1555 1.87 SSBOND 8 CYS D 89 CYS D 109 1555 1555 2.05 CISPEP 1 ASN A 83 GLY A 84 0 -5.49 CISPEP 2 ASN D 83 GLY D 84 0 -8.23 CRYST1 43.510 44.499 44.582 90.00 89.99 90.00 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022983 0.000000 -0.000002 0.00000 SCALE2 0.000000 0.022472 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022430 0.00000