HEADER UNKNOWN FUNCTION 04-FEB-13 4J2G TITLE ATG13 HORMA DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: KLTH0A00704P; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 1-260; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACHANCEA THERMOTOLERANS; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 559295; SOURCE 5 STRAIN: ATCC 56472 / CBS 6340 / NRRL Y-8284; SOURCE 6 GENE: KLTH0A00704G; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS AUTOPHAGY, HORMA, ATG13, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR C.JAO,R.E.STANLEY,M.J.RAGUSA,J.H.HURLEY REVDAT 3 17-APR-13 4J2G 1 JRNL AUTHOR REVDAT 2 03-APR-13 4J2G 1 JRNL REVDAT 1 20-MAR-13 4J2G 0 JRNL AUTH C.C.JAO,M.J.RAGUSA,R.E.STANLEY,J.H.HURLEY JRNL TITL A HORMA DOMAIN IN ATG13 MEDIATES PI 3-KINASE RECRUITMENT IN JRNL TITL 2 AUTOPHAGY. JRNL REF PROC.NATL.ACAD.SCI.USA V. 110 5486 2013 JRNL REFN ISSN 0027-8424 JRNL PMID 23509291 JRNL DOI 10.1073/PNAS.1220306110 REMARK 2 REMARK 2 RESOLUTION. 2.29 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.29 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 57.25 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 27778 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1489 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.29 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.35 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2099 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.86 REMARK 3 BIN R VALUE (WORKING SET) : 0.3100 REMARK 3 BIN FREE R VALUE SET COUNT : 105 REMARK 3 BIN FREE R VALUE : 0.3930 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3146 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 91 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 67.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.66000 REMARK 3 B22 (A**2) : 6.80000 REMARK 3 B33 (A**2) : -3.56000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.40000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.234 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.210 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.170 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.927 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3207 ; 0.017 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4323 ; 2.052 ; 1.995 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 378 ; 6.668 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 133 ;37.529 ;23.383 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 604 ;20.167 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;24.060 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 508 ; 0.131 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2270 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4J2G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-FEB-13. REMARK 100 THE RCSB ID CODE IS RCSB077511. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-MAY-12 REMARK 200 TEMPERATURE (KELVIN) : 200 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : FILTER REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : 2.290 REMARK 200 RESOLUTION RANGE LOW (A) : 84.050 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 12.100 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2MM AMMONIUM SULFATE, 0.1M MES REMARK 280 PH6.5, 20% W/V PEG 8000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 59.32500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.83500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 59.32500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 32.83500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -12 REMARK 465 ALA A -11 REMARK 465 MSE A -10 REMARK 465 GLY A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 ILE A -6 REMARK 465 GLN A -5 REMARK 465 ARG A -4 REMARK 465 PRO A -3 REMARK 465 THR A -2 REMARK 465 SER A -1 REMARK 465 THR A 0 REMARK 465 MSE A 1 REMARK 465 THR A 2 REMARK 465 THR A 3 REMARK 465 GLY A 29 REMARK 465 TRP A 30 REMARK 465 LYS A 31 REMARK 465 GLY A 32 REMARK 465 ALA A 33 REMARK 465 PRO A 34 REMARK 465 ALA A 35 REMARK 465 ALA A 36 REMARK 465 ASP A 37 REMARK 465 GLU A 38 REMARK 465 GLY A 39 REMARK 465 PRO A 40 REMARK 465 PRO A 41 REMARK 465 THR A 42 REMARK 465 THR A 43 REMARK 465 ASN A 44 REMARK 465 SER A 45 REMARK 465 TRP A 46 REMARK 465 PHE A 47 REMARK 465 ASN A 48 REMARK 465 ILE A 49 REMARK 465 GLU A 50 REMARK 465 THR A 51 REMARK 465 PHE A 52 REMARK 465 GLY A 53 REMARK 465 ASP A 54 REMARK 465 THR A 55 REMARK 465 ASN A 125 REMARK 465 GLY A 126 REMARK 465 GLU A 127 REMARK 465 ASP A 128 REMARK 465 SER A 129 REMARK 465 PRO A 130 REMARK 465 SER A 131 REMARK 465 LEU A 132 REMARK 465 GLN A 133 REMARK 465 SER A 134 REMARK 465 SER A 135 REMARK 465 GLY A 136 REMARK 465 SER A 137 REMARK 465 GLU A 138 REMARK 465 ASP A 139 REMARK 465 THR A 140 REMARK 465 ASP A 141 REMARK 465 ASP A 142 REMARK 465 ASN A 143 REMARK 465 GLY A 178 REMARK 465 VAL A 179 REMARK 465 SER A 180 REMARK 465 PRO A 181 REMARK 465 GLU A 182 REMARK 465 ALA A 183 REMARK 465 PRO A 184 REMARK 465 PRO A 185 REMARK 465 GLY A 260 REMARK 465 GLY B -12 REMARK 465 ALA B -11 REMARK 465 MSE B -10 REMARK 465 GLY B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 ILE B -6 REMARK 465 GLN B -5 REMARK 465 ARG B -4 REMARK 465 PRO B -3 REMARK 465 THR B -2 REMARK 465 SER B -1 REMARK 465 THR B 0 REMARK 465 MSE B 1 REMARK 465 GLY B 29 REMARK 465 TRP B 30 REMARK 465 LYS B 31 REMARK 465 GLY B 32 REMARK 465 ALA B 33 REMARK 465 PRO B 34 REMARK 465 ALA B 35 REMARK 465 ALA B 36 REMARK 465 ASP B 37 REMARK 465 GLU B 38 REMARK 465 GLY B 39 REMARK 465 PRO B 40 REMARK 465 PRO B 41 REMARK 465 THR B 42 REMARK 465 THR B 43 REMARK 465 ASN B 44 REMARK 465 SER B 45 REMARK 465 TRP B 46 REMARK 465 PHE B 47 REMARK 465 ASN B 48 REMARK 465 ILE B 49 REMARK 465 GLU B 50 REMARK 465 THR B 51 REMARK 465 PHE B 52 REMARK 465 GLY B 53 REMARK 465 ASP B 54 REMARK 465 THR B 55 REMARK 465 ASP B 68 REMARK 465 GLY B 69 REMARK 465 SER B 70 REMARK 465 GLU B 71 REMARK 465 SER B 72 REMARK 465 LEU B 73 REMARK 465 PRO B 74 REMARK 465 ASN B 125 REMARK 465 GLY B 126 REMARK 465 GLU B 127 REMARK 465 ASP B 128 REMARK 465 SER B 129 REMARK 465 PRO B 130 REMARK 465 SER B 131 REMARK 465 LEU B 132 REMARK 465 GLN B 133 REMARK 465 SER B 134 REMARK 465 SER B 135 REMARK 465 GLY B 136 REMARK 465 SER B 137 REMARK 465 GLU B 138 REMARK 465 ASP B 139 REMARK 465 THR B 140 REMARK 465 ASP B 141 REMARK 465 GLY B 178 REMARK 465 VAL B 179 REMARK 465 SER B 180 REMARK 465 PRO B 181 REMARK 465 GLU B 182 REMARK 465 ALA B 183 REMARK 465 PRO B 184 REMARK 465 PRO B 185 REMARK 465 LYS B 198 REMARK 465 PRO B 199 REMARK 465 ILE B 200 REMARK 465 VAL B 201 REMARK 465 SER B 202 REMARK 465 LYS B 203 REMARK 465 ILE B 220 REMARK 465 ASN B 221 REMARK 465 GLU B 222 REMARK 465 THR B 223 REMARK 465 ASN B 224 REMARK 465 LEU B 225 REMARK 465 GLY B 260 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 424 O HOH A 429 1.63 REMARK 500 NE ARG B 251 O HOH B 438 1.83 REMARK 500 O HOH B 402 O HOH B 433 1.97 REMARK 500 OD1 ASP B 14 O TRP B 64 2.16 REMARK 500 O HOH B 413 O HOH B 431 2.16 REMARK 500 O HOH A 439 O HOH A 446 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 76 CA - CB - CG ANGL. DEV. = 15.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 66 32.75 -98.90 REMARK 500 ILE B 13 -80.17 -38.15 REMARK 500 LYS B 62 -66.72 -21.05 REMARK 500 PRO B 63 7.10 -62.93 REMARK 500 THR B 65 8.66 -56.59 REMARK 500 THR B 66 35.19 -147.84 REMARK 500 ASP B 97 -168.36 -79.41 REMARK 500 VAL B 144 -41.20 -26.16 REMARK 500 LEU B 212 -40.83 63.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 423 DISTANCE = 5.70 ANGSTROMS REMARK 525 HOH A 437 DISTANCE = 6.79 ANGSTROMS REMARK 525 HOH B 409 DISTANCE = 5.20 ANGSTROMS REMARK 525 HOH B 426 DISTANCE = 5.26 ANGSTROMS REMARK 525 HOH B 435 DISTANCE = 6.83 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 301 DBREF 4J2G A 1 260 UNP C5DB94 C5DB94_LACTC 1 260 DBREF 4J2G B 1 260 UNP C5DB94 C5DB94_LACTC 1 260 SEQADV 4J2G GLY A -12 UNP C5DB94 EXPRESSION TAG SEQADV 4J2G ALA A -11 UNP C5DB94 EXPRESSION TAG SEQADV 4J2G MSE A -10 UNP C5DB94 EXPRESSION TAG SEQADV 4J2G GLY A -9 UNP C5DB94 EXPRESSION TAG SEQADV 4J2G SER A -8 UNP C5DB94 EXPRESSION TAG SEQADV 4J2G GLY A -7 UNP C5DB94 EXPRESSION TAG SEQADV 4J2G ILE A -6 UNP C5DB94 EXPRESSION TAG SEQADV 4J2G GLN A -5 UNP C5DB94 EXPRESSION TAG SEQADV 4J2G ARG A -4 UNP C5DB94 EXPRESSION TAG SEQADV 4J2G PRO A -3 UNP C5DB94 EXPRESSION TAG SEQADV 4J2G THR A -2 UNP C5DB94 EXPRESSION TAG SEQADV 4J2G SER A -1 UNP C5DB94 EXPRESSION TAG SEQADV 4J2G THR A 0 UNP C5DB94 EXPRESSION TAG SEQADV 4J2G MSE A 123 UNP C5DB94 LEU 123 ENGINEERED MUTATION SEQADV 4J2G GLY B -12 UNP C5DB94 EXPRESSION TAG SEQADV 4J2G ALA B -11 UNP C5DB94 EXPRESSION TAG SEQADV 4J2G MSE B -10 UNP C5DB94 EXPRESSION TAG SEQADV 4J2G GLY B -9 UNP C5DB94 EXPRESSION TAG SEQADV 4J2G SER B -8 UNP C5DB94 EXPRESSION TAG SEQADV 4J2G GLY B -7 UNP C5DB94 EXPRESSION TAG SEQADV 4J2G ILE B -6 UNP C5DB94 EXPRESSION TAG SEQADV 4J2G GLN B -5 UNP C5DB94 EXPRESSION TAG SEQADV 4J2G ARG B -4 UNP C5DB94 EXPRESSION TAG SEQADV 4J2G PRO B -3 UNP C5DB94 EXPRESSION TAG SEQADV 4J2G THR B -2 UNP C5DB94 EXPRESSION TAG SEQADV 4J2G SER B -1 UNP C5DB94 EXPRESSION TAG SEQADV 4J2G THR B 0 UNP C5DB94 EXPRESSION TAG SEQADV 4J2G MSE B 123 UNP C5DB94 LEU 123 ENGINEERED MUTATION SEQRES 1 A 273 GLY ALA MSE GLY SER GLY ILE GLN ARG PRO THR SER THR SEQRES 2 A 273 MSE THR THR SER LEU ASP LYS GLN LEU TRP GLU LEU ILE SEQRES 3 A 273 ASP ASN PHE PHE LEU LYS ALA ALA LEU LEU ILE CYS HIS SEQRES 4 A 273 SER LYS GLY TRP LYS GLY ALA PRO ALA ALA ASP GLU GLY SEQRES 5 A 273 PRO PRO THR THR ASN SER TRP PHE ASN ILE GLU THR PHE SEQRES 6 A 273 GLY ASP THR LYS LEU GLU ARG GLU LEU LYS PRO TRP THR SEQRES 7 A 273 THR PHE ASP GLY SER GLU SER LEU PRO PRO LEU VAL ILE SEQRES 8 A 273 GLU THR TYR LEU ASP LEU ALA ARG LEU SER PRO SER GLN SEQRES 9 A 273 GLN VAL THR LEU LYS ASP GLN ASP GLY ASN PRO TRP ASN SEQRES 10 A 273 VAL CYS LYS GLY THR LYS LYS SER GLU ILE MSE LEU GLU SEQRES 11 A 273 ARG TRP LEU ILE GLN MSE ASP ASN GLY GLU ASP SER PRO SEQRES 12 A 273 SER LEU GLN SER SER GLY SER GLU ASP THR ASP ASP ASN SEQRES 13 A 273 VAL SER GLU LEU TYR ARG GLN LEU VAL LEU LEU PHE ARG SEQRES 14 A 273 TYR LEU GLU THR LEU VAL GLY LEU LEU PRO ALA SER GLU SEQRES 15 A 273 LEU GLN ALA ARG LEU ILE ARG PRO GLY VAL SER PRO GLU SEQRES 16 A 273 ALA PRO PRO PRO VAL LYS LEU GLY THR ARG ILE LEU ASP SEQRES 17 A 273 GLY SER LYS PRO ILE VAL SER LYS GLY ARG ILE GLY LEU SEQRES 18 A 273 SER LYS SER LEU ILE ALA THR TYR SER ASN VAL ILE ASN SEQRES 19 A 273 GLU THR ASN LEU PRO ALA HIS LEU GLU GLN ARG LYS ILE SEQRES 20 A 273 THR PRO ILE ARG THR LYS PHE GLY SER LEU ARG ILE SER SEQRES 21 A 273 VAL SER TYR ARG LYS ASP CYS ASP PHE HIS VAL ASN GLY SEQRES 1 B 273 GLY ALA MSE GLY SER GLY ILE GLN ARG PRO THR SER THR SEQRES 2 B 273 MSE THR THR SER LEU ASP LYS GLN LEU TRP GLU LEU ILE SEQRES 3 B 273 ASP ASN PHE PHE LEU LYS ALA ALA LEU LEU ILE CYS HIS SEQRES 4 B 273 SER LYS GLY TRP LYS GLY ALA PRO ALA ALA ASP GLU GLY SEQRES 5 B 273 PRO PRO THR THR ASN SER TRP PHE ASN ILE GLU THR PHE SEQRES 6 B 273 GLY ASP THR LYS LEU GLU ARG GLU LEU LYS PRO TRP THR SEQRES 7 B 273 THR PHE ASP GLY SER GLU SER LEU PRO PRO LEU VAL ILE SEQRES 8 B 273 GLU THR TYR LEU ASP LEU ALA ARG LEU SER PRO SER GLN SEQRES 9 B 273 GLN VAL THR LEU LYS ASP GLN ASP GLY ASN PRO TRP ASN SEQRES 10 B 273 VAL CYS LYS GLY THR LYS LYS SER GLU ILE MSE LEU GLU SEQRES 11 B 273 ARG TRP LEU ILE GLN MSE ASP ASN GLY GLU ASP SER PRO SEQRES 12 B 273 SER LEU GLN SER SER GLY SER GLU ASP THR ASP ASP ASN SEQRES 13 B 273 VAL SER GLU LEU TYR ARG GLN LEU VAL LEU LEU PHE ARG SEQRES 14 B 273 TYR LEU GLU THR LEU VAL GLY LEU LEU PRO ALA SER GLU SEQRES 15 B 273 LEU GLN ALA ARG LEU ILE ARG PRO GLY VAL SER PRO GLU SEQRES 16 B 273 ALA PRO PRO PRO VAL LYS LEU GLY THR ARG ILE LEU ASP SEQRES 17 B 273 GLY SER LYS PRO ILE VAL SER LYS GLY ARG ILE GLY LEU SEQRES 18 B 273 SER LYS SER LEU ILE ALA THR TYR SER ASN VAL ILE ASN SEQRES 19 B 273 GLU THR ASN LEU PRO ALA HIS LEU GLU GLN ARG LYS ILE SEQRES 20 B 273 THR PRO ILE ARG THR LYS PHE GLY SER LEU ARG ILE SER SEQRES 21 B 273 VAL SER TYR ARG LYS ASP CYS ASP PHE HIS VAL ASN GLY MODRES 4J2G MSE A 115 MET SELENOMETHIONINE MODRES 4J2G MSE A 123 MET SELENOMETHIONINE MODRES 4J2G MSE B 115 MET SELENOMETHIONINE MODRES 4J2G MSE B 123 MET SELENOMETHIONINE HET MSE A 115 8 HET MSE A 123 8 HET MSE B 115 8 HET MSE B 123 8 HET SO4 A 301 5 HET SO4 B 301 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 HOH *91(H2 O) HELIX 1 1 SER A 4 SER A 27 1 24 HELIX 2 2 LEU A 57 THR A 66 1 10 HELIX 3 3 SER A 145 LEU A 165 1 21 HELIX 4 4 LEU A 165 ILE A 175 1 11 HELIX 5 5 THR B 3 SER B 27 1 25 HELIX 6 6 LEU B 57 LYS B 62 1 6 HELIX 7 7 THR B 109 LYS B 111 5 3 HELIX 8 8 ASN B 143 LEU B 165 1 23 HELIX 9 9 LEU B 165 ARG B 176 1 12 HELIX 10 10 ILE B 213 ASN B 218 5 6 SHEET 1 A 5 LYS A 188 ASP A 195 0 SHEET 2 A 5 LEU A 76 ASP A 83 -1 N ASP A 83 O LYS A 188 SHEET 3 A 5 GLU A 113 MSE A 123 -1 O ILE A 121 N LEU A 76 SHEET 4 A 5 GLY A 242 ARG A 251 -1 O SER A 249 N ARG A 118 SHEET 5 A 5 LEU A 229 LYS A 233 -1 N ARG A 232 O VAL A 248 SHEET 1 B 5 LYS A 188 ASP A 195 0 SHEET 2 B 5 LEU A 76 ASP A 83 -1 N ASP A 83 O LYS A 188 SHEET 3 B 5 GLU A 113 MSE A 123 -1 O ILE A 121 N LEU A 76 SHEET 4 B 5 GLY A 242 ARG A 251 -1 O SER A 249 N ARG A 118 SHEET 5 B 5 ILE A 237 THR A 239 -1 N ILE A 237 O LEU A 244 SHEET 1 C 3 PRO A 102 LYS A 107 0 SHEET 2 C 3 GLN A 92 LYS A 96 -1 N VAL A 93 O CYS A 106 SHEET 3 C 3 ASP A 255 ASN A 259 -1 O HIS A 257 N THR A 94 SHEET 1 D 5 LYS B 188 ASP B 195 0 SHEET 2 D 5 LEU B 76 ASP B 83 -1 N ASP B 83 O LYS B 188 SHEET 3 D 5 GLU B 113 ASP B 124 -1 O ILE B 121 N LEU B 76 SHEET 4 D 5 GLY B 242 ARG B 251 -1 O ARG B 245 N GLN B 122 SHEET 5 D 5 LEU B 229 LYS B 233 -1 N ARG B 232 O VAL B 248 SHEET 1 E 5 LYS B 188 ASP B 195 0 SHEET 2 E 5 LEU B 76 ASP B 83 -1 N ASP B 83 O LYS B 188 SHEET 3 E 5 GLU B 113 ASP B 124 -1 O ILE B 121 N LEU B 76 SHEET 4 E 5 GLY B 242 ARG B 251 -1 O ARG B 245 N GLN B 122 SHEET 5 E 5 ILE B 237 THR B 239 -1 N ILE B 237 O LEU B 244 SHEET 1 F 3 PRO B 102 LYS B 107 0 SHEET 2 F 3 GLN B 92 LYS B 96 -1 N VAL B 93 O CYS B 106 SHEET 3 F 3 PHE B 256 VAL B 258 -1 O HIS B 257 N THR B 94 LINK C ILE A 114 N MSE A 115 1555 1555 1.34 LINK C MSE A 115 N LEU A 116 1555 1555 1.34 LINK C GLN A 122 N MSE A 123 1555 1555 1.33 LINK C MSE A 123 N ASP A 124 1555 1555 1.34 LINK C ILE B 114 N MSE B 115 1555 1555 1.34 LINK C MSE B 115 N LEU B 116 1555 1555 1.32 LINK C GLN B 122 N MSE B 123 1555 1555 1.32 LINK C MSE B 123 N ASP B 124 1555 1555 1.32 SITE 1 AC1 4 ARG A 118 GLY A 207 LEU A 208 SER A 209 SITE 1 AC2 4 ARG B 118 GLY B 207 LEU B 208 SER B 209 CRYST1 118.650 65.670 85.760 90.00 101.46 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008428 0.000000 0.001709 0.00000 SCALE2 0.000000 0.015228 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011898 0.00000