data_4J5A # _entry.id 4J5A # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4J5A pdb_00004j5a 10.2210/pdb4j5a/pdb RCSB RCSB077613 ? ? WWPDB D_1000077613 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-02-19 2 'Structure model' 1 1 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' struct_ref_seq_dif 5 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_struct_ref_seq_dif.details' 4 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 4J5A _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-02-08 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4J58 . unspecified PDB 4J59 . unspecified PDB 4J5B . unspecified PDB 4J5C . unspecified PDB 4J5D . unspecified PDB 4J5E . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gelin, M.' 1 'Colliandre, L.' 2 'Bessin, Y.' 3 'Guichou, J.F.' 4 # _citation.id primary _citation.title 'Rationnal Design of small-molecule inhibitors of human Cyclophilins and HCV replication.' _citation.journal_abbrev 'to be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Colliandre, L.' 1 ? primary 'Hamed-Belkacem, H.' 2 ? primary 'Gelin, M.' 3 ? primary 'Bessin, Y.' 4 ? primary 'Douguet, D.' 5 ? primary 'Bourguet, W.' 6 ? primary 'Pawlotsky, J.M.' 7 ? primary 'Guichou, J.F.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Peptidyl-prolyl cis-trans isomerase F, mitochondrial' 17652.125 1 5.2.1.8 K175I 'UNP residues 44-207' ? 2 non-polymer syn '1-(4-aminobenzyl)-3-{2-[(2R)-2-(2,5-dimethoxyphenyl)pyrrolidin-1-yl]-2-oxoethyl}urea' 412.482 1 ? ? ? ? 3 non-polymer syn 'DIMETHYL SULFOXIDE' 78.133 1 ? ? ? ? 4 water nat water 18.015 236 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PPIase F, Cyclophilin F, Rotamase F' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGS RFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGSKSGRTSKKIVITDC GQLS ; _entity_poly.pdbx_seq_one_letter_code_can ;GNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGS RFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGSKSGRTSKKIVITDC GQLS ; _entity_poly.pdbx_strand_id X _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '1-(4-aminobenzyl)-3-{2-[(2R)-2-(2,5-dimethoxyphenyl)pyrrolidin-1-yl]-2-oxoethyl}urea' 67Z 3 'DIMETHYL SULFOXIDE' DMS 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ASN n 1 3 PRO n 1 4 LEU n 1 5 VAL n 1 6 TYR n 1 7 LEU n 1 8 ASP n 1 9 VAL n 1 10 ASP n 1 11 ALA n 1 12 ASN n 1 13 GLY n 1 14 LYS n 1 15 PRO n 1 16 LEU n 1 17 GLY n 1 18 ARG n 1 19 VAL n 1 20 VAL n 1 21 LEU n 1 22 GLU n 1 23 LEU n 1 24 LYS n 1 25 ALA n 1 26 ASP n 1 27 VAL n 1 28 VAL n 1 29 PRO n 1 30 LYS n 1 31 THR n 1 32 ALA n 1 33 GLU n 1 34 ASN n 1 35 PHE n 1 36 ARG n 1 37 ALA n 1 38 LEU n 1 39 CYS n 1 40 THR n 1 41 GLY n 1 42 GLU n 1 43 LYS n 1 44 GLY n 1 45 PHE n 1 46 GLY n 1 47 TYR n 1 48 LYS n 1 49 GLY n 1 50 SER n 1 51 THR n 1 52 PHE n 1 53 HIS n 1 54 ARG n 1 55 VAL n 1 56 ILE n 1 57 PRO n 1 58 SER n 1 59 PHE n 1 60 MET n 1 61 CYS n 1 62 GLN n 1 63 ALA n 1 64 GLY n 1 65 ASP n 1 66 PHE n 1 67 THR n 1 68 ASN n 1 69 HIS n 1 70 ASN n 1 71 GLY n 1 72 THR n 1 73 GLY n 1 74 GLY n 1 75 LYS n 1 76 SER n 1 77 ILE n 1 78 TYR n 1 79 GLY n 1 80 SER n 1 81 ARG n 1 82 PHE n 1 83 PRO n 1 84 ASP n 1 85 GLU n 1 86 ASN n 1 87 PHE n 1 88 THR n 1 89 LEU n 1 90 LYS n 1 91 HIS n 1 92 VAL n 1 93 GLY n 1 94 PRO n 1 95 GLY n 1 96 VAL n 1 97 LEU n 1 98 SER n 1 99 MET n 1 100 ALA n 1 101 ASN n 1 102 ALA n 1 103 GLY n 1 104 PRO n 1 105 ASN n 1 106 THR n 1 107 ASN n 1 108 GLY n 1 109 SER n 1 110 GLN n 1 111 PHE n 1 112 PHE n 1 113 ILE n 1 114 CYS n 1 115 THR n 1 116 ILE n 1 117 LYS n 1 118 THR n 1 119 ASP n 1 120 TRP n 1 121 LEU n 1 122 ASP n 1 123 GLY n 1 124 LYS n 1 125 HIS n 1 126 VAL n 1 127 VAL n 1 128 PHE n 1 129 GLY n 1 130 HIS n 1 131 VAL n 1 132 ILE n 1 133 GLU n 1 134 GLY n 1 135 MET n 1 136 ASP n 1 137 VAL n 1 138 VAL n 1 139 LYS n 1 140 LYS n 1 141 ILE n 1 142 GLU n 1 143 SER n 1 144 PHE n 1 145 GLY n 1 146 SER n 1 147 LYS n 1 148 SER n 1 149 GLY n 1 150 ARG n 1 151 THR n 1 152 SER n 1 153 LYS n 1 154 LYS n 1 155 ILE n 1 156 VAL n 1 157 ILE n 1 158 THR n 1 159 ASP n 1 160 CYS n 1 161 GLY n 1 162 GLN n 1 163 LEU n 1 164 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'CYP3, PPIF' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 67Z non-polymer . '1-(4-aminobenzyl)-3-{2-[(2R)-2-(2,5-dimethoxyphenyl)pyrrolidin-1-yl]-2-oxoethyl}urea' ? 'C22 H28 N4 O4' 412.482 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DMS non-polymer . 'DIMETHYL SULFOXIDE' ? 'C2 H6 O S' 78.133 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 44 44 GLY GLY X . n A 1 2 ASN 2 45 45 ASN ASN X . n A 1 3 PRO 3 46 46 PRO PRO X . n A 1 4 LEU 4 47 47 LEU LEU X . n A 1 5 VAL 5 48 48 VAL VAL X . n A 1 6 TYR 6 49 49 TYR TYR X . n A 1 7 LEU 7 50 50 LEU LEU X . n A 1 8 ASP 8 51 51 ASP ASP X . n A 1 9 VAL 9 52 52 VAL VAL X . n A 1 10 ASP 10 53 53 ASP ASP X . n A 1 11 ALA 11 54 54 ALA ALA X . n A 1 12 ASN 12 55 55 ASN ASN X . n A 1 13 GLY 13 56 56 GLY GLY X . n A 1 14 LYS 14 57 57 LYS LYS X . n A 1 15 PRO 15 58 58 PRO PRO X . n A 1 16 LEU 16 59 59 LEU LEU X . n A 1 17 GLY 17 60 60 GLY GLY X . n A 1 18 ARG 18 61 61 ARG ARG X . n A 1 19 VAL 19 62 62 VAL VAL X . n A 1 20 VAL 20 63 63 VAL VAL X . n A 1 21 LEU 21 64 64 LEU LEU X . n A 1 22 GLU 22 65 65 GLU GLU X . n A 1 23 LEU 23 66 66 LEU LEU X . n A 1 24 LYS 24 67 67 LYS LYS X . n A 1 25 ALA 25 68 68 ALA ALA X . n A 1 26 ASP 26 69 69 ASP ASP X . n A 1 27 VAL 27 70 70 VAL VAL X . n A 1 28 VAL 28 71 71 VAL VAL X . n A 1 29 PRO 29 72 72 PRO PRO X . n A 1 30 LYS 30 73 73 LYS LYS X . n A 1 31 THR 31 74 74 THR THR X . n A 1 32 ALA 32 75 75 ALA ALA X . n A 1 33 GLU 33 76 76 GLU GLU X . n A 1 34 ASN 34 77 77 ASN ASN X . n A 1 35 PHE 35 78 78 PHE PHE X . n A 1 36 ARG 36 79 79 ARG ARG X . n A 1 37 ALA 37 80 80 ALA ALA X . n A 1 38 LEU 38 81 81 LEU LEU X . n A 1 39 CYS 39 82 82 CYS CYS X . n A 1 40 THR 40 83 83 THR THR X . n A 1 41 GLY 41 84 84 GLY GLY X . n A 1 42 GLU 42 85 85 GLU GLU X . n A 1 43 LYS 43 86 86 LYS LYS X . n A 1 44 GLY 44 87 87 GLY GLY X . n A 1 45 PHE 45 88 88 PHE PHE X . n A 1 46 GLY 46 89 89 GLY GLY X . n A 1 47 TYR 47 90 90 TYR TYR X . n A 1 48 LYS 48 91 91 LYS LYS X . n A 1 49 GLY 49 92 92 GLY GLY X . n A 1 50 SER 50 93 93 SER SER X . n A 1 51 THR 51 94 94 THR THR X . n A 1 52 PHE 52 95 95 PHE PHE X . n A 1 53 HIS 53 96 96 HIS HIS X . n A 1 54 ARG 54 97 97 ARG ARG X . n A 1 55 VAL 55 98 98 VAL VAL X . n A 1 56 ILE 56 99 99 ILE ILE X . n A 1 57 PRO 57 100 100 PRO PRO X . n A 1 58 SER 58 101 101 SER SER X . n A 1 59 PHE 59 102 102 PHE PHE X . n A 1 60 MET 60 103 103 MET MET X . n A 1 61 CYS 61 104 104 CYS CYS X . n A 1 62 GLN 62 105 105 GLN GLN X . n A 1 63 ALA 63 106 106 ALA ALA X . n A 1 64 GLY 64 107 107 GLY GLY X . n A 1 65 ASP 65 108 108 ASP ASP X . n A 1 66 PHE 66 109 109 PHE PHE X . n A 1 67 THR 67 110 110 THR THR X . n A 1 68 ASN 68 111 111 ASN ASN X . n A 1 69 HIS 69 112 112 HIS HIS X . n A 1 70 ASN 70 113 113 ASN ASN X . n A 1 71 GLY 71 114 114 GLY GLY X . n A 1 72 THR 72 115 115 THR THR X . n A 1 73 GLY 73 116 116 GLY GLY X . n A 1 74 GLY 74 117 117 GLY GLY X . n A 1 75 LYS 75 118 118 LYS LYS X . n A 1 76 SER 76 119 119 SER SER X . n A 1 77 ILE 77 120 120 ILE ILE X . n A 1 78 TYR 78 121 121 TYR TYR X . n A 1 79 GLY 79 122 122 GLY GLY X . n A 1 80 SER 80 123 123 SER SER X . n A 1 81 ARG 81 124 124 ARG ARG X . n A 1 82 PHE 82 125 125 PHE PHE X . n A 1 83 PRO 83 126 126 PRO PRO X . n A 1 84 ASP 84 127 127 ASP ASP X . n A 1 85 GLU 85 128 128 GLU GLU X . n A 1 86 ASN 86 129 129 ASN ASN X . n A 1 87 PHE 87 130 130 PHE PHE X . n A 1 88 THR 88 131 131 THR THR X . n A 1 89 LEU 89 132 132 LEU LEU X . n A 1 90 LYS 90 133 133 LYS LYS X . n A 1 91 HIS 91 134 134 HIS HIS X . n A 1 92 VAL 92 135 135 VAL VAL X . n A 1 93 GLY 93 136 136 GLY GLY X . n A 1 94 PRO 94 137 137 PRO PRO X . n A 1 95 GLY 95 138 138 GLY GLY X . n A 1 96 VAL 96 139 139 VAL VAL X . n A 1 97 LEU 97 140 140 LEU LEU X . n A 1 98 SER 98 141 141 SER SER X . n A 1 99 MET 99 142 142 MET MET X . n A 1 100 ALA 100 143 143 ALA ALA X . n A 1 101 ASN 101 144 144 ASN ASN X . n A 1 102 ALA 102 145 145 ALA ALA X . n A 1 103 GLY 103 146 146 GLY GLY X . n A 1 104 PRO 104 147 147 PRO PRO X . n A 1 105 ASN 105 148 148 ASN ASN X . n A 1 106 THR 106 149 149 THR THR X . n A 1 107 ASN 107 150 150 ASN ASN X . n A 1 108 GLY 108 151 151 GLY GLY X . n A 1 109 SER 109 152 152 SER SER X . n A 1 110 GLN 110 153 153 GLN GLN X . n A 1 111 PHE 111 154 154 PHE PHE X . n A 1 112 PHE 112 155 155 PHE PHE X . n A 1 113 ILE 113 156 156 ILE ILE X . n A 1 114 CYS 114 157 157 CYS CYS X . n A 1 115 THR 115 158 158 THR THR X . n A 1 116 ILE 116 159 159 ILE ILE X . n A 1 117 LYS 117 160 160 LYS LYS X . n A 1 118 THR 118 161 161 THR THR X . n A 1 119 ASP 119 162 162 ASP ASP X . n A 1 120 TRP 120 163 163 TRP TRP X . n A 1 121 LEU 121 164 164 LEU LEU X . n A 1 122 ASP 122 165 165 ASP ASP X . n A 1 123 GLY 123 166 166 GLY GLY X . n A 1 124 LYS 124 167 167 LYS LYS X . n A 1 125 HIS 125 168 168 HIS HIS X . n A 1 126 VAL 126 169 169 VAL VAL X . n A 1 127 VAL 127 170 170 VAL VAL X . n A 1 128 PHE 128 171 171 PHE PHE X . n A 1 129 GLY 129 172 172 GLY GLY X . n A 1 130 HIS 130 173 173 HIS HIS X . n A 1 131 VAL 131 174 174 VAL VAL X . n A 1 132 ILE 132 175 175 ILE ILE X . n A 1 133 GLU 133 176 176 GLU GLU X . n A 1 134 GLY 134 177 177 GLY GLY X . n A 1 135 MET 135 178 178 MET MET X . n A 1 136 ASP 136 179 179 ASP ASP X . n A 1 137 VAL 137 180 180 VAL VAL X . n A 1 138 VAL 138 181 181 VAL VAL X . n A 1 139 LYS 139 182 182 LYS LYS X . n A 1 140 LYS 140 183 183 LYS LYS X . n A 1 141 ILE 141 184 184 ILE ILE X . n A 1 142 GLU 142 185 185 GLU GLU X . n A 1 143 SER 143 186 186 SER SER X . n A 1 144 PHE 144 187 187 PHE PHE X . n A 1 145 GLY 145 188 188 GLY GLY X . n A 1 146 SER 146 189 189 SER SER X . n A 1 147 LYS 147 190 190 LYS LYS X . n A 1 148 SER 148 191 191 SER SER X . n A 1 149 GLY 149 192 192 GLY GLY X . n A 1 150 ARG 150 193 193 ARG ARG X . n A 1 151 THR 151 194 194 THR THR X . n A 1 152 SER 152 195 195 SER SER X . n A 1 153 LYS 153 196 196 LYS LYS X . n A 1 154 LYS 154 197 197 LYS LYS X . n A 1 155 ILE 155 198 198 ILE ILE X . n A 1 156 VAL 156 199 199 VAL VAL X . n A 1 157 ILE 157 200 200 ILE ILE X . n A 1 158 THR 158 201 201 THR THR X . n A 1 159 ASP 159 202 202 ASP ASP X . n A 1 160 CYS 160 203 203 CYS CYS X . n A 1 161 GLY 161 204 204 GLY GLY X . n A 1 162 GLN 162 205 205 GLN GLN X . n A 1 163 LEU 163 206 206 LEU LEU X . n A 1 164 SER 164 207 207 SER SER X . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 67Z 1 301 1 67Z 67Z X . C 3 DMS 1 302 2 DMS DMS X . D 4 HOH 1 401 1 HOH HOH X . D 4 HOH 2 402 2 HOH HOH X . D 4 HOH 3 403 3 HOH HOH X . D 4 HOH 4 404 5 HOH HOH X . D 4 HOH 5 405 6 HOH HOH X . D 4 HOH 6 406 7 HOH HOH X . D 4 HOH 7 407 8 HOH HOH X . D 4 HOH 8 408 11 HOH HOH X . D 4 HOH 9 409 12 HOH HOH X . D 4 HOH 10 410 13 HOH HOH X . D 4 HOH 11 411 16 HOH HOH X . D 4 HOH 12 412 17 HOH HOH X . D 4 HOH 13 413 18 HOH HOH X . D 4 HOH 14 414 19 HOH HOH X . D 4 HOH 15 415 20 HOH HOH X . D 4 HOH 16 416 22 HOH HOH X . D 4 HOH 17 417 23 HOH HOH X . D 4 HOH 18 418 24 HOH HOH X . D 4 HOH 19 419 27 HOH HOH X . D 4 HOH 20 420 28 HOH HOH X . D 4 HOH 21 421 29 HOH HOH X . D 4 HOH 22 422 30 HOH HOH X . D 4 HOH 23 423 31 HOH HOH X . D 4 HOH 24 424 32 HOH HOH X . D 4 HOH 25 425 34 HOH HOH X . D 4 HOH 26 426 35 HOH HOH X . D 4 HOH 27 427 36 HOH HOH X . D 4 HOH 28 428 37 HOH HOH X . D 4 HOH 29 429 38 HOH HOH X . D 4 HOH 30 430 39 HOH HOH X . D 4 HOH 31 431 40 HOH HOH X . D 4 HOH 32 432 41 HOH HOH X . D 4 HOH 33 433 42 HOH HOH X . D 4 HOH 34 434 43 HOH HOH X . D 4 HOH 35 435 44 HOH HOH X . D 4 HOH 36 436 45 HOH HOH X . D 4 HOH 37 437 46 HOH HOH X . D 4 HOH 38 438 47 HOH HOH X . D 4 HOH 39 439 48 HOH HOH X . D 4 HOH 40 440 49 HOH HOH X . D 4 HOH 41 441 50 HOH HOH X . D 4 HOH 42 442 51 HOH HOH X . D 4 HOH 43 443 52 HOH HOH X . D 4 HOH 44 444 53 HOH HOH X . D 4 HOH 45 445 54 HOH HOH X . D 4 HOH 46 446 55 HOH HOH X . D 4 HOH 47 447 56 HOH HOH X . D 4 HOH 48 448 57 HOH HOH X . D 4 HOH 49 449 58 HOH HOH X . D 4 HOH 50 450 59 HOH HOH X . D 4 HOH 51 451 60 HOH HOH X . D 4 HOH 52 452 61 HOH HOH X . D 4 HOH 53 453 62 HOH HOH X . D 4 HOH 54 454 63 HOH HOH X . D 4 HOH 55 455 64 HOH HOH X . D 4 HOH 56 456 65 HOH HOH X . D 4 HOH 57 457 66 HOH HOH X . D 4 HOH 58 458 67 HOH HOH X . D 4 HOH 59 459 69 HOH HOH X . D 4 HOH 60 460 70 HOH HOH X . D 4 HOH 61 461 71 HOH HOH X . D 4 HOH 62 462 72 HOH HOH X . D 4 HOH 63 463 73 HOH HOH X . D 4 HOH 64 464 74 HOH HOH X . D 4 HOH 65 465 75 HOH HOH X . D 4 HOH 66 466 76 HOH HOH X . D 4 HOH 67 467 77 HOH HOH X . D 4 HOH 68 468 78 HOH HOH X . D 4 HOH 69 469 79 HOH HOH X . D 4 HOH 70 470 80 HOH HOH X . D 4 HOH 71 471 81 HOH HOH X . D 4 HOH 72 472 83 HOH HOH X . D 4 HOH 73 473 84 HOH HOH X . D 4 HOH 74 474 85 HOH HOH X . D 4 HOH 75 475 86 HOH HOH X . D 4 HOH 76 476 87 HOH HOH X . D 4 HOH 77 477 89 HOH HOH X . D 4 HOH 78 478 91 HOH HOH X . D 4 HOH 79 479 92 HOH HOH X . D 4 HOH 80 480 94 HOH HOH X . D 4 HOH 81 481 95 HOH HOH X . D 4 HOH 82 482 96 HOH HOH X . D 4 HOH 83 483 97 HOH HOH X . D 4 HOH 84 484 98 HOH HOH X . D 4 HOH 85 485 99 HOH HOH X . D 4 HOH 86 486 101 HOH HOH X . D 4 HOH 87 487 102 HOH HOH X . D 4 HOH 88 488 103 HOH HOH X . D 4 HOH 89 489 105 HOH HOH X . D 4 HOH 90 490 106 HOH HOH X . D 4 HOH 91 491 107 HOH HOH X . D 4 HOH 92 492 108 HOH HOH X . D 4 HOH 93 493 109 HOH HOH X . D 4 HOH 94 494 110 HOH HOH X . D 4 HOH 95 495 111 HOH HOH X . D 4 HOH 96 496 112 HOH HOH X . D 4 HOH 97 497 113 HOH HOH X . D 4 HOH 98 498 114 HOH HOH X . D 4 HOH 99 499 115 HOH HOH X . D 4 HOH 100 500 116 HOH HOH X . D 4 HOH 101 501 117 HOH HOH X . D 4 HOH 102 502 118 HOH HOH X . D 4 HOH 103 503 119 HOH HOH X . D 4 HOH 104 504 120 HOH HOH X . D 4 HOH 105 505 121 HOH HOH X . D 4 HOH 106 506 122 HOH HOH X . D 4 HOH 107 507 123 HOH HOH X . D 4 HOH 108 508 124 HOH HOH X . D 4 HOH 109 509 125 HOH HOH X . D 4 HOH 110 510 126 HOH HOH X . D 4 HOH 111 511 127 HOH HOH X . D 4 HOH 112 512 128 HOH HOH X . D 4 HOH 113 513 129 HOH HOH X . D 4 HOH 114 514 130 HOH HOH X . D 4 HOH 115 515 131 HOH HOH X . D 4 HOH 116 516 132 HOH HOH X . D 4 HOH 117 517 133 HOH HOH X . D 4 HOH 118 518 134 HOH HOH X . D 4 HOH 119 519 136 HOH HOH X . D 4 HOH 120 520 137 HOH HOH X . D 4 HOH 121 521 139 HOH HOH X . D 4 HOH 122 522 140 HOH HOH X . D 4 HOH 123 523 141 HOH HOH X . D 4 HOH 124 524 142 HOH HOH X . D 4 HOH 125 525 143 HOH HOH X . D 4 HOH 126 526 144 HOH HOH X . D 4 HOH 127 527 145 HOH HOH X . D 4 HOH 128 528 146 HOH HOH X . D 4 HOH 129 529 147 HOH HOH X . D 4 HOH 130 530 148 HOH HOH X . D 4 HOH 131 531 149 HOH HOH X . D 4 HOH 132 532 150 HOH HOH X . D 4 HOH 133 533 151 HOH HOH X . D 4 HOH 134 534 152 HOH HOH X . D 4 HOH 135 535 153 HOH HOH X . D 4 HOH 136 536 154 HOH HOH X . D 4 HOH 137 537 155 HOH HOH X . D 4 HOH 138 538 157 HOH HOH X . D 4 HOH 139 539 158 HOH HOH X . D 4 HOH 140 540 159 HOH HOH X . D 4 HOH 141 541 160 HOH HOH X . D 4 HOH 142 542 162 HOH HOH X . D 4 HOH 143 543 163 HOH HOH X . D 4 HOH 144 544 164 HOH HOH X . D 4 HOH 145 545 165 HOH HOH X . D 4 HOH 146 546 166 HOH HOH X . D 4 HOH 147 547 167 HOH HOH X . D 4 HOH 148 548 168 HOH HOH X . D 4 HOH 149 549 169 HOH HOH X . D 4 HOH 150 550 170 HOH HOH X . D 4 HOH 151 551 171 HOH HOH X . D 4 HOH 152 552 172 HOH HOH X . D 4 HOH 153 553 174 HOH HOH X . D 4 HOH 154 554 176 HOH HOH X . D 4 HOH 155 555 178 HOH HOH X . D 4 HOH 156 556 179 HOH HOH X . D 4 HOH 157 557 180 HOH HOH X . D 4 HOH 158 558 185 HOH HOH X . D 4 HOH 159 559 186 HOH HOH X . D 4 HOH 160 560 187 HOH HOH X . D 4 HOH 161 561 188 HOH HOH X . D 4 HOH 162 562 189 HOH HOH X . D 4 HOH 163 563 191 HOH HOH X . D 4 HOH 164 564 192 HOH HOH X . D 4 HOH 165 565 193 HOH HOH X . D 4 HOH 166 566 194 HOH HOH X . D 4 HOH 167 567 195 HOH HOH X . D 4 HOH 168 568 196 HOH HOH X . D 4 HOH 169 569 197 HOH HOH X . D 4 HOH 170 570 198 HOH HOH X . D 4 HOH 171 571 199 HOH HOH X . D 4 HOH 172 572 201 HOH HOH X . D 4 HOH 173 573 202 HOH HOH X . D 4 HOH 174 574 203 HOH HOH X . D 4 HOH 175 575 204 HOH HOH X . D 4 HOH 176 576 205 HOH HOH X . D 4 HOH 177 577 206 HOH HOH X . D 4 HOH 178 578 207 HOH HOH X . D 4 HOH 179 579 208 HOH HOH X . D 4 HOH 180 580 210 HOH HOH X . D 4 HOH 181 581 212 HOH HOH X . D 4 HOH 182 582 216 HOH HOH X . D 4 HOH 183 583 218 HOH HOH X . D 4 HOH 184 584 220 HOH HOH X . D 4 HOH 185 585 227 HOH HOH X . D 4 HOH 186 586 229 HOH HOH X . D 4 HOH 187 587 231 HOH HOH X . D 4 HOH 188 588 233 HOH HOH X . D 4 HOH 189 589 236 HOH HOH X . D 4 HOH 190 590 237 HOH HOH X . D 4 HOH 191 591 238 HOH HOH X . D 4 HOH 192 592 240 HOH HOH X . D 4 HOH 193 593 241 HOH HOH X . D 4 HOH 194 594 242 HOH HOH X . D 4 HOH 195 595 243 HOH HOH X . D 4 HOH 196 596 244 HOH HOH X . D 4 HOH 197 597 245 HOH HOH X . D 4 HOH 198 598 246 HOH HOH X . D 4 HOH 199 599 248 HOH HOH X . D 4 HOH 200 600 249 HOH HOH X . D 4 HOH 201 601 250 HOH HOH X . D 4 HOH 202 602 251 HOH HOH X . D 4 HOH 203 603 253 HOH HOH X . D 4 HOH 204 604 255 HOH HOH X . D 4 HOH 205 605 256 HOH HOH X . D 4 HOH 206 606 257 HOH HOH X . D 4 HOH 207 607 258 HOH HOH X . D 4 HOH 208 608 259 HOH HOH X . D 4 HOH 209 609 260 HOH HOH X . D 4 HOH 210 610 261 HOH HOH X . D 4 HOH 211 611 262 HOH HOH X . D 4 HOH 212 612 263 HOH HOH X . D 4 HOH 213 613 264 HOH HOH X . D 4 HOH 214 614 265 HOH HOH X . D 4 HOH 215 615 266 HOH HOH X . D 4 HOH 216 616 267 HOH HOH X . D 4 HOH 217 617 268 HOH HOH X . D 4 HOH 218 618 269 HOH HOH X . D 4 HOH 219 619 270 HOH HOH X . D 4 HOH 220 620 271 HOH HOH X . D 4 HOH 221 621 272 HOH HOH X . D 4 HOH 222 622 273 HOH HOH X . D 4 HOH 223 623 274 HOH HOH X . D 4 HOH 224 624 275 HOH HOH X . D 4 HOH 225 625 276 HOH HOH X . D 4 HOH 226 626 277 HOH HOH X . D 4 HOH 227 627 278 HOH HOH X . D 4 HOH 228 628 279 HOH HOH X . D 4 HOH 229 629 280 HOH HOH X . D 4 HOH 230 630 281 HOH HOH X . D 4 HOH 231 631 282 HOH HOH X . D 4 HOH 232 632 283 HOH HOH X . D 4 HOH 233 633 284 HOH HOH X . D 4 HOH 234 634 285 HOH HOH X . D 4 HOH 235 635 286 HOH HOH X . D 4 HOH 236 636 287 HOH HOH X . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MOSFLM . ? package 'Andrew G.W. Leslie' andrew@mrc-lmb.cam.ac.uk 'data reduction' http://www.mrc-lmb.cam.ac.uk/harry/mosflm/ ? ? 2 SCALA 3.2.19 22/12/2005 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 3 PHENIX 1.8_1069 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 4 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 ADSC Quantum ? ? ? ? 'data collection' ? ? ? # _cell.entry_id 4J5A _cell.length_a 57.090 _cell.length_b 57.090 _cell.length_c 88.070 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4J5A _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4J5A _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.03 _exptl_crystal.density_percent_sol 39.49 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.3 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '30% PEG4000, pH 7.3, vapor diffusion, hanging drop, temperature 291.0K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2010-04-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Asymmetric Laue 001' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97950 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-4' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-4 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97950 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4J5A _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 36.697 _reflns.d_resolution_high 1.580 _reflns.number_obs 20616 _reflns.number_all 20616 _reflns.percent_possible_obs 99.800 _reflns.pdbx_Rmerge_I_obs 0.067 _reflns.pdbx_Rsym_value 0.067 _reflns.pdbx_netI_over_sigmaI 11.200 _reflns.B_iso_Wilson_estimate 12.9 _reflns.pdbx_redundancy 6.600 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared 1 1 1.580 1.670 99.000 0.508 0.508 1.500 6.500 ? ? ? ? ? ? 1 2 1.670 1.770 99.700 0.340 0.340 2.300 6.600 ? ? ? ? ? ? 1 3 1.770 1.890 99.800 0.198 0.198 3.900 6.600 ? ? ? ? ? ? 1 4 1.890 2.040 99.900 0.115 0.115 6.600 6.600 ? ? ? ? ? ? 1 5 2.040 2.230 100.000 0.075 0.075 9.500 6.500 ? ? ? ? ? ? 1 6 2.230 2.500 100.000 0.059 0.059 12.000 6.700 ? ? ? ? ? ? 1 7 2.500 2.880 100.000 0.049 0.049 13.200 6.700 ? ? ? ? ? ? 1 8 2.880 3.530 100.000 0.037 0.037 15.800 6.100 ? ? ? ? ? ? 1 9 3.530 5.000 100.000 0.028 0.028 21.100 6.600 ? ? ? ? ? ? 1 10 5.000 36.697 99.800 0.025 0.025 20.000 7.000 ? ? ? ? ? ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4J5A _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 20616 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.15 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 36.697 _refine.ls_d_res_high 1.580 _refine.ls_percent_reflns_obs 98.17 _refine.ls_R_factor_obs 0.1440 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1416 _refine.ls_R_factor_R_free 0.1904 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.01 _refine.ls_number_reflns_R_free 1025 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 0.230 _refine.occupancy_max 1.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 13.0722 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'Isomorphous Replacement' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.17 _refine.pdbx_overall_phase_error 17.97 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1240 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 236 _refine_hist.number_atoms_total 1510 _refine_hist.d_res_high 1.580 _refine_hist.d_res_low 36.697 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.005 ? ? 1346 'X-RAY DIFFRACTION' ? f_angle_d 1.150 ? ? 1821 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 11.330 ? ? 504 'X-RAY DIFFRACTION' ? f_chiral_restr 0.070 ? ? 195 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 236 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 1.58 1.6228 2650 0.2403 96.00 0.2783 . . 153 . . . . 'X-RAY DIFFRACTION' . 1.6228 1.6706 2720 0.2127 97.00 0.2639 . . 127 . . . . 'X-RAY DIFFRACTION' . 1.6706 1.7245 2705 0.2012 97.00 0.2674 . . 152 . . . . 'X-RAY DIFFRACTION' . 1.7245 1.7861 2694 0.1798 98.00 0.2233 . . 159 . . . . 'X-RAY DIFFRACTION' . 1.7861 1.8576 2720 0.1567 98.00 0.2615 . . 145 . . . . 'X-RAY DIFFRACTION' . 1.8576 1.9422 2743 0.1430 98.00 0.1890 . . 134 . . . . 'X-RAY DIFFRACTION' . 1.9422 2.0446 2735 0.1262 99.00 0.2332 . . 165 . . . . 'X-RAY DIFFRACTION' . 2.0446 2.1726 2750 0.1179 99.00 0.1719 . . 149 . . . . 'X-RAY DIFFRACTION' . 2.1726 2.3404 2774 0.1148 99.00 0.1821 . . 130 . . . . 'X-RAY DIFFRACTION' . 2.3404 2.5758 2804 0.1351 99.00 0.1696 . . 123 . . . . 'X-RAY DIFFRACTION' . 2.5758 2.9484 2715 0.1384 99.00 0.1898 . . 160 . . . . 'X-RAY DIFFRACTION' . 2.9484 3.7141 2731 0.1242 98.00 0.1515 . . 137 . . . . 'X-RAY DIFFRACTION' . 3.7141 36.7071 2789 0.1333 99.00 0.1459 . . 140 . . . . # _struct.entry_id 4J5A _struct.title 'Human Cyclophilin D Complexed with an Inhibitor' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4J5A _struct_keywords.text 'Isomerase-Isomerase Inhibitor complex' _struct_keywords.pdbx_keywords 'Isomerase/Isomerase Inhibitor' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PPIF_HUMAN _struct_ref.pdbx_db_accession P30405 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGS RFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDC GQLS ; _struct_ref.pdbx_align_begin 44 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4J5A _struct_ref_seq.pdbx_strand_id X _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 164 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P30405 _struct_ref_seq.db_align_beg 44 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 207 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 44 _struct_ref_seq.pdbx_auth_seq_align_end 207 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4J5A _struct_ref_seq_dif.mon_id ILE _struct_ref_seq_dif.pdbx_pdb_strand_id X _struct_ref_seq_dif.seq_num 132 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P30405 _struct_ref_seq_dif.db_mon_id LYS _struct_ref_seq_dif.pdbx_seq_db_seq_num 175 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 175 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 VAL A 28 ? GLY A 41 ? VAL X 71 GLY X 84 1 ? 14 HELX_P HELX_P2 2 THR A 118 ? ASP A 122 ? THR X 161 ASP X 165 5 ? 5 HELX_P HELX_P3 3 GLY A 134 ? PHE A 144 ? GLY X 177 PHE X 187 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 52 ? ILE A 56 ? PHE X 95 ILE X 99 A 2 MET A 60 ? ALA A 63 ? MET X 103 ALA X 106 A 3 PHE A 111 ? CYS A 114 ? PHE X 154 CYS X 157 A 4 VAL A 96 ? MET A 99 ? VAL X 139 MET X 142 A 5 VAL A 127 ? GLU A 133 ? VAL X 170 GLU X 176 A 6 LYS A 14 ? LEU A 23 ? LYS X 57 LEU X 66 A 7 LEU A 4 ? ALA A 11 ? LEU X 47 ALA X 54 A 8 ILE A 155 ? GLN A 162 ? ILE X 198 GLN X 205 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 54 ? N ARG X 97 O GLN A 62 ? O GLN X 105 A 2 3 N ALA A 63 ? N ALA X 106 O PHE A 111 ? O PHE X 154 A 3 4 O PHE A 112 ? O PHE X 155 N SER A 98 ? N SER X 141 A 4 5 N LEU A 97 ? N LEU X 140 O GLY A 129 ? O GLY X 172 A 5 6 O ILE A 132 ? O ILE X 175 N VAL A 20 ? N VAL X 63 A 6 7 O LEU A 16 ? O LEU X 59 N VAL A 9 ? N VAL X 52 A 7 8 N ASP A 8 ? N ASP X 51 O ASP A 159 ? O ASP X 202 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software X 67Z 301 ? 17 'BINDING SITE FOR RESIDUE 67Z X 301' AC2 Software X DMS 302 ? 5 'BINDING SITE FOR RESIDUE DMS X 302' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 17 ARG A 54 ? ARG X 97 . ? 1_555 ? 2 AC1 17 PHE A 59 ? PHE X 102 . ? 1_555 ? 3 AC1 17 MET A 60 ? MET X 103 . ? 1_555 ? 4 AC1 17 GLN A 62 ? GLN X 105 . ? 1_555 ? 5 AC1 17 GLY A 71 ? GLY X 114 . ? 1_555 ? 6 AC1 17 ARG A 81 ? ARG X 124 . ? 1_555 ? 7 AC1 17 ALA A 100 ? ALA X 143 . ? 1_555 ? 8 AC1 17 ASN A 101 ? ASN X 144 . ? 1_555 ? 9 AC1 17 THR A 106 ? THR X 149 . ? 1_555 ? 10 AC1 17 GLY A 108 ? GLY X 151 . ? 1_555 ? 11 AC1 17 GLN A 110 ? GLN X 153 . ? 1_555 ? 12 AC1 17 PHE A 112 ? PHE X 155 . ? 1_555 ? 13 AC1 17 LEU A 121 ? LEU X 164 . ? 1_555 ? 14 AC1 17 HIS A 125 ? HIS X 168 . ? 1_555 ? 15 AC1 17 HOH D . ? HOH X 469 . ? 1_555 ? 16 AC1 17 HOH D . ? HOH X 486 . ? 1_555 ? 17 AC1 17 HOH D . ? HOH X 525 . ? 1_555 ? 18 AC2 5 VAL A 131 ? VAL X 174 . ? 1_555 ? 19 AC2 5 ILE A 132 ? ILE X 175 . ? 1_555 ? 20 AC2 5 GLU A 133 ? GLU X 176 . ? 1_555 ? 21 AC2 5 GLY A 134 ? GLY X 177 . ? 1_555 ? 22 AC2 5 MET A 135 ? MET X 178 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OD1 X ASP 202 ? B O X HOH 458 ? ? 2.06 2 1 OD2 X ASP 53 ? B O X HOH 566 ? ? 2.09 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE X 102 ? ? -144.64 -82.35 2 1 ASN X 113 ? ? -157.98 2.16 3 1 THR X 161 ? ? -112.37 66.08 4 1 PHE X 171 ? ? -140.81 10.08 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id X _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 595 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 67Z CAB C N N 1 67Z OAU O N N 2 67Z CBA C Y N 3 67Z CAK C Y N 4 67Z CAJ C Y N 5 67Z CAZ C Y N 6 67Z OAT O N N 7 67Z CAA C N N 8 67Z CAL C Y N 9 67Z CBB C Y N 10 67Z CBC C N R 11 67Z CAP C N N 12 67Z CAM C N N 13 67Z CAQ C N N 14 67Z NBD N N N 15 67Z C C N N 16 67Z O O N N 17 67Z CA C N N 18 67Z N N N N 19 67Z CAV C N N 20 67Z OAD O N N 21 67Z NAS N N N 22 67Z CAO C N N 23 67Z CAY C Y N 24 67Z CAH C Y N 25 67Z CAF C Y N 26 67Z CAX C Y N 27 67Z NAC N N N 28 67Z CAG C Y N 29 67Z CAI C Y N 30 67Z H1 H N N 31 67Z H2 H N N 32 67Z H3 H N N 33 67Z H4 H N N 34 67Z H5 H N N 35 67Z H6 H N N 36 67Z H7 H N N 37 67Z H8 H N N 38 67Z H9 H N N 39 67Z H10 H N N 40 67Z H11 H N N 41 67Z H12 H N N 42 67Z H13 H N N 43 67Z H14 H N N 44 67Z H15 H N N 45 67Z H16 H N N 46 67Z H17 H N N 47 67Z H18 H N N 48 67Z H19 H N N 49 67Z H20 H N N 50 67Z H21 H N N 51 67Z H22 H N N 52 67Z H23 H N N 53 67Z H24 H N N 54 67Z H25 H N N 55 67Z H26 H N N 56 67Z H27 H N N 57 67Z H28 H N N 58 ALA N N N N 59 ALA CA C N S 60 ALA C C N N 61 ALA O O N N 62 ALA CB C N N 63 ALA OXT O N N 64 ALA H H N N 65 ALA H2 H N N 66 ALA HA H N N 67 ALA HB1 H N N 68 ALA HB2 H N N 69 ALA HB3 H N N 70 ALA HXT H N N 71 ARG N N N N 72 ARG CA C N S 73 ARG C C N N 74 ARG O O N N 75 ARG CB C N N 76 ARG CG C N N 77 ARG CD C N N 78 ARG NE N N N 79 ARG CZ C N N 80 ARG NH1 N N N 81 ARG NH2 N N N 82 ARG OXT O N N 83 ARG H H N N 84 ARG H2 H N N 85 ARG HA H N N 86 ARG HB2 H N N 87 ARG HB3 H N N 88 ARG HG2 H N N 89 ARG HG3 H N N 90 ARG HD2 H N N 91 ARG HD3 H N N 92 ARG HE H N N 93 ARG HH11 H N N 94 ARG HH12 H N N 95 ARG HH21 H N N 96 ARG HH22 H N N 97 ARG HXT H N N 98 ASN N N N N 99 ASN CA C N S 100 ASN C C N N 101 ASN O O N N 102 ASN CB C N N 103 ASN CG C N N 104 ASN OD1 O N N 105 ASN ND2 N N N 106 ASN OXT O N N 107 ASN H H N N 108 ASN H2 H N N 109 ASN HA H N N 110 ASN HB2 H N N 111 ASN HB3 H N N 112 ASN HD21 H N N 113 ASN HD22 H N N 114 ASN HXT H N N 115 ASP N N N N 116 ASP CA C N S 117 ASP C C N N 118 ASP O O N N 119 ASP CB C N N 120 ASP CG C N N 121 ASP OD1 O N N 122 ASP OD2 O N N 123 ASP OXT O N N 124 ASP H H N N 125 ASP H2 H N N 126 ASP HA H N N 127 ASP HB2 H N N 128 ASP HB3 H N N 129 ASP HD2 H N N 130 ASP HXT H N N 131 CYS N N N N 132 CYS CA C N R 133 CYS C C N N 134 CYS O O N N 135 CYS CB C N N 136 CYS SG S N N 137 CYS OXT O N N 138 CYS H H N N 139 CYS H2 H N N 140 CYS HA H N N 141 CYS HB2 H N N 142 CYS HB3 H N N 143 CYS HG H N N 144 CYS HXT H N N 145 DMS S S N N 146 DMS O O N N 147 DMS C1 C N N 148 DMS C2 C N N 149 DMS H11 H N N 150 DMS H12 H N N 151 DMS H13 H N N 152 DMS H21 H N N 153 DMS H22 H N N 154 DMS H23 H N N 155 GLN N N N N 156 GLN CA C N S 157 GLN C C N N 158 GLN O O N N 159 GLN CB C N N 160 GLN CG C N N 161 GLN CD C N N 162 GLN OE1 O N N 163 GLN NE2 N N N 164 GLN OXT O N N 165 GLN H H N N 166 GLN H2 H N N 167 GLN HA H N N 168 GLN HB2 H N N 169 GLN HB3 H N N 170 GLN HG2 H N N 171 GLN HG3 H N N 172 GLN HE21 H N N 173 GLN HE22 H N N 174 GLN HXT H N N 175 GLU N N N N 176 GLU CA C N S 177 GLU C C N N 178 GLU O O N N 179 GLU CB C N N 180 GLU CG C N N 181 GLU CD C N N 182 GLU OE1 O N N 183 GLU OE2 O N N 184 GLU OXT O N N 185 GLU H H N N 186 GLU H2 H N N 187 GLU HA H N N 188 GLU HB2 H N N 189 GLU HB3 H N N 190 GLU HG2 H N N 191 GLU HG3 H N N 192 GLU HE2 H N N 193 GLU HXT H N N 194 GLY N N N N 195 GLY CA C N N 196 GLY C C N N 197 GLY O O N N 198 GLY OXT O N N 199 GLY H H N N 200 GLY H2 H N N 201 GLY HA2 H N N 202 GLY HA3 H N N 203 GLY HXT H N N 204 HIS N N N N 205 HIS CA C N S 206 HIS C C N N 207 HIS O O N N 208 HIS CB C N N 209 HIS CG C Y N 210 HIS ND1 N Y N 211 HIS CD2 C Y N 212 HIS CE1 C Y N 213 HIS NE2 N Y N 214 HIS OXT O N N 215 HIS H H N N 216 HIS H2 H N N 217 HIS HA H N N 218 HIS HB2 H N N 219 HIS HB3 H N N 220 HIS HD1 H N N 221 HIS HD2 H N N 222 HIS HE1 H N N 223 HIS HE2 H N N 224 HIS HXT H N N 225 HOH O O N N 226 HOH H1 H N N 227 HOH H2 H N N 228 ILE N N N N 229 ILE CA C N S 230 ILE C C N N 231 ILE O O N N 232 ILE CB C N S 233 ILE CG1 C N N 234 ILE CG2 C N N 235 ILE CD1 C N N 236 ILE OXT O N N 237 ILE H H N N 238 ILE H2 H N N 239 ILE HA H N N 240 ILE HB H N N 241 ILE HG12 H N N 242 ILE HG13 H N N 243 ILE HG21 H N N 244 ILE HG22 H N N 245 ILE HG23 H N N 246 ILE HD11 H N N 247 ILE HD12 H N N 248 ILE HD13 H N N 249 ILE HXT H N N 250 LEU N N N N 251 LEU CA C N S 252 LEU C C N N 253 LEU O O N N 254 LEU CB C N N 255 LEU CG C N N 256 LEU CD1 C N N 257 LEU CD2 C N N 258 LEU OXT O N N 259 LEU H H N N 260 LEU H2 H N N 261 LEU HA H N N 262 LEU HB2 H N N 263 LEU HB3 H N N 264 LEU HG H N N 265 LEU HD11 H N N 266 LEU HD12 H N N 267 LEU HD13 H N N 268 LEU HD21 H N N 269 LEU HD22 H N N 270 LEU HD23 H N N 271 LEU HXT H N N 272 LYS N N N N 273 LYS CA C N S 274 LYS C C N N 275 LYS O O N N 276 LYS CB C N N 277 LYS CG C N N 278 LYS CD C N N 279 LYS CE C N N 280 LYS NZ N N N 281 LYS OXT O N N 282 LYS H H N N 283 LYS H2 H N N 284 LYS HA H N N 285 LYS HB2 H N N 286 LYS HB3 H N N 287 LYS HG2 H N N 288 LYS HG3 H N N 289 LYS HD2 H N N 290 LYS HD3 H N N 291 LYS HE2 H N N 292 LYS HE3 H N N 293 LYS HZ1 H N N 294 LYS HZ2 H N N 295 LYS HZ3 H N N 296 LYS HXT H N N 297 MET N N N N 298 MET CA C N S 299 MET C C N N 300 MET O O N N 301 MET CB C N N 302 MET CG C N N 303 MET SD S N N 304 MET CE C N N 305 MET OXT O N N 306 MET H H N N 307 MET H2 H N N 308 MET HA H N N 309 MET HB2 H N N 310 MET HB3 H N N 311 MET HG2 H N N 312 MET HG3 H N N 313 MET HE1 H N N 314 MET HE2 H N N 315 MET HE3 H N N 316 MET HXT H N N 317 PHE N N N N 318 PHE CA C N S 319 PHE C C N N 320 PHE O O N N 321 PHE CB C N N 322 PHE CG C Y N 323 PHE CD1 C Y N 324 PHE CD2 C Y N 325 PHE CE1 C Y N 326 PHE CE2 C Y N 327 PHE CZ C Y N 328 PHE OXT O N N 329 PHE H H N N 330 PHE H2 H N N 331 PHE HA H N N 332 PHE HB2 H N N 333 PHE HB3 H N N 334 PHE HD1 H N N 335 PHE HD2 H N N 336 PHE HE1 H N N 337 PHE HE2 H N N 338 PHE HZ H N N 339 PHE HXT H N N 340 PRO N N N N 341 PRO CA C N S 342 PRO C C N N 343 PRO O O N N 344 PRO CB C N N 345 PRO CG C N N 346 PRO CD C N N 347 PRO OXT O N N 348 PRO H H N N 349 PRO HA H N N 350 PRO HB2 H N N 351 PRO HB3 H N N 352 PRO HG2 H N N 353 PRO HG3 H N N 354 PRO HD2 H N N 355 PRO HD3 H N N 356 PRO HXT H N N 357 SER N N N N 358 SER CA C N S 359 SER C C N N 360 SER O O N N 361 SER CB C N N 362 SER OG O N N 363 SER OXT O N N 364 SER H H N N 365 SER H2 H N N 366 SER HA H N N 367 SER HB2 H N N 368 SER HB3 H N N 369 SER HG H N N 370 SER HXT H N N 371 THR N N N N 372 THR CA C N S 373 THR C C N N 374 THR O O N N 375 THR CB C N R 376 THR OG1 O N N 377 THR CG2 C N N 378 THR OXT O N N 379 THR H H N N 380 THR H2 H N N 381 THR HA H N N 382 THR HB H N N 383 THR HG1 H N N 384 THR HG21 H N N 385 THR HG22 H N N 386 THR HG23 H N N 387 THR HXT H N N 388 TRP N N N N 389 TRP CA C N S 390 TRP C C N N 391 TRP O O N N 392 TRP CB C N N 393 TRP CG C Y N 394 TRP CD1 C Y N 395 TRP CD2 C Y N 396 TRP NE1 N Y N 397 TRP CE2 C Y N 398 TRP CE3 C Y N 399 TRP CZ2 C Y N 400 TRP CZ3 C Y N 401 TRP CH2 C Y N 402 TRP OXT O N N 403 TRP H H N N 404 TRP H2 H N N 405 TRP HA H N N 406 TRP HB2 H N N 407 TRP HB3 H N N 408 TRP HD1 H N N 409 TRP HE1 H N N 410 TRP HE3 H N N 411 TRP HZ2 H N N 412 TRP HZ3 H N N 413 TRP HH2 H N N 414 TRP HXT H N N 415 TYR N N N N 416 TYR CA C N S 417 TYR C C N N 418 TYR O O N N 419 TYR CB C N N 420 TYR CG C Y N 421 TYR CD1 C Y N 422 TYR CD2 C Y N 423 TYR CE1 C Y N 424 TYR CE2 C Y N 425 TYR CZ C Y N 426 TYR OH O N N 427 TYR OXT O N N 428 TYR H H N N 429 TYR H2 H N N 430 TYR HA H N N 431 TYR HB2 H N N 432 TYR HB3 H N N 433 TYR HD1 H N N 434 TYR HD2 H N N 435 TYR HE1 H N N 436 TYR HE2 H N N 437 TYR HH H N N 438 TYR HXT H N N 439 VAL N N N N 440 VAL CA C N S 441 VAL C C N N 442 VAL O O N N 443 VAL CB C N N 444 VAL CG1 C N N 445 VAL CG2 C N N 446 VAL OXT O N N 447 VAL H H N N 448 VAL H2 H N N 449 VAL HA H N N 450 VAL HB H N N 451 VAL HG11 H N N 452 VAL HG12 H N N 453 VAL HG13 H N N 454 VAL HG21 H N N 455 VAL HG22 H N N 456 VAL HG23 H N N 457 VAL HXT H N N 458 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 67Z CAB OAU sing N N 1 67Z OAU CBA sing N N 2 67Z CAK CBA doub Y N 3 67Z CAK CAJ sing Y N 4 67Z CBA CBB sing Y N 5 67Z CAJ CAZ doub Y N 6 67Z CBB CBC sing N N 7 67Z CBB CAL doub Y N 8 67Z CBC CAP sing N N 9 67Z CBC NBD sing N N 10 67Z CAZ CAL sing Y N 11 67Z CAZ OAT sing N N 12 67Z CAP CAM sing N N 13 67Z OAD CAV doub N N 14 67Z CAA OAT sing N N 15 67Z CA N sing N N 16 67Z CA C sing N N 17 67Z CAV N sing N N 18 67Z CAV NAS sing N N 19 67Z NBD C sing N N 20 67Z NBD CAQ sing N N 21 67Z CAO NAS sing N N 22 67Z CAO CAY sing N N 23 67Z CAM CAQ sing N N 24 67Z C O doub N N 25 67Z CAY CAH doub Y N 26 67Z CAY CAI sing Y N 27 67Z CAH CAF sing Y N 28 67Z CAI CAG doub Y N 29 67Z CAF CAX doub Y N 30 67Z CAG CAX sing Y N 31 67Z CAX NAC sing N N 32 67Z CAB H1 sing N N 33 67Z CAB H2 sing N N 34 67Z CAB H3 sing N N 35 67Z CAK H4 sing N N 36 67Z CAJ H5 sing N N 37 67Z CAA H6 sing N N 38 67Z CAA H7 sing N N 39 67Z CAA H8 sing N N 40 67Z CAL H9 sing N N 41 67Z CBC H10 sing N N 42 67Z CAP H11 sing N N 43 67Z CAP H12 sing N N 44 67Z CAM H13 sing N N 45 67Z CAM H14 sing N N 46 67Z CAQ H15 sing N N 47 67Z CAQ H16 sing N N 48 67Z CA H17 sing N N 49 67Z CA H18 sing N N 50 67Z N H19 sing N N 51 67Z NAS H20 sing N N 52 67Z CAO H21 sing N N 53 67Z CAO H22 sing N N 54 67Z CAH H23 sing N N 55 67Z CAF H24 sing N N 56 67Z NAC H25 sing N N 57 67Z NAC H26 sing N N 58 67Z CAG H27 sing N N 59 67Z CAI H28 sing N N 60 ALA N CA sing N N 61 ALA N H sing N N 62 ALA N H2 sing N N 63 ALA CA C sing N N 64 ALA CA CB sing N N 65 ALA CA HA sing N N 66 ALA C O doub N N 67 ALA C OXT sing N N 68 ALA CB HB1 sing N N 69 ALA CB HB2 sing N N 70 ALA CB HB3 sing N N 71 ALA OXT HXT sing N N 72 ARG N CA sing N N 73 ARG N H sing N N 74 ARG N H2 sing N N 75 ARG CA C sing N N 76 ARG CA CB sing N N 77 ARG CA HA sing N N 78 ARG C O doub N N 79 ARG C OXT sing N N 80 ARG CB CG sing N N 81 ARG CB HB2 sing N N 82 ARG CB HB3 sing N N 83 ARG CG CD sing N N 84 ARG CG HG2 sing N N 85 ARG CG HG3 sing N N 86 ARG CD NE sing N N 87 ARG CD HD2 sing N N 88 ARG CD HD3 sing N N 89 ARG NE CZ sing N N 90 ARG NE HE sing N N 91 ARG CZ NH1 sing N N 92 ARG CZ NH2 doub N N 93 ARG NH1 HH11 sing N N 94 ARG NH1 HH12 sing N N 95 ARG NH2 HH21 sing N N 96 ARG NH2 HH22 sing N N 97 ARG OXT HXT sing N N 98 ASN N CA sing N N 99 ASN N H sing N N 100 ASN N H2 sing N N 101 ASN CA C sing N N 102 ASN CA CB sing N N 103 ASN CA HA sing N N 104 ASN C O doub N N 105 ASN C OXT sing N N 106 ASN CB CG sing N N 107 ASN CB HB2 sing N N 108 ASN CB HB3 sing N N 109 ASN CG OD1 doub N N 110 ASN CG ND2 sing N N 111 ASN ND2 HD21 sing N N 112 ASN ND2 HD22 sing N N 113 ASN OXT HXT sing N N 114 ASP N CA sing N N 115 ASP N H sing N N 116 ASP N H2 sing N N 117 ASP CA C sing N N 118 ASP CA CB sing N N 119 ASP CA HA sing N N 120 ASP C O doub N N 121 ASP C OXT sing N N 122 ASP CB CG sing N N 123 ASP CB HB2 sing N N 124 ASP CB HB3 sing N N 125 ASP CG OD1 doub N N 126 ASP CG OD2 sing N N 127 ASP OD2 HD2 sing N N 128 ASP OXT HXT sing N N 129 CYS N CA sing N N 130 CYS N H sing N N 131 CYS N H2 sing N N 132 CYS CA C sing N N 133 CYS CA CB sing N N 134 CYS CA HA sing N N 135 CYS C O doub N N 136 CYS C OXT sing N N 137 CYS CB SG sing N N 138 CYS CB HB2 sing N N 139 CYS CB HB3 sing N N 140 CYS SG HG sing N N 141 CYS OXT HXT sing N N 142 DMS S O doub N N 143 DMS S C1 sing N N 144 DMS S C2 sing N N 145 DMS C1 H11 sing N N 146 DMS C1 H12 sing N N 147 DMS C1 H13 sing N N 148 DMS C2 H21 sing N N 149 DMS C2 H22 sing N N 150 DMS C2 H23 sing N N 151 GLN N CA sing N N 152 GLN N H sing N N 153 GLN N H2 sing N N 154 GLN CA C sing N N 155 GLN CA CB sing N N 156 GLN CA HA sing N N 157 GLN C O doub N N 158 GLN C OXT sing N N 159 GLN CB CG sing N N 160 GLN CB HB2 sing N N 161 GLN CB HB3 sing N N 162 GLN CG CD sing N N 163 GLN CG HG2 sing N N 164 GLN CG HG3 sing N N 165 GLN CD OE1 doub N N 166 GLN CD NE2 sing N N 167 GLN NE2 HE21 sing N N 168 GLN NE2 HE22 sing N N 169 GLN OXT HXT sing N N 170 GLU N CA sing N N 171 GLU N H sing N N 172 GLU N H2 sing N N 173 GLU CA C sing N N 174 GLU CA CB sing N N 175 GLU CA HA sing N N 176 GLU C O doub N N 177 GLU C OXT sing N N 178 GLU CB CG sing N N 179 GLU CB HB2 sing N N 180 GLU CB HB3 sing N N 181 GLU CG CD sing N N 182 GLU CG HG2 sing N N 183 GLU CG HG3 sing N N 184 GLU CD OE1 doub N N 185 GLU CD OE2 sing N N 186 GLU OE2 HE2 sing N N 187 GLU OXT HXT sing N N 188 GLY N CA sing N N 189 GLY N H sing N N 190 GLY N H2 sing N N 191 GLY CA C sing N N 192 GLY CA HA2 sing N N 193 GLY CA HA3 sing N N 194 GLY C O doub N N 195 GLY C OXT sing N N 196 GLY OXT HXT sing N N 197 HIS N CA sing N N 198 HIS N H sing N N 199 HIS N H2 sing N N 200 HIS CA C sing N N 201 HIS CA CB sing N N 202 HIS CA HA sing N N 203 HIS C O doub N N 204 HIS C OXT sing N N 205 HIS CB CG sing N N 206 HIS CB HB2 sing N N 207 HIS CB HB3 sing N N 208 HIS CG ND1 sing Y N 209 HIS CG CD2 doub Y N 210 HIS ND1 CE1 doub Y N 211 HIS ND1 HD1 sing N N 212 HIS CD2 NE2 sing Y N 213 HIS CD2 HD2 sing N N 214 HIS CE1 NE2 sing Y N 215 HIS CE1 HE1 sing N N 216 HIS NE2 HE2 sing N N 217 HIS OXT HXT sing N N 218 HOH O H1 sing N N 219 HOH O H2 sing N N 220 ILE N CA sing N N 221 ILE N H sing N N 222 ILE N H2 sing N N 223 ILE CA C sing N N 224 ILE CA CB sing N N 225 ILE CA HA sing N N 226 ILE C O doub N N 227 ILE C OXT sing N N 228 ILE CB CG1 sing N N 229 ILE CB CG2 sing N N 230 ILE CB HB sing N N 231 ILE CG1 CD1 sing N N 232 ILE CG1 HG12 sing N N 233 ILE CG1 HG13 sing N N 234 ILE CG2 HG21 sing N N 235 ILE CG2 HG22 sing N N 236 ILE CG2 HG23 sing N N 237 ILE CD1 HD11 sing N N 238 ILE CD1 HD12 sing N N 239 ILE CD1 HD13 sing N N 240 ILE OXT HXT sing N N 241 LEU N CA sing N N 242 LEU N H sing N N 243 LEU N H2 sing N N 244 LEU CA C sing N N 245 LEU CA CB sing N N 246 LEU CA HA sing N N 247 LEU C O doub N N 248 LEU C OXT sing N N 249 LEU CB CG sing N N 250 LEU CB HB2 sing N N 251 LEU CB HB3 sing N N 252 LEU CG CD1 sing N N 253 LEU CG CD2 sing N N 254 LEU CG HG sing N N 255 LEU CD1 HD11 sing N N 256 LEU CD1 HD12 sing N N 257 LEU CD1 HD13 sing N N 258 LEU CD2 HD21 sing N N 259 LEU CD2 HD22 sing N N 260 LEU CD2 HD23 sing N N 261 LEU OXT HXT sing N N 262 LYS N CA sing N N 263 LYS N H sing N N 264 LYS N H2 sing N N 265 LYS CA C sing N N 266 LYS CA CB sing N N 267 LYS CA HA sing N N 268 LYS C O doub N N 269 LYS C OXT sing N N 270 LYS CB CG sing N N 271 LYS CB HB2 sing N N 272 LYS CB HB3 sing N N 273 LYS CG CD sing N N 274 LYS CG HG2 sing N N 275 LYS CG HG3 sing N N 276 LYS CD CE sing N N 277 LYS CD HD2 sing N N 278 LYS CD HD3 sing N N 279 LYS CE NZ sing N N 280 LYS CE HE2 sing N N 281 LYS CE HE3 sing N N 282 LYS NZ HZ1 sing N N 283 LYS NZ HZ2 sing N N 284 LYS NZ HZ3 sing N N 285 LYS OXT HXT sing N N 286 MET N CA sing N N 287 MET N H sing N N 288 MET N H2 sing N N 289 MET CA C sing N N 290 MET CA CB sing N N 291 MET CA HA sing N N 292 MET C O doub N N 293 MET C OXT sing N N 294 MET CB CG sing N N 295 MET CB HB2 sing N N 296 MET CB HB3 sing N N 297 MET CG SD sing N N 298 MET CG HG2 sing N N 299 MET CG HG3 sing N N 300 MET SD CE sing N N 301 MET CE HE1 sing N N 302 MET CE HE2 sing N N 303 MET CE HE3 sing N N 304 MET OXT HXT sing N N 305 PHE N CA sing N N 306 PHE N H sing N N 307 PHE N H2 sing N N 308 PHE CA C sing N N 309 PHE CA CB sing N N 310 PHE CA HA sing N N 311 PHE C O doub N N 312 PHE C OXT sing N N 313 PHE CB CG sing N N 314 PHE CB HB2 sing N N 315 PHE CB HB3 sing N N 316 PHE CG CD1 doub Y N 317 PHE CG CD2 sing Y N 318 PHE CD1 CE1 sing Y N 319 PHE CD1 HD1 sing N N 320 PHE CD2 CE2 doub Y N 321 PHE CD2 HD2 sing N N 322 PHE CE1 CZ doub Y N 323 PHE CE1 HE1 sing N N 324 PHE CE2 CZ sing Y N 325 PHE CE2 HE2 sing N N 326 PHE CZ HZ sing N N 327 PHE OXT HXT sing N N 328 PRO N CA sing N N 329 PRO N CD sing N N 330 PRO N H sing N N 331 PRO CA C sing N N 332 PRO CA CB sing N N 333 PRO CA HA sing N N 334 PRO C O doub N N 335 PRO C OXT sing N N 336 PRO CB CG sing N N 337 PRO CB HB2 sing N N 338 PRO CB HB3 sing N N 339 PRO CG CD sing N N 340 PRO CG HG2 sing N N 341 PRO CG HG3 sing N N 342 PRO CD HD2 sing N N 343 PRO CD HD3 sing N N 344 PRO OXT HXT sing N N 345 SER N CA sing N N 346 SER N H sing N N 347 SER N H2 sing N N 348 SER CA C sing N N 349 SER CA CB sing N N 350 SER CA HA sing N N 351 SER C O doub N N 352 SER C OXT sing N N 353 SER CB OG sing N N 354 SER CB HB2 sing N N 355 SER CB HB3 sing N N 356 SER OG HG sing N N 357 SER OXT HXT sing N N 358 THR N CA sing N N 359 THR N H sing N N 360 THR N H2 sing N N 361 THR CA C sing N N 362 THR CA CB sing N N 363 THR CA HA sing N N 364 THR C O doub N N 365 THR C OXT sing N N 366 THR CB OG1 sing N N 367 THR CB CG2 sing N N 368 THR CB HB sing N N 369 THR OG1 HG1 sing N N 370 THR CG2 HG21 sing N N 371 THR CG2 HG22 sing N N 372 THR CG2 HG23 sing N N 373 THR OXT HXT sing N N 374 TRP N CA sing N N 375 TRP N H sing N N 376 TRP N H2 sing N N 377 TRP CA C sing N N 378 TRP CA CB sing N N 379 TRP CA HA sing N N 380 TRP C O doub N N 381 TRP C OXT sing N N 382 TRP CB CG sing N N 383 TRP CB HB2 sing N N 384 TRP CB HB3 sing N N 385 TRP CG CD1 doub Y N 386 TRP CG CD2 sing Y N 387 TRP CD1 NE1 sing Y N 388 TRP CD1 HD1 sing N N 389 TRP CD2 CE2 doub Y N 390 TRP CD2 CE3 sing Y N 391 TRP NE1 CE2 sing Y N 392 TRP NE1 HE1 sing N N 393 TRP CE2 CZ2 sing Y N 394 TRP CE3 CZ3 doub Y N 395 TRP CE3 HE3 sing N N 396 TRP CZ2 CH2 doub Y N 397 TRP CZ2 HZ2 sing N N 398 TRP CZ3 CH2 sing Y N 399 TRP CZ3 HZ3 sing N N 400 TRP CH2 HH2 sing N N 401 TRP OXT HXT sing N N 402 TYR N CA sing N N 403 TYR N H sing N N 404 TYR N H2 sing N N 405 TYR CA C sing N N 406 TYR CA CB sing N N 407 TYR CA HA sing N N 408 TYR C O doub N N 409 TYR C OXT sing N N 410 TYR CB CG sing N N 411 TYR CB HB2 sing N N 412 TYR CB HB3 sing N N 413 TYR CG CD1 doub Y N 414 TYR CG CD2 sing Y N 415 TYR CD1 CE1 sing Y N 416 TYR CD1 HD1 sing N N 417 TYR CD2 CE2 doub Y N 418 TYR CD2 HD2 sing N N 419 TYR CE1 CZ doub Y N 420 TYR CE1 HE1 sing N N 421 TYR CE2 CZ sing Y N 422 TYR CE2 HE2 sing N N 423 TYR CZ OH sing N N 424 TYR OH HH sing N N 425 TYR OXT HXT sing N N 426 VAL N CA sing N N 427 VAL N H sing N N 428 VAL N H2 sing N N 429 VAL CA C sing N N 430 VAL CA CB sing N N 431 VAL CA HA sing N N 432 VAL C O doub N N 433 VAL C OXT sing N N 434 VAL CB CG1 sing N N 435 VAL CB CG2 sing N N 436 VAL CB HB sing N N 437 VAL CG1 HG11 sing N N 438 VAL CG1 HG12 sing N N 439 VAL CG1 HG13 sing N N 440 VAL CG2 HG21 sing N N 441 VAL CG2 HG22 sing N N 442 VAL CG2 HG23 sing N N 443 VAL OXT HXT sing N N 444 # _atom_sites.entry_id 4J5A _atom_sites.fract_transf_matrix[1][1] 0.017516 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017516 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011355 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_