HEADER HYDROLASE 23-JAN-13 4IVI TITLE CRYSTAL STRUCTURE OF A FAMILY VIII CARBOXYLESTERASE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARBOXYLESTERASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CARBOXYLESTERASES; COMPND 5 EC: 3.1.1.1 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNCULTURED BACTERIUM; SOURCE 3 ORGANISM_TAXID: 77133; SOURCE 4 OTHER_DETAILS: DEEP SEA SEDIMENT KEYWDS CARBOXYLESTERASES BETA-LACTAMASES, HELICAL DOMAIN AND A ALPHA/BETA KEYWDS 2 DOMAIN, DEEP SEA SEDIMENT, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.J.AN,M.-K.KIM,C.-S.JEONG,S.-S.CHA REVDAT 3 24-JAN-18 4IVI 1 AUTHOR REVDAT 2 30-OCT-13 4IVI 1 JRNL REVDAT 1 19-JUN-13 4IVI 0 JRNL AUTH S.S.CHA,Y.J.AN,C.S.JEONG,M.K.KIM,J.H.JEON,C.M.LEE,H.S.LEE, JRNL AUTH 2 S.G.KANG,J.H.LEE JRNL TITL STRUCTURAL BASIS FOR THE BETA-LACTAMASE ACTIVITY OF ESTU1, A JRNL TITL 2 FAMILY VIII CARBOXYLESTERASE. JRNL REF PROTEINS V. 81 2045 2013 JRNL REFN ISSN 0887-3585 JRNL PMID 23737193 JRNL DOI 10.1002/PROT.24334 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 64853 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 6180 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3082 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 399 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4IVI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-FEB-13. REMARK 100 THE DEPOSITION ID IS D_1000077261. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-MAY-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791, 0.9794 , 0.9642 REMARK 200 MONOCHROMATOR : SE WAVELENGTH REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64853 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 75.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.2 M AMMONIUM SULFATE AND 0.1 M TRIS REMARK 280 -HCL (PH 8.5), MICROBATCH, TEMPERATURE 295 K K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 74.53250 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 74.53250 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 85.56550 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 74.53250 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 74.53250 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 85.56550 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 74.53250 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 74.53250 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 85.56550 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 74.53250 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 74.53250 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 85.56550 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 74.53250 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 74.53250 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 85.56550 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 74.53250 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 74.53250 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 85.56550 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 74.53250 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 74.53250 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 85.56550 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 74.53250 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 74.53250 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 85.56550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 56220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 108290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -65.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 6 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 7 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 7 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 927 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 LYS A 2 REMARK 465 THR A 3 REMARK 465 SER A 4 REMARK 465 ALA A 5 REMARK 465 LYS A 6 REMARK 465 PHE A 7 REMARK 465 LEU A 8 REMARK 465 SER A 9 REMARK 465 PHE A 10 REMARK 465 ALA A 11 REMARK 465 VAL A 12 REMARK 465 SER A 13 REMARK 465 PHE A 14 REMARK 465 VAL A 15 REMARK 465 LEU A 16 REMARK 465 LEU A 17 REMARK 465 ILE A 18 REMARK 465 ILE A 19 REMARK 465 ALA A 20 REMARK 465 SER A 21 REMARK 465 THR A 22 REMARK 465 SER A 23 REMARK 465 PHE A 24 REMARK 465 HIS A 429 REMARK 465 HIS A 430 REMARK 465 HIS A 431 REMARK 465 HIS A 432 REMARK 465 HIS A 433 REMARK 465 HIS A 434 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 142 CG CD CE NZ REMARK 470 GLN A 339 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 26 -74.62 174.43 REMARK 500 PHE A 76 91.99 -162.95 REMARK 500 TYR A 99 -118.68 39.44 REMARK 500 THR A 171 -164.84 -123.79 REMARK 500 LEU A 245 -59.89 -128.63 REMARK 500 ASP A 274 46.78 -144.44 REMARK 500 GLN A 296 -8.88 -166.53 REMARK 500 ALA A 340 -7.06 -55.50 REMARK 500 VAL A 369 -63.96 69.46 REMARK 500 VAL A 406 -73.08 -127.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4IVK RELATED DB: PDB DBREF 4IVI A 1 426 UNP K4HQE7 K4HQE7_9BACT 1 426 SEQADV 4IVI LEU A 427 UNP K4HQE7 EXPRESSION TAG SEQADV 4IVI GLU A 428 UNP K4HQE7 EXPRESSION TAG SEQADV 4IVI HIS A 429 UNP K4HQE7 EXPRESSION TAG SEQADV 4IVI HIS A 430 UNP K4HQE7 EXPRESSION TAG SEQADV 4IVI HIS A 431 UNP K4HQE7 EXPRESSION TAG SEQADV 4IVI HIS A 432 UNP K4HQE7 EXPRESSION TAG SEQADV 4IVI HIS A 433 UNP K4HQE7 EXPRESSION TAG SEQADV 4IVI HIS A 434 UNP K4HQE7 EXPRESSION TAG SEQRES 1 A 434 MSE LYS THR SER ALA LYS PHE LEU SER PHE ALA VAL SER SEQRES 2 A 434 PHE VAL LEU LEU ILE ILE ALA SER THR SER PHE ALA GLU SEQRES 3 A 434 GLY PRO VAL THR ALA THR LYS PRO LYS GLU ALA GLY PHE SEQRES 4 A 434 THR SER GLU GLY LEU ALA ARG ILE ASP ALA TYR LEU LYS SEQRES 5 A 434 ASN GLU ILE GLN ALA LYS THR MSE PRO GLY ALA VAL MSE SEQRES 6 A 434 MSE ILE LYS ARG ASN GLY GLU THR ALA TYR PHE SER SER SEQRES 7 A 434 PHE GLY LEU ARG ASP PRO ASP THR LYS GLU PRO MSE THR SEQRES 8 A 434 ALA GLU THR ILE PHE ARG ILE TYR SER MSE SER LYS PRO SEQRES 9 A 434 ILE THR THR VAL ALA ALA MSE MSE LEU VAL GLU GLU GLY SEQRES 10 A 434 LYS LEU GLN LEU ASP GLU PRO VAL SER LYS TYR ILE PRO SEQRES 11 A 434 SER PHE ALA ASN VAL LYS VAL GLY VAL GLU THR LYS GLY SEQRES 12 A 434 GLU ASN GLY MSE ALA LEU GLU THR GLY PRO VAL LYS ARG SEQRES 13 A 434 ALA ILE THR ILE GLN ASP LEU MSE ARG HIS THR SER GLY SEQRES 14 A 434 ILE THR TYR GLY PHE VAL GLY ASP GLY LEU VAL LYS LYS SEQRES 15 A 434 ALA TYR ILE ALA SER ASN LEU PHE ASP GLY ASP PHE ASP SEQRES 16 A 434 ASN ALA GLU PHE ALA GLU ARG ILE ALA LYS LEU PRO LEU SEQRES 17 A 434 VAL TYR GLN PRO GLY THR THR TRP ASP TYR GLY HIS SER SEQRES 18 A 434 THR ASP ILE LEU GLY ARG VAL VAL GLU VAL VAL SER GLY SEQRES 19 A 434 LYS SER LEU TYR GLN PHE GLU LYS GLU ARG LEU LEU ASP SEQRES 20 A 434 PRO LEU GLY MSE LYS ASP THR GLY PHE TYR VAL THR ASP SEQRES 21 A 434 PRO ALA LYS LYS SER LEU VAL ALA GLU ALA MSE PRO ASN SEQRES 22 A 434 ASP ARG LYS ILE GLY GLY SER GLU MSE PHE ASP PRO ARG SEQRES 23 A 434 VAL GLN LYS LYS TRP GLU PRO GLY GLY GLN GLY MSE VAL SEQRES 24 A 434 SER THR ILE GLY ASP TYR ALA ARG PHE THR GLN MSE VAL SEQRES 25 A 434 LEU ASN GLY GLY THR LEU ASP GLY LYS ARG TYR LEU SER SEQRES 26 A 434 PRO LYS THR ILE ALA TYR MSE GLY SER ASN HIS ILE PRO SEQRES 27 A 434 GLN ALA SER GLY ILE VAL PRO GLY ALA TYR TYR LEU PRO SEQRES 28 A 434 GLY PRO GLY VAL GLY PHE GLY LEU GLY PHE ALA VAL ARG SEQRES 29 A 434 THR GLU ALA GLY VAL THR PRO VAL GLU GLY SER VAL GLY SEQRES 30 A 434 ASP LEU SER TRP GLY GLY ALA GLY GLY THR VAL PHE TRP SEQRES 31 A 434 ILE ASP PRO LYS GLU ASN LEU THR VAL VAL PHE MSE ALA SEQRES 32 A 434 PRO MSE VAL SER PRO ARG ALA ARG VAL TRP ARG THR LEU SEQRES 33 A 434 ARG ASN ILE VAL TYR GLY ALA PHE ASP ARG LEU GLU HIS SEQRES 34 A 434 HIS HIS HIS HIS HIS MODRES 4IVI MSE A 60 MET SELENOMETHIONINE MODRES 4IVI MSE A 65 MET SELENOMETHIONINE MODRES 4IVI MSE A 66 MET SELENOMETHIONINE MODRES 4IVI MSE A 90 MET SELENOMETHIONINE MODRES 4IVI MSE A 101 MET SELENOMETHIONINE MODRES 4IVI MSE A 111 MET SELENOMETHIONINE MODRES 4IVI MSE A 112 MET SELENOMETHIONINE MODRES 4IVI MSE A 147 MET SELENOMETHIONINE MODRES 4IVI MSE A 164 MET SELENOMETHIONINE MODRES 4IVI MSE A 251 MET SELENOMETHIONINE MODRES 4IVI MSE A 271 MET SELENOMETHIONINE MODRES 4IVI MSE A 282 MET SELENOMETHIONINE MODRES 4IVI MSE A 298 MET SELENOMETHIONINE MODRES 4IVI MSE A 311 MET SELENOMETHIONINE MODRES 4IVI MSE A 332 MET SELENOMETHIONINE MODRES 4IVI MSE A 402 MET SELENOMETHIONINE MODRES 4IVI MSE A 405 MET SELENOMETHIONINE HET MSE A 60 8 HET MSE A 65 8 HET MSE A 66 8 HET MSE A 90 8 HET MSE A 101 8 HET MSE A 111 8 HET MSE A 112 8 HET MSE A 147 8 HET MSE A 164 8 HET MSE A 251 8 HET MSE A 271 8 HET MSE A 282 8 HET MSE A 298 8 HET MSE A 311 8 HET MSE A 332 8 HET MSE A 402 8 HET MSE A 405 8 HET SO4 A 501 5 HET SO4 A 502 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION FORMUL 1 MSE 17(C5 H11 N O2 SE) FORMUL 2 SO4 2(O4 S 2-) FORMUL 4 HOH *399(H2 O) HELIX 1 1 THR A 40 ALA A 57 1 18 HELIX 2 2 MSE A 101 GLU A 116 1 16 HELIX 3 3 PRO A 124 TYR A 128 5 5 HELIX 4 4 ILE A 129 ALA A 133 5 5 HELIX 5 5 THR A 159 HIS A 166 1 8 HELIX 6 6 GLY A 178 SER A 187 1 10 HELIX 7 7 ASP A 195 LYS A 205 1 11 HELIX 8 8 HIS A 220 GLY A 234 1 15 HELIX 9 9 SER A 236 LEU A 245 1 10 HELIX 10 10 LEU A 245 GLY A 250 1 6 HELIX 11 11 LYS A 263 VAL A 267 5 5 HELIX 12 12 MSE A 271 ASP A 274 5 4 HELIX 13 13 THR A 301 ASN A 314 1 14 HELIX 14 14 SER A 325 GLY A 333 1 9 HELIX 15 15 PRO A 338 GLY A 342 5 5 HELIX 16 16 PRO A 408 ALA A 423 1 16 SHEET 1 A 8 GLU A 26 PRO A 28 0 SHEET 2 A 8 GLU A 72 GLY A 80 -1 O SER A 78 N GLY A 27 SHEET 3 A 8 GLY A 62 ARG A 69 -1 N ILE A 67 O TYR A 75 SHEET 4 A 8 LEU A 397 MSE A 402 -1 O MSE A 402 N VAL A 64 SHEET 5 A 8 VAL A 388 ASP A 392 -1 N ASP A 392 O LEU A 397 SHEET 6 A 8 LEU A 379 GLY A 382 -1 N LEU A 379 O ILE A 391 SHEET 7 A 8 ALA A 362 ARG A 364 -1 N ALA A 362 O SER A 380 SHEET 8 A 8 VAL A 355 PHE A 357 -1 N GLY A 356 O VAL A 363 SHEET 1 B 2 PHE A 96 ARG A 97 0 SHEET 2 B 2 VAL A 299 SER A 300 -1 O SER A 300 N PHE A 96 SHEET 1 C 2 LYS A 136 GLY A 143 0 SHEET 2 C 2 GLY A 146 PRO A 153 -1 O ALA A 148 N THR A 141 SHEET 1 D 2 THR A 215 TRP A 216 0 SHEET 2 D 2 VAL A 344 PRO A 345 1 O VAL A 344 N TRP A 216 SHEET 1 E 2 LYS A 276 ILE A 277 0 SHEET 2 E 2 SER A 280 GLU A 281 -1 O SER A 280 N ILE A 277 SHEET 1 F 2 THR A 317 LEU A 318 0 SHEET 2 F 2 LYS A 321 ARG A 322 -1 O LYS A 321 N LEU A 318 LINK C THR A 59 N MSE A 60 1555 1555 1.33 LINK C MSE A 60 N PRO A 61 1555 1555 1.34 LINK C VAL A 64 N MSE A 65 1555 1555 1.33 LINK C MSE A 65 N MSE A 66 1555 1555 1.33 LINK C MSE A 66 N ILE A 67 1555 1555 1.33 LINK C PRO A 89 N MSE A 90 1555 1555 1.33 LINK C MSE A 90 N THR A 91 1555 1555 1.33 LINK C SER A 100 N MSE A 101 1555 1555 1.33 LINK C MSE A 101 N SER A 102 1555 1555 1.33 LINK C ALA A 110 N MSE A 111 1555 1555 1.33 LINK C MSE A 111 N MSE A 112 1555 1555 1.33 LINK C MSE A 112 N LEU A 113 1555 1555 1.33 LINK C GLY A 146 N MSE A 147 1555 1555 1.33 LINK C MSE A 147 N ALA A 148 1555 1555 1.33 LINK C LEU A 163 N MSE A 164 1555 1555 1.33 LINK C MSE A 164 N ARG A 165 1555 1555 1.33 LINK C GLY A 250 N MSE A 251 1555 1555 1.33 LINK C MSE A 251 N LYS A 252 1555 1555 1.33 LINK C ALA A 270 N MSE A 271 1555 1555 1.33 LINK C MSE A 271 N PRO A 272 1555 1555 1.34 LINK C GLU A 281 N MSE A 282 1555 1555 1.33 LINK C MSE A 282 N PHE A 283 1555 1555 1.33 LINK C GLY A 297 N MSE A 298 1555 1555 1.33 LINK C MSE A 298 N VAL A 299 1555 1555 1.33 LINK C GLN A 310 N MSE A 311 1555 1555 1.33 LINK C MSE A 311 N VAL A 312 1555 1555 1.33 LINK C TYR A 331 N MSE A 332 1555 1555 1.33 LINK C MSE A 332 N GLY A 333 1555 1555 1.33 LINK C PHE A 401 N MSE A 402 1555 1555 1.33 LINK C MSE A 402 N ALA A 403 1555 1555 1.33 LINK C PRO A 404 N MSE A 405 1555 1555 1.33 LINK C MSE A 405 N VAL A 406 1555 1555 1.33 SITE 1 AC1 4 LYS A 33 PRO A 34 LYS A 35 GLU A 36 SITE 1 AC2 4 ARG A 409 HOH A 761 HOH A 813 HOH A 928 CRYST1 149.065 149.065 171.131 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006708 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006708 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005843 0.00000