HEADER TRANSFERASE 23-JAN-13 4IW9 TITLE CRYSTAL STRUCTURE OF GLUTATHIONE S-TRANSFERASE MHA_0454 (TARGET EFI- TITLE 2 507015) FROM MANNHEIMIA HAEMOLYTICA, GSH COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE TRANSFERASE; COMPND 3 CHAIN: A, B, C; COMPND 4 EC: 2.5.1.18; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MANNHEIMIA HAEMOLYTICA PHL213; SOURCE 3 ORGANISM_TAXID: 272629; SOURCE 4 GENE: MHA_0454; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSFERASE, GLUTATHIONE, ENZYME FUNCTION INITIATIVE, EFI, STRUCTURAL KEYWDS 2 GENOMICS EXPDTA X-RAY DIFFRACTION AUTHOR Y.PATSKOVSKY,R.TORO,R.BHOSLE,B.HILLERICH,R.D.SEIDEL,E.WASHINGTON, AUTHOR 2 A.SCOTT GLENN,S.CHOWDHURY,B.EVANS,J.HAMMONDS,W.D.ZENCHECK,H.J.IMKER, AUTHOR 3 N.AL OBAIDI,M.STEAD,J.LOVE,J.A.GERLT,R.N.ARMSTRONG,S.C.ALMO,ENZYME AUTHOR 4 FUNCTION INITIATIVE (EFI) REVDAT 2 20-SEP-23 4IW9 1 REMARK SEQADV REVDAT 1 06-FEB-13 4IW9 0 JRNL AUTH Y.PATSKOVSKY,R.TORO,R.BHOSLE,B.HILLERICH,R.D.SEIDEL, JRNL AUTH 2 E.WASHINGTON,A.SCOTT GLENN,S.CHOWDHURY,B.EVANS,J.HAMMONDS, JRNL AUTH 3 W.D.ZENCHECK,H.J.IMKER,N.AL OBAIDI,M.STEAD,J.LOVE,J.A.GERLT, JRNL AUTH 4 R.N.ARMSTRONG,S.C.ALMO,ENZYME FUNCTION INITIATIVE (EFI) JRNL TITL CRYSTAL STRUCTURE OF PROBABLE GLUTATHIONE S-TRANSFERASE JRNL TITL 2 MHA_0454 (TARGET EFI-507015) FROM MANNHEIMIA HAEMOLYTICA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.76 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.76 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.79 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 73684 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.154 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2296 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.76 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.81 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5411 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.73 REMARK 3 BIN R VALUE (WORKING SET) : 0.2310 REMARK 3 BIN FREE R VALUE SET COUNT : 178 REMARK 3 BIN FREE R VALUE : 0.2660 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5015 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 75 REMARK 3 SOLVENT ATOMS : 450 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.70000 REMARK 3 B22 (A**2) : -0.02000 REMARK 3 B33 (A**2) : 0.73000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.138 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.100 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.070 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.829 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5336 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5055 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7232 ; 1.152 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11589 ; 0.761 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 656 ; 5.423 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 268 ;37.248 ;24.179 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 884 ;13.735 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 33 ;21.008 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 784 ; 0.072 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6176 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1331 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 10389 ; 2.629 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 131 ;27.237 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 10592 ;15.271 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4IW9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1000077288. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-NOV-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.075 REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK DOUBLE CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 76059 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 10.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.3 REMARK 200 DATA REDUNDANCY IN SHELL : 10.40 REMARK 200 R MERGE FOR SHELL (I) : 0.93000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4IQ1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.17M AMMONUM ACETATE, 0.085M SODIUM REMARK 280 ACETATE:HCL, PH 4.6, 25.5% PEG4000, 15% GLYCEROL, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 143.87000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 143.87000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 32.97100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 40.76200 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 32.97100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 40.76200 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 143.87000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 32.97100 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 40.76200 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 143.87000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 32.97100 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 40.76200 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 GLY A -12 REMARK 465 VAL A -11 REMARK 465 ASP A -10 REMARK 465 LEU A -9 REMARK 465 GLY A -8 REMARK 465 THR A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 MET B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 SER B -14 REMARK 465 SER B -13 REMARK 465 GLY B -12 REMARK 465 VAL B -11 REMARK 465 ASP B -10 REMARK 465 LEU B -9 REMARK 465 GLY B -8 REMARK 465 THR B -7 REMARK 465 GLU B -6 REMARK 465 MET C -21 REMARK 465 HIS C -20 REMARK 465 HIS C -19 REMARK 465 HIS C -18 REMARK 465 HIS C -17 REMARK 465 HIS C -16 REMARK 465 HIS C -15 REMARK 465 SER C -14 REMARK 465 SER C -13 REMARK 465 GLY C -12 REMARK 465 VAL C -11 REMARK 465 ASP C -10 REMARK 465 LEU C -9 REMARK 465 GLY C -8 REMARK 465 THR C -7 REMARK 465 GLU C -6 REMARK 465 ASN C -5 REMARK 465 LEU C -4 REMARK 465 TYR C -3 REMARK 465 PHE C -2 REMARK 465 LEU C 115 REMARK 465 PRO C 116 REMARK 465 SER C 117 REMARK 465 TYR C 118 REMARK 465 ALA C 119 REMARK 465 GLU C 120 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG C 36 CG CD NE CZ NH1 NH2 REMARK 470 PHE C 113 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG C 114 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 123 CG CD OE1 OE2 REMARK 470 LYS C 127 CG CD CE NZ REMARK 470 ASN C 145 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 65 113.69 81.86 REMARK 500 GLN B 65 117.49 82.21 REMARK 500 ASN B 150 26.15 -142.13 REMARK 500 GLN C 65 109.85 78.09 REMARK 500 ASP C 104 -60.93 -103.72 REMARK 500 GLU C 123 -85.39 -110.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH C 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4IQ1 RELATED DB: PDB REMARK 900 SUBSTRATE FREE REMARK 900 RELATED ID: EFI-507015 RELATED DB: TARGETTRACK DBREF 4IW9 A 1 209 UNP A7JQU5 A7JQU5_PASHA 1 209 DBREF 4IW9 B 1 209 UNP A7JQU5 A7JQU5_PASHA 1 209 DBREF 4IW9 C 1 209 UNP A7JQU5 A7JQU5_PASHA 1 209 SEQADV 4IW9 MET A -21 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 HIS A -20 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 HIS A -19 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 HIS A -18 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 HIS A -17 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 HIS A -16 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 HIS A -15 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 SER A -14 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 SER A -13 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 GLY A -12 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 VAL A -11 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 ASP A -10 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 LEU A -9 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 GLY A -8 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 THR A -7 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 GLU A -6 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 ASN A -5 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 LEU A -4 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 TYR A -3 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 PHE A -2 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 GLN A -1 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 SER A 0 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 MET B -21 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 HIS B -20 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 HIS B -19 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 HIS B -18 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 HIS B -17 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 HIS B -16 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 HIS B -15 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 SER B -14 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 SER B -13 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 GLY B -12 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 VAL B -11 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 ASP B -10 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 LEU B -9 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 GLY B -8 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 THR B -7 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 GLU B -6 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 ASN B -5 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 LEU B -4 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 TYR B -3 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 PHE B -2 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 GLN B -1 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 SER B 0 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 MET C -21 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 HIS C -20 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 HIS C -19 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 HIS C -18 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 HIS C -17 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 HIS C -16 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 HIS C -15 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 SER C -14 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 SER C -13 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 GLY C -12 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 VAL C -11 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 ASP C -10 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 LEU C -9 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 GLY C -8 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 THR C -7 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 GLU C -6 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 ASN C -5 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 LEU C -4 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 TYR C -3 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 PHE C -2 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 GLN C -1 UNP A7JQU5 EXPRESSION TAG SEQADV 4IW9 SER C 0 UNP A7JQU5 EXPRESSION TAG SEQRES 1 A 231 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 231 GLY THR GLU ASN LEU TYR PHE GLN SER MET LYS LEU TYR SEQRES 3 A 231 GLY LEU THR GLY ALA CYS SER PHE VAL PRO HIS VAL ALA SEQRES 4 A 231 LEU GLU TRP VAL LYS LEU ARG ALA ASN GLN ASP TYR ALA SEQRES 5 A 231 PHE GLN ALA VAL SER ARG GLU PHE ILE LYS SER ALA GLU SEQRES 6 A 231 TYR LEU ALA LEU ASN PRO ARG GLY ASN VAL PRO LEU LEU SEQRES 7 A 231 VAL ASP GLY ASP LEU ALA LEU THR GLN ASN GLN ALA ILE SEQRES 8 A 231 VAL HIS TYR LEU ASP GLU LEU TYR PRO GLU ALA LYS LEU SEQRES 9 A 231 PHE GLY SER LYS THR ALA ARG ASP LYS ALA LYS ALA ALA SEQRES 10 A 231 ARG TRP LEU ALA PHE PHE ASN SER ASP VAL HIS LYS SER SEQRES 11 A 231 PHE VAL PRO LEU PHE ARG LEU PRO SER TYR ALA GLU GLY SEQRES 12 A 231 ASN GLU THR LEU THR LYS THR ILE ARG GLN GLN SER ALA SEQRES 13 A 231 GLU GLN ILE LEU GLU GLN LEU ALA PHE ALA ASN ALA HIS SEQRES 14 A 231 LEU GLU ASN HIS ILE PHE PHE GLY GLU GLU ILE SER VAL SEQRES 15 A 231 ALA ASP ALA TYR LEU TYR ILE MET LEU ASN TRP CYS ARG SEQRES 16 A 231 LEU LEU GLY LEU ASP PHE SER HIS LEU SER GLN LEU SER SEQRES 17 A 231 ALA PHE MET GLN ARG VAL GLU ALA ASP GLN GLY VAL ASP SEQRES 18 A 231 ASN VAL ARG GLU GLN GLU GLY LEU LYS GLY SEQRES 1 B 231 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 231 GLY THR GLU ASN LEU TYR PHE GLN SER MET LYS LEU TYR SEQRES 3 B 231 GLY LEU THR GLY ALA CYS SER PHE VAL PRO HIS VAL ALA SEQRES 4 B 231 LEU GLU TRP VAL LYS LEU ARG ALA ASN GLN ASP TYR ALA SEQRES 5 B 231 PHE GLN ALA VAL SER ARG GLU PHE ILE LYS SER ALA GLU SEQRES 6 B 231 TYR LEU ALA LEU ASN PRO ARG GLY ASN VAL PRO LEU LEU SEQRES 7 B 231 VAL ASP GLY ASP LEU ALA LEU THR GLN ASN GLN ALA ILE SEQRES 8 B 231 VAL HIS TYR LEU ASP GLU LEU TYR PRO GLU ALA LYS LEU SEQRES 9 B 231 PHE GLY SER LYS THR ALA ARG ASP LYS ALA LYS ALA ALA SEQRES 10 B 231 ARG TRP LEU ALA PHE PHE ASN SER ASP VAL HIS LYS SER SEQRES 11 B 231 PHE VAL PRO LEU PHE ARG LEU PRO SER TYR ALA GLU GLY SEQRES 12 B 231 ASN GLU THR LEU THR LYS THR ILE ARG GLN GLN SER ALA SEQRES 13 B 231 GLU GLN ILE LEU GLU GLN LEU ALA PHE ALA ASN ALA HIS SEQRES 14 B 231 LEU GLU ASN HIS ILE PHE PHE GLY GLU GLU ILE SER VAL SEQRES 15 B 231 ALA ASP ALA TYR LEU TYR ILE MET LEU ASN TRP CYS ARG SEQRES 16 B 231 LEU LEU GLY LEU ASP PHE SER HIS LEU SER GLN LEU SER SEQRES 17 B 231 ALA PHE MET GLN ARG VAL GLU ALA ASP GLN GLY VAL ASP SEQRES 18 B 231 ASN VAL ARG GLU GLN GLU GLY LEU LYS GLY SEQRES 1 C 231 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 C 231 GLY THR GLU ASN LEU TYR PHE GLN SER MET LYS LEU TYR SEQRES 3 C 231 GLY LEU THR GLY ALA CYS SER PHE VAL PRO HIS VAL ALA SEQRES 4 C 231 LEU GLU TRP VAL LYS LEU ARG ALA ASN GLN ASP TYR ALA SEQRES 5 C 231 PHE GLN ALA VAL SER ARG GLU PHE ILE LYS SER ALA GLU SEQRES 6 C 231 TYR LEU ALA LEU ASN PRO ARG GLY ASN VAL PRO LEU LEU SEQRES 7 C 231 VAL ASP GLY ASP LEU ALA LEU THR GLN ASN GLN ALA ILE SEQRES 8 C 231 VAL HIS TYR LEU ASP GLU LEU TYR PRO GLU ALA LYS LEU SEQRES 9 C 231 PHE GLY SER LYS THR ALA ARG ASP LYS ALA LYS ALA ALA SEQRES 10 C 231 ARG TRP LEU ALA PHE PHE ASN SER ASP VAL HIS LYS SER SEQRES 11 C 231 PHE VAL PRO LEU PHE ARG LEU PRO SER TYR ALA GLU GLY SEQRES 12 C 231 ASN GLU THR LEU THR LYS THR ILE ARG GLN GLN SER ALA SEQRES 13 C 231 GLU GLN ILE LEU GLU GLN LEU ALA PHE ALA ASN ALA HIS SEQRES 14 C 231 LEU GLU ASN HIS ILE PHE PHE GLY GLU GLU ILE SER VAL SEQRES 15 C 231 ALA ASP ALA TYR LEU TYR ILE MET LEU ASN TRP CYS ARG SEQRES 16 C 231 LEU LEU GLY LEU ASP PHE SER HIS LEU SER GLN LEU SER SEQRES 17 C 231 ALA PHE MET GLN ARG VAL GLU ALA ASP GLN GLY VAL ASP SEQRES 18 C 231 ASN VAL ARG GLU GLN GLU GLY LEU LYS GLY HET GSH A 301 40 HET ACT A 302 4 HET PGE A 303 10 HET GSH B 301 40 HET CL B 302 1 HET GSH C 301 20 HETNAM GSH GLUTATHIONE HETNAM ACT ACETATE ION HETNAM PGE TRIETHYLENE GLYCOL HETNAM CL CHLORIDE ION FORMUL 4 GSH 3(C10 H17 N3 O6 S) FORMUL 5 ACT C2 H3 O2 1- FORMUL 6 PGE C6 H14 O4 FORMUL 8 CL CL 1- FORMUL 10 HOH *450(H2 O) HELIX 1 1 SER A 11 ASN A 26 1 16 HELIX 2 2 GLU A 37 LYS A 40 5 4 HELIX 3 3 SER A 41 ASN A 48 1 8 HELIX 4 4 GLN A 65 TYR A 77 1 13 HELIX 5 5 PRO A 78 LYS A 81 5 4 HELIX 6 6 THR A 87 ASP A 104 1 18 HELIX 7 7 ASP A 104 ARG A 114 1 11 HELIX 8 8 PRO A 116 GLU A 120 5 5 HELIX 9 9 ASN A 122 GLU A 149 1 28 HELIX 10 10 SER A 159 GLY A 176 1 18 HELIX 11 11 GLN A 184 ALA A 194 1 11 HELIX 12 12 ASP A 195 GLU A 205 1 11 HELIX 13 13 SER B 11 ASN B 26 1 16 HELIX 14 14 GLU B 37 LYS B 40 5 4 HELIX 15 15 SER B 41 ASN B 48 1 8 HELIX 16 16 GLN B 65 TYR B 77 1 13 HELIX 17 17 PRO B 78 LYS B 81 5 4 HELIX 18 18 THR B 87 ASP B 104 1 18 HELIX 19 19 VAL B 105 SER B 108 5 4 HELIX 20 20 PHE B 109 ARG B 114 1 6 HELIX 21 21 PRO B 116 GLU B 120 5 5 HELIX 22 22 ASN B 122 LEU B 148 1 27 HELIX 23 23 SER B 159 GLY B 176 1 18 HELIX 24 24 SER B 183 ALA B 194 1 12 HELIX 25 25 ASP B 195 GLU B 205 1 11 HELIX 26 26 SER C 11 ASN C 26 1 16 HELIX 27 27 SER C 35 LYS C 40 1 6 HELIX 28 28 SER C 41 ALA C 46 1 6 HELIX 29 29 GLN C 65 TYR C 77 1 13 HELIX 30 30 PRO C 78 LYS C 81 5 4 HELIX 31 31 THR C 87 ASP C 104 1 18 HELIX 32 32 ASP C 104 PHE C 109 1 6 HELIX 33 33 PHE C 109 ARG C 114 1 6 HELIX 34 34 THR C 124 GLU C 149 1 26 HELIX 35 35 SER C 159 LEU C 175 1 17 HELIX 36 36 GLN C 184 ASP C 195 1 12 HELIX 37 37 ASP C 195 GLU C 205 1 11 SHEET 1 A 4 ALA A 30 ALA A 33 0 SHEET 2 A 4 LYS A 2 GLY A 5 1 N LEU A 3 O GLN A 32 SHEET 3 A 4 LEU A 55 ASP A 58 -1 O VAL A 57 N LYS A 2 SHEET 4 A 4 LEU A 61 THR A 64 -1 O LEU A 63 N LEU A 56 SHEET 1 B 4 ALA B 30 ALA B 33 0 SHEET 2 B 4 LYS B 2 GLY B 5 1 N LEU B 3 O GLN B 32 SHEET 3 B 4 LEU B 55 ASP B 58 -1 O LEU B 55 N TYR B 4 SHEET 4 B 4 LEU B 61 THR B 64 -1 O LEU B 63 N LEU B 56 SHEET 1 C 4 TYR C 29 ALA C 33 0 SHEET 2 C 4 MET C 1 GLY C 5 1 N MET C 1 O ALA C 30 SHEET 3 C 4 LEU C 55 ASP C 58 -1 O LEU C 55 N TYR C 4 SHEET 4 C 4 LEU C 61 THR C 64 -1 O LEU C 61 N ASP C 58 CISPEP 1 VAL A 53 PRO A 54 0 -4.79 CISPEP 2 VAL B 53 PRO B 54 0 -1.90 CISPEP 3 VAL C 53 PRO C 54 0 0.61 SITE 1 AC1 19 LEU A 6 ALA A 9 CYS A 10 ARG A 36 SITE 2 AC1 19 ILE A 39 LYS A 40 ASN A 52 VAL A 53 SITE 3 AC1 19 PRO A 54 GLN A 65 ASN A 66 ASN A 102 SITE 4 AC1 19 HIS A 106 HOH A 411 HOH A 528 HOH A 580 SITE 5 AC1 19 HOH A 594 SER B 103 ASP B 104 SITE 1 AC2 7 SER A 103 ASP A 104 LYS A 107 LYS B 107 SITE 2 AC2 7 VAL B 110 GSH B 301 HOH B 408 SITE 1 AC3 8 GLN A 132 GLU A 135 GLN A 136 HIS A 181 SITE 2 AC3 8 HOH A 423 HOH A 444 HOH A 510 HOH A 590 SITE 1 AC4 20 SER A 103 ASP A 104 ACT A 302 LEU B 6 SITE 2 AC4 20 ALA B 9 CYS B 10 ARG B 36 LYS B 40 SITE 3 AC4 20 ASN B 52 VAL B 53 PRO B 54 GLN B 65 SITE 4 AC4 20 ASN B 66 ASN B 102 HIS B 106 HOH B 401 SITE 5 AC4 20 HOH B 407 HOH B 408 HOH B 462 HOH B 594 SITE 1 AC5 3 THR B 64 GLN B 65 HOH B 403 SITE 1 AC6 12 CYS C 10 ILE C 39 ASN C 52 VAL C 53 SITE 2 AC6 12 PRO C 54 GLN C 65 ASN C 66 ASN C 102 SITE 3 AC6 12 SER C 103 ASP C 104 HOH C 416 HOH C 444 CRYST1 65.942 81.524 287.740 90.00 90.00 90.00 C 2 2 21 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015165 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012266 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003475 0.00000