data_4IVE # _entry.id 4IVE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4IVE pdb_00004ive 10.2210/pdb4ive/pdb RCSB RCSB077257 ? ? WWPDB D_1000077257 ? ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id JCSG-424003 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 4IVE _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-01-22 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Joint Center for Structural Genomics (JCSG)' 1 'Partnership for T-Cell Biology (TCELL)' 2 # _citation.id primary _citation.title 'Crystal structure of a polyadenylate-binding protein 3 (PABPC3) from Homo sapiens at 2.30 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Joint Center for Structural Genomics (JCSG)' 1 ? primary 'Partnership for T-Cell Biology (TCELL)' 2 ? # _cell.entry_id 4IVE _cell.length_a 67.395 _cell.length_b 67.395 _cell.length_c 101.380 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 16 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4IVE _symmetry.Int_Tables_number 78 _symmetry.space_group_name_H-M 'P 43' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Polyadenylate-binding protein 3' 10708.643 4 ? ? 'PABC domain residues 535-631' ? 2 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 3 water nat water 18.015 133 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PABP-3, Poly(A)-binding protein 3, Testis-specific poly(A)-binding protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GQGQETLTASRLASAPPQKQKQ(MSE)LGERLFPLIQA(MSE)HPTLAGKITG(MSE)LLEIDNSELLY(MSE)LESPES LRSKVDEAVAVLQAHQAKEATQKAVNSATGVPTV ; _entity_poly.pdbx_seq_one_letter_code_can ;GQGQETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESLRSKVDEAVAVLQAHQ AKEATQKAVNSATGVPTV ; _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier JCSG-424003 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLN n 1 3 GLY n 1 4 GLN n 1 5 GLU n 1 6 THR n 1 7 LEU n 1 8 THR n 1 9 ALA n 1 10 SER n 1 11 ARG n 1 12 LEU n 1 13 ALA n 1 14 SER n 1 15 ALA n 1 16 PRO n 1 17 PRO n 1 18 GLN n 1 19 LYS n 1 20 GLN n 1 21 LYS n 1 22 GLN n 1 23 MSE n 1 24 LEU n 1 25 GLY n 1 26 GLU n 1 27 ARG n 1 28 LEU n 1 29 PHE n 1 30 PRO n 1 31 LEU n 1 32 ILE n 1 33 GLN n 1 34 ALA n 1 35 MSE n 1 36 HIS n 1 37 PRO n 1 38 THR n 1 39 LEU n 1 40 ALA n 1 41 GLY n 1 42 LYS n 1 43 ILE n 1 44 THR n 1 45 GLY n 1 46 MSE n 1 47 LEU n 1 48 LEU n 1 49 GLU n 1 50 ILE n 1 51 ASP n 1 52 ASN n 1 53 SER n 1 54 GLU n 1 55 LEU n 1 56 LEU n 1 57 TYR n 1 58 MSE n 1 59 LEU n 1 60 GLU n 1 61 SER n 1 62 PRO n 1 63 GLU n 1 64 SER n 1 65 LEU n 1 66 ARG n 1 67 SER n 1 68 LYS n 1 69 VAL n 1 70 ASP n 1 71 GLU n 1 72 ALA n 1 73 VAL n 1 74 ALA n 1 75 VAL n 1 76 LEU n 1 77 GLN n 1 78 ALA n 1 79 HIS n 1 80 GLN n 1 81 ALA n 1 82 LYS n 1 83 GLU n 1 84 ALA n 1 85 THR n 1 86 GLN n 1 87 LYS n 1 88 ALA n 1 89 VAL n 1 90 ASN n 1 91 SER n 1 92 ALA n 1 93 THR n 1 94 GLY n 1 95 VAL n 1 96 PRO n 1 97 THR n 1 98 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BC027617, PABP3, PABPC3, PABPL3' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain PB1 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PABP3_HUMAN _struct_ref.pdbx_db_accession Q9H361 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QGQETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESLRSKVDEAVAVLQAHQA KEATQKAVNSATGVPTV ; _struct_ref.pdbx_align_begin 535 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4IVE A 2 ? 98 ? Q9H361 535 ? 631 ? 535 631 2 1 4IVE B 2 ? 98 ? Q9H361 535 ? 631 ? 535 631 3 1 4IVE C 2 ? 98 ? Q9H361 535 ? 631 ? 535 631 4 1 4IVE D 2 ? 98 ? Q9H361 535 ? 631 ? 535 631 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4IVE GLY A 1 ? UNP Q9H361 ? ? 'expression tag' 0 1 2 4IVE GLY B 1 ? UNP Q9H361 ? ? 'expression tag' 0 2 3 4IVE GLY C 1 ? UNP Q9H361 ? ? 'expression tag' 0 3 4 4IVE GLY D 1 ? UNP Q9H361 ? ? 'expression tag' 0 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 4IVE # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.69 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 54.23 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 5.62 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '26.00% polyethylene glycol 6000, 0.1M MES pH 5.62, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.details 'KOHZU: Double Crystal Si(111)' _diffrn_detector.pdbx_collection_date 2012-10-17 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double Crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.979493 1.0 2 0.918401 1.0 3 0.979284 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline 8.2.2 _diffrn_source.type 'ALS BEAMLINE 8.2.2' _diffrn_source.pdbx_wavelength_list 0.979493,0.918401,0.979284 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ALS # _reflns.entry_id 4IVE _reflns.d_resolution_high 2.30 _reflns.d_resolution_low 43.128 _reflns.number_obs 20106 _reflns.pdbx_Rmerge_I_obs 0.097 _reflns.pdbx_netI_over_sigmaI 12.030 _reflns.percent_possible_obs 99.500 _reflns.B_iso_Wilson_estimate 47.537 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.300 2.380 12727 ? 1919 0.756 2.4 ? ? ? ? ? 97.800 1 1 2.380 2.480 16104 ? 2117 0.575 3.4 ? ? ? ? ? 100.000 2 1 2.480 2.590 14903 ? 1960 0.421 4.5 ? ? ? ? ? 100.000 3 1 2.590 2.730 15557 ? 2043 0.304 6.1 ? ? ? ? ? 100.000 4 1 2.730 2.900 15261 ? 2001 0.213 8.3 ? ? ? ? ? 100.000 5 1 2.900 3.120 14880 ? 1962 0.143 11.9 ? ? ? ? ? 100.000 6 1 3.120 3.430 14875 ? 1996 0.107 15.5 ? ? ? ? ? 100.000 7 1 3.430 3.930 12657 ? 2004 0.090 19.0 ? ? ? ? ? 98.000 8 1 3.930 4.930 13918 ? 1987 0.063 23.6 ? ? ? ? ? 99.800 9 1 4.930 43.128 15126 ? 2103 0.053 25.0 ? ? ? ? ? 99.700 10 1 # _refine.entry_id 4IVE _refine.ls_d_res_high 2.3000 _refine.ls_d_res_low 43.128 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.5800 _refine.ls_number_reflns_obs 20056 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 2. CHLORIDE IONS MODELED ARE PRESENT IN CRYSTALLIZATION BUFFER. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. THE MAD PHASES WERE USED AS RESTRAINTS DURING REFINEMENT. 5. NCS RESTRAINTS WERE APPLIED USING BUSTER'S LSSR RESTRAINT REPRESENTATION (-AUTONCS). ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2011 _refine.ls_R_factor_R_work 0.2005 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2121 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.0700 _refine.ls_number_reflns_R_free 1016 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 56.6623 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -5.0464 _refine.aniso_B[2][2] -5.0464 _refine.aniso_B[3][3] 10.0927 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9279 _refine.correlation_coeff_Fo_to_Fc_free 0.9277 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.solvent_model_details ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 165.610 _refine.B_iso_min 19.820 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.370 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4IVE _refine_analyze.Luzzati_coordinate_error_obs 0.357 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2310 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 133 _refine_hist.number_atoms_total 2445 _refine_hist.d_res_high 2.3000 _refine_hist.d_res_low 43.128 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id t_dihedral_angle_d 1208 ? ? 2.000 SINUSOIDAL 'X-RAY DIFFRACTION' t_trig_c_planes 63 ? ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_gen_planes 354 ? ? 5.000 HARMONIC 'X-RAY DIFFRACTION' t_it 2422 ? ? 20.000 HARMONIC 'X-RAY DIFFRACTION' t_nbd ? ? ? ? ? 'X-RAY DIFFRACTION' t_improper_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_pseud_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_chiral_improper_torsion 334 ? ? 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_sum_occupancies ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_distance ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_ideal_dist_contact 2964 ? ? 4.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_bond_d 2422 0.010 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_angle_deg 3292 1.050 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_omega_torsion ? 2.180 ? ? ? 'X-RAY DIFFRACTION' t_other_torsion ? 2.670 ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.3000 _refine_ls_shell.d_res_low 2.4200 _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.percent_reflns_obs 99.5800 _refine_ls_shell.number_reflns_R_work 2747 _refine_ls_shell.R_factor_all 0.2015 _refine_ls_shell.R_factor_R_work 0.1995 _refine_ls_shell.R_factor_R_free 0.2442 _refine_ls_shell.percent_reflns_R_free 4.5800 _refine_ls_shell.number_reflns_R_free 132 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2879 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4IVE _struct.title 'Crystal structure of a polyadenylate-binding protein 3 (PABPC3) from Homo sapiens at 2.30 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;PABP unique domain, PF00658 family, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, RNA-BINDING PROTEIN, RNA BINDING PROTEIN, Partnership for T-Cell Biology, TCELL ; _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.entry_id 4IVE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 8 ? SER A 14 ? THR A 541 SER A 547 1 ? 7 HELX_P HELX_P2 2 PRO A 16 ? HIS A 36 ? PRO A 549 HIS A 569 1 ? 21 HELX_P HELX_P3 3 LEU A 39 ? LEU A 48 ? LEU A 572 LEU A 581 1 ? 10 HELX_P HELX_P4 4 ASP A 51 ? GLU A 60 ? ASP A 584 GLU A 593 1 ? 10 HELX_P HELX_P5 5 SER A 61 ? GLN A 77 ? SER A 594 GLN A 610 1 ? 17 HELX_P HELX_P6 6 THR B 8 ? ALA B 15 ? THR B 541 ALA B 548 1 ? 8 HELX_P HELX_P7 7 PRO B 16 ? GLN B 18 ? PRO B 549 GLN B 551 5 ? 3 HELX_P HELX_P8 8 LYS B 19 ? HIS B 36 ? LYS B 552 HIS B 569 1 ? 18 HELX_P HELX_P9 9 LEU B 39 ? LEU B 48 ? LEU B 572 LEU B 581 1 ? 10 HELX_P HELX_P10 10 ASP B 51 ? SER B 61 ? ASP B 584 SER B 594 1 ? 11 HELX_P HELX_P11 11 SER B 61 ? GLN B 77 ? SER B 594 GLN B 610 1 ? 17 HELX_P HELX_P12 12 THR C 8 ? SER C 14 ? THR C 541 SER C 547 1 ? 7 HELX_P HELX_P13 13 PRO C 16 ? HIS C 36 ? PRO C 549 HIS C 569 1 ? 21 HELX_P HELX_P14 14 LEU C 39 ? LEU C 48 ? LEU C 572 LEU C 581 1 ? 10 HELX_P HELX_P15 15 ASP C 51 ? LEU C 59 ? ASP C 584 LEU C 592 1 ? 9 HELX_P HELX_P16 16 SER C 61 ? GLN C 77 ? SER C 594 GLN C 610 1 ? 17 HELX_P HELX_P17 17 THR D 8 ? ALA D 15 ? THR D 541 ALA D 548 1 ? 8 HELX_P HELX_P18 18 PRO D 16 ? GLN D 18 ? PRO D 549 GLN D 551 5 ? 3 HELX_P HELX_P19 19 LYS D 19 ? ALA D 34 ? LYS D 552 ALA D 567 1 ? 16 HELX_P HELX_P20 20 LEU D 39 ? LEU D 48 ? LEU D 572 LEU D 581 1 ? 10 HELX_P HELX_P21 21 ASP D 51 ? SER D 61 ? ASP D 584 SER D 594 1 ? 11 HELX_P HELX_P22 22 SER D 61 ? GLN D 77 ? SER D 594 GLN D 610 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLN 22 C ? ? ? 1_555 A MSE 23 N ? ? A GLN 555 A MSE 556 1_555 ? ? ? ? ? ? ? 1.351 ? ? covale2 covale both ? A MSE 23 C ? ? ? 1_555 A LEU 24 N ? ? A MSE 556 A LEU 557 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale3 covale both ? A ALA 34 C ? ? ? 1_555 A MSE 35 N ? ? A ALA 567 A MSE 568 1_555 ? ? ? ? ? ? ? 1.364 ? ? covale4 covale both ? A MSE 35 C ? ? ? 1_555 A HIS 36 N ? ? A MSE 568 A HIS 569 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale5 covale both ? A GLY 45 C ? ? ? 1_555 A MSE 46 N ? ? A GLY 578 A MSE 579 1_555 ? ? ? ? ? ? ? 1.353 ? ? covale6 covale both ? A MSE 46 C ? ? ? 1_555 A LEU 47 N ? ? A MSE 579 A LEU 580 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale7 covale both ? A TYR 57 C ? ? ? 1_555 A MSE 58 N ? ? A TYR 590 A MSE 591 1_555 ? ? ? ? ? ? ? 1.350 ? ? covale8 covale both ? A MSE 58 C ? ? ? 1_555 A LEU 59 N ? ? A MSE 591 A LEU 592 1_555 ? ? ? ? ? ? ? 1.354 ? ? covale9 covale both ? B GLN 22 C ? ? ? 1_555 B MSE 23 N ? ? B GLN 555 B MSE 556 1_555 ? ? ? ? ? ? ? 1.348 ? ? covale10 covale both ? B MSE 23 C ? ? ? 1_555 B LEU 24 N ? ? B MSE 556 B LEU 557 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale11 covale both ? B ALA 34 C ? ? ? 1_555 B MSE 35 N ? ? B ALA 567 B MSE 568 1_555 ? ? ? ? ? ? ? 1.351 ? ? covale12 covale both ? B MSE 35 C ? ? ? 1_555 B HIS 36 N ? ? B MSE 568 B HIS 569 1_555 ? ? ? ? ? ? ? 1.353 ? ? covale13 covale both ? B GLY 45 C ? ? ? 1_555 B MSE 46 N ? ? B GLY 578 B MSE 579 1_555 ? ? ? ? ? ? ? 1.355 ? ? covale14 covale both ? B MSE 46 C ? ? ? 1_555 B LEU 47 N ? ? B MSE 579 B LEU 580 1_555 ? ? ? ? ? ? ? 1.355 ? ? covale15 covale both ? B TYR 57 C ? ? ? 1_555 B MSE 58 N ? ? B TYR 590 B MSE 591 1_555 ? ? ? ? ? ? ? 1.345 ? ? covale16 covale both ? B MSE 58 C ? ? ? 1_555 B LEU 59 N ? ? B MSE 591 B LEU 592 1_555 ? ? ? ? ? ? ? 1.347 ? ? covale17 covale both ? C GLN 22 C ? ? ? 1_555 C MSE 23 N ? ? C GLN 555 C MSE 556 1_555 ? ? ? ? ? ? ? 1.351 ? ? covale18 covale both ? C MSE 23 C ? ? ? 1_555 C LEU 24 N ? ? C MSE 556 C LEU 557 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale19 covale both ? C ALA 34 C ? ? ? 1_555 C MSE 35 N ? ? C ALA 567 C MSE 568 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale20 covale both ? C MSE 35 C ? ? ? 1_555 C HIS 36 N ? ? C MSE 568 C HIS 569 1_555 ? ? ? ? ? ? ? 1.347 ? ? covale21 covale both ? C GLY 45 C ? ? ? 1_555 C MSE 46 N ? ? C GLY 578 C MSE 579 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale22 covale both ? C MSE 46 C ? ? ? 1_555 C LEU 47 N ? ? C MSE 579 C LEU 580 1_555 ? ? ? ? ? ? ? 1.362 ? ? covale23 covale both ? C TYR 57 C ? ? ? 1_555 C MSE 58 N ? ? C TYR 590 C MSE 591 1_555 ? ? ? ? ? ? ? 1.351 ? ? covale24 covale both ? C MSE 58 C ? ? ? 1_555 C LEU 59 N ? ? C MSE 591 C LEU 592 1_555 ? ? ? ? ? ? ? 1.343 ? ? covale25 covale both ? D GLN 22 C ? ? ? 1_555 D MSE 23 N ? ? D GLN 555 D MSE 556 1_555 ? ? ? ? ? ? ? 1.348 ? ? covale26 covale both ? D MSE 23 C ? ? ? 1_555 D LEU 24 N ? ? D MSE 556 D LEU 557 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale27 covale both ? D ALA 34 C ? ? ? 1_555 D MSE 35 N ? ? D ALA 567 D MSE 568 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale28 covale both ? D MSE 35 C ? ? ? 1_555 D HIS 36 N ? ? D MSE 568 D HIS 569 1_555 ? ? ? ? ? ? ? 1.351 ? ? covale29 covale both ? D GLY 45 C ? ? ? 1_555 D MSE 46 N ? ? D GLY 578 D MSE 579 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale30 covale both ? D MSE 46 C ? ? ? 1_555 D LEU 47 N ? ? D MSE 579 D LEU 580 1_555 ? ? ? ? ? ? ? 1.358 ? ? covale31 covale both ? D TYR 57 C ? ? ? 1_555 D MSE 58 N ? ? D TYR 590 D MSE 591 1_555 ? ? ? ? ? ? ? 1.352 ? ? covale32 covale both ? D MSE 58 C ? ? ? 1_555 D LEU 59 N ? ? D MSE 591 D LEU 592 1_555 ? ? ? ? ? ? ? 1.352 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CL 701 ? 2 'BINDING SITE FOR RESIDUE CL A 701' AC2 Software C CL 701 ? 3 'BINDING SITE FOR RESIDUE CL C 701' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 HIS A 36 ? HIS A 569 . ? 1_555 ? 2 AC1 2 THR A 38 ? THR A 571 . ? 1_555 ? 3 AC2 3 HIS C 36 ? HIS C 569 . ? 1_555 ? 4 AC2 3 PRO C 37 ? PRO C 570 . ? 1_555 ? 5 AC2 3 THR C 38 ? THR C 571 . ? 1_555 ? # _atom_sites.entry_id 4IVE _atom_sites.fract_transf_matrix[1][1] 0.014838 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014838 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009864 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 GLN 2 535 ? ? ? A . n A 1 3 GLY 3 536 ? ? ? A . n A 1 4 GLN 4 537 537 GLN GLN A . n A 1 5 GLU 5 538 538 GLU GLU A . n A 1 6 THR 6 539 539 THR THR A . n A 1 7 LEU 7 540 540 LEU LEU A . n A 1 8 THR 8 541 541 THR THR A . n A 1 9 ALA 9 542 542 ALA ALA A . n A 1 10 SER 10 543 543 SER SER A . n A 1 11 ARG 11 544 544 ARG ARG A . n A 1 12 LEU 12 545 545 LEU LEU A . n A 1 13 ALA 13 546 546 ALA ALA A . n A 1 14 SER 14 547 547 SER SER A . n A 1 15 ALA 15 548 548 ALA ALA A . n A 1 16 PRO 16 549 549 PRO PRO A . n A 1 17 PRO 17 550 550 PRO PRO A . n A 1 18 GLN 18 551 551 GLN GLN A . n A 1 19 LYS 19 552 552 LYS LYS A . n A 1 20 GLN 20 553 553 GLN GLN A . n A 1 21 LYS 21 554 554 LYS LYS A . n A 1 22 GLN 22 555 555 GLN GLN A . n A 1 23 MSE 23 556 556 MSE MSE A . n A 1 24 LEU 24 557 557 LEU LEU A . n A 1 25 GLY 25 558 558 GLY GLY A . n A 1 26 GLU 26 559 559 GLU GLU A . n A 1 27 ARG 27 560 560 ARG ARG A . n A 1 28 LEU 28 561 561 LEU LEU A . n A 1 29 PHE 29 562 562 PHE PHE A . n A 1 30 PRO 30 563 563 PRO PRO A . n A 1 31 LEU 31 564 564 LEU LEU A . n A 1 32 ILE 32 565 565 ILE ILE A . n A 1 33 GLN 33 566 566 GLN GLN A . n A 1 34 ALA 34 567 567 ALA ALA A . n A 1 35 MSE 35 568 568 MSE MSE A . n A 1 36 HIS 36 569 569 HIS HIS A . n A 1 37 PRO 37 570 570 PRO PRO A . n A 1 38 THR 38 571 571 THR THR A . n A 1 39 LEU 39 572 572 LEU LEU A . n A 1 40 ALA 40 573 573 ALA ALA A . n A 1 41 GLY 41 574 574 GLY GLY A . n A 1 42 LYS 42 575 575 LYS LYS A . n A 1 43 ILE 43 576 576 ILE ILE A . n A 1 44 THR 44 577 577 THR THR A . n A 1 45 GLY 45 578 578 GLY GLY A . n A 1 46 MSE 46 579 579 MSE MSE A . n A 1 47 LEU 47 580 580 LEU LEU A . n A 1 48 LEU 48 581 581 LEU LEU A . n A 1 49 GLU 49 582 582 GLU GLU A . n A 1 50 ILE 50 583 583 ILE ILE A . n A 1 51 ASP 51 584 584 ASP ASP A . n A 1 52 ASN 52 585 585 ASN ASN A . n A 1 53 SER 53 586 586 SER SER A . n A 1 54 GLU 54 587 587 GLU GLU A . n A 1 55 LEU 55 588 588 LEU LEU A . n A 1 56 LEU 56 589 589 LEU LEU A . n A 1 57 TYR 57 590 590 TYR TYR A . n A 1 58 MSE 58 591 591 MSE MSE A . n A 1 59 LEU 59 592 592 LEU LEU A . n A 1 60 GLU 60 593 593 GLU GLU A . n A 1 61 SER 61 594 594 SER SER A . n A 1 62 PRO 62 595 595 PRO PRO A . n A 1 63 GLU 63 596 596 GLU GLU A . n A 1 64 SER 64 597 597 SER SER A . n A 1 65 LEU 65 598 598 LEU LEU A . n A 1 66 ARG 66 599 599 ARG ARG A . n A 1 67 SER 67 600 600 SER SER A . n A 1 68 LYS 68 601 601 LYS LYS A . n A 1 69 VAL 69 602 602 VAL VAL A . n A 1 70 ASP 70 603 603 ASP ASP A . n A 1 71 GLU 71 604 604 GLU GLU A . n A 1 72 ALA 72 605 605 ALA ALA A . n A 1 73 VAL 73 606 606 VAL VAL A . n A 1 74 ALA 74 607 607 ALA ALA A . n A 1 75 VAL 75 608 608 VAL VAL A . n A 1 76 LEU 76 609 609 LEU LEU A . n A 1 77 GLN 77 610 610 GLN GLN A . n A 1 78 ALA 78 611 611 ALA ALA A . n A 1 79 HIS 79 612 612 HIS HIS A . n A 1 80 GLN 80 613 ? ? ? A . n A 1 81 ALA 81 614 ? ? ? A . n A 1 82 LYS 82 615 ? ? ? A . n A 1 83 GLU 83 616 ? ? ? A . n A 1 84 ALA 84 617 ? ? ? A . n A 1 85 THR 85 618 ? ? ? A . n A 1 86 GLN 86 619 ? ? ? A . n A 1 87 LYS 87 620 ? ? ? A . n A 1 88 ALA 88 621 ? ? ? A . n A 1 89 VAL 89 622 ? ? ? A . n A 1 90 ASN 90 623 ? ? ? A . n A 1 91 SER 91 624 ? ? ? A . n A 1 92 ALA 92 625 ? ? ? A . n A 1 93 THR 93 626 ? ? ? A . n A 1 94 GLY 94 627 ? ? ? A . n A 1 95 VAL 95 628 ? ? ? A . n A 1 96 PRO 96 629 ? ? ? A . n A 1 97 THR 97 630 ? ? ? A . n A 1 98 VAL 98 631 ? ? ? A . n B 1 1 GLY 1 0 ? ? ? B . n B 1 2 GLN 2 535 ? ? ? B . n B 1 3 GLY 3 536 ? ? ? B . n B 1 4 GLN 4 537 ? ? ? B . n B 1 5 GLU 5 538 538 GLU GLU B . n B 1 6 THR 6 539 539 THR THR B . n B 1 7 LEU 7 540 540 LEU LEU B . n B 1 8 THR 8 541 541 THR THR B . n B 1 9 ALA 9 542 542 ALA ALA B . n B 1 10 SER 10 543 543 SER SER B . n B 1 11 ARG 11 544 544 ARG ARG B . n B 1 12 LEU 12 545 545 LEU LEU B . n B 1 13 ALA 13 546 546 ALA ALA B . n B 1 14 SER 14 547 547 SER SER B . n B 1 15 ALA 15 548 548 ALA ALA B . n B 1 16 PRO 16 549 549 PRO PRO B . n B 1 17 PRO 17 550 550 PRO PRO B . n B 1 18 GLN 18 551 551 GLN GLN B . n B 1 19 LYS 19 552 552 LYS LYS B . n B 1 20 GLN 20 553 553 GLN GLN B . n B 1 21 LYS 21 554 554 LYS LYS B . n B 1 22 GLN 22 555 555 GLN GLN B . n B 1 23 MSE 23 556 556 MSE MSE B . n B 1 24 LEU 24 557 557 LEU LEU B . n B 1 25 GLY 25 558 558 GLY GLY B . n B 1 26 GLU 26 559 559 GLU GLU B . n B 1 27 ARG 27 560 560 ARG ARG B . n B 1 28 LEU 28 561 561 LEU LEU B . n B 1 29 PHE 29 562 562 PHE PHE B . n B 1 30 PRO 30 563 563 PRO PRO B . n B 1 31 LEU 31 564 564 LEU LEU B . n B 1 32 ILE 32 565 565 ILE ILE B . n B 1 33 GLN 33 566 566 GLN GLN B . n B 1 34 ALA 34 567 567 ALA ALA B . n B 1 35 MSE 35 568 568 MSE MSE B . n B 1 36 HIS 36 569 569 HIS HIS B . n B 1 37 PRO 37 570 570 PRO PRO B . n B 1 38 THR 38 571 571 THR THR B . n B 1 39 LEU 39 572 572 LEU LEU B . n B 1 40 ALA 40 573 573 ALA ALA B . n B 1 41 GLY 41 574 574 GLY GLY B . n B 1 42 LYS 42 575 575 LYS LYS B . n B 1 43 ILE 43 576 576 ILE ILE B . n B 1 44 THR 44 577 577 THR THR B . n B 1 45 GLY 45 578 578 GLY GLY B . n B 1 46 MSE 46 579 579 MSE MSE B . n B 1 47 LEU 47 580 580 LEU LEU B . n B 1 48 LEU 48 581 581 LEU LEU B . n B 1 49 GLU 49 582 582 GLU GLU B . n B 1 50 ILE 50 583 583 ILE ILE B . n B 1 51 ASP 51 584 584 ASP ASP B . n B 1 52 ASN 52 585 585 ASN ASN B . n B 1 53 SER 53 586 586 SER SER B . n B 1 54 GLU 54 587 587 GLU GLU B . n B 1 55 LEU 55 588 588 LEU LEU B . n B 1 56 LEU 56 589 589 LEU LEU B . n B 1 57 TYR 57 590 590 TYR TYR B . n B 1 58 MSE 58 591 591 MSE MSE B . n B 1 59 LEU 59 592 592 LEU LEU B . n B 1 60 GLU 60 593 593 GLU GLU B . n B 1 61 SER 61 594 594 SER SER B . n B 1 62 PRO 62 595 595 PRO PRO B . n B 1 63 GLU 63 596 596 GLU GLU B . n B 1 64 SER 64 597 597 SER SER B . n B 1 65 LEU 65 598 598 LEU LEU B . n B 1 66 ARG 66 599 599 ARG ARG B . n B 1 67 SER 67 600 600 SER SER B . n B 1 68 LYS 68 601 601 LYS LYS B . n B 1 69 VAL 69 602 602 VAL VAL B . n B 1 70 ASP 70 603 603 ASP ASP B . n B 1 71 GLU 71 604 604 GLU GLU B . n B 1 72 ALA 72 605 605 ALA ALA B . n B 1 73 VAL 73 606 606 VAL VAL B . n B 1 74 ALA 74 607 607 ALA ALA B . n B 1 75 VAL 75 608 608 VAL VAL B . n B 1 76 LEU 76 609 609 LEU LEU B . n B 1 77 GLN 77 610 610 GLN GLN B . n B 1 78 ALA 78 611 611 ALA ALA B . n B 1 79 HIS 79 612 612 HIS HIS B . n B 1 80 GLN 80 613 613 GLN GLN B . n B 1 81 ALA 81 614 614 ALA ALA B . n B 1 82 LYS 82 615 ? ? ? B . n B 1 83 GLU 83 616 ? ? ? B . n B 1 84 ALA 84 617 ? ? ? B . n B 1 85 THR 85 618 ? ? ? B . n B 1 86 GLN 86 619 ? ? ? B . n B 1 87 LYS 87 620 ? ? ? B . n B 1 88 ALA 88 621 ? ? ? B . n B 1 89 VAL 89 622 ? ? ? B . n B 1 90 ASN 90 623 ? ? ? B . n B 1 91 SER 91 624 ? ? ? B . n B 1 92 ALA 92 625 ? ? ? B . n B 1 93 THR 93 626 ? ? ? B . n B 1 94 GLY 94 627 ? ? ? B . n B 1 95 VAL 95 628 ? ? ? B . n B 1 96 PRO 96 629 ? ? ? B . n B 1 97 THR 97 630 ? ? ? B . n B 1 98 VAL 98 631 ? ? ? B . n C 1 1 GLY 1 0 ? ? ? C . n C 1 2 GLN 2 535 ? ? ? C . n C 1 3 GLY 3 536 ? ? ? C . n C 1 4 GLN 4 537 ? ? ? C . n C 1 5 GLU 5 538 538 GLU GLU C . n C 1 6 THR 6 539 539 THR THR C . n C 1 7 LEU 7 540 540 LEU LEU C . n C 1 8 THR 8 541 541 THR THR C . n C 1 9 ALA 9 542 542 ALA ALA C . n C 1 10 SER 10 543 543 SER SER C . n C 1 11 ARG 11 544 544 ARG ARG C . n C 1 12 LEU 12 545 545 LEU LEU C . n C 1 13 ALA 13 546 546 ALA ALA C . n C 1 14 SER 14 547 547 SER SER C . n C 1 15 ALA 15 548 548 ALA ALA C . n C 1 16 PRO 16 549 549 PRO PRO C . n C 1 17 PRO 17 550 550 PRO PRO C . n C 1 18 GLN 18 551 551 GLN GLN C . n C 1 19 LYS 19 552 552 LYS LYS C . n C 1 20 GLN 20 553 553 GLN GLN C . n C 1 21 LYS 21 554 554 LYS LYS C . n C 1 22 GLN 22 555 555 GLN GLN C . n C 1 23 MSE 23 556 556 MSE MSE C . n C 1 24 LEU 24 557 557 LEU LEU C . n C 1 25 GLY 25 558 558 GLY GLY C . n C 1 26 GLU 26 559 559 GLU GLU C . n C 1 27 ARG 27 560 560 ARG ARG C . n C 1 28 LEU 28 561 561 LEU LEU C . n C 1 29 PHE 29 562 562 PHE PHE C . n C 1 30 PRO 30 563 563 PRO PRO C . n C 1 31 LEU 31 564 564 LEU LEU C . n C 1 32 ILE 32 565 565 ILE ILE C . n C 1 33 GLN 33 566 566 GLN GLN C . n C 1 34 ALA 34 567 567 ALA ALA C . n C 1 35 MSE 35 568 568 MSE MSE C . n C 1 36 HIS 36 569 569 HIS HIS C . n C 1 37 PRO 37 570 570 PRO PRO C . n C 1 38 THR 38 571 571 THR THR C . n C 1 39 LEU 39 572 572 LEU LEU C . n C 1 40 ALA 40 573 573 ALA ALA C . n C 1 41 GLY 41 574 574 GLY GLY C . n C 1 42 LYS 42 575 575 LYS LYS C . n C 1 43 ILE 43 576 576 ILE ILE C . n C 1 44 THR 44 577 577 THR THR C . n C 1 45 GLY 45 578 578 GLY GLY C . n C 1 46 MSE 46 579 579 MSE MSE C . n C 1 47 LEU 47 580 580 LEU LEU C . n C 1 48 LEU 48 581 581 LEU LEU C . n C 1 49 GLU 49 582 582 GLU GLU C . n C 1 50 ILE 50 583 583 ILE ILE C . n C 1 51 ASP 51 584 584 ASP ASP C . n C 1 52 ASN 52 585 585 ASN ASN C . n C 1 53 SER 53 586 586 SER SER C . n C 1 54 GLU 54 587 587 GLU GLU C . n C 1 55 LEU 55 588 588 LEU LEU C . n C 1 56 LEU 56 589 589 LEU LEU C . n C 1 57 TYR 57 590 590 TYR TYR C . n C 1 58 MSE 58 591 591 MSE MSE C . n C 1 59 LEU 59 592 592 LEU LEU C . n C 1 60 GLU 60 593 593 GLU GLU C . n C 1 61 SER 61 594 594 SER SER C . n C 1 62 PRO 62 595 595 PRO PRO C . n C 1 63 GLU 63 596 596 GLU GLU C . n C 1 64 SER 64 597 597 SER SER C . n C 1 65 LEU 65 598 598 LEU LEU C . n C 1 66 ARG 66 599 599 ARG ARG C . n C 1 67 SER 67 600 600 SER SER C . n C 1 68 LYS 68 601 601 LYS LYS C . n C 1 69 VAL 69 602 602 VAL VAL C . n C 1 70 ASP 70 603 603 ASP ASP C . n C 1 71 GLU 71 604 604 GLU GLU C . n C 1 72 ALA 72 605 605 ALA ALA C . n C 1 73 VAL 73 606 606 VAL VAL C . n C 1 74 ALA 74 607 607 ALA ALA C . n C 1 75 VAL 75 608 608 VAL VAL C . n C 1 76 LEU 76 609 609 LEU LEU C . n C 1 77 GLN 77 610 610 GLN GLN C . n C 1 78 ALA 78 611 611 ALA ALA C . n C 1 79 HIS 79 612 612 HIS HIS C . n C 1 80 GLN 80 613 613 GLN GLN C . n C 1 81 ALA 81 614 ? ? ? C . n C 1 82 LYS 82 615 ? ? ? C . n C 1 83 GLU 83 616 ? ? ? C . n C 1 84 ALA 84 617 ? ? ? C . n C 1 85 THR 85 618 ? ? ? C . n C 1 86 GLN 86 619 ? ? ? C . n C 1 87 LYS 87 620 ? ? ? C . n C 1 88 ALA 88 621 ? ? ? C . n C 1 89 VAL 89 622 ? ? ? C . n C 1 90 ASN 90 623 ? ? ? C . n C 1 91 SER 91 624 ? ? ? C . n C 1 92 ALA 92 625 ? ? ? C . n C 1 93 THR 93 626 ? ? ? C . n C 1 94 GLY 94 627 ? ? ? C . n C 1 95 VAL 95 628 ? ? ? C . n C 1 96 PRO 96 629 ? ? ? C . n C 1 97 THR 97 630 ? ? ? C . n C 1 98 VAL 98 631 ? ? ? C . n D 1 1 GLY 1 0 ? ? ? D . n D 1 2 GLN 2 535 ? ? ? D . n D 1 3 GLY 3 536 ? ? ? D . n D 1 4 GLN 4 537 ? ? ? D . n D 1 5 GLU 5 538 538 GLU GLU D . n D 1 6 THR 6 539 539 THR THR D . n D 1 7 LEU 7 540 540 LEU LEU D . n D 1 8 THR 8 541 541 THR THR D . n D 1 9 ALA 9 542 542 ALA ALA D . n D 1 10 SER 10 543 543 SER SER D . n D 1 11 ARG 11 544 544 ARG ARG D . n D 1 12 LEU 12 545 545 LEU LEU D . n D 1 13 ALA 13 546 546 ALA ALA D . n D 1 14 SER 14 547 547 SER SER D . n D 1 15 ALA 15 548 548 ALA ALA D . n D 1 16 PRO 16 549 549 PRO PRO D . n D 1 17 PRO 17 550 550 PRO PRO D . n D 1 18 GLN 18 551 551 GLN GLN D . n D 1 19 LYS 19 552 552 LYS LYS D . n D 1 20 GLN 20 553 553 GLN GLN D . n D 1 21 LYS 21 554 554 LYS LYS D . n D 1 22 GLN 22 555 555 GLN GLN D . n D 1 23 MSE 23 556 556 MSE MSE D . n D 1 24 LEU 24 557 557 LEU LEU D . n D 1 25 GLY 25 558 558 GLY GLY D . n D 1 26 GLU 26 559 559 GLU GLU D . n D 1 27 ARG 27 560 560 ARG ARG D . n D 1 28 LEU 28 561 561 LEU LEU D . n D 1 29 PHE 29 562 562 PHE PHE D . n D 1 30 PRO 30 563 563 PRO PRO D . n D 1 31 LEU 31 564 564 LEU LEU D . n D 1 32 ILE 32 565 565 ILE ILE D . n D 1 33 GLN 33 566 566 GLN GLN D . n D 1 34 ALA 34 567 567 ALA ALA D . n D 1 35 MSE 35 568 568 MSE MSE D . n D 1 36 HIS 36 569 569 HIS HIS D . n D 1 37 PRO 37 570 570 PRO PRO D . n D 1 38 THR 38 571 571 THR THR D . n D 1 39 LEU 39 572 572 LEU LEU D . n D 1 40 ALA 40 573 573 ALA ALA D . n D 1 41 GLY 41 574 574 GLY GLY D . n D 1 42 LYS 42 575 575 LYS LYS D . n D 1 43 ILE 43 576 576 ILE ILE D . n D 1 44 THR 44 577 577 THR THR D . n D 1 45 GLY 45 578 578 GLY GLY D . n D 1 46 MSE 46 579 579 MSE MSE D . n D 1 47 LEU 47 580 580 LEU LEU D . n D 1 48 LEU 48 581 581 LEU LEU D . n D 1 49 GLU 49 582 582 GLU GLU D . n D 1 50 ILE 50 583 583 ILE ILE D . n D 1 51 ASP 51 584 584 ASP ASP D . n D 1 52 ASN 52 585 585 ASN ASN D . n D 1 53 SER 53 586 586 SER SER D . n D 1 54 GLU 54 587 587 GLU GLU D . n D 1 55 LEU 55 588 588 LEU LEU D . n D 1 56 LEU 56 589 589 LEU LEU D . n D 1 57 TYR 57 590 590 TYR TYR D . n D 1 58 MSE 58 591 591 MSE MSE D . n D 1 59 LEU 59 592 592 LEU LEU D . n D 1 60 GLU 60 593 593 GLU GLU D . n D 1 61 SER 61 594 594 SER SER D . n D 1 62 PRO 62 595 595 PRO PRO D . n D 1 63 GLU 63 596 596 GLU GLU D . n D 1 64 SER 64 597 597 SER SER D . n D 1 65 LEU 65 598 598 LEU LEU D . n D 1 66 ARG 66 599 599 ARG ARG D . n D 1 67 SER 67 600 600 SER SER D . n D 1 68 LYS 68 601 601 LYS LYS D . n D 1 69 VAL 69 602 602 VAL VAL D . n D 1 70 ASP 70 603 603 ASP ASP D . n D 1 71 GLU 71 604 604 GLU GLU D . n D 1 72 ALA 72 605 605 ALA ALA D . n D 1 73 VAL 73 606 606 VAL VAL D . n D 1 74 ALA 74 607 607 ALA ALA D . n D 1 75 VAL 75 608 608 VAL VAL D . n D 1 76 LEU 76 609 609 LEU LEU D . n D 1 77 GLN 77 610 610 GLN GLN D . n D 1 78 ALA 78 611 611 ALA ALA D . n D 1 79 HIS 79 612 612 HIS HIS D . n D 1 80 GLN 80 613 613 GLN GLN D . n D 1 81 ALA 81 614 ? ? ? D . n D 1 82 LYS 82 615 ? ? ? D . n D 1 83 GLU 83 616 ? ? ? D . n D 1 84 ALA 84 617 ? ? ? D . n D 1 85 THR 85 618 ? ? ? D . n D 1 86 GLN 86 619 ? ? ? D . n D 1 87 LYS 87 620 ? ? ? D . n D 1 88 ALA 88 621 ? ? ? D . n D 1 89 VAL 89 622 ? ? ? D . n D 1 90 ASN 90 623 ? ? ? D . n D 1 91 SER 91 624 ? ? ? D . n D 1 92 ALA 92 625 ? ? ? D . n D 1 93 THR 93 626 ? ? ? D . n D 1 94 GLY 94 627 ? ? ? D . n D 1 95 VAL 95 628 ? ? ? D . n D 1 96 PRO 96 629 ? ? ? D . n D 1 97 THR 97 630 ? ? ? D . n D 1 98 VAL 98 631 ? ? ? D . n # loop_ _pdbx_SG_project.project_name _pdbx_SG_project.full_name_of_center _pdbx_SG_project.id _pdbx_SG_project.initial_of_center PSI:Biology 'Joint Center for Structural Genomics' 1 JCSG PSI:Biology 'Partnership for T-Cell Biology' 2 TCELL # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 CL 1 701 636 CL CL A . F 2 CL 1 701 635 CL CL C . G 3 HOH 1 801 645 HOH HOH A . G 3 HOH 2 802 647 HOH HOH A . G 3 HOH 3 803 648 HOH HOH A . G 3 HOH 4 804 651 HOH HOH A . G 3 HOH 5 805 654 HOH HOH A . G 3 HOH 6 806 659 HOH HOH A . G 3 HOH 7 807 660 HOH HOH A . G 3 HOH 8 808 661 HOH HOH A . G 3 HOH 9 809 666 HOH HOH A . G 3 HOH 10 810 668 HOH HOH A . G 3 HOH 11 811 674 HOH HOH A . G 3 HOH 12 812 675 HOH HOH A . G 3 HOH 13 813 677 HOH HOH A . G 3 HOH 14 814 705 HOH HOH A . G 3 HOH 15 815 706 HOH HOH A . G 3 HOH 16 816 718 HOH HOH A . G 3 HOH 17 817 725 HOH HOH A . G 3 HOH 18 818 726 HOH HOH A . G 3 HOH 19 819 727 HOH HOH A . G 3 HOH 20 820 728 HOH HOH A . G 3 HOH 21 821 730 HOH HOH A . G 3 HOH 22 822 732 HOH HOH A . G 3 HOH 23 823 746 HOH HOH A . G 3 HOH 24 824 750 HOH HOH A . G 3 HOH 25 825 751 HOH HOH A . G 3 HOH 26 826 753 HOH HOH A . G 3 HOH 27 827 755 HOH HOH A . G 3 HOH 28 828 759 HOH HOH A . G 3 HOH 29 829 760 HOH HOH A . G 3 HOH 30 830 764 HOH HOH A . G 3 HOH 31 831 765 HOH HOH A . G 3 HOH 32 832 766 HOH HOH A . H 3 HOH 1 701 637 HOH HOH B . H 3 HOH 2 702 639 HOH HOH B . H 3 HOH 3 703 642 HOH HOH B . H 3 HOH 4 704 643 HOH HOH B . H 3 HOH 5 705 658 HOH HOH B . H 3 HOH 6 706 664 HOH HOH B . H 3 HOH 7 707 665 HOH HOH B . H 3 HOH 8 708 667 HOH HOH B . H 3 HOH 9 709 670 HOH HOH B . H 3 HOH 10 710 673 HOH HOH B . H 3 HOH 11 711 682 HOH HOH B . H 3 HOH 12 712 691 HOH HOH B . H 3 HOH 13 713 693 HOH HOH B . H 3 HOH 14 714 694 HOH HOH B . H 3 HOH 15 715 698 HOH HOH B . H 3 HOH 16 716 700 HOH HOH B . H 3 HOH 17 717 702 HOH HOH B . H 3 HOH 18 718 711 HOH HOH B . H 3 HOH 19 719 716 HOH HOH B . H 3 HOH 20 720 734 HOH HOH B . H 3 HOH 21 721 735 HOH HOH B . H 3 HOH 22 722 739 HOH HOH B . H 3 HOH 23 723 741 HOH HOH B . H 3 HOH 24 724 744 HOH HOH B . H 3 HOH 25 725 745 HOH HOH B . H 3 HOH 26 726 747 HOH HOH B . H 3 HOH 27 727 748 HOH HOH B . H 3 HOH 28 728 749 HOH HOH B . H 3 HOH 29 729 757 HOH HOH B . H 3 HOH 30 730 763 HOH HOH B . I 3 HOH 1 801 640 HOH HOH C . I 3 HOH 2 802 641 HOH HOH C . I 3 HOH 3 803 644 HOH HOH C . I 3 HOH 4 804 646 HOH HOH C . I 3 HOH 5 805 655 HOH HOH C . I 3 HOH 6 806 656 HOH HOH C . I 3 HOH 7 807 671 HOH HOH C . I 3 HOH 8 808 672 HOH HOH C . I 3 HOH 9 809 678 HOH HOH C . I 3 HOH 10 810 680 HOH HOH C . I 3 HOH 11 811 681 HOH HOH C . I 3 HOH 12 812 685 HOH HOH C . I 3 HOH 13 813 687 HOH HOH C . I 3 HOH 14 814 689 HOH HOH C . I 3 HOH 15 815 690 HOH HOH C . I 3 HOH 16 816 695 HOH HOH C . I 3 HOH 17 817 699 HOH HOH C . I 3 HOH 18 818 703 HOH HOH C . I 3 HOH 19 819 709 HOH HOH C . I 3 HOH 20 820 713 HOH HOH C . I 3 HOH 21 821 714 HOH HOH C . I 3 HOH 22 822 717 HOH HOH C . I 3 HOH 23 823 719 HOH HOH C . I 3 HOH 24 824 720 HOH HOH C . I 3 HOH 25 825 722 HOH HOH C . I 3 HOH 26 826 724 HOH HOH C . I 3 HOH 27 827 733 HOH HOH C . I 3 HOH 28 828 736 HOH HOH C . I 3 HOH 29 829 740 HOH HOH C . I 3 HOH 30 830 742 HOH HOH C . I 3 HOH 31 831 743 HOH HOH C . I 3 HOH 32 832 752 HOH HOH C . I 3 HOH 33 833 756 HOH HOH C . I 3 HOH 34 834 758 HOH HOH C . I 3 HOH 35 835 761 HOH HOH C . I 3 HOH 36 836 762 HOH HOH C . I 3 HOH 37 837 769 HOH HOH C . J 3 HOH 1 701 638 HOH HOH D . J 3 HOH 2 702 649 HOH HOH D . J 3 HOH 3 703 650 HOH HOH D . J 3 HOH 4 704 652 HOH HOH D . J 3 HOH 5 705 653 HOH HOH D . J 3 HOH 6 706 657 HOH HOH D . J 3 HOH 7 707 662 HOH HOH D . J 3 HOH 8 708 663 HOH HOH D . J 3 HOH 9 709 669 HOH HOH D . J 3 HOH 10 710 676 HOH HOH D . J 3 HOH 11 711 679 HOH HOH D . J 3 HOH 12 712 683 HOH HOH D . J 3 HOH 13 713 684 HOH HOH D . J 3 HOH 14 714 686 HOH HOH D . J 3 HOH 15 715 688 HOH HOH D . J 3 HOH 16 716 692 HOH HOH D . J 3 HOH 17 717 696 HOH HOH D . J 3 HOH 18 718 697 HOH HOH D . J 3 HOH 19 719 701 HOH HOH D . J 3 HOH 20 720 704 HOH HOH D . J 3 HOH 21 721 707 HOH HOH D . J 3 HOH 22 722 708 HOH HOH D . J 3 HOH 23 723 710 HOH HOH D . J 3 HOH 24 724 712 HOH HOH D . J 3 HOH 25 725 715 HOH HOH D . J 3 HOH 26 726 721 HOH HOH D . J 3 HOH 27 727 723 HOH HOH D . J 3 HOH 28 728 729 HOH HOH D . J 3 HOH 29 729 731 HOH HOH D . J 3 HOH 30 730 737 HOH HOH D . J 3 HOH 31 731 738 HOH HOH D . J 3 HOH 32 732 754 HOH HOH D . J 3 HOH 33 733 767 HOH HOH D . J 3 HOH 34 734 768 HOH HOH D . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 23 A MSE 556 ? MET SELENOMETHIONINE 2 A MSE 35 A MSE 568 ? MET SELENOMETHIONINE 3 A MSE 46 A MSE 579 ? MET SELENOMETHIONINE 4 A MSE 58 A MSE 591 ? MET SELENOMETHIONINE 5 B MSE 23 B MSE 556 ? MET SELENOMETHIONINE 6 B MSE 35 B MSE 568 ? MET SELENOMETHIONINE 7 B MSE 46 B MSE 579 ? MET SELENOMETHIONINE 8 B MSE 58 B MSE 591 ? MET SELENOMETHIONINE 9 C MSE 23 C MSE 556 ? MET SELENOMETHIONINE 10 C MSE 35 C MSE 568 ? MET SELENOMETHIONINE 11 C MSE 46 C MSE 579 ? MET SELENOMETHIONINE 12 C MSE 58 C MSE 591 ? MET SELENOMETHIONINE 13 D MSE 23 D MSE 556 ? MET SELENOMETHIONINE 14 D MSE 35 D MSE 568 ? MET SELENOMETHIONINE 15 D MSE 46 D MSE 579 ? MET SELENOMETHIONINE 16 D MSE 58 D MSE 591 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA tetrameric 4 2 software_defined_assembly PISA dimeric 2 3 software_defined_assembly PISA dimeric 2 4 author_defined_assembly ? monomeric 1 5 author_defined_assembly ? monomeric 1 6 author_defined_assembly ? monomeric 1 7 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I,J 2 1 A,B,E,G,H 3 1 C,D,F,I,J 4 1 A,E,G 5 1 B,H 6 1 C,F,I 7 1 D,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5510 ? 1 MORE -40 ? 1 'SSA (A^2)' 14880 ? 2 'ABSA (A^2)' 1710 ? 2 MORE -15 ? 2 'SSA (A^2)' 8490 ? 3 'ABSA (A^2)' 1710 ? 3 MORE -15 ? 3 'SSA (A^2)' 8470 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-02-06 2 'Structure model' 1 1 2017-11-15 3 'Structure model' 1 2 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Refinement description' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' software 2 3 'Structure model' database_2 3 3 'Structure model' struct_conn 4 3 'Structure model' struct_ref_seq_dif 5 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_ref_seq_dif.details' 5 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 32.5961 5.2067 34.9959 -0.1722 -0.0079 -0.1571 0.0411 0.0436 0.0104 5.2051 2.7463 8.3043 -0.5073 -2.9104 1.7077 -0.1195 0.0914 0.0281 0.4790 -0.0245 0.2472 0.0176 -0.0230 -0.4441 'X-RAY DIFFRACTION' 2 ? refined 14.0336 10.1033 40.7462 -0.2594 0.1354 -0.1581 0.1520 -0.0471 -0.0262 4.5334 2.0930 8.3155 -0.1746 -1.3191 1.3940 0.1601 -0.3809 0.2208 0.5442 0.2683 0.2485 -0.2480 -0.4700 -0.5442 'X-RAY DIFFRACTION' 3 ? refined 12.4094 14.5409 67.0452 -0.1353 -0.1298 -0.1187 0.0207 0.0392 -0.0395 4.8886 7.5299 4.2650 -2.6500 -0.6239 -0.0312 -0.0234 -0.1305 0.1540 -0.0686 -0.5442 0.4828 0.5297 -0.1313 -0.2367 'X-RAY DIFFRACTION' 4 ? refined 27.6101 2.7740 61.1619 -0.1614 -0.0136 -0.0624 0.0313 0.0315 0.0475 1.7851 2.7042 8.3155 -0.8429 0.1631 -1.7318 -0.0432 -0.3216 0.3648 -0.0238 -0.0661 -0.2696 -0.0481 0.2565 0.5148 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 537 A 612 '{A|537 - 612}' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 538 B 614 '{B|538 - 614}' ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 C 538 C 613 '{C|538 - 613}' ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 D 538 D 613 '{D|538 - 613}' ? ? ? ? ? # _phasing.method MAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 4 SHARP . ? package 'Eric de La Fortelle' sharp-develop@globalphasing.com phasing http://www.globalphasing.com/sharp/ ? ? 5 XSCALE 'March 15, 2012' ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 6 BUSTER-TNT 2.10.0 ? program 'Gerard Bricogne' buster-develop@GlobalPhasing.com refinement http://www.globalphasing.com/buster/ ? ? 7 XDS . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 BUSTER 2.10.0 ? ? ? ? refinement ? ? ? # _pdbx_entry_details.entry_id 4IVE _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT (535-631) WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR B 571 ? ? -60.18 -84.96 2 1 LEU B 572 ? ? -98.79 42.72 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A HIS 612 ? CG ? A HIS 79 CG 2 1 Y 1 A HIS 612 ? ND1 ? A HIS 79 ND1 3 1 Y 1 A HIS 612 ? CD2 ? A HIS 79 CD2 4 1 Y 1 A HIS 612 ? CE1 ? A HIS 79 CE1 5 1 Y 1 A HIS 612 ? NE2 ? A HIS 79 NE2 6 1 Y 1 B GLU 538 ? CG ? B GLU 5 CG 7 1 Y 1 B GLU 538 ? CD ? B GLU 5 CD 8 1 Y 1 B GLU 538 ? OE1 ? B GLU 5 OE1 9 1 Y 1 B GLU 538 ? OE2 ? B GLU 5 OE2 10 1 Y 1 B GLN 613 ? CG ? B GLN 80 CG 11 1 Y 1 B GLN 613 ? CD ? B GLN 80 CD 12 1 Y 1 B GLN 613 ? OE1 ? B GLN 80 OE1 13 1 Y 1 B GLN 613 ? NE2 ? B GLN 80 NE2 14 1 Y 1 C GLU 538 ? CG ? C GLU 5 CG 15 1 Y 1 C GLU 538 ? CD ? C GLU 5 CD 16 1 Y 1 C GLU 538 ? OE1 ? C GLU 5 OE1 17 1 Y 1 C GLU 538 ? OE2 ? C GLU 5 OE2 18 1 Y 1 C ARG 544 ? CG ? C ARG 11 CG 19 1 Y 1 C ARG 544 ? CD ? C ARG 11 CD 20 1 Y 1 C ARG 544 ? NE ? C ARG 11 NE 21 1 Y 1 C ARG 544 ? CZ ? C ARG 11 CZ 22 1 Y 1 C ARG 544 ? NH1 ? C ARG 11 NH1 23 1 Y 1 C ARG 544 ? NH2 ? C ARG 11 NH2 24 1 Y 1 C GLN 613 ? CG ? C GLN 80 CG 25 1 Y 1 C GLN 613 ? CD ? C GLN 80 CD 26 1 Y 1 C GLN 613 ? OE1 ? C GLN 80 OE1 27 1 Y 1 C GLN 613 ? NE2 ? C GLN 80 NE2 28 1 Y 1 D GLU 538 ? CG ? D GLU 5 CG 29 1 Y 1 D GLU 538 ? CD ? D GLU 5 CD 30 1 Y 1 D GLU 538 ? OE1 ? D GLU 5 OE1 31 1 Y 1 D GLU 538 ? OE2 ? D GLU 5 OE2 32 1 Y 1 D GLN 613 ? CG ? D GLN 80 CG 33 1 Y 1 D GLN 613 ? CD ? D GLN 80 CD 34 1 Y 1 D GLN 613 ? OE1 ? D GLN 80 OE1 35 1 Y 1 D GLN 613 ? NE2 ? D GLN 80 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A GLN 535 ? A GLN 2 3 1 Y 1 A GLY 536 ? A GLY 3 4 1 Y 1 A GLN 613 ? A GLN 80 5 1 Y 1 A ALA 614 ? A ALA 81 6 1 Y 1 A LYS 615 ? A LYS 82 7 1 Y 1 A GLU 616 ? A GLU 83 8 1 Y 1 A ALA 617 ? A ALA 84 9 1 Y 1 A THR 618 ? A THR 85 10 1 Y 1 A GLN 619 ? A GLN 86 11 1 Y 1 A LYS 620 ? A LYS 87 12 1 Y 1 A ALA 621 ? A ALA 88 13 1 Y 1 A VAL 622 ? A VAL 89 14 1 Y 1 A ASN 623 ? A ASN 90 15 1 Y 1 A SER 624 ? A SER 91 16 1 Y 1 A ALA 625 ? A ALA 92 17 1 Y 1 A THR 626 ? A THR 93 18 1 Y 1 A GLY 627 ? A GLY 94 19 1 Y 1 A VAL 628 ? A VAL 95 20 1 Y 1 A PRO 629 ? A PRO 96 21 1 Y 1 A THR 630 ? A THR 97 22 1 Y 1 A VAL 631 ? A VAL 98 23 1 Y 1 B GLY 0 ? B GLY 1 24 1 Y 1 B GLN 535 ? B GLN 2 25 1 Y 1 B GLY 536 ? B GLY 3 26 1 Y 1 B GLN 537 ? B GLN 4 27 1 Y 1 B LYS 615 ? B LYS 82 28 1 Y 1 B GLU 616 ? B GLU 83 29 1 Y 1 B ALA 617 ? B ALA 84 30 1 Y 1 B THR 618 ? B THR 85 31 1 Y 1 B GLN 619 ? B GLN 86 32 1 Y 1 B LYS 620 ? B LYS 87 33 1 Y 1 B ALA 621 ? B ALA 88 34 1 Y 1 B VAL 622 ? B VAL 89 35 1 Y 1 B ASN 623 ? B ASN 90 36 1 Y 1 B SER 624 ? B SER 91 37 1 Y 1 B ALA 625 ? B ALA 92 38 1 Y 1 B THR 626 ? B THR 93 39 1 Y 1 B GLY 627 ? B GLY 94 40 1 Y 1 B VAL 628 ? B VAL 95 41 1 Y 1 B PRO 629 ? B PRO 96 42 1 Y 1 B THR 630 ? B THR 97 43 1 Y 1 B VAL 631 ? B VAL 98 44 1 Y 1 C GLY 0 ? C GLY 1 45 1 Y 1 C GLN 535 ? C GLN 2 46 1 Y 1 C GLY 536 ? C GLY 3 47 1 Y 1 C GLN 537 ? C GLN 4 48 1 Y 1 C ALA 614 ? C ALA 81 49 1 Y 1 C LYS 615 ? C LYS 82 50 1 Y 1 C GLU 616 ? C GLU 83 51 1 Y 1 C ALA 617 ? C ALA 84 52 1 Y 1 C THR 618 ? C THR 85 53 1 Y 1 C GLN 619 ? C GLN 86 54 1 Y 1 C LYS 620 ? C LYS 87 55 1 Y 1 C ALA 621 ? C ALA 88 56 1 Y 1 C VAL 622 ? C VAL 89 57 1 Y 1 C ASN 623 ? C ASN 90 58 1 Y 1 C SER 624 ? C SER 91 59 1 Y 1 C ALA 625 ? C ALA 92 60 1 Y 1 C THR 626 ? C THR 93 61 1 Y 1 C GLY 627 ? C GLY 94 62 1 Y 1 C VAL 628 ? C VAL 95 63 1 Y 1 C PRO 629 ? C PRO 96 64 1 Y 1 C THR 630 ? C THR 97 65 1 Y 1 C VAL 631 ? C VAL 98 66 1 Y 1 D GLY 0 ? D GLY 1 67 1 Y 1 D GLN 535 ? D GLN 2 68 1 Y 1 D GLY 536 ? D GLY 3 69 1 Y 1 D GLN 537 ? D GLN 4 70 1 Y 1 D ALA 614 ? D ALA 81 71 1 Y 1 D LYS 615 ? D LYS 82 72 1 Y 1 D GLU 616 ? D GLU 83 73 1 Y 1 D ALA 617 ? D ALA 84 74 1 Y 1 D THR 618 ? D THR 85 75 1 Y 1 D GLN 619 ? D GLN 86 76 1 Y 1 D LYS 620 ? D LYS 87 77 1 Y 1 D ALA 621 ? D ALA 88 78 1 Y 1 D VAL 622 ? D VAL 89 79 1 Y 1 D ASN 623 ? D ASN 90 80 1 Y 1 D SER 624 ? D SER 91 81 1 Y 1 D ALA 625 ? D ALA 92 82 1 Y 1 D THR 626 ? D THR 93 83 1 Y 1 D GLY 627 ? D GLY 94 84 1 Y 1 D VAL 628 ? D VAL 95 85 1 Y 1 D PRO 629 ? D PRO 96 86 1 Y 1 D THR 630 ? D THR 97 87 1 Y 1 D VAL 631 ? D VAL 98 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 water HOH #