HEADER CELLULOSE BINDING PROTEIN 16-MAR-13 4JO5 TITLE CBM3A-L DOMAIN WITH FLANKING LINKERS FROM SCAFFOLDIN CIPA OF TITLE 2 CELLULOSOME OF CLOSTRIDIUM THERMOCELLUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELLULOSOME ANCHORING PROTEIN COHESIN REGION; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 351-540; COMPND 5 SYNONYM: CBM3A-L; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM THERMOCELLUM; SOURCE 3 ORGANISM_TAXID: 1094188; SOURCE 4 STRAIN: YS; SOURCE 5 GENE: CIPA, YSBL_2973; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 KEYWDS CBM, SCAFFOLDING, CELLULOSE BINDING, BETA SANDWICH, THERMOPHILE, CIPA KEYWDS 2 MODULE, CELLULOSE BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR L.J.W.SHIMON,F.FROLOW,E.A.BAYER,O.YANIV,R.LAMED,E.MORAG REVDAT 3 20-SEP-23 4JO5 1 REMARK LINK REVDAT 2 05-FEB-14 4JO5 1 JRNL REVDAT 1 17-JUL-13 4JO5 0 JRNL AUTH O.YANIV,E.MORAG,I.BOROVOK,E.A.BAYER,R.LAMED,F.FROLOW, JRNL AUTH 2 L.J.SHIMON JRNL TITL STRUCTURE OF A FAMILY 3A CARBOHYDRATE-BINDING MODULE FROM JRNL TITL 2 THE CELLULOSOMAL SCAFFOLDIN CIPA OF CLOSTRIDIUM THERMOCELLUM JRNL TITL 3 WITH FLANKING LINKERS: IMPLICATIONS FOR CELLULOSOME JRNL TITL 4 STRUCTURE. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 69 733 2013 JRNL REFN ESSN 1744-3091 JRNL PMID 23832198 JRNL DOI 10.1107/S174430911301614X REMARK 2 REMARK 2 RESOLUTION. 1.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1389 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 15806 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 790 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.1360 - 3.5953 1.00 2715 139 0.1710 0.1891 REMARK 3 2 3.5953 - 2.8545 1.00 2531 146 0.1485 0.1899 REMARK 3 3 2.8545 - 2.4939 1.00 2488 145 0.1602 0.2260 REMARK 3 4 2.4939 - 2.2660 0.99 2487 113 0.1733 0.2549 REMARK 3 5 2.2660 - 2.1036 1.00 2453 131 0.2034 0.2747 REMARK 3 6 2.1036 - 1.9800 0.95 2342 116 0.2470 0.3452 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.440 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.41 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 1380 REMARK 3 ANGLE : 1.337 1880 REMARK 3 CHIRALITY : 0.092 202 REMARK 3 PLANARITY : 0.005 244 REMARK 3 DIHEDRAL : 14.535 474 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -16.2353 10.6183 -0.9061 REMARK 3 T TENSOR REMARK 3 T11: 0.1666 T22: 0.2739 REMARK 3 T33: 0.2301 T12: -0.0149 REMARK 3 T13: -0.0438 T23: -0.0333 REMARK 3 L TENSOR REMARK 3 L11: 1.3478 L22: 1.0147 REMARK 3 L33: 0.5794 L12: -0.2373 REMARK 3 L13: -0.6505 L23: -0.3227 REMARK 3 S TENSOR REMARK 3 S11: -0.0284 S12: 0.1056 S13: -0.0161 REMARK 3 S21: -0.0066 S22: 0.0826 S23: 0.1030 REMARK 3 S31: 0.0678 S32: -0.0968 S33: 0.0037 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4JO5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-MAR-13. REMARK 100 THE DEPOSITION ID IS D_1000078291. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUN-06 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9725 REMARK 200 MONOCHROMATOR : CHANNEL CUT SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16044 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.980 REMARK 200 RESOLUTION RANGE LOW (A) : 77.078 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 25.00 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 34.5100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1NCB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.275 M AMMONIUM SULFATE, 0.085 M REMARK 280 TRIS, PH 8.5, 25.2% V/V GLYCEROL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+3/4,X+1/4,-Z+1/4 REMARK 290 14555 -Y+3/4,-X+3/4,-Z+3/4 REMARK 290 15555 Y+1/4,-X+1/4,Z+3/4 REMARK 290 16555 -Y+1/4,X+3/4,Z+1/4 REMARK 290 17555 X+3/4,Z+1/4,-Y+1/4 REMARK 290 18555 -X+1/4,Z+3/4,Y+1/4 REMARK 290 19555 -X+3/4,-Z+3/4,-Y+3/4 REMARK 290 20555 X+1/4,-Z+1/4,Y+3/4 REMARK 290 21555 Z+3/4,Y+1/4,-X+1/4 REMARK 290 22555 Z+1/4,-Y+1/4,X+3/4 REMARK 290 23555 -Z+1/4,Y+3/4,X+1/4 REMARK 290 24555 -Z+3/4,-Y+3/4,-X+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 54.50250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.50250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.50250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.50250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 54.50250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.50250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 54.50250 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 54.50250 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 54.50250 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 54.50250 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 54.50250 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 54.50250 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 54.50250 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 54.50250 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 54.50250 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 54.50250 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 54.50250 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 54.50250 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 81.75375 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 27.25125 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 27.25125 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 81.75375 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 81.75375 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 81.75375 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 27.25125 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 27.25125 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 81.75375 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 27.25125 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 81.75375 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 27.25125 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 81.75375 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 27.25125 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 27.25125 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 27.25125 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 81.75375 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 27.25125 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 81.75375 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 81.75375 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 81.75375 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 27.25125 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 27.25125 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 81.75375 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 81.75375 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 27.25125 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 27.25125 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 27.25125 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 27.25125 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 81.75375 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 27.25125 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 81.75375 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 27.25125 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 81.75375 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 81.75375 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 81.75375 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 N1 1MZ A 208 LIES ON A SPECIAL POSITION. REMARK 375 CM1 1MZ A 208 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 405 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 1 REMARK 465 PRO A 2 REMARK 465 THR A 3 REMARK 465 ASN A 4 REMARK 465 THR A 5 REMARK 465 PRO A 6 REMARK 465 THR A 7 REMARK 465 ASN A 8 REMARK 465 THR A 9 REMARK 465 PRO A 10 REMARK 465 ALA A 11 REMARK 465 PRO A 182 REMARK 465 VAL A 183 REMARK 465 THR A 184 REMARK 465 THR A 185 REMARK 465 PRO A 186 REMARK 465 PRO A 187 REMARK 465 ALA A 188 REMARK 465 THR A 189 REMARK 465 THR A 190 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 355 O HOH A 362 2.05 REMARK 500 O HOH A 355 O HOH A 378 2.12 REMARK 500 O HOH A 383 O HOH A 389 2.13 REMARK 500 O HOH A 364 O HOH A 379 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 391 O HOH A 391 14444 2.00 REMARK 500 O HOH A 385 O HOH A 416 14444 2.13 REMARK 500 O HOH A 376 O HOH A 441 5555 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 63 61.14 61.36 REMARK 500 SER A 179 -6.40 78.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 61 OG1 REMARK 620 2 THR A 61 O 73.2 REMARK 620 3 ASP A 63 OD2 121.2 77.4 REMARK 620 4 ASP A 63 OD1 73.9 77.7 50.6 REMARK 620 5 THR A 139 O 137.7 149.0 85.0 110.2 REMARK 620 6 ASN A 142 OD1 69.2 141.8 117.0 85.6 69.2 REMARK 620 7 ASP A 143 OD1 76.7 92.5 154.3 150.5 92.6 85.5 REMARK 620 8 HOH A 310 O 138.5 76.1 77.3 125.5 75.2 139.5 77.4 REMARK 620 N 1 2 3 4 5 6 7 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1MZ A 208 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1NBC RELATED DB: PDB REMARK 900 RELATED ID: 1ANU RELATED DB: PDB DBREF 4JO5 A 1 190 UNP H8ERY3 H8ERY3_CLOTM 351 540 SEQRES 1 A 190 VAL PRO THR ASN THR PRO THR ASN THR PRO ALA ASN THR SEQRES 2 A 190 PRO VAL SER GLY ASN LEU LYS VAL GLU PHE TYR ASN SER SEQRES 3 A 190 ASN PRO SER ASP THR THR ASN SER ILE ASN PRO GLN PHE SEQRES 4 A 190 LYS VAL THR ASN THR GLY SER SER ALA ILE ASP LEU SER SEQRES 5 A 190 LYS LEU THR LEU ARG TYR TYR TYR THR VAL ASP GLY GLN SEQRES 6 A 190 LYS ASP GLN THR PHE TRP CYS ASP HIS ALA ALA ILE ILE SEQRES 7 A 190 GLY SER ASN GLY SER TYR ASN GLY ILE THR SER ASN VAL SEQRES 8 A 190 LYS GLY THR PHE VAL LYS MET SER SER SER THR ASN ASN SEQRES 9 A 190 ALA ASP THR TYR LEU GLU ILE SER PHE THR GLY GLY THR SEQRES 10 A 190 LEU GLU PRO GLY ALA HIS VAL GLN ILE GLN GLY ARG PHE SEQRES 11 A 190 ALA LYS ASN ASP TRP SER ASN TYR THR GLN SER ASN ASP SEQRES 12 A 190 TYR SER PHE LYS SER ALA SER GLN PHE VAL GLU TRP ASP SEQRES 13 A 190 GLN VAL THR ALA TYR LEU ASN GLY VAL LEU VAL TRP GLY SEQRES 14 A 190 LYS GLU PRO GLY GLY SER VAL VAL PRO SER THR GLN PRO SEQRES 15 A 190 VAL THR THR PRO PRO ALA THR THR HET CA A 201 1 HET GOL A 202 14 HET SO4 A 203 5 HET SO4 A 204 5 HET CL A 205 1 HET CL A 206 1 HET CL A 207 1 HET 1MZ A 208 13 HETNAM CA CALCIUM ION HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION HETNAM 1MZ 1-METHYLIMIDAZOLE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 CA CA 2+ FORMUL 3 GOL C3 H8 O3 FORMUL 4 SO4 2(O4 S 2-) FORMUL 6 CL 3(CL 1-) FORMUL 9 1MZ C4 H7 N2 1+ FORMUL 10 HOH *161(H2 O) SHEET 1 A 6 TYR A 84 GLY A 86 0 SHEET 2 A 6 GLN A 68 ILE A 78 -1 N ILE A 77 O ASN A 85 SHEET 3 A 6 HIS A 123 LYS A 132 -1 O HIS A 123 N ILE A 78 SHEET 4 A 6 PRO A 37 ASN A 43 -1 N PHE A 39 O ILE A 126 SHEET 5 A 6 LEU A 19 ASN A 25 -1 N GLU A 22 O LYS A 40 SHEET 6 A 6 VAL A 153 GLU A 154 -1 O VAL A 153 N PHE A 23 SHEET 1 B 2 THR A 31 THR A 32 0 SHEET 2 B 2 TYR A 138 THR A 139 -1 O TYR A 138 N THR A 32 SHEET 1 C 2 ILE A 49 ASP A 50 0 SHEET 2 C 2 THR A 117 LEU A 118 -1 O LEU A 118 N ILE A 49 SHEET 1 D 5 VAL A 91 THR A 102 0 SHEET 2 D 5 ALA A 105 PHE A 113 -1 O GLU A 110 N THR A 94 SHEET 3 D 5 LEU A 54 TYR A 60 -1 N LEU A 56 O ILE A 111 SHEET 4 D 5 THR A 159 LEU A 162 -1 O TYR A 161 N THR A 55 SHEET 5 D 5 VAL A 165 TRP A 168 -1 O VAL A 167 N ALA A 160 LINK OG1 THR A 61 CA CA A 201 1555 1555 2.39 LINK O THR A 61 CA CA A 201 1555 1555 2.41 LINK OD2 ASP A 63 CA CA A 201 1555 1555 2.35 LINK OD1 ASP A 63 CA CA A 201 1555 1555 2.74 LINK O THR A 139 CA CA A 201 1555 1555 2.43 LINK OD1 ASN A 142 CA CA A 201 1555 1555 2.44 LINK OD1 ASP A 143 CA CA A 201 1555 1555 2.33 LINK CA CA A 201 O HOH A 310 1555 1555 2.50 SITE 1 AC1 6 THR A 61 ASP A 63 THR A 139 ASN A 142 SITE 2 AC1 6 ASP A 143 HOH A 310 SITE 1 AC2 7 TYR A 84 GLY A 86 ILE A 87 THR A 88 SITE 2 AC2 7 SER A 89 HOH A 380 HOH A 396 SITE 1 AC3 6 GLY A 79 SER A 80 ASN A 81 GLY A 82 SITE 2 AC3 6 SER A 83 HOH A 359 SITE 1 AC4 4 SER A 136 ASN A 137 HOH A 413 HOH A 438 SITE 1 AC5 1 ARG A 57 SITE 1 AC6 1 ASP A 156 SITE 1 AC7 2 GLY A 64 HOH A 410 SITE 1 AC8 3 THR A 32 ASN A 33 ASN A 137 CRYST1 109.005 109.005 109.005 90.00 90.00 90.00 P 41 3 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009174 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009174 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009174 0.00000