HEADER FLAVOPROTEIN 14-FEB-13 4J8P TITLE CRYSTAL STRUCTURE OF A PUTATIVE FLAVOPROTEIN (BACUNI_04544) FROM TITLE 2 BACTEROIDES UNIFORMIS ATCC 8492 AT 1.50 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: FLAVODOXIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES UNIFORMIS; SOURCE 3 ORGANISM_TAXID: 411479; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS PF12682 FAMILY PROTEIN IN COMPLEX WITH FMN, FLAVODOXIN_4, STRUCTURAL KEYWDS 2 GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN KEYWDS 3 STRUCTURE INITIATIVE, PSI-BIOLOGY, FLAVOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 4 01-FEB-23 4J8P 1 REMARK SEQADV LINK REVDAT 3 24-JAN-18 4J8P 1 JRNL REVDAT 2 15-NOV-17 4J8P 1 REMARK REVDAT 1 13-MAR-13 4J8P 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE FLAVOPROTEIN (BACUNI_04544) JRNL TITL 2 FROM BACTEROIDES UNIFORMIS ATCC 8492 AT 1.50 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.77 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 26608 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1332 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 13 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.56 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.33 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2977 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2150 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2824 REMARK 3 BIN R VALUE (WORKING SET) : 0.2135 REMARK 3 BIN FREE R VALUE : 0.2418 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.14 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 153 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1195 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 88 REMARK 3 SOLVENT ATOMS : 196 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.85 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.56300 REMARK 3 B22 (A**2) : -0.56300 REMARK 3 B33 (A**2) : 1.12590 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.192 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.965 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 1354 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 1843 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 611 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 27 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 225 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 1354 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 178 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 1856 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 0.92 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.96 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.44 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|23 - 178} REMARK 3 ORIGIN FOR THE GROUP (A): 36.3288 5.0571 9.4730 REMARK 3 T TENSOR REMARK 3 T11: -0.0100 T22: -0.0571 REMARK 3 T33: -0.0454 T12: -0.0112 REMARK 3 T13: 0.0147 T23: -0.0069 REMARK 3 L TENSOR REMARK 3 L11: 0.9877 L22: 1.5104 REMARK 3 L33: 1.1738 L12: 0.0598 REMARK 3 L13: -0.1279 L23: -0.0408 REMARK 3 S TENSOR REMARK 3 S11: -0.0253 S12: 0.0890 S13: 0.0489 REMARK 3 S21: -0.0620 S22: -0.0274 S23: -0.0823 REMARK 3 S31: 0.0475 S32: -0.0736 S33: 0.0527 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. A MET-INHIBITION PROTOCOL WAS USED REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. 3. THE MAD PHASES WERE USED AS RESTRAINTS DURING REMARK 3 REFINEMENT. 4. GOL, CL AND SO4 ARE PRESENT IN CRYSTALLIZATION/ REMARK 3 CRYO CONDITIONS. AN UNKNOWN LIGAND (UNL) WAS MODELED IN THE REMARK 3 ACTIVE SITE. THE UNL RESEMBLES NITROBENZENE (NBZ) OR BENZOIC REMARK 3 ACID. REMARK 4 REMARK 4 4J8P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-FEB-13. REMARK 100 THE DEPOSITION ID IS D_1000077736. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JAN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97858 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING); REMARK 200 SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE JULY 4, 2012 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26627 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 39.772 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.03400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.79600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.2000M AMMONIUM SULFATE, 0.1M TRIS PH REMARK 280 8.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.14600 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 28.12300 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 28.12300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 25.57300 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 28.12300 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 28.12300 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 76.71900 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 28.12300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 28.12300 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 25.57300 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 28.12300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 28.12300 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 76.71900 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 51.14600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 GLN A 21 REMARK 465 LYS A 22 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 23 CG CD CE NZ REMARK 470 LYS A 61 CD CE NZ REMARK 470 ARG A 169 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 139 -23.63 -164.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 209 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 210 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 211 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 212 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-417881 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 SEQUENCE THE CONSTRUCT (21-178) WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 4J8P A 21 178 UNP A7VAB4 A7VAB4_BACUN 21 178 SEQADV 4J8P GLY A 0 UNP A7VAB4 EXPRESSION TAG SEQRES 1 A 159 GLY GLN LYS LYS GLY GLY LYS THR LEU VAL ALA TYR PHE SEQRES 2 A 159 SER ALA THR GLY THR THR ALA ARG ALA ALA LYS LEU VAL SEQRES 3 A 159 ALA GLU ALA VAL ASP GLY THR PHE TYR GLU ILE GLN PRO SEQRES 4 A 159 ALA LYS LYS TYR THR ALA ALA ASP LEU ASP TRP HIS ASP SEQRES 5 A 159 LYS ALA SER ARG SER SER VAL GLU MSE SER ASP SER LYS SEQRES 6 A 159 SER ARG PRO ALA LEU TYR SER LYS LEU GLY SER LEU ALA SEQRES 7 A 159 GLU TYR ASP THR ILE TYR ILE GLY PHE PRO ILE TRP TRP SEQRES 8 A 159 ASN LEU ALA PRO ARG ILE ILE ASN THR PHE ILE GLU SER SEQRES 9 A 159 GLY ASP PHE ALA GLY LYS THR VAL ILE PRO PHE ALA THR SEQRES 10 A 159 SER GLY SER SER SER ILE SER ASN ALA GLU LYS GLU LEU SEQRES 11 A 159 GLN THR ASN TYR PRO GLY ILE ASN TRP GLY LYS GLY ARG SEQRES 12 A 159 LEU LEU ASN GLY ALA SER ARG GLU THR VAL LYS GLN TRP SEQRES 13 A 159 ILE LYS LYS MODRES 4J8P MSE A 80 MET SELENOMETHIONINE HET MSE A 80 8 HET FMN A 201 31 HET UNL A 202 9 HET GOL A 203 6 HET GOL A 204 12 HET GOL A 205 6 HET GOL A 206 6 HET GOL A 207 6 HET GOL A 208 6 HET SO4 A 209 5 HET SO4 A 210 5 HET CL A 211 1 HET CL A 212 1 HETNAM MSE SELENOMETHIONINE HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM UNL UNKNOWN LIGAND HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION HETSYN FMN RIBOFLAVIN MONOPHOSPHATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE C5 H11 N O2 SE FORMUL 2 FMN C17 H21 N4 O9 P FORMUL 4 GOL 6(C3 H8 O3) FORMUL 10 SO4 2(O4 S 2-) FORMUL 12 CL 2(CL 1-) FORMUL 14 HOH *196(H2 O) HELIX 1 1 GLY A 36 ASP A 50 1 15 HELIX 2 2 SER A 74 ASP A 82 1 9 HELIX 3 3 PRO A 114 GLU A 122 1 9 HELIX 4 4 ILE A 142 TYR A 153 1 12 HELIX 5 5 SER A 168 LYS A 178 1 11 SHEET 1 A 5 THR A 52 GLU A 55 0 SHEET 2 A 5 LYS A 26 TYR A 31 1 N VAL A 29 O THR A 52 SHEET 3 A 5 TYR A 99 PRO A 107 1 O TYR A 103 N LEU A 28 SHEET 4 A 5 THR A 130 THR A 136 1 O THR A 130 N ILE A 102 SHEET 5 A 5 ASN A 157 TRP A 158 1 O ASN A 157 N VAL A 131 SHEET 1 B 5 THR A 52 GLU A 55 0 SHEET 2 B 5 LYS A 26 TYR A 31 1 N VAL A 29 O THR A 52 SHEET 3 B 5 TYR A 99 PRO A 107 1 O TYR A 103 N LEU A 28 SHEET 4 B 5 THR A 130 THR A 136 1 O THR A 130 N ILE A 102 SHEET 5 B 5 ARG A 162 LEU A 163 1 O ARG A 162 N ALA A 135 LINK C GLU A 79 N MSE A 80 1555 1555 1.34 LINK C MSE A 80 N SER A 81 1555 1555 1.36 SITE 1 AC1 22 SER A 33 ALA A 34 THR A 35 GLY A 36 SITE 2 AC1 22 THR A 37 THR A 38 PHE A 53 SER A 76 SITE 3 AC1 22 PRO A 107 ILE A 108 TRP A 109 TRP A 110 SITE 4 AC1 22 ASN A 111 THR A 136 SER A 137 GLY A 138 SITE 5 AC1 22 SER A 139 SER A 140 HOH A 314 HOH A 362 SITE 6 AC1 22 HOH A 403 HOH A 406 SITE 1 AC2 9 TYR A 54 LEU A 93 GLY A 94 TYR A 99 SITE 2 AC2 9 GOL A 204 SO4 A 210 HOH A 332 HOH A 446 SITE 3 AC2 9 HOH A 496 SITE 1 AC3 8 LYS A 92 GLY A 94 SER A 141 SER A 143 SITE 2 AC3 8 GOL A 203 SO4 A 210 HOH A 332 HOH A 361 SITE 1 AC4 8 ALA A 88 LEU A 89 SER A 91 LYS A 92 SITE 2 AC4 8 LYS A 147 GLN A 150 HOH A 322 HOH A 326 SITE 1 AC5 8 GLY A 36 ALA A 39 ARG A 40 SER A 77 SITE 2 AC5 8 SER A 81 HOH A 380 HOH A 394 HOH A 434 SITE 1 AC6 4 GLY A 166 HOH A 347 HOH A 363 HOH A 403 SITE 1 AC7 9 GLU A 122 LYS A 160 GLY A 161 ARG A 162 SITE 2 AC7 9 TRP A 175 SO4 A 209 HOH A 329 HOH A 336 SITE 3 AC7 9 HOH A 423 SITE 1 AC8 5 GLU A 122 SER A 123 LYS A 160 GOL A 208 SITE 2 AC8 5 HOH A 416 SITE 1 AC9 11 TYR A 54 SER A 91 LYS A 92 SER A 143 SITE 2 AC9 11 GOL A 203 GOL A 204 HOH A 310 HOH A 327 SITE 3 AC9 11 HOH A 354 HOH A 402 HOH A 496 SITE 1 BC1 2 TYR A 153 GLY A 155 SITE 1 BC2 1 ALA A 64 CRYST1 56.246 56.246 102.292 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017779 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017779 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009776 0.00000