HEADER HYDROLASE 27-FEB-13 4JEN TITLE STRUCTURE OF CLOSTRIDIUM BOTULINUM CMP N-GLYCOSIDASE, BCMB COMPND MOL_ID: 1; COMPND 2 MOLECULE: CMP N-GLYCOSIDASE; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM BOTULINUM A; SOURCE 3 ORGANISM_TAXID: 441770; SOURCE 4 STRAIN: ATCC 19397; SOURCE 5 GENE: CLB_0809; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: MODIFIED PET28A KEYWDS CMP N-GLYCOSIDASE, BACIMETHRIN BIOSYNTHESIS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.D.SIKOWITZ,L.E.COOPER,T.P.BEGLEY,P.A.KAMINSKI,S.E.EALICK REVDAT 3 20-SEP-23 4JEN 1 REMARK SEQADV REVDAT 2 15-NOV-17 4JEN 1 REMARK REVDAT 1 11-SEP-13 4JEN 0 JRNL AUTH M.D.SIKOWITZ,L.E.COOPER,T.P.BEGLEY,P.A.KAMINSKI,S.E.EALICK JRNL TITL REVERSAL OF THE SUBSTRATE SPECIFICITY OF CMP N-GLYCOSIDASE JRNL TITL 2 TO DCMP. JRNL REF BIOCHEMISTRY V. 52 4037 2013 JRNL REFN ISSN 0006-2960 JRNL PMID 23659472 JRNL DOI 10.1021/BI400316P REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.54 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 14580 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.235 REMARK 3 R VALUE (WORKING SET) : 0.234 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 737 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.5445 - 5.1151 0.99 2829 130 0.2514 0.2348 REMARK 3 2 5.1151 - 4.0621 1.00 2792 148 0.2080 0.2198 REMARK 3 3 4.0621 - 3.5492 1.00 2764 158 0.2283 0.2612 REMARK 3 4 3.5492 - 3.2249 1.00 2780 153 0.2388 0.2881 REMARK 3 5 3.2249 - 2.9939 0.97 2678 148 0.2613 0.2960 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.690 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 65.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2757 REMARK 3 ANGLE : 0.542 3738 REMARK 3 CHIRALITY : 0.037 435 REMARK 3 PLANARITY : 0.002 459 REMARK 3 DIHEDRAL : 8.928 944 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN 'A' AND (RESSEQ 25:45 OR RESSEQ REMARK 3 59:108 OR RESSEQ 114:144 ) REMARK 3 SELECTION : CHAIN 'B' AND (RESSEQ 25:45 OR RESSEQ REMARK 3 59:108 OR RESSEQ 114:144 ) REMARK 3 ATOM PAIRS NUMBER : 782 REMARK 3 RMSD : 0.011 REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: CHAIN 'A' AND (RESSEQ 25:45 OR RESSEQ REMARK 3 59:108 OR RESSEQ 114:144 ) REMARK 3 SELECTION : CHAIN 'C' AND (RESSEQ 25:45 OR RESSEQ REMARK 3 59:108 OR RESSEQ 114:144 ) REMARK 3 ATOM PAIRS NUMBER : 748 REMARK 3 RMSD : 0.008 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4JEN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-MAR-13. REMARK 100 THE DEPOSITION ID IS D_1000077949. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : CRYOCOOLED SI(111) DOUBLE REMARK 200 CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14604 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.10100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.33300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4JEL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% PEG MME 2000, 0.1 M PHOSPHATE REMARK 280 -CITRATE, 0.01 M SPERMINE, 0.2 M AMMONIUM SULFATE, PH 4.4, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 88.97400 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.00300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 88.97400 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 52.00300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -183.53233 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 39.83548 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -22 REMARK 465 GLY A -21 REMARK 465 SER A -20 REMARK 465 ASP A -19 REMARK 465 LYS A -18 REMARK 465 ILE A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 GLU A -7 REMARK 465 ASN A -6 REMARK 465 LEU A -5 REMARK 465 TYR A -4 REMARK 465 PHE A -3 REMARK 465 GLN A -2 REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 PRO A 10 REMARK 465 PHE A 11 REMARK 465 LYS A 12 REMARK 465 GLY A 13 REMARK 465 ALA A 14 REMARK 465 ILE A 15 REMARK 465 LYS A 16 REMARK 465 GLU A 17 REMARK 465 LYS A 18 REMARK 465 GLN A 19 REMARK 465 SER A 20 REMARK 465 ALA A 47 REMARK 465 HIS A 48 REMARK 465 LYS A 49 REMARK 465 ARG A 50 REMARK 465 GLU A 51 REMARK 465 GLU A 52 REMARK 465 TRP A 53 REMARK 465 GLY A 54 REMARK 465 ALA A 55 REMARK 465 LYS A 110 REMARK 465 GLU A 111 REMARK 465 GLU A 112 REMARK 465 ASN A 113 REMARK 465 LEU A 146 REMARK 465 ASP A 147 REMARK 465 GLY A 148 REMARK 465 GLU A 149 REMARK 465 ASN A 150 REMARK 465 ASN A 151 REMARK 465 GLU A 152 REMARK 465 VAL A 153 REMARK 465 MET B -22 REMARK 465 GLY B -21 REMARK 465 SER B -20 REMARK 465 ASP B -19 REMARK 465 LYS B -18 REMARK 465 ILE B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 SER B -10 REMARK 465 SER B -9 REMARK 465 GLY B -8 REMARK 465 GLU B -7 REMARK 465 ASN B -6 REMARK 465 LEU B -5 REMARK 465 TYR B -4 REMARK 465 PHE B -3 REMARK 465 GLN B -2 REMARK 465 GLY B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 PRO B 10 REMARK 465 PHE B 11 REMARK 465 LYS B 12 REMARK 465 GLY B 13 REMARK 465 ALA B 14 REMARK 465 ILE B 15 REMARK 465 LYS B 16 REMARK 465 GLU B 17 REMARK 465 LYS B 18 REMARK 465 GLN B 19 REMARK 465 SER B 20 REMARK 465 ILE B 21 REMARK 465 HIS B 48 REMARK 465 LYS B 49 REMARK 465 ARG B 50 REMARK 465 GLU B 51 REMARK 465 GLU B 52 REMARK 465 TRP B 53 REMARK 465 GLY B 54 REMARK 465 ALA B 55 REMARK 465 ASN B 56 REMARK 465 GLU B 112 REMARK 465 ASP B 147 REMARK 465 GLY B 148 REMARK 465 GLU B 149 REMARK 465 ASN B 150 REMARK 465 ASN B 151 REMARK 465 GLU B 152 REMARK 465 VAL B 153 REMARK 465 MET C -22 REMARK 465 GLY C -21 REMARK 465 SER C -20 REMARK 465 ASP C -19 REMARK 465 LYS C -18 REMARK 465 ILE C -17 REMARK 465 HIS C -16 REMARK 465 HIS C -15 REMARK 465 HIS C -14 REMARK 465 HIS C -13 REMARK 465 HIS C -12 REMARK 465 HIS C -11 REMARK 465 SER C -10 REMARK 465 SER C -9 REMARK 465 GLY C -8 REMARK 465 GLU C -7 REMARK 465 ASN C -6 REMARK 465 LEU C -5 REMARK 465 TYR C -4 REMARK 465 PHE C -3 REMARK 465 GLN C -2 REMARK 465 GLY C -1 REMARK 465 HIS C 0 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 PRO C 10 REMARK 465 PHE C 11 REMARK 465 LYS C 12 REMARK 465 GLY C 13 REMARK 465 ALA C 14 REMARK 465 ILE C 15 REMARK 465 LYS C 16 REMARK 465 GLU C 17 REMARK 465 LYS C 18 REMARK 465 GLN C 19 REMARK 465 SER C 20 REMARK 465 ILE C 21 REMARK 465 MET C 22 REMARK 465 LYS C 23 REMARK 465 GLU C 24 REMARK 465 ASN C 46 REMARK 465 ALA C 47 REMARK 465 HIS C 48 REMARK 465 LYS C 49 REMARK 465 ARG C 50 REMARK 465 GLU C 51 REMARK 465 GLU C 52 REMARK 465 TRP C 53 REMARK 465 GLY C 54 REMARK 465 ALA C 55 REMARK 465 ASN C 56 REMARK 465 PHE C 57 REMARK 465 MET C 58 REMARK 465 GLU C 112 REMARK 465 TYR C 145 REMARK 465 LEU C 146 REMARK 465 ASP C 147 REMARK 465 GLY C 148 REMARK 465 GLU C 149 REMARK 465 ASN C 150 REMARK 465 ASN C 151 REMARK 465 GLU C 152 REMARK 465 VAL C 153 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 23 CG CD CE NZ REMARK 470 GLU A 26 CG CD OE1 OE2 REMARK 470 LYS A 27 CG CD CE NZ REMARK 470 GLU A 43 CG CD OE1 OE2 REMARK 470 GLN A 62 CG CD OE1 NE2 REMARK 470 LEU A 66 CG CD1 CD2 REMARK 470 GLU A 109 CG CD OE1 OE2 REMARK 470 TYR A 114 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 134 CG CD CE NZ REMARK 470 LYS A 136 CG CD CE NZ REMARK 470 LYS B 3 CB CG CD CE NZ REMARK 470 ARG B 4 CG CD NE CZ NH1 NH2 REMARK 470 MET B 22 CG SD CE REMARK 470 LYS B 23 CG CD CE NZ REMARK 470 GLN B 25 CB CG CD OE1 NE2 REMARK 470 GLU B 26 CG CD OE1 OE2 REMARK 470 LYS B 27 CG CD CE NZ REMARK 470 LYS B 28 CG CD CE NZ REMARK 470 GLU B 39 CG CD OE1 OE2 REMARK 470 GLU B 43 CG CD OE1 OE2 REMARK 470 GLU B 109 CG CD OE1 OE2 REMARK 470 LYS B 110 CG CD CE NZ REMARK 470 GLU B 111 CG CD OE1 OE2 REMARK 470 ASN B 113 CG OD1 ND2 REMARK 470 LYS B 136 CG CD CE NZ REMARK 470 LYS C 3 CB CG CD CE NZ REMARK 470 ARG C 4 CG CD NE CZ NH1 NH2 REMARK 470 GLN C 25 CB CG CD OE1 NE2 REMARK 470 GLU C 26 CG CD OE1 OE2 REMARK 470 LYS C 27 CG CD CE NZ REMARK 470 LYS C 28 CG CD CE NZ REMARK 470 ARG C 29 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 31 CG CD OE1 OE2 REMARK 470 GLN C 62 CG CD OE1 NE2 REMARK 470 GLU C 73 CG CD OE1 OE2 REMARK 470 LYS C 102 CG CD CE NZ REMARK 470 GLU C 109 CG CD OE1 OE2 REMARK 470 LYS C 110 CG CD CE NZ REMARK 470 GLU C 111 CG CD OE1 OE2 REMARK 470 ASN C 113 CG OD1 ND2 REMARK 470 TYR C 114 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 TYR C 116 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG C 119 CG CD NE CZ NH1 NH2 REMARK 470 ASN C 133 CG OD1 ND2 REMARK 470 LYS C 134 CG CD CE NZ REMARK 470 GLU C 137 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 45 31.18 -84.97 REMARK 500 ASN A 126 95.10 -68.55 REMARK 500 ASN B 126 95.20 -68.62 REMARK 500 GLU C 109 46.81 -81.33 REMARK 500 TYR C 114 -163.30 -116.70 REMARK 500 ASN C 126 95.13 -68.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 C 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4JEL RELATED DB: PDB REMARK 900 RELATED ID: 4JEM RELATED DB: PDB DBREF 4JEN A 1 153 UNP A7FS24 A7FS24_CLOB1 1 153 DBREF 4JEN B 1 153 UNP A7FS24 A7FS24_CLOB1 1 153 DBREF 4JEN C 1 153 UNP A7FS24 A7FS24_CLOB1 1 153 SEQADV 4JEN MET A -22 UNP A7FS24 INITIATING METHIONINE SEQADV 4JEN GLY A -21 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN SER A -20 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN ASP A -19 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN LYS A -18 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN ILE A -17 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN HIS A -16 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN HIS A -15 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN HIS A -14 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN HIS A -13 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN HIS A -12 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN HIS A -11 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN SER A -10 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN SER A -9 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN GLY A -8 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN GLU A -7 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN ASN A -6 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN LEU A -5 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN TYR A -4 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN PHE A -3 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN GLN A -2 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN GLY A -1 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN HIS A 0 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN MET B -22 UNP A7FS24 INITIATING METHIONINE SEQADV 4JEN GLY B -21 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN SER B -20 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN ASP B -19 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN LYS B -18 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN ILE B -17 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN HIS B -16 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN HIS B -15 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN HIS B -14 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN HIS B -13 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN HIS B -12 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN HIS B -11 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN SER B -10 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN SER B -9 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN GLY B -8 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN GLU B -7 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN ASN B -6 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN LEU B -5 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN TYR B -4 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN PHE B -3 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN GLN B -2 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN GLY B -1 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN HIS B 0 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN MET C -22 UNP A7FS24 INITIATING METHIONINE SEQADV 4JEN GLY C -21 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN SER C -20 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN ASP C -19 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN LYS C -18 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN ILE C -17 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN HIS C -16 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN HIS C -15 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN HIS C -14 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN HIS C -13 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN HIS C -12 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN HIS C -11 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN SER C -10 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN SER C -9 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN GLY C -8 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN GLU C -7 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN ASN C -6 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN LEU C -5 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN TYR C -4 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN PHE C -3 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN GLN C -2 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN GLY C -1 UNP A7FS24 EXPRESSION TAG SEQADV 4JEN HIS C 0 UNP A7FS24 EXPRESSION TAG SEQRES 1 A 176 MET GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS SER SEQRES 2 A 176 SER GLY GLU ASN LEU TYR PHE GLN GLY HIS MET SER LYS SEQRES 3 A 176 ARG VAL PHE LEU ALA ALA PRO PHE LYS GLY ALA ILE LYS SEQRES 4 A 176 GLU LYS GLN SER ILE MET LYS GLU GLN GLU LYS LYS ARG SEQRES 5 A 176 ILE GLU ASP LEU ILE LEU PHE LEU GLU GLU LYS GLY TRP SEQRES 6 A 176 GLU VAL ASP ASN ALA HIS LYS ARG GLU GLU TRP GLY ALA SEQRES 7 A 176 ASN PHE MET SER PRO ASP GLN CYS THR LYS LEU ASP TYR SEQRES 8 A 176 ASP ALA ILE LYS GLU CYS ASP LEU PHE ILE ALA PHE PRO SEQRES 9 A 176 GLY VAL PRO VAL SER PRO GLY THR HIS ILE GLU ILE GLY SEQRES 10 A 176 TRP ALA SER ALA MET GLY LYS LYS ILE ILE LEU LEU LEU SEQRES 11 A 176 ALA GLU LYS GLU GLU ASN TYR ALA TYR LEU ILE ARG GLY SEQRES 12 A 176 LEU HIS THR VAL SER ASN VAL HIS TYR ILE ILE TYR ASN SEQRES 13 A 176 LYS GLU LYS GLU TYR LEU GLN LYS LEU ASP LEU TYR LEU SEQRES 14 A 176 ASP GLY GLU ASN ASN GLU VAL SEQRES 1 B 176 MET GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS SER SEQRES 2 B 176 SER GLY GLU ASN LEU TYR PHE GLN GLY HIS MET SER LYS SEQRES 3 B 176 ARG VAL PHE LEU ALA ALA PRO PHE LYS GLY ALA ILE LYS SEQRES 4 B 176 GLU LYS GLN SER ILE MET LYS GLU GLN GLU LYS LYS ARG SEQRES 5 B 176 ILE GLU ASP LEU ILE LEU PHE LEU GLU GLU LYS GLY TRP SEQRES 6 B 176 GLU VAL ASP ASN ALA HIS LYS ARG GLU GLU TRP GLY ALA SEQRES 7 B 176 ASN PHE MET SER PRO ASP GLN CYS THR LYS LEU ASP TYR SEQRES 8 B 176 ASP ALA ILE LYS GLU CYS ASP LEU PHE ILE ALA PHE PRO SEQRES 9 B 176 GLY VAL PRO VAL SER PRO GLY THR HIS ILE GLU ILE GLY SEQRES 10 B 176 TRP ALA SER ALA MET GLY LYS LYS ILE ILE LEU LEU LEU SEQRES 11 B 176 ALA GLU LYS GLU GLU ASN TYR ALA TYR LEU ILE ARG GLY SEQRES 12 B 176 LEU HIS THR VAL SER ASN VAL HIS TYR ILE ILE TYR ASN SEQRES 13 B 176 LYS GLU LYS GLU TYR LEU GLN LYS LEU ASP LEU TYR LEU SEQRES 14 B 176 ASP GLY GLU ASN ASN GLU VAL SEQRES 1 C 176 MET GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS SER SEQRES 2 C 176 SER GLY GLU ASN LEU TYR PHE GLN GLY HIS MET SER LYS SEQRES 3 C 176 ARG VAL PHE LEU ALA ALA PRO PHE LYS GLY ALA ILE LYS SEQRES 4 C 176 GLU LYS GLN SER ILE MET LYS GLU GLN GLU LYS LYS ARG SEQRES 5 C 176 ILE GLU ASP LEU ILE LEU PHE LEU GLU GLU LYS GLY TRP SEQRES 6 C 176 GLU VAL ASP ASN ALA HIS LYS ARG GLU GLU TRP GLY ALA SEQRES 7 C 176 ASN PHE MET SER PRO ASP GLN CYS THR LYS LEU ASP TYR SEQRES 8 C 176 ASP ALA ILE LYS GLU CYS ASP LEU PHE ILE ALA PHE PRO SEQRES 9 C 176 GLY VAL PRO VAL SER PRO GLY THR HIS ILE GLU ILE GLY SEQRES 10 C 176 TRP ALA SER ALA MET GLY LYS LYS ILE ILE LEU LEU LEU SEQRES 11 C 176 ALA GLU LYS GLU GLU ASN TYR ALA TYR LEU ILE ARG GLY SEQRES 12 C 176 LEU HIS THR VAL SER ASN VAL HIS TYR ILE ILE TYR ASN SEQRES 13 C 176 LYS GLU LYS GLU TYR LEU GLN LYS LEU ASP LEU TYR LEU SEQRES 14 C 176 ASP GLY GLU ASN ASN GLU VAL HET PO4 A 201 5 HET PO4 B 201 5 HET PO4 C 201 5 HETNAM PO4 PHOSPHATE ION FORMUL 4 PO4 3(O4 P 3-) FORMUL 7 HOH *10(H2 O) HELIX 1 1 MET A 22 GLU A 39 1 18 HELIX 2 2 SER A 59 CYS A 74 1 16 HELIX 3 3 SER A 86 GLY A 100 1 15 HELIX 4 4 ALA A 115 GLY A 120 1 6 HELIX 5 5 LEU A 121 VAL A 124 5 4 HELIX 6 6 LYS A 134 TYR A 145 1 12 HELIX 7 7 LYS B 23 GLU B 39 1 17 HELIX 8 8 SER B 59 CYS B 74 1 16 HELIX 9 9 SER B 86 GLY B 100 1 15 HELIX 10 10 ALA B 115 GLY B 120 1 6 HELIX 11 11 LEU B 121 VAL B 124 5 4 HELIX 12 12 LYS B 134 TYR B 145 1 12 HELIX 13 13 GLU C 26 GLU C 39 1 14 HELIX 14 14 PRO C 60 CYS C 74 1 15 HELIX 15 15 SER C 86 GLY C 100 1 15 HELIX 16 16 ALA C 115 GLY C 120 1 6 HELIX 17 17 LEU C 121 VAL C 124 5 4 HELIX 18 18 LYS C 134 LEU C 144 1 11 SHEET 1 A 5 GLU A 43 VAL A 44 0 SHEET 2 A 5 ARG A 4 ALA A 8 1 N VAL A 5 O GLU A 43 SHEET 3 A 5 LEU A 76 ALA A 79 1 O ILE A 78 N ALA A 8 SHEET 4 A 5 LYS A 102 ALA A 108 1 O LYS A 102 N PHE A 77 SHEET 5 A 5 VAL A 127 TYR A 132 1 O HIS A 128 N ILE A 103 SHEET 1 B 5 GLU B 43 VAL B 44 0 SHEET 2 B 5 ARG B 4 ALA B 8 1 N VAL B 5 O GLU B 43 SHEET 3 B 5 LEU B 76 ALA B 79 1 O LEU B 76 N PHE B 6 SHEET 4 B 5 LYS B 102 ALA B 108 1 O LYS B 102 N PHE B 77 SHEET 5 B 5 VAL B 127 TYR B 132 1 O HIS B 128 N ILE B 103 SHEET 1 C 5 GLU C 43 VAL C 44 0 SHEET 2 C 5 ARG C 4 ALA C 8 1 N VAL C 5 O GLU C 43 SHEET 3 C 5 LEU C 76 ALA C 79 1 O ILE C 78 N ALA C 8 SHEET 4 C 5 LYS C 102 ALA C 108 1 O LYS C 102 N PHE C 77 SHEET 5 C 5 VAL C 127 TYR C 132 1 O HIS C 128 N ILE C 103 CISPEP 1 VAL A 83 PRO A 84 0 2.18 CISPEP 2 VAL B 83 PRO B 84 0 2.27 CISPEP 3 GLU B 109 LYS B 110 0 2.21 CISPEP 4 LYS B 110 GLU B 111 0 -1.72 CISPEP 5 VAL C 83 PRO C 84 0 2.14 SITE 1 AC1 5 SER A 86 PRO A 87 GLY A 88 ALA B 115 SITE 2 AC1 5 TYR B 116 SITE 1 AC2 4 ALA A 115 SER B 86 PRO B 87 GLY B 88 SITE 1 AC3 3 SER C 86 GLY C 88 ALA C 115 CRYST1 177.948 104.006 40.225 90.00 97.98 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005620 0.000000 0.000788 0.00000 SCALE2 0.000000 0.009615 0.000000 0.00000 SCALE3 0.000000 0.000000 0.025103 0.00000