HEADER TRANSPORT PROTEIN 15-MAR-13 4JNV TITLE CRYSTAL STRUCTURE OF THE HUMAN NUP57CCS3* COILED-COIL SEGMENT, SPACE TITLE 2 GROUP C2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOPORIN P54; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: UNP RESIDUES 453-491; COMPND 5 SYNONYM: NUP54, 54 KDA NUCLEOPORIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NUP54; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEOCYTOPLASMIC TRANSPORT, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.STUWE,C.J.BLEY,D.J.MAYO,A.HOELZ REVDAT 4 16-OCT-24 4JNV 1 SEQADV LINK REVDAT 3 03-FEB-16 4JNV 1 JRNL REVDAT 2 02-SEP-15 4JNV 1 TITLE REVDAT 1 17-SEP-14 4JNV 0 JRNL AUTH T.STUWE,C.J.BLEY,K.THIERBACH,S.PETROVIC,S.SCHILBACH, JRNL AUTH 2 D.J.MAYO,T.PERRICHES,E.J.RUNDLET,Y.E.JEON,L.N.COLLINS, JRNL AUTH 3 F.M.HUBER,D.H.LIN,M.PADUCH,A.KOIDE,V.LU,J.FISCHER,E.HURT, JRNL AUTH 4 S.KOIDE,A.A.KOSSIAKOFF,A.HOELZ JRNL TITL ARCHITECTURE OF THE FUNGAL NUCLEAR PORE INNER RING COMPLEX. JRNL REF SCIENCE V. 350 56 2015 JRNL REFN ISSN 0036-8075 JRNL PMID 26316600 JRNL DOI 10.1126/SCIENCE.AAC9176 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8_1069 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 13157 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.241 REMARK 3 R VALUE (WORKING SET) : 0.237 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.930 REMARK 3 FREE R VALUE TEST SET COUNT : 2508 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.8154 - 4.8257 0.96 1269 137 0.2614 0.2981 REMARK 3 2 4.8257 - 3.8394 0.96 1265 139 0.2122 0.2415 REMARK 3 3 3.8394 - 3.3568 0.99 1272 140 0.2517 0.2829 REMARK 3 4 3.3568 - 3.0511 0.95 1232 137 0.2381 0.2761 REMARK 3 5 3.0511 - 2.8330 0.98 1283 136 0.2361 0.2874 REMARK 3 6 2.8330 - 2.6664 0.99 1303 150 0.2248 0.2549 REMARK 3 7 2.6664 - 2.5332 0.98 1294 143 0.2198 0.2773 REMARK 3 8 2.5332 - 2.4231 0.96 1236 138 0.2328 0.2715 REMARK 3 9 2.4231 - 2.3300 0.97 1257 140 0.2203 0.2709 REMARK 3 10 2.3300 - 2.2497 0.98 1284 142 0.2243 0.2812 REMARK 3 11 2.2497 - 2.1794 0.99 1297 141 0.2162 0.3022 REMARK 3 12 2.1794 - 2.1172 0.98 1300 141 0.2210 0.2773 REMARK 3 13 2.1172 - 2.0615 0.98 1288 141 0.2331 0.3201 REMARK 3 14 2.0615 - 2.0113 0.94 1210 138 0.2315 0.2710 REMARK 3 15 2.0113 - 1.9656 0.97 1250 135 0.2607 0.2857 REMARK 3 16 1.9656 - 1.9238 0.97 1258 138 0.2539 0.2533 REMARK 3 17 1.9238 - 1.8854 0.96 1284 146 0.2970 0.3289 REMARK 3 18 1.8854 - 1.8500 0.89 1176 126 0.3035 0.3248 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.580 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.69 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 1092 REMARK 3 ANGLE : 0.924 1458 REMARK 3 CHIRALITY : 0.054 168 REMARK 3 PLANARITY : 0.004 184 REMARK 3 DIHEDRAL : 19.243 438 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 451 THROUGH 455 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.0401 14.6836 29.3605 REMARK 3 T TENSOR REMARK 3 T11: 0.1953 T22: -0.0176 REMARK 3 T33: 0.3206 T12: -0.0251 REMARK 3 T13: -0.0242 T23: -0.0042 REMARK 3 L TENSOR REMARK 3 L11: 0.4823 L22: 2.5619 REMARK 3 L33: 1.5746 L12: 1.0049 REMARK 3 L13: -0.3682 L23: -0.9362 REMARK 3 S TENSOR REMARK 3 S11: -0.0065 S12: 0.0214 S13: 0.0245 REMARK 3 S21: -0.1000 S22: -0.0126 S23: -0.3194 REMARK 3 S31: -0.0476 S32: 0.1143 S33: 0.0121 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 456 THROUGH 481 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.5661 5.2277 19.8884 REMARK 3 T TENSOR REMARK 3 T11: 0.3105 T22: 0.2923 REMARK 3 T33: 0.3931 T12: 0.1167 REMARK 3 T13: -0.1273 T23: -0.1921 REMARK 3 L TENSOR REMARK 3 L11: 1.6858 L22: 1.3386 REMARK 3 L33: 2.1181 L12: -0.0691 REMARK 3 L13: 0.8294 L23: 0.7639 REMARK 3 S TENSOR REMARK 3 S11: 0.1949 S12: 0.4002 S13: -0.3585 REMARK 3 S21: -0.0948 S22: -0.1396 S23: 0.4157 REMARK 3 S31: 0.1926 S32: -0.2408 S33: 0.1737 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 457 THROUGH 466 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.6725 10.7860 12.1056 REMARK 3 T TENSOR REMARK 3 T11: 0.1924 T22: 0.6260 REMARK 3 T33: 0.2588 T12: -0.1520 REMARK 3 T13: -0.1527 T23: -0.0750 REMARK 3 L TENSOR REMARK 3 L11: 2.9970 L22: 4.1330 REMARK 3 L33: 3.9177 L12: 2.6661 REMARK 3 L13: 3.3499 L23: 3.5294 REMARK 3 S TENSOR REMARK 3 S11: 0.0927 S12: -0.5807 S13: 0.0729 REMARK 3 S21: 0.1323 S22: -0.3455 S23: 0.4510 REMARK 3 S31: 0.0134 S32: -0.7526 S33: 0.2013 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 467 THROUGH 481 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.4293 15.1367 22.0793 REMARK 3 T TENSOR REMARK 3 T11: 0.0413 T22: 0.1121 REMARK 3 T33: 0.0637 T12: -0.0176 REMARK 3 T13: -0.0208 T23: 0.0341 REMARK 3 L TENSOR REMARK 3 L11: 3.5009 L22: 1.3535 REMARK 3 L33: 1.8245 L12: 0.8540 REMARK 3 L13: 1.0018 L23: 0.3773 REMARK 3 S TENSOR REMARK 3 S11: -0.0315 S12: 0.2113 S13: 0.1153 REMARK 3 S21: -0.0450 S22: 0.1241 S23: 0.2611 REMARK 3 S31: 0.0434 S32: -0.3937 S33: -0.0074 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 482 THROUGH 490 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.4960 18.5255 31.3342 REMARK 3 T TENSOR REMARK 3 T11: 0.1874 T22: 0.1356 REMARK 3 T33: 0.2083 T12: -0.0172 REMARK 3 T13: 0.0118 T23: -0.0215 REMARK 3 L TENSOR REMARK 3 L11: 2.0411 L22: 2.3749 REMARK 3 L33: 3.2737 L12: -1.1810 REMARK 3 L13: 1.8694 L23: 0.2040 REMARK 3 S TENSOR REMARK 3 S11: -0.0690 S12: -0.0527 S13: 0.2042 REMARK 3 S21: 0.1548 S22: -0.0054 S23: -0.0454 REMARK 3 S31: -0.0760 S32: -0.1155 S33: 0.0717 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 451 THROUGH 455 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.0988 7.0321 33.2677 REMARK 3 T TENSOR REMARK 3 T11: 0.0809 T22: -0.1732 REMARK 3 T33: 0.2155 T12: 0.0174 REMARK 3 T13: 0.0501 T23: -0.1109 REMARK 3 L TENSOR REMARK 3 L11: 0.6984 L22: 2.8230 REMARK 3 L33: 3.8836 L12: -0.1864 REMARK 3 L13: 0.3256 L23: -2.8555 REMARK 3 S TENSOR REMARK 3 S11: -0.0294 S12: -0.0642 S13: 0.0535 REMARK 3 S21: 0.2552 S22: 0.0090 S23: 0.0090 REMARK 3 S31: -0.1433 S32: -0.0166 S33: 0.0108 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 456 THROUGH 482 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.4167 17.3202 13.8384 REMARK 3 T TENSOR REMARK 3 T11: 0.3626 T22: 0.7613 REMARK 3 T33: 0.0337 T12: -0.2461 REMARK 3 T13: -0.0836 T23: 0.0695 REMARK 3 L TENSOR REMARK 3 L11: 4.5666 L22: 1.3443 REMARK 3 L33: 3.6011 L12: -0.2220 REMARK 3 L13: 3.9263 L23: -0.0760 REMARK 3 S TENSOR REMARK 3 S11: 0.0050 S12: 0.7323 S13: 0.0442 REMARK 3 S21: -0.1362 S22: 0.4936 S23: 0.0040 REMARK 3 S31: 0.0127 S32: -0.1930 S33: 0.1185 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 460 THROUGH 485 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.1284 6.8821 10.9616 REMARK 3 T TENSOR REMARK 3 T11: 0.4067 T22: 0.7358 REMARK 3 T33: 0.2706 T12: 0.2764 REMARK 3 T13: 0.0416 T23: -0.0751 REMARK 3 L TENSOR REMARK 3 L11: 5.9984 L22: 0.2279 REMARK 3 L33: 3.7643 L12: 0.1013 REMARK 3 L13: 4.7456 L23: 0.0636 REMARK 3 S TENSOR REMARK 3 S11: 0.0023 S12: 0.6799 S13: -0.0029 REMARK 3 S21: -0.1797 S22: 0.0602 S23: -0.1917 REMARK 3 S31: -0.0841 S32: 0.0661 S33: -0.0031 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 486 THROUGH 490 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.8024 4.5798 30.4782 REMARK 3 T TENSOR REMARK 3 T11: 0.1981 T22: 0.0106 REMARK 3 T33: 0.3501 T12: 0.0458 REMARK 3 T13: 0.0785 T23: -0.0336 REMARK 3 L TENSOR REMARK 3 L11: 1.7526 L22: 6.1209 REMARK 3 L33: 4.1195 L12: -0.5030 REMARK 3 L13: 2.5351 L23: 0.9077 REMARK 3 S TENSOR REMARK 3 S11: 0.0097 S12: 0.0780 S13: 0.1311 REMARK 3 S21: -0.3615 S22: 0.0081 S23: -0.2913 REMARK 3 S31: -0.5006 S32: 0.0867 S33: 0.0015 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4JNV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-MAR-13. REMARK 100 THE DEPOSITION ID IS D_1000078281. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13158 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: AB INITIO PHASING REMARK 200 SOFTWARE USED: PHENIX 1.8_1069 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE, PH 5.3, 1.9 M REMARK 280 SODIUM FORMATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 35.25300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 18.31150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 35.25300 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 18.31150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -58.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 510 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 482 REMARK 465 ASP A 483 REMARK 465 MSE A 484 REMARK 465 GLU A 485 REMARK 465 ASP A 486 REMARK 465 ILE A 487 REMARK 465 LYS A 488 REMARK 465 LEU A 489 REMARK 465 VAL A 490 REMARK 465 SER B 451 REMARK 465 TYR B 452 REMARK 465 TYR B 453 REMARK 465 ILE B 454 REMARK 465 ASP B 455 REMARK 465 ALA B 456 REMARK 465 ASP C 483 REMARK 465 MSE C 484 REMARK 465 GLU C 485 REMARK 465 ASP C 486 REMARK 465 ILE C 487 REMARK 465 LYS C 488 REMARK 465 LEU C 489 REMARK 465 VAL C 490 REMARK 465 SER D 451 REMARK 465 TYR D 452 REMARK 465 TYR D 453 REMARK 465 ILE D 454 REMARK 465 ASP D 455 REMARK 465 ALA D 456 REMARK 465 ASP D 457 REMARK 465 LEU D 458 REMARK 465 LEU D 459 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4JNU RELATED DB: PDB REMARK 900 RELATED ID: 4JO7 RELATED DB: PDB REMARK 900 RELATED ID: 4JO9 RELATED DB: PDB REMARK 900 RELATED ID: 4JQ5 RELATED DB: PDB DBREF 4JNV A 452 490 UNP Q7Z3B4 NUP54_HUMAN 453 491 DBREF 4JNV B 452 490 UNP Q7Z3B4 NUP54_HUMAN 453 491 DBREF 4JNV C 452 490 UNP Q7Z3B4 NUP54_HUMAN 453 491 DBREF 4JNV D 452 490 UNP Q7Z3B4 NUP54_HUMAN 453 491 SEQADV 4JNV SER A 451 UNP Q7Z3B4 EXPRESSION TAG SEQADV 4JNV MSE A 484 UNP Q7Z3B4 LEU 485 CONFLICT SEQADV 4JNV SER B 451 UNP Q7Z3B4 EXPRESSION TAG SEQADV 4JNV MSE B 484 UNP Q7Z3B4 LEU 485 CONFLICT SEQADV 4JNV SER C 451 UNP Q7Z3B4 EXPRESSION TAG SEQADV 4JNV MSE C 484 UNP Q7Z3B4 LEU 485 CONFLICT SEQADV 4JNV SER D 451 UNP Q7Z3B4 EXPRESSION TAG SEQADV 4JNV MSE D 484 UNP Q7Z3B4 LEU 485 CONFLICT SEQRES 1 A 40 SER TYR TYR ILE ASP ALA ASP LEU LEU ARG GLU ILE LYS SEQRES 2 A 40 GLN HIS LEU LYS GLN GLN GLN GLU GLY LEU SER HIS LEU SEQRES 3 A 40 ILE SER ILE ILE LYS ASP ASP MSE GLU ASP ILE LYS LEU SEQRES 4 A 40 VAL SEQRES 1 B 40 SER TYR TYR ILE ASP ALA ASP LEU LEU ARG GLU ILE LYS SEQRES 2 B 40 GLN HIS LEU LYS GLN GLN GLN GLU GLY LEU SER HIS LEU SEQRES 3 B 40 ILE SER ILE ILE LYS ASP ASP MSE GLU ASP ILE LYS LEU SEQRES 4 B 40 VAL SEQRES 1 C 40 SER TYR TYR ILE ASP ALA ASP LEU LEU ARG GLU ILE LYS SEQRES 2 C 40 GLN HIS LEU LYS GLN GLN GLN GLU GLY LEU SER HIS LEU SEQRES 3 C 40 ILE SER ILE ILE LYS ASP ASP MSE GLU ASP ILE LYS LEU SEQRES 4 C 40 VAL SEQRES 1 D 40 SER TYR TYR ILE ASP ALA ASP LEU LEU ARG GLU ILE LYS SEQRES 2 D 40 GLN HIS LEU LYS GLN GLN GLN GLU GLY LEU SER HIS LEU SEQRES 3 D 40 ILE SER ILE ILE LYS ASP ASP MSE GLU ASP ILE LYS LEU SEQRES 4 D 40 VAL MODRES 4JNV MSE B 484 MET SELENOMETHIONINE MODRES 4JNV MSE D 484 MET SELENOMETHIONINE HET MSE B 484 17 HET MSE D 484 17 HETNAM MSE SELENOMETHIONINE FORMUL 2 MSE 2(C5 H11 N O2 SE) FORMUL 5 HOH *22(H2 O) HELIX 1 1 ALA A 456 LYS A 481 1 26 HELIX 2 2 LEU B 458 MSE B 484 1 27 HELIX 3 3 ALA C 456 ASP C 482 1 27 HELIX 4 4 ILE D 462 MSE D 484 1 23 SHEET 1 A 4 LYS B 488 LEU B 489 0 SHEET 2 A 4 TYR A 452 ASP A 455 -1 N TYR A 453 O LYS B 488 SHEET 3 A 4 TYR C 452 ASP C 455 -1 O ILE C 454 N ILE A 454 SHEET 4 A 4 LYS D 488 LEU D 489 -1 O LYS D 488 N TYR C 453 LINK C ASP B 483 N MSE B 484 1555 1555 1.33 LINK C MSE B 484 N GLU B 485 1555 1555 1.33 LINK C ASP D 483 N MSE D 484 1555 1555 1.33 LINK C MSE D 484 N GLU D 485 1555 1555 1.33 CRYST1 70.506 36.623 63.179 90.00 104.39 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014183 0.000000 0.003640 0.00000 SCALE2 0.000000 0.027305 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016341 0.00000