HEADER CHAPERONE 15-MAR-13 4JNF TITLE ALLOSTERIC OPENING OF THE POLYPEPTIDE-BINDING SITE WHEN AN HSP70 BINDS TITLE 2 ATP COMPND MOL_ID: 1; COMPND 2 MOLECULE: HSP70 CHAPERONE DNAK; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SUBSTRATE BINDING DOMAIN, UNP RESIDUES 389-610; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PSMT KEYWDS DNAK, CHAPERONE, 70KDA HEAT SHOCK PROTEIN (HSP70), SUBSTRATE BINDING KEYWDS 2 DOMAIN (SBD) EXPDTA X-RAY DIFFRACTION AUTHOR R.QI,E.B.SARBENG,Q.LIU,K.Q.LE,X.XU,H.XU,J.YANG,J.L.WONG,C.VORVIS, AUTHOR 2 W.A.HENDRICKSON,L.ZHOU,Q.LIU REVDAT 5 20-SEP-23 4JNF 1 SEQADV REVDAT 4 15-NOV-17 4JNF 1 REMARK REVDAT 3 07-AUG-13 4JNF 1 JRNL REVDAT 2 10-JUL-13 4JNF 1 JRNL REVDAT 1 29-MAY-13 4JNF 0 JRNL AUTH R.QI,E.B.SARBENG,Q.LIU,K.Q.LE,X.XU,H.XU,J.YANG,J.L.WONG, JRNL AUTH 2 C.VORVIS,W.A.HENDRICKSON,L.ZHOU,Q.LIU JRNL TITL ALLOSTERIC OPENING OF THE POLYPEPTIDE-BINDING SITE WHEN AN JRNL TITL 2 HSP70 BINDS ATP. JRNL REF NAT.STRUCT.MOL.BIOL. V. 20 900 2013 JRNL REFN ISSN 1545-9993 JRNL PMID 23708608 JRNL DOI 10.1038/NSMB.2583 REMARK 2 REMARK 2 RESOLUTION. 1.62 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.62 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.71 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 42464 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.640 REMARK 3 FREE R VALUE TEST SET COUNT : 1969 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.7155 - 3.9032 0.95 2982 150 0.2027 0.2384 REMARK 3 2 3.9032 - 3.0992 1.00 3013 144 0.1819 0.2071 REMARK 3 3 3.0992 - 2.7077 1.00 2964 143 0.1992 0.2203 REMARK 3 4 2.7077 - 2.4603 1.00 2951 138 0.1929 0.2265 REMARK 3 5 2.4603 - 2.2840 1.00 2963 144 0.1814 0.1909 REMARK 3 6 2.2840 - 2.1494 1.00 2925 139 0.1774 0.1916 REMARK 3 7 2.1494 - 2.0418 1.00 2895 137 0.1757 0.2110 REMARK 3 8 2.0418 - 1.9529 0.99 2914 148 0.1839 0.1886 REMARK 3 9 1.9529 - 1.8777 0.99 2894 141 0.1675 0.1764 REMARK 3 10 1.8777 - 1.8129 0.99 2832 139 0.1838 0.2132 REMARK 3 11 1.8129 - 1.7563 0.99 2880 142 0.1969 0.1966 REMARK 3 12 1.7563 - 1.7061 0.98 2853 136 0.2152 0.2700 REMARK 3 13 1.7061 - 1.6612 0.97 2813 139 0.2436 0.2651 REMARK 3 14 1.6612 - 1.6206 0.91 2616 129 0.2299 0.2562 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.38 REMARK 3 B_SOL : 46.00 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.340 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1621 REMARK 3 ANGLE : 0.844 2183 REMARK 3 CHIRALITY : 0.055 259 REMARK 3 PLANARITY : 0.003 289 REMARK 3 DIHEDRAL : 13.864 621 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 388:421) REMARK 3 ORIGIN FOR THE GROUP (A): 19.2011 22.8646 19.7264 REMARK 3 T TENSOR REMARK 3 T11: 0.2035 T22: 0.1473 REMARK 3 T33: 0.1049 T12: 0.1158 REMARK 3 T13: 0.0318 T23: 0.0478 REMARK 3 L TENSOR REMARK 3 L11: 0.0336 L22: 0.1993 REMARK 3 L33: 0.1718 L12: 0.0323 REMARK 3 L13: 0.0278 L23: -0.0203 REMARK 3 S TENSOR REMARK 3 S11: -0.0688 S12: -0.0615 S13: -0.0343 REMARK 3 S21: 0.0655 S22: -0.0203 S23: -0.0421 REMARK 3 S31: 0.0673 S32: -0.0324 S33: -0.2448 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 422:455) REMARK 3 ORIGIN FOR THE GROUP (A): 10.9543 26.8268 11.8997 REMARK 3 T TENSOR REMARK 3 T11: 0.1851 T22: 0.1564 REMARK 3 T33: 0.1279 T12: 0.0697 REMARK 3 T13: 0.0248 T23: 0.0056 REMARK 3 L TENSOR REMARK 3 L11: 0.0585 L22: 0.4132 REMARK 3 L33: 0.9722 L12: -0.0128 REMARK 3 L13: -0.0487 L23: -0.2037 REMARK 3 S TENSOR REMARK 3 S11: 0.0258 S12: 0.0446 S13: -0.0914 REMARK 3 S21: 0.0566 S22: 0.0052 S23: 0.1735 REMARK 3 S31: 0.0302 S32: -0.1792 S33: 0.2422 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 456:464) REMARK 3 ORIGIN FOR THE GROUP (A): -3.7348 25.6311 13.4005 REMARK 3 T TENSOR REMARK 3 T11: 0.1859 T22: 0.3348 REMARK 3 T33: 0.4424 T12: 0.0140 REMARK 3 T13: -0.0412 T23: -0.0268 REMARK 3 L TENSOR REMARK 3 L11: 0.0101 L22: 0.0039 REMARK 3 L33: 0.0087 L12: -0.0062 REMARK 3 L13: 0.0099 L23: -0.0060 REMARK 3 S TENSOR REMARK 3 S11: -0.0560 S12: 0.0226 S13: 0.0916 REMARK 3 S21: -0.0814 S22: -0.0749 S23: 0.1583 REMARK 3 S31: -0.0123 S32: -0.3024 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 465:489) REMARK 3 ORIGIN FOR THE GROUP (A): 5.0688 24.9931 22.0932 REMARK 3 T TENSOR REMARK 3 T11: 0.2695 T22: 0.2071 REMARK 3 T33: 0.2317 T12: 0.0978 REMARK 3 T13: 0.0980 T23: 0.0549 REMARK 3 L TENSOR REMARK 3 L11: 0.3370 L22: 0.2563 REMARK 3 L33: 0.1771 L12: 0.1677 REMARK 3 L13: 0.2235 L23: 0.1565 REMARK 3 S TENSOR REMARK 3 S11: -0.0348 S12: -0.2593 S13: 0.1378 REMARK 3 S21: 0.3698 S22: 0.0546 S23: 0.2309 REMARK 3 S31: -0.1136 S32: -0.2543 S33: 0.0488 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 490:496) REMARK 3 ORIGIN FOR THE GROUP (A): -5.3060 27.6988 22.7046 REMARK 3 T TENSOR REMARK 3 T11: 0.2457 T22: 0.4017 REMARK 3 T33: 0.6200 T12: 0.0801 REMARK 3 T13: 0.1529 T23: 0.0853 REMARK 3 L TENSOR REMARK 3 L11: 0.0299 L22: 0.0997 REMARK 3 L33: 0.0654 L12: -0.0004 REMARK 3 L13: 0.0362 L23: 0.0240 REMARK 3 S TENSOR REMARK 3 S11: 0.0230 S12: -0.0597 S13: 0.0755 REMARK 3 S21: 0.0014 S22: -0.0426 S23: 0.0126 REMARK 3 S31: -0.0181 S32: -0.0536 S33: -0.0464 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 497:520) REMARK 3 ORIGIN FOR THE GROUP (A): 20.1328 17.5509 10.8617 REMARK 3 T TENSOR REMARK 3 T11: 0.2767 T22: 0.1943 REMARK 3 T33: 0.2342 T12: 0.2222 REMARK 3 T13: 0.0956 T23: 0.0329 REMARK 3 L TENSOR REMARK 3 L11: 1.3089 L22: 0.3025 REMARK 3 L33: 0.7202 L12: -0.5614 REMARK 3 L13: -0.1493 L23: 0.2548 REMARK 3 S TENSOR REMARK 3 S11: -0.1348 S12: -0.0688 S13: -0.5188 REMARK 3 S21: 0.0358 S22: -0.0405 S23: 0.2357 REMARK 3 S31: 0.5595 S32: 0.1315 S33: 0.2326 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 521:549) REMARK 3 ORIGIN FOR THE GROUP (A): 10.5887 42.4766 7.7344 REMARK 3 T TENSOR REMARK 3 T11: 0.1978 T22: 0.1327 REMARK 3 T33: 0.1202 T12: 0.0826 REMARK 3 T13: 0.0544 T23: 0.0177 REMARK 3 L TENSOR REMARK 3 L11: 0.7029 L22: 0.7929 REMARK 3 L33: 0.5448 L12: 0.3149 REMARK 3 L13: -0.0702 L23: 0.0861 REMARK 3 S TENSOR REMARK 3 S11: 0.0487 S12: -0.0656 S13: 0.1771 REMARK 3 S21: 0.0748 S22: 0.0361 S23: 0.2181 REMARK 3 S31: -0.1223 S32: 0.0488 S33: -0.0028 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 550:558) REMARK 3 ORIGIN FOR THE GROUP (A): -12.2180 56.5995 10.5129 REMARK 3 T TENSOR REMARK 3 T11: 0.3559 T22: 0.3517 REMARK 3 T33: 0.6005 T12: 0.2218 REMARK 3 T13: 0.1246 T23: 0.0339 REMARK 3 L TENSOR REMARK 3 L11: 0.1363 L22: 0.0736 REMARK 3 L33: 0.2368 L12: -0.0953 REMARK 3 L13: -0.0564 L23: 0.0017 REMARK 3 S TENSOR REMARK 3 S11: 0.0054 S12: -0.0173 S13: -0.0297 REMARK 3 S21: -0.0032 S22: -0.0190 S23: 0.0362 REMARK 3 S31: 0.0131 S32: -0.0270 S33: 0.0234 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 559:579) REMARK 3 ORIGIN FOR THE GROUP (A): 1.4034 54.8814 2.1733 REMARK 3 T TENSOR REMARK 3 T11: 0.2976 T22: 0.1584 REMARK 3 T33: 0.2335 T12: 0.2822 REMARK 3 T13: 0.0796 T23: 0.0358 REMARK 3 L TENSOR REMARK 3 L11: 0.0785 L22: 0.5551 REMARK 3 L33: 0.1319 L12: 0.0986 REMARK 3 L13: 0.0264 L23: 0.0612 REMARK 3 S TENSOR REMARK 3 S11: 0.0242 S12: 0.0652 S13: 0.0991 REMARK 3 S21: -0.0129 S22: 0.0197 S23: 0.3991 REMARK 3 S31: -0.2907 S32: -0.2406 S33: 0.1189 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN A AND RESID 580:604) REMARK 3 ORIGIN FOR THE GROUP (A): 3.2817 56.1784 11.8714 REMARK 3 T TENSOR REMARK 3 T11: 0.3415 T22: 0.1856 REMARK 3 T33: 0.2250 T12: 0.1910 REMARK 3 T13: 0.1479 T23: 0.0603 REMARK 3 L TENSOR REMARK 3 L11: 0.2476 L22: 0.0282 REMARK 3 L33: 0.0312 L12: 0.0816 REMARK 3 L13: 0.0867 L23: 0.0291 REMARK 3 S TENSOR REMARK 3 S11: -0.0078 S12: -0.3014 S13: 0.0628 REMARK 3 S21: 0.3455 S22: 0.1566 S23: 0.3925 REMARK 3 S31: -0.3608 S32: -0.2700 S33: 0.0767 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4JNF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-MAR-13. REMARK 100 THE DEPOSITION ID IS D_1000078265. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-AUG-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42873 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.620 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.62 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.65 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1DKX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0 M AMMONIUM SULFATE, 0.1 M TRIS REMARK 280 -HCL, PH 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.91967 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 85.83933 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 85.83933 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 42.91967 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 984 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 605 REMARK 465 HIS A 606 REMARK 465 ALA A 607 REMARK 465 GLN A 608 REMARK 465 GLN A 609 REMARK 465 GLN A 610 REMARK 465 HIS A 611 REMARK 465 ALA A 612 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 495 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 467 15.78 59.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1DKZ RELATED DB: PDB REMARK 900 SUBSTRATE BINDING DOMAIN OF DNAK WITH A SUBSTRATE PEPTIDE REMARK 900 RELATED ID: 4JN4 RELATED DB: PDB REMARK 900 RELATED ID: 4JNE RELATED DB: PDB DBREF 4JNF A 389 610 UNP P0A6Y8 DNAK_ECOLI 389 610 SEQADV 4JNF SER A 388 UNP P0A6Y8 EXPRESSION TAG SEQADV 4JNF A UNP P0A6Y8 THR 428 DELETION SEQADV 4JNF A UNP P0A6Y8 ALA 429 DELETION SEQADV 4JNF A UNP P0A6Y8 GLU 430 DELETION SEQADV 4JNF A UNP P0A6Y8 ASP 431 DELETION SEQADV 4JNF MET A 428 UNP P0A6Y8 ASN 432 ENGINEERED MUTATION SEQADV 4JNF GLY A 429 UNP P0A6Y8 GLN 433 ENGINEERED MUTATION SEQADV 4JNF GLY A 430 UNP P0A6Y8 SER 434 ENGINEERED MUTATION SEQADV 4JNF HIS A 611 UNP P0A6Y8 EXPRESSION TAG SEQADV 4JNF ALA A 612 UNP P0A6Y8 EXPRESSION TAG SEQRES 1 A 221 SER VAL LEU LEU LEU ASP VAL THR PRO LEU SER LEU GLY SEQRES 2 A 221 ILE GLU THR MET GLY GLY VAL MET THR THR LEU ILE ALA SEQRES 3 A 221 LYS ASN THR THR ILE PRO THR LYS HIS SER GLN VAL PHE SEQRES 4 A 221 SER MET GLY GLY ALA VAL THR ILE HIS VAL LEU GLN GLY SEQRES 5 A 221 GLU ARG LYS ARG ALA ALA ASP ASN LYS SER LEU GLY GLN SEQRES 6 A 221 PHE ASN LEU ASP GLY ILE ASN PRO ALA PRO ARG GLY MET SEQRES 7 A 221 PRO GLN ILE GLU VAL THR PHE ASP ILE ASP ALA ASP GLY SEQRES 8 A 221 ILE LEU HIS VAL SER ALA LYS ASP LYS ASN SER GLY LYS SEQRES 9 A 221 GLU GLN LYS ILE THR ILE LYS ALA SER SER GLY LEU ASN SEQRES 10 A 221 GLU ASP GLU ILE GLN LYS MET VAL ARG ASP ALA GLU ALA SEQRES 11 A 221 ASN ALA GLU ALA ASP ARG LYS PHE GLU GLU LEU VAL GLN SEQRES 12 A 221 THR ARG ASN GLN GLY ASP HIS LEU LEU HIS SER THR ARG SEQRES 13 A 221 LYS GLN VAL GLU GLU ALA GLY ASP LYS LEU PRO ALA ASP SEQRES 14 A 221 ASP LYS THR ALA ILE GLU SER ALA LEU THR ALA LEU GLU SEQRES 15 A 221 THR ALA LEU LYS GLY GLU ASP LYS ALA ALA ILE GLU ALA SEQRES 16 A 221 LYS MET GLN GLU LEU ALA GLN VAL SER GLN LYS LEU MET SEQRES 17 A 221 GLU ILE ALA GLN GLN GLN HIS ALA GLN GLN GLN HIS ALA FORMUL 2 HOH *321(H2 O) HELIX 1 1 ARG A 447 ASN A 451 5 5 HELIX 2 2 ALA A 465 MET A 469 5 5 HELIX 3 3 LYS A 502 GLY A 506 5 5 HELIX 4 4 ASN A 508 ASN A 522 1 15 HELIX 5 5 ASN A 522 GLY A 554 1 33 HELIX 6 6 ASP A 555 LEU A 557 5 3 HELIX 7 7 PRO A 558 LYS A 577 1 20 HELIX 8 8 ASP A 580 VAL A 594 1 15 HELIX 9 9 SER A 595 GLN A 604 1 10 SHEET 1 A 4 VAL A 407 ILE A 412 0 SHEET 2 A 4 LEU A 399 THR A 403 -1 N LEU A 399 O LEU A 411 SHEET 3 A 4 VAL A 436 GLN A 442 -1 O LEU A 441 N GLY A 400 SHEET 4 A 4 LYS A 452 LEU A 459 -1 O PHE A 457 N ILE A 438 SHEET 1 B 4 THR A 420 PHE A 426 0 SHEET 2 B 4 ILE A 472 ILE A 478 -1 O PHE A 476 N HIS A 422 SHEET 3 B 4 LEU A 484 ASP A 490 -1 O HIS A 485 N ASP A 477 SHEET 4 B 4 GLU A 496 THR A 500 -1 O ILE A 499 N VAL A 486 CISPEP 1 ILE A 418 PRO A 419 0 0.61 CRYST1 66.980 66.980 128.759 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014930 0.008620 0.000000 0.00000 SCALE2 0.000000 0.017239 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007766 0.00000