HEADER TRANSFERASE 27-FEB-13 4JEV TITLE N-ACETYLORNITHINE AMINOTRANSFERASE FROM S. TYPHIMURIUM COMPLEXED WITH TITLE 2 GABACULINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACETYLORNITHINE/SUCCINYLDIAMINOPIMELATE AMINOTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ACOAT, DAPATASE, SUCCINYLDIAMINOPIMELATE TRANSFERASE; COMPND 5 EC: 2.6.1.11, 2.6.1.17; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA TYPHIMURIUM; SOURCE 3 ORGANISM_TAXID: 99287; SOURCE 4 STRAIN: LT2; SOURCE 5 GENE: ARGD, DAPC, DTU, STM3468; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) ROSETTA; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PRSET C KEYWDS PLP DEPENDENT FOLD TYPE I SUBCLASS II AMINOTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.BISHT,S.R.BHARATH,M.R.N.MURTHY REVDAT 4 09-OCT-24 4JEV 1 REMARK REVDAT 3 06-DEC-23 4JEV 1 REMARK REVDAT 2 08-NOV-23 4JEV 1 REMARK SEQADV LINK REVDAT 1 26-MAR-14 4JEV 0 JRNL AUTH S.BISHT,S.R.BHARATH,M.R.N.MURTHY JRNL TITL CONFORMATIONAL TRANSITIONS, LIGAND SPECIFICITY AND CATALYSIS JRNL TITL 2 IN N-ACETYLORNITHINE AMINOTRANSFERASE: IMPLICATIONS ON DRUG JRNL TITL 3 DESIGNING AND RATIONAL ENZYME ENGINEERING IN OMEGA JRNL TITL 4 AMINOTRANSFERASES. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.67 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.67 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.69 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 78025 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 4161 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.67 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.71 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5079 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.68 REMARK 3 BIN R VALUE (WORKING SET) : 0.2540 REMARK 3 BIN FREE R VALUE SET COUNT : 276 REMARK 3 BIN FREE R VALUE : 0.2830 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6054 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 60 REMARK 3 SOLVENT ATOMS : 713 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.45 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.31000 REMARK 3 B22 (A**2) : 0.60000 REMARK 3 B33 (A**2) : -0.29000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.102 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.095 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.058 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.688 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6295 ; 0.008 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8554 ; 1.258 ; 1.951 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 812 ; 5.654 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 272 ;34.030 ;23.824 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 956 ;11.964 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 31 ;16.798 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 947 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4861 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4JEV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-MAR-13. REMARK 100 THE DEPOSITION ID IS D_1000077957. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JAN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NI FILTER REMARK 200 OPTICS : OSMIC MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 82245 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.670 REMARK 200 RESOLUTION RANGE LOW (A) : 36.810 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.10600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.67 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.57000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2PB0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG 3350, 0.5M AMMONIUM ACETATE, REMARK 280 0.1M TRIS, PH 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 48.33000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.93000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 48.33000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 55.93000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -96.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 857 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 716 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -14 REMARK 465 ARG A -13 REMARK 465 GLY A -12 REMARK 465 SER A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 GLY A -4 REMARK 465 MET A -3 REMARK 465 ALA A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 THR A 3 REMARK 465 GLU A 4 REMARK 465 GLN A 5 REMARK 465 THR A 6 REMARK 465 MET B -14 REMARK 465 ARG B -13 REMARK 465 GLY B -12 REMARK 465 SER B -11 REMARK 465 HIS B -10 REMARK 465 HIS B -9 REMARK 465 HIS B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 GLY B -4 REMARK 465 MET B -3 REMARK 465 ALA B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 THR B 3 REMARK 465 GLU B 4 REMARK 465 GLN B 5 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 15 CD OE1 OE2 REMARK 470 LYS A 32 CD CE NZ REMARK 470 LYS A 156 CE NZ REMARK 470 LYS A 180 NZ REMARK 470 GLU A 207 CD OE1 OE2 REMARK 470 GLU A 327 CD OE1 OE2 REMARK 470 GLN A 328 CD OE1 NE2 REMARK 470 LYS A 351 CD CE NZ REMARK 470 ARG A 355 CD NE CZ NH1 NH2 REMARK 470 GLU A 363 CD OE1 OE2 REMARK 470 LYS A 402 CD CE NZ REMARK 470 LYS B 180 CE NZ REMARK 470 GLU B 207 CG CD OE1 OE2 REMARK 470 LYS B 210 CD CE NZ REMARK 470 GLU B 327 CD OE1 OE2 REMARK 470 LYS B 351 CD CE NZ REMARK 470 GLN B 394 CD OE1 NE2 REMARK 470 LYS B 402 CE NZ REMARK 470 LEU B 406 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 74 127.45 -170.57 REMARK 500 SER A 78 158.48 79.38 REMARK 500 HIS A 127 -66.49 -133.46 REMARK 500 ALA A 254 -146.86 -159.06 REMARK 500 LYS A 255 -100.66 49.24 REMARK 500 LEU B 74 127.99 -170.78 REMARK 500 SER B 78 164.31 79.59 REMARK 500 HIS B 127 -63.78 -131.15 REMARK 500 SER B 128 139.63 -171.62 REMARK 500 ALA B 254 -141.79 -160.10 REMARK 500 LYS B 255 -97.72 42.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 503 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ILE A 94 O REMARK 620 2 THR A 97 O 80.8 REMARK 620 3 ALA A 99 O 92.6 101.7 REMARK 620 4 HOH A 794 O 167.0 94.7 100.2 REMARK 620 5 HOH A 837 O 99.8 164.6 93.6 81.3 REMARK 620 6 HOH A 951 O 81.7 71.3 171.5 85.3 93.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 503 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ILE B 94 O REMARK 620 2 THR B 97 O 80.0 REMARK 620 3 ALA B 99 O 93.3 103.4 REMARK 620 4 HOH B 603 O 173.2 96.1 93.0 REMARK 620 5 HOH B 931 O 90.1 153.3 101.8 91.1 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PXG A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PXG B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 503 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2PB0 RELATED DB: PDB REMARK 900 RELATED ID: 2PB2 RELATED DB: PDB REMARK 900 RELATED ID: 4JEW RELATED DB: PDB REMARK 900 RELATED ID: 4JEX RELATED DB: PDB REMARK 900 RELATED ID: 4JEY RELATED DB: PDB REMARK 900 RELATED ID: 4JEZ RELATED DB: PDB REMARK 900 RELATED ID: 4JF0 RELATED DB: PDB REMARK 900 RELATED ID: 4JF1 RELATED DB: PDB DBREF 4JEV A 1 405 UNP P40732 ARGD_SALTY 1 405 DBREF 4JEV B 1 405 UNP P40732 ARGD_SALTY 1 405 SEQADV 4JEV MET A -14 UNP P40732 EXPRESSION TAG SEQADV 4JEV ARG A -13 UNP P40732 EXPRESSION TAG SEQADV 4JEV GLY A -12 UNP P40732 EXPRESSION TAG SEQADV 4JEV SER A -11 UNP P40732 EXPRESSION TAG SEQADV 4JEV HIS A -10 UNP P40732 EXPRESSION TAG SEQADV 4JEV HIS A -9 UNP P40732 EXPRESSION TAG SEQADV 4JEV HIS A -8 UNP P40732 EXPRESSION TAG SEQADV 4JEV HIS A -7 UNP P40732 EXPRESSION TAG SEQADV 4JEV HIS A -6 UNP P40732 EXPRESSION TAG SEQADV 4JEV HIS A -5 UNP P40732 EXPRESSION TAG SEQADV 4JEV GLY A -4 UNP P40732 EXPRESSION TAG SEQADV 4JEV MET A -3 UNP P40732 EXPRESSION TAG SEQADV 4JEV ALA A -2 UNP P40732 EXPRESSION TAG SEQADV 4JEV SER A -1 UNP P40732 EXPRESSION TAG SEQADV 4JEV HIS A 0 UNP P40732 EXPRESSION TAG SEQADV 4JEV THR A 298 UNP P40732 ALA 298 ENGINEERED MUTATION SEQADV 4JEV LEU A 406 UNP P40732 EXPRESSION TAG SEQADV 4JEV GLU A 407 UNP P40732 EXPRESSION TAG SEQADV 4JEV MET B -14 UNP P40732 EXPRESSION TAG SEQADV 4JEV ARG B -13 UNP P40732 EXPRESSION TAG SEQADV 4JEV GLY B -12 UNP P40732 EXPRESSION TAG SEQADV 4JEV SER B -11 UNP P40732 EXPRESSION TAG SEQADV 4JEV HIS B -10 UNP P40732 EXPRESSION TAG SEQADV 4JEV HIS B -9 UNP P40732 EXPRESSION TAG SEQADV 4JEV HIS B -8 UNP P40732 EXPRESSION TAG SEQADV 4JEV HIS B -7 UNP P40732 EXPRESSION TAG SEQADV 4JEV HIS B -6 UNP P40732 EXPRESSION TAG SEQADV 4JEV HIS B -5 UNP P40732 EXPRESSION TAG SEQADV 4JEV GLY B -4 UNP P40732 EXPRESSION TAG SEQADV 4JEV MET B -3 UNP P40732 EXPRESSION TAG SEQADV 4JEV ALA B -2 UNP P40732 EXPRESSION TAG SEQADV 4JEV SER B -1 UNP P40732 EXPRESSION TAG SEQADV 4JEV HIS B 0 UNP P40732 EXPRESSION TAG SEQADV 4JEV THR B 298 UNP P40732 ALA 298 ENGINEERED MUTATION SEQADV 4JEV LEU B 406 UNP P40732 EXPRESSION TAG SEQADV 4JEV GLU B 407 UNP P40732 EXPRESSION TAG SEQRES 1 A 422 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 A 422 SER HIS MET ALA THR GLU GLN THR ALA ILE THR ARG ALA SEQRES 3 A 422 THR PHE ASP GLU VAL ILE LEU PRO VAL TYR ALA PRO ALA SEQRES 4 A 422 ASP PHE ILE PRO VAL LYS GLY LYS GLY SER ARG VAL TRP SEQRES 5 A 422 ASP GLN GLN GLY LYS GLU TYR ILE ASP PHE ALA GLY GLY SEQRES 6 A 422 ILE ALA VAL THR ALA LEU GLY HIS CYS HIS PRO ALA LEU SEQRES 7 A 422 VAL GLU ALA LEU LYS SER GLN GLY GLU THR LEU TRP HIS SEQRES 8 A 422 THR SER ASN VAL PHE THR ASN GLU PRO ALA LEU ARG LEU SEQRES 9 A 422 GLY ARG LYS LEU ILE ASP ALA THR PHE ALA GLU ARG VAL SEQRES 10 A 422 LEU PHE MET ASN SER GLY THR GLU ALA ASN GLU THR ALA SEQRES 11 A 422 PHE LYS LEU ALA ARG HIS TYR ALA CSO VAL ARG HIS SER SEQRES 12 A 422 PRO PHE LYS THR LYS ILE ILE ALA PHE HIS ASN ALA PHE SEQRES 13 A 422 HIS GLY ARG SER LEU PHE THR VAL SER VAL GLY GLY GLN SEQRES 14 A 422 PRO LYS TYR SER ASP GLY PHE GLY PRO LYS PRO ALA ASP SEQRES 15 A 422 ILE ILE HIS VAL PRO PHE ASN ASP LEU HIS ALA VAL LYS SEQRES 16 A 422 ALA VAL MET ASP ASP HIS THR CYS ALA VAL VAL VAL GLU SEQRES 17 A 422 PRO ILE GLN GLY GLU GLY GLY VAL GLN ALA ALA THR PRO SEQRES 18 A 422 GLU PHE LEU LYS GLY LEU ARG ASP LEU CYS ASP GLU HIS SEQRES 19 A 422 GLN ALA LEU LEU VAL PHE ASP GLU VAL GLN CYS GLY MET SEQRES 20 A 422 GLY ARG THR GLY ASP LEU PHE ALA TYR MET HIS TYR GLY SEQRES 21 A 422 VAL THR PRO ASP ILE LEU THR SER ALA LYS ALA LEU GLY SEQRES 22 A 422 GLY GLY PHE PRO VAL SER ALA MET LEU THR THR GLN GLU SEQRES 23 A 422 ILE ALA SER ALA PHE HIS VAL GLY SER HIS GLY SER THR SEQRES 24 A 422 TYR GLY GLY ASN PRO LEU ALA CYS ALA VAL ALA GLY ALA SEQRES 25 A 422 THR PHE ASP ILE ILE ASN THR PRO GLU VAL LEU GLN GLY SEQRES 26 A 422 ILE HIS THR LYS ARG GLN GLN PHE VAL GLN HIS LEU GLN SEQRES 27 A 422 ALA ILE ASP GLU GLN PHE ASP ILE PHE SER ASP ILE ARG SEQRES 28 A 422 GLY MET GLY LEU LEU ILE GLY ALA GLU LEU LYS PRO LYS SEQRES 29 A 422 TYR LYS GLY ARG ALA ARG ASP PHE LEU TYR ALA GLY ALA SEQRES 30 A 422 GLU ALA GLY VAL MET VAL LEU ASN ALA GLY ALA ASP VAL SEQRES 31 A 422 MET ARG PHE ALA PRO SER LEU VAL VAL GLU GLU ALA ASP SEQRES 32 A 422 ILE HIS GLU GLY MET GLN ARG PHE ALA GLN ALA VAL GLY SEQRES 33 A 422 LYS VAL VAL ALA LEU GLU SEQRES 1 B 422 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 B 422 SER HIS MET ALA THR GLU GLN THR ALA ILE THR ARG ALA SEQRES 3 B 422 THR PHE ASP GLU VAL ILE LEU PRO VAL TYR ALA PRO ALA SEQRES 4 B 422 ASP PHE ILE PRO VAL LYS GLY LYS GLY SER ARG VAL TRP SEQRES 5 B 422 ASP GLN GLN GLY LYS GLU TYR ILE ASP PHE ALA GLY GLY SEQRES 6 B 422 ILE ALA VAL THR ALA LEU GLY HIS CYS HIS PRO ALA LEU SEQRES 7 B 422 VAL GLU ALA LEU LYS SER GLN GLY GLU THR LEU TRP HIS SEQRES 8 B 422 THR SER ASN VAL PHE THR ASN GLU PRO ALA LEU ARG LEU SEQRES 9 B 422 GLY ARG LYS LEU ILE ASP ALA THR PHE ALA GLU ARG VAL SEQRES 10 B 422 LEU PHE MET ASN SER GLY THR GLU ALA ASN GLU THR ALA SEQRES 11 B 422 PHE LYS LEU ALA ARG HIS TYR ALA CSO VAL ARG HIS SER SEQRES 12 B 422 PRO PHE LYS THR LYS ILE ILE ALA PHE HIS ASN ALA PHE SEQRES 13 B 422 HIS GLY ARG SER LEU PHE THR VAL SER VAL GLY GLY GLN SEQRES 14 B 422 PRO LYS TYR SER ASP GLY PHE GLY PRO LYS PRO ALA ASP SEQRES 15 B 422 ILE ILE HIS VAL PRO PHE ASN ASP LEU HIS ALA VAL LYS SEQRES 16 B 422 ALA VAL MET ASP ASP HIS THR CYS ALA VAL VAL VAL GLU SEQRES 17 B 422 PRO ILE GLN GLY GLU GLY GLY VAL GLN ALA ALA THR PRO SEQRES 18 B 422 GLU PHE LEU LYS GLY LEU ARG ASP LEU CYS ASP GLU HIS SEQRES 19 B 422 GLN ALA LEU LEU VAL PHE ASP GLU VAL GLN CYS GLY MET SEQRES 20 B 422 GLY ARG THR GLY ASP LEU PHE ALA TYR MET HIS TYR GLY SEQRES 21 B 422 VAL THR PRO ASP ILE LEU THR SER ALA LYS ALA LEU GLY SEQRES 22 B 422 GLY GLY PHE PRO VAL SER ALA MET LEU THR THR GLN GLU SEQRES 23 B 422 ILE ALA SER ALA PHE HIS VAL GLY SER HIS GLY SER THR SEQRES 24 B 422 TYR GLY GLY ASN PRO LEU ALA CYS ALA VAL ALA GLY ALA SEQRES 25 B 422 THR PHE ASP ILE ILE ASN THR PRO GLU VAL LEU GLN GLY SEQRES 26 B 422 ILE HIS THR LYS ARG GLN GLN PHE VAL GLN HIS LEU GLN SEQRES 27 B 422 ALA ILE ASP GLU GLN PHE ASP ILE PHE SER ASP ILE ARG SEQRES 28 B 422 GLY MET GLY LEU LEU ILE GLY ALA GLU LEU LYS PRO LYS SEQRES 29 B 422 TYR LYS GLY ARG ALA ARG ASP PHE LEU TYR ALA GLY ALA SEQRES 30 B 422 GLU ALA GLY VAL MET VAL LEU ASN ALA GLY ALA ASP VAL SEQRES 31 B 422 MET ARG PHE ALA PRO SER LEU VAL VAL GLU GLU ALA ASP SEQRES 32 B 422 ILE HIS GLU GLY MET GLN ARG PHE ALA GLN ALA VAL GLY SEQRES 33 B 422 LYS VAL VAL ALA LEU GLU MODRES 4JEV CSO A 124 CYS S-HYDROXYCYSTEINE MODRES 4JEV CSO B 124 CYS S-HYDROXYCYSTEINE HET CSO A 124 7 HET CSO B 124 7 HET PXG A 501 25 HET ACT A 502 4 HET NA A 503 1 HET PXG B 501 25 HET ACT B 502 4 HET NA B 503 1 HETNAM CSO S-HYDROXYCYSTEINE HETNAM PXG 3-[O-PHOSPHONOPYRIDOXYL]--AMINO-BENZOIC ACID HETNAM ACT ACETATE ION HETNAM NA SODIUM ION FORMUL 1 CSO 2(C3 H7 N O3 S) FORMUL 3 PXG 2(C15 H17 N2 O7 P) FORMUL 4 ACT 2(C2 H3 O2 1-) FORMUL 5 NA 2(NA 1+) FORMUL 9 HOH *713(H2 O) HELIX 1 1 THR A 9 ILE A 17 1 9 HELIX 2 2 ALA A 48 VAL A 53 1 6 HELIX 3 3 HIS A 60 GLU A 72 1 13 HELIX 4 4 ASN A 83 THR A 97 1 15 HELIX 5 5 SER A 107 HIS A 127 1 21 HELIX 6 6 SER A 145 GLY A 152 1 8 HELIX 7 7 GLN A 154 ASP A 159 1 6 HELIX 8 8 ASP A 175 MET A 183 1 9 HELIX 9 9 THR A 205 GLN A 220 1 16 HELIX 10 10 PHE A 239 GLY A 245 1 7 HELIX 11 11 ALA A 254 GLY A 259 5 6 HELIX 12 12 THR A 269 SER A 274 1 6 HELIX 13 13 ASN A 288 ASN A 303 1 16 HELIX 14 14 THR A 304 ASP A 330 1 27 HELIX 15 15 PRO A 348 LYS A 351 5 4 HELIX 16 16 ARG A 353 ALA A 364 1 12 HELIX 17 17 GLU A 385 LEU A 406 1 22 HELIX 18 18 THR B 9 ILE B 17 1 9 HELIX 19 19 ALA B 48 VAL B 53 1 6 HELIX 20 20 HIS B 60 GLU B 72 1 13 HELIX 21 21 ASN B 83 THR B 97 1 15 HELIX 22 22 SER B 107 HIS B 127 1 21 HELIX 23 23 SER B 145 GLY B 152 1 8 HELIX 24 24 GLN B 154 ASP B 159 1 6 HELIX 25 25 ASP B 175 MET B 183 1 9 HELIX 26 26 THR B 205 GLN B 220 1 16 HELIX 27 27 PHE B 239 GLY B 245 1 7 HELIX 28 28 ALA B 254 GLY B 259 5 6 HELIX 29 29 THR B 269 SER B 274 1 6 HELIX 30 30 ASN B 288 ASN B 303 1 16 HELIX 31 31 THR B 304 ASP B 330 1 27 HELIX 32 32 PRO B 348 LYS B 351 5 4 HELIX 33 33 ARG B 353 ALA B 364 1 12 HELIX 34 34 GLU B 385 VAL B 404 1 20 SHEET 1 A 4 PRO A 28 LYS A 32 0 SHEET 2 A 4 ARG A 35 ASP A 38 -1 O TRP A 37 N VAL A 29 SHEET 3 A 4 GLU A 43 ASP A 46 -1 O TYR A 44 N VAL A 36 SHEET 4 A 4 VAL A 366 MET A 367 1 O MET A 367 N ILE A 45 SHEET 1 B 7 ARG A 101 MET A 105 0 SHEET 2 B 7 SER A 264 THR A 268 -1 O THR A 268 N ARG A 101 SHEET 3 B 7 ILE A 250 SER A 253 -1 N LEU A 251 O LEU A 267 SHEET 4 B 7 LEU A 222 ASP A 226 1 N PHE A 225 O ILE A 250 SHEET 5 B 7 THR A 187 VAL A 192 1 N VAL A 190 O VAL A 224 SHEET 6 B 7 LYS A 133 PHE A 137 1 N ILE A 135 O VAL A 191 SHEET 7 B 7 ILE A 168 VAL A 171 1 O ILE A 169 N ILE A 134 SHEET 1 C 2 ILE A 195 GLN A 196 0 SHEET 2 C 2 GLN A 202 ALA A 203 -1 O GLN A 202 N GLN A 196 SHEET 1 D 4 PHE A 332 MET A 338 0 SHEET 2 D 4 LEU A 341 LEU A 346 -1 O GLY A 343 N ARG A 336 SHEET 3 D 4 VAL A 375 PHE A 378 -1 O MET A 376 N ALA A 344 SHEET 4 D 4 LEU A 369 ASN A 370 -1 N LEU A 369 O ARG A 377 SHEET 1 E 4 PRO B 28 LYS B 32 0 SHEET 2 E 4 ARG B 35 ASP B 38 -1 O TRP B 37 N VAL B 29 SHEET 3 E 4 GLU B 43 ASP B 46 -1 O TYR B 44 N VAL B 36 SHEET 4 E 4 VAL B 366 MET B 367 1 O MET B 367 N ILE B 45 SHEET 1 F 7 ARG B 101 MET B 105 0 SHEET 2 F 7 SER B 264 THR B 268 -1 O MET B 266 N LEU B 103 SHEET 3 F 7 ILE B 250 SER B 253 -1 N LEU B 251 O LEU B 267 SHEET 4 F 7 LEU B 222 ASP B 226 1 N PHE B 225 O ILE B 250 SHEET 5 F 7 THR B 187 VAL B 192 1 N VAL B 190 O VAL B 224 SHEET 6 F 7 LYS B 133 PHE B 137 1 N ILE B 135 O VAL B 191 SHEET 7 F 7 ILE B 168 VAL B 171 1 O ILE B 169 N ILE B 134 SHEET 1 G 2 ILE B 195 GLN B 196 0 SHEET 2 G 2 GLN B 202 ALA B 203 -1 O GLN B 202 N GLN B 196 SHEET 1 H 4 PHE B 332 MET B 338 0 SHEET 2 H 4 LEU B 341 LEU B 346 -1 O GLY B 343 N ARG B 336 SHEET 3 H 4 VAL B 375 PHE B 378 -1 O MET B 376 N ALA B 344 SHEET 4 H 4 LEU B 369 ASN B 370 -1 N LEU B 369 O ARG B 377 LINK C ALA A 123 N CSO A 124 1555 1555 1.33 LINK C CSO A 124 N VAL A 125 1555 1555 1.33 LINK C ALA B 123 N CSO B 124 1555 1555 1.33 LINK C CSO B 124 N VAL B 125 1555 1555 1.33 LINK O ILE A 94 NA NA A 503 1555 1555 2.29 LINK O THR A 97 NA NA A 503 1555 1555 2.46 LINK O ALA A 99 NA NA A 503 1555 1555 2.43 LINK NA NA A 503 O HOH A 794 1555 1555 2.26 LINK NA NA A 503 O HOH A 837 1555 1555 2.40 LINK NA NA A 503 O HOH A 951 1555 1555 2.46 LINK O ILE B 94 NA NA B 503 1555 1555 2.36 LINK O THR B 97 NA NA B 503 1555 1555 2.40 LINK O ALA B 99 NA NA B 503 1555 1555 2.43 LINK NA NA B 503 O HOH B 603 1555 1555 2.35 LINK NA NA B 503 O HOH B 931 1555 1555 2.32 SITE 1 AC1 19 ILE A 51 SER A 107 GLY A 108 THR A 109 SITE 2 AC1 19 ASN A 112 PHE A 141 HIS A 142 GLU A 193 SITE 3 AC1 19 GLU A 198 ASP A 226 VAL A 228 GLN A 229 SITE 4 AC1 19 LYS A 255 ARG A 377 HOH A 677 HOH A 727 SITE 5 AC1 19 HOH A 754 THR B 284 HOH B 691 SITE 1 AC2 8 LYS A 133 ILE A 168 ILE A 169 HIS A 170 SITE 2 AC2 8 HOH A 656 HOH A 713 HOH A 851 HOH A 927 SITE 1 AC3 7 ILE A 94 THR A 97 PHE A 98 ALA A 99 SITE 2 AC3 7 HOH A 794 HOH A 837 HOH A 951 SITE 1 AC4 21 THR A 284 HOH A 649 ILE B 51 SER B 107 SITE 2 AC4 21 GLY B 108 THR B 109 ASN B 112 PHE B 141 SITE 3 AC4 21 HIS B 142 GLU B 193 GLU B 198 ASP B 226 SITE 4 AC4 21 VAL B 228 GLN B 229 LYS B 255 ARG B 377 SITE 5 AC4 21 HOH B 659 HOH B 677 HOH B 685 HOH B 959 SITE 6 AC4 21 HOH B 960 SITE 1 AC5 7 LYS B 133 ILE B 168 HIS B 170 HOH B 657 SITE 2 AC5 7 HOH B 670 HOH B 755 HOH B 933 SITE 1 AC6 6 ILE B 94 THR B 97 PHE B 98 ALA B 99 SITE 2 AC6 6 HOH B 603 HOH B 931 CRYST1 96.660 111.860 65.170 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010346 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008940 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015344 0.00000