HEADER ISOMERASE/ISOMERASE INHIBITOR 07-FEB-13 4J4N TITLE CRYSTAL STRUCTURE OF FK506 BINDING DOMAIN OF PLASMODIUM FALCIPARUM TITLE 2 FKBP35 IN COMPLEX WITH D44 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FK506-BINDING PROTEIN (FKBP)-TYPE PEPTIDYL-PROPYL COMPND 3 ISOMERASE; COMPND 4 CHAIN: A, B, C; COMPND 5 FRAGMENT: FK506 BINDING DOMAIN, UNP RESIDUES 1-127; COMPND 6 EC: 5.2.1.8; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM; SOURCE 3 ORGANISM_TAXID: 36329; SOURCE 4 STRAIN: 3D7; SOURCE 5 GENE: FKBP35, PFL2275C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETSUMO KEYWDS D44, FKBP35, FK506 BINDING, ISOMERASE-ISOMERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR R.SREEKANTH,A.HARIKISHORE,H.S.YOON REVDAT 2 08-NOV-23 4J4N 1 REMARK SEQADV REVDAT 1 11-SEP-13 4J4N 0 JRNL AUTH A.HARIKISHORE,M.NIANG,S.RAJAN,P.R.PREISER,H.S.YOON JRNL TITL SMALL MOLECULE PLASMODIUM FKBP35 INHIBITOR AS A POTENTIAL JRNL TITL 2 ANTIMALARIA AGENT. JRNL REF SCI REP V. 3 2501 2013 JRNL REFN ESSN 2045-2322 JRNL PMID 23974147 JRNL DOI 10.1038/SREP02501 REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 12002 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.229 REMARK 3 R VALUE (WORKING SET) : 0.227 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 620 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.82 REMARK 3 REFLECTION IN BIN (WORKING SET) : 820 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.77 REMARK 3 BIN R VALUE (WORKING SET) : 0.3630 REMARK 3 BIN FREE R VALUE SET COUNT : 55 REMARK 3 BIN FREE R VALUE : 0.4370 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2873 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 66 REMARK 3 SOLVENT ATOMS : 13 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 77.22 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.36000 REMARK 3 B22 (A**2) : 4.36000 REMARK 3 B33 (A**2) : -8.73000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 2.481 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.386 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.359 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 39.084 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.938 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.919 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2994 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4012 ; 1.456 ; 2.000 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 363 ; 6.527 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 135 ;34.688 ;25.481 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 558 ;16.664 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ; 9.864 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 422 ; 0.086 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2241 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1795 ; 0.360 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2887 ; 0.677 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1199 ; 0.926 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1125 ; 1.556 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7 A 129 REMARK 3 ORIGIN FOR THE GROUP (A): -4.3717 16.8531 -25.6832 REMARK 3 T TENSOR REMARK 3 T11: 0.2454 T22: 0.0378 REMARK 3 T33: 0.1096 T12: 0.0402 REMARK 3 T13: -0.0255 T23: 0.0001 REMARK 3 L TENSOR REMARK 3 L11: 3.8332 L22: 4.8158 REMARK 3 L33: 5.7651 L12: -0.3707 REMARK 3 L13: 0.5515 L23: 1.2859 REMARK 3 S TENSOR REMARK 3 S11: 0.0727 S12: 0.0657 S13: 0.4496 REMARK 3 S21: -0.1050 S22: -0.0880 S23: -0.0735 REMARK 3 S31: -0.7218 S32: 0.1759 S33: 0.0153 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 7 B 128 REMARK 3 ORIGIN FOR THE GROUP (A): -10.2593 -5.2164 -37.3800 REMARK 3 T TENSOR REMARK 3 T11: 0.4036 T22: 0.0343 REMARK 3 T33: 0.0858 T12: 0.0869 REMARK 3 T13: -0.0352 T23: -0.0070 REMARK 3 L TENSOR REMARK 3 L11: 4.9401 L22: 3.3790 REMARK 3 L33: 3.5403 L12: 0.0940 REMARK 3 L13: 0.3735 L23: -0.1358 REMARK 3 S TENSOR REMARK 3 S11: 0.0292 S12: 0.1211 S13: -0.4159 REMARK 3 S21: -0.0093 S22: 0.0737 S23: 0.1778 REMARK 3 S31: 0.7495 S32: 0.0172 S33: -0.1029 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 7 C 127 REMARK 3 ORIGIN FOR THE GROUP (A): 6.6315 -4.1521 -9.8324 REMARK 3 T TENSOR REMARK 3 T11: 0.3009 T22: 0.2211 REMARK 3 T33: 0.1996 T12: 0.1171 REMARK 3 T13: -0.0980 T23: 0.0841 REMARK 3 L TENSOR REMARK 3 L11: 3.1741 L22: 3.9551 REMARK 3 L33: 3.5989 L12: -0.4951 REMARK 3 L13: -0.2409 L23: 1.1935 REMARK 3 S TENSOR REMARK 3 S11: 0.0360 S12: -0.0684 S13: -0.4707 REMARK 3 S21: -0.0873 S22: -0.0748 S23: -0.2342 REMARK 3 S31: 0.3896 S32: 0.2928 S33: 0.0388 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4J4N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-FEB-13. REMARK 100 THE DEPOSITION ID IS D_1000077590. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.75 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9642 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12747 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.3100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : 0.56900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.930 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2VN1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.5M AMMONIUM SULPHATE, 0.1M CITRATE REMARK 280 BUFFER, PH 5.75, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 93.43850 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 34.96350 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 34.96350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 140.15775 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 34.96350 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 34.96350 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 46.71925 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 34.96350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 34.96350 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 140.15775 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 34.96350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 34.96350 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 46.71925 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 93.43850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 THR A 3 REMARK 465 GLU A 4 REMARK 465 GLN A 5 REMARK 465 GLU A 6 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 THR B 3 REMARK 465 GLU B 4 REMARK 465 GLN B 5 REMARK 465 GLU B 6 REMARK 465 GLU B 129 REMARK 465 MET C 1 REMARK 465 THR C 2 REMARK 465 THR C 3 REMARK 465 GLU C 4 REMARK 465 GLN C 5 REMARK 465 GLU C 6 REMARK 465 LEU C 128 REMARK 465 GLU C 129 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG B 86 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 31 -1.03 -57.70 REMARK 500 VAL A 74 -168.76 -114.92 REMARK 500 ASN A 113 72.86 44.73 REMARK 500 GLU A 127 63.95 -100.42 REMARK 500 ALA B 14 14.34 -68.27 REMARK 500 GLU C 8 101.55 -53.95 REMARK 500 GLU C 31 -33.29 -33.92 REMARK 500 LYS C 36 131.19 -35.97 REMARK 500 SER C 97 -37.46 -37.66 REMARK 500 ASN C 113 52.15 39.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE D44 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE D44 B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE D44 C 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2VN1 RELATED DB: PDB REMARK 900 RELATED ID: 2OFN RELATED DB: PDB REMARK 900 RELATED ID: 4J4O RELATED DB: PDB DBREF 4J4N A 1 127 UNP Q8I4V8 Q8I4V8_PLAF7 1 127 DBREF 4J4N B 1 127 UNP Q8I4V8 Q8I4V8_PLAF7 1 127 DBREF 4J4N C 1 127 UNP Q8I4V8 Q8I4V8_PLAF7 1 127 SEQADV 4J4N LEU A 128 UNP Q8I4V8 EXPRESSION TAG SEQADV 4J4N GLU A 129 UNP Q8I4V8 EXPRESSION TAG SEQADV 4J4N LEU B 128 UNP Q8I4V8 EXPRESSION TAG SEQADV 4J4N GLU B 129 UNP Q8I4V8 EXPRESSION TAG SEQADV 4J4N LEU C 128 UNP Q8I4V8 EXPRESSION TAG SEQADV 4J4N GLU C 129 UNP Q8I4V8 EXPRESSION TAG SEQRES 1 A 129 MET THR THR GLU GLN GLU PHE GLU LYS VAL GLU LEU THR SEQRES 2 A 129 ALA ASP GLY GLY VAL ILE LYS THR ILE LEU LYS LYS GLY SEQRES 3 A 129 ASP GLU GLY GLU GLU ASN ILE PRO LYS LYS GLY ASN GLU SEQRES 4 A 129 VAL THR VAL HIS TYR VAL GLY LYS LEU GLU SER THR GLY SEQRES 5 A 129 LYS VAL PHE ASP SER SER PHE ASP ARG ASN VAL PRO PHE SEQRES 6 A 129 LYS PHE HIS LEU GLU GLN GLY GLU VAL ILE LYS GLY TRP SEQRES 7 A 129 ASP ILE CYS VAL SER SER MET ARG LYS ASN GLU LYS CYS SEQRES 8 A 129 LEU VAL ARG ILE GLU SER MET TYR GLY TYR GLY ASP GLU SEQRES 9 A 129 GLY CYS GLY GLU SER ILE PRO GLY ASN SER VAL LEU LEU SEQRES 10 A 129 PHE GLU ILE GLU LEU LEU SER PHE ARG GLU LEU GLU SEQRES 1 B 129 MET THR THR GLU GLN GLU PHE GLU LYS VAL GLU LEU THR SEQRES 2 B 129 ALA ASP GLY GLY VAL ILE LYS THR ILE LEU LYS LYS GLY SEQRES 3 B 129 ASP GLU GLY GLU GLU ASN ILE PRO LYS LYS GLY ASN GLU SEQRES 4 B 129 VAL THR VAL HIS TYR VAL GLY LYS LEU GLU SER THR GLY SEQRES 5 B 129 LYS VAL PHE ASP SER SER PHE ASP ARG ASN VAL PRO PHE SEQRES 6 B 129 LYS PHE HIS LEU GLU GLN GLY GLU VAL ILE LYS GLY TRP SEQRES 7 B 129 ASP ILE CYS VAL SER SER MET ARG LYS ASN GLU LYS CYS SEQRES 8 B 129 LEU VAL ARG ILE GLU SER MET TYR GLY TYR GLY ASP GLU SEQRES 9 B 129 GLY CYS GLY GLU SER ILE PRO GLY ASN SER VAL LEU LEU SEQRES 10 B 129 PHE GLU ILE GLU LEU LEU SER PHE ARG GLU LEU GLU SEQRES 1 C 129 MET THR THR GLU GLN GLU PHE GLU LYS VAL GLU LEU THR SEQRES 2 C 129 ALA ASP GLY GLY VAL ILE LYS THR ILE LEU LYS LYS GLY SEQRES 3 C 129 ASP GLU GLY GLU GLU ASN ILE PRO LYS LYS GLY ASN GLU SEQRES 4 C 129 VAL THR VAL HIS TYR VAL GLY LYS LEU GLU SER THR GLY SEQRES 5 C 129 LYS VAL PHE ASP SER SER PHE ASP ARG ASN VAL PRO PHE SEQRES 6 C 129 LYS PHE HIS LEU GLU GLN GLY GLU VAL ILE LYS GLY TRP SEQRES 7 C 129 ASP ILE CYS VAL SER SER MET ARG LYS ASN GLU LYS CYS SEQRES 8 C 129 LEU VAL ARG ILE GLU SER MET TYR GLY TYR GLY ASP GLU SEQRES 9 C 129 GLY CYS GLY GLU SER ILE PRO GLY ASN SER VAL LEU LEU SEQRES 10 C 129 PHE GLU ILE GLU LEU LEU SER PHE ARG GLU LEU GLU HET D44 A 201 22 HET D44 B 201 22 HET D44 C 201 22 HETNAM D44 N-(2-ETHYLPHENYL)-2-(3H-IMIDAZO[4,5-B]PYRIDIN-2- HETNAM 2 D44 YLSULFANYL)ACETAMIDE FORMUL 4 D44 3(C16 H16 N4 O S) FORMUL 7 HOH *13(H2 O) HELIX 1 1 SER A 58 ASN A 62 1 5 HELIX 2 2 ILE A 75 SER A 83 1 9 HELIX 3 3 SER A 97 GLY A 100 5 4 HELIX 4 4 SER B 58 ASN B 62 1 5 HELIX 5 5 ILE B 75 SER B 83 1 9 HELIX 6 6 SER B 97 GLY B 100 5 4 HELIX 7 7 GLY C 29 ILE C 33 5 5 HELIX 8 8 ILE C 75 MET C 85 1 11 HELIX 9 9 SER C 97 GLY C 100 5 4 HELIX 10 10 CYS C 106 ILE C 110 5 5 SHEET 1 A 6 GLU A 8 GLU A 11 0 SHEET 2 A 6 VAL A 18 LYS A 24 -1 O LYS A 20 N VAL A 10 SHEET 3 A 6 LYS A 90 ILE A 95 -1 O LYS A 90 N LEU A 23 SHEET 4 A 6 LEU A 116 ARG A 126 -1 O LEU A 116 N ILE A 95 SHEET 5 A 6 GLU A 39 LEU A 48 -1 N HIS A 43 O GLU A 121 SHEET 6 A 6 VAL A 54 SER A 57 -1 O ASP A 56 N GLY A 46 SHEET 1 B 6 GLU A 8 GLU A 11 0 SHEET 2 B 6 VAL A 18 LYS A 24 -1 O LYS A 20 N VAL A 10 SHEET 3 B 6 LYS A 90 ILE A 95 -1 O LYS A 90 N LEU A 23 SHEET 4 B 6 LEU A 116 ARG A 126 -1 O LEU A 116 N ILE A 95 SHEET 5 B 6 GLU A 39 LEU A 48 -1 N HIS A 43 O GLU A 121 SHEET 6 B 6 PHE A 65 HIS A 68 -1 O PHE A 67 N VAL A 40 SHEET 1 C 6 LYS B 9 GLU B 11 0 SHEET 2 C 6 VAL B 18 LYS B 24 -1 O LYS B 20 N VAL B 10 SHEET 3 C 6 LYS B 90 ILE B 95 -1 O ARG B 94 N ILE B 19 SHEET 4 C 6 LEU B 116 ARG B 126 -1 O LEU B 116 N ILE B 95 SHEET 5 C 6 GLU B 39 LEU B 48 -1 N LYS B 47 O LEU B 117 SHEET 6 C 6 VAL B 54 SER B 57 -1 O ASP B 56 N GLY B 46 SHEET 1 D 6 LYS B 9 GLU B 11 0 SHEET 2 D 6 VAL B 18 LYS B 24 -1 O LYS B 20 N VAL B 10 SHEET 3 D 6 LYS B 90 ILE B 95 -1 O ARG B 94 N ILE B 19 SHEET 4 D 6 LEU B 116 ARG B 126 -1 O LEU B 116 N ILE B 95 SHEET 5 D 6 GLU B 39 LEU B 48 -1 N LYS B 47 O LEU B 117 SHEET 6 D 6 PHE B 65 HIS B 68 -1 O PHE B 65 N VAL B 42 SHEET 1 E 6 LYS C 9 GLU C 11 0 SHEET 2 E 6 VAL C 18 LYS C 24 -1 O LYS C 20 N VAL C 10 SHEET 3 E 6 LYS C 90 ILE C 95 -1 O LEU C 92 N THR C 21 SHEET 4 E 6 LEU C 116 ARG C 126 -1 O LEU C 116 N ILE C 95 SHEET 5 E 6 GLU C 39 LEU C 48 -1 N LYS C 47 O LEU C 117 SHEET 6 E 6 VAL C 54 SER C 57 -1 O ASP C 56 N GLY C 46 SHEET 1 F 6 LYS C 9 GLU C 11 0 SHEET 2 F 6 VAL C 18 LYS C 24 -1 O LYS C 20 N VAL C 10 SHEET 3 F 6 LYS C 90 ILE C 95 -1 O LEU C 92 N THR C 21 SHEET 4 F 6 LEU C 116 ARG C 126 -1 O LEU C 116 N ILE C 95 SHEET 5 F 6 GLU C 39 LEU C 48 -1 N LYS C 47 O LEU C 117 SHEET 6 F 6 PHE C 65 HIS C 68 -1 O PHE C 65 N VAL C 42 SSBOND 1 CYS A 106 CYS B 106 1555 1555 2.02 SSBOND 2 CYS C 106 CYS C 106 1555 7555 2.53 SITE 1 AC1 11 ASP A 56 PHE A 65 GLU A 73 VAL A 74 SITE 2 AC1 11 ILE A 75 TRP A 78 TYR A 101 CYS A 106 SITE 3 AC1 11 ILE A 110 TYR B 101 D44 B 201 SITE 1 AC2 9 D44 A 201 PHE B 55 ASP B 56 PHE B 65 SITE 2 AC2 9 VAL B 74 ILE B 75 TRP B 78 TYR B 101 SITE 3 AC2 9 ILE B 110 SITE 1 AC3 5 PHE C 55 ASP C 56 GLU C 73 VAL C 74 SITE 2 AC3 5 TYR C 101 CRYST1 69.927 69.927 186.877 90.00 90.00 90.00 P 43 21 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014301 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014301 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005351 0.00000