HEADER IMMUNE SYSTEM 19-MAR-13 4JPI TITLE CRYSTAL STRUCTURE OF A PUTATIVE VRC01 GERMLINE PRECURSOR FAB COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE VRC01 GERMLINE FAB HEAVY CHAIN; COMPND 3 CHAIN: H, A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: PUTATIVE VRC01 GERMLINE FAB LIGHT CHAIN; COMPND 7 CHAIN: L, B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_COMMON: HUMAN; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ANTI-HIV-1, GP120, CD4 BINDING SITE-TARGETING, VRC01 BROADLY KEYWDS 2 NEUTRALIZING ANTIBODY, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.-P.JULIEN,D.C.DIWANJI,J.JARDINE,W.R.SCHIEF,I.A.WILSON REVDAT 5 20-SEP-23 4JPI 1 REMARK REVDAT 4 15-NOV-17 4JPI 1 REMARK REVDAT 3 18-SEP-13 4JPI 1 SOURCE REVDAT 2 22-MAY-13 4JPI 1 JRNL REVDAT 1 10-APR-13 4JPI 0 JRNL AUTH J.JARDINE,J.P.JULIEN,S.MENIS,T.OTA,O.KALYUZHNIY,A.MCGUIRE, JRNL AUTH 2 D.SOK,P.S.HUANG,S.MACPHERSON,M.JONES,T.NIEUSMA,J.MATHISON, JRNL AUTH 3 D.BAKER,A.B.WARD,D.R.BURTON,L.STAMATATOS,D.NEMAZEE, JRNL AUTH 4 I.A.WILSON,W.R.SCHIEF JRNL TITL RATIONAL HIV IMMUNOGEN DESIGN TO TARGET SPECIFIC GERMLINE B JRNL TITL 2 CELL RECEPTORS. JRNL REF SCIENCE V. 340 711 2013 JRNL REFN ISSN 0036-8075 JRNL PMID 23539181 JRNL DOI 10.1126/SCIENCE.1234150 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.15 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.100 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 58400 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 2914 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.1590 - 5.7897 1.00 2701 141 0.1668 0.1753 REMARK 3 2 5.7897 - 4.5970 1.00 2711 142 0.1384 0.1574 REMARK 3 3 4.5970 - 4.0163 1.00 2689 144 0.1242 0.1570 REMARK 3 4 4.0163 - 3.6493 1.00 2713 141 0.1452 0.2028 REMARK 3 5 3.6493 - 3.3879 1.00 2727 143 0.1452 0.1839 REMARK 3 6 3.3879 - 3.1882 1.00 2675 137 0.1631 0.1927 REMARK 3 7 3.1882 - 3.0286 0.99 2703 139 0.1728 0.2181 REMARK 3 8 3.0286 - 2.8967 0.99 2673 140 0.1795 0.2285 REMARK 3 9 2.8967 - 2.7852 0.99 2664 140 0.1951 0.2459 REMARK 3 10 2.7852 - 2.6891 0.98 2653 140 0.2025 0.2371 REMARK 3 11 2.6891 - 2.6051 0.98 2635 139 0.2067 0.2640 REMARK 3 12 2.6051 - 2.5306 0.98 2655 145 0.2185 0.2946 REMARK 3 13 2.5306 - 2.4640 0.97 2649 141 0.2196 0.2806 REMARK 3 14 2.4640 - 2.4039 0.96 2598 135 0.2298 0.3068 REMARK 3 15 2.4039 - 2.3492 0.97 2612 138 0.2303 0.3251 REMARK 3 16 2.3492 - 2.2993 0.96 2595 132 0.2269 0.2286 REMARK 3 17 2.2993 - 2.2533 0.96 2596 142 0.2305 0.2863 REMARK 3 18 2.2533 - 2.2107 0.96 2565 139 0.2333 0.2737 REMARK 3 19 2.2107 - 2.1713 0.94 2548 129 0.2278 0.2586 REMARK 3 20 2.1713 - 2.1345 0.95 2573 136 0.2489 0.3065 REMARK 3 21 2.1345 - 2.1000 0.94 2551 131 0.2524 0.2981 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.480 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.03 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 6676 REMARK 3 ANGLE : 1.105 9058 REMARK 3 CHIRALITY : 0.078 1006 REMARK 3 PLANARITY : 0.005 1156 REMARK 3 DIHEDRAL : 14.563 2385 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 26 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 1 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.6809 24.9737 -22.8747 REMARK 3 T TENSOR REMARK 3 T11: 0.2015 T22: 0.2532 REMARK 3 T33: 0.2094 T12: -0.0604 REMARK 3 T13: 0.0119 T23: 0.0333 REMARK 3 L TENSOR REMARK 3 L11: 4.0796 L22: 6.5060 REMARK 3 L33: 1.5240 L12: -4.2953 REMARK 3 L13: 0.0971 L23: 0.4894 REMARK 3 S TENSOR REMARK 3 S11: 0.0080 S12: -0.2693 S13: -0.2070 REMARK 3 S21: 0.3425 S22: 0.0803 S23: 0.2786 REMARK 3 S31: 0.0720 S32: -0.0837 S33: -0.0982 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 34 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.7706 24.4974 -32.7350 REMARK 3 T TENSOR REMARK 3 T11: 0.2458 T22: 0.2068 REMARK 3 T33: 0.1907 T12: -0.0325 REMARK 3 T13: -0.0159 T23: 0.0130 REMARK 3 L TENSOR REMARK 3 L11: 5.1508 L22: 2.3983 REMARK 3 L33: 1.4967 L12: -1.0354 REMARK 3 L13: 0.8534 L23: -0.1480 REMARK 3 S TENSOR REMARK 3 S11: 0.0395 S12: 0.2100 S13: -0.2683 REMARK 3 S21: -0.1943 S22: -0.0600 S23: 0.2144 REMARK 3 S31: 0.0986 S32: -0.1022 S33: 0.0227 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 76 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.0858 16.2498 -29.7998 REMARK 3 T TENSOR REMARK 3 T11: 0.2830 T22: 0.2420 REMARK 3 T33: 0.2567 T12: -0.0088 REMARK 3 T13: -0.0569 T23: 0.0272 REMARK 3 L TENSOR REMARK 3 L11: 9.1901 L22: 8.2879 REMARK 3 L33: 1.6416 L12: -6.1366 REMARK 3 L13: 0.3633 L23: 1.7902 REMARK 3 S TENSOR REMARK 3 S11: 0.4338 S12: 0.5523 S13: -0.7986 REMARK 3 S21: -0.5108 S22: -0.3577 S23: 0.4484 REMARK 3 S31: 0.1169 S32: -0.1025 S33: -0.0715 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 88 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.6382 31.2242 -27.7622 REMARK 3 T TENSOR REMARK 3 T11: 0.1722 T22: 0.2265 REMARK 3 T33: 0.1817 T12: -0.0071 REMARK 3 T13: -0.0134 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 2.0400 L22: 3.8751 REMARK 3 L33: 2.5504 L12: 0.6384 REMARK 3 L13: -0.5405 L23: 0.2812 REMARK 3 S TENSOR REMARK 3 S11: -0.0129 S12: 0.2060 S13: 0.1210 REMARK 3 S21: 0.0956 S22: 0.0196 S23: 0.2850 REMARK 3 S31: -0.2767 S32: -0.1702 S33: -0.0163 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 112 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.6037 15.2626 -8.2491 REMARK 3 T TENSOR REMARK 3 T11: 0.2657 T22: 0.2400 REMARK 3 T33: 0.2730 T12: -0.0173 REMARK 3 T13: -0.0119 T23: 0.0290 REMARK 3 L TENSOR REMARK 3 L11: 4.6795 L22: 3.4520 REMARK 3 L33: 6.2802 L12: 1.0543 REMARK 3 L13: 4.0756 L23: 2.0703 REMARK 3 S TENSOR REMARK 3 S11: 0.2894 S12: -0.3337 S13: -0.4668 REMARK 3 S21: 0.3103 S22: -0.0748 S23: 0.0846 REMARK 3 S31: 0.3884 S32: -0.3085 S33: -0.2295 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 2 THROUGH 18 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.2729 39.5865 -33.7265 REMARK 3 T TENSOR REMARK 3 T11: 0.1800 T22: 0.2984 REMARK 3 T33: 0.3404 T12: -0.0008 REMARK 3 T13: 0.0167 T23: 0.0874 REMARK 3 L TENSOR REMARK 3 L11: 5.5705 L22: 5.0118 REMARK 3 L33: 7.1538 L12: 3.0054 REMARK 3 L13: 3.0961 L23: 3.6995 REMARK 3 S TENSOR REMARK 3 S11: -0.0417 S12: 0.0700 S13: 0.4570 REMARK 3 S21: -0.1085 S22: -0.1959 S23: -0.1536 REMARK 3 S31: -0.0922 S32: 0.2216 S33: 0.2051 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 19 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.5401 40.1115 -38.2254 REMARK 3 T TENSOR REMARK 3 T11: 0.2015 T22: 0.2319 REMARK 3 T33: 0.2293 T12: -0.0319 REMARK 3 T13: -0.0057 T23: 0.0535 REMARK 3 L TENSOR REMARK 3 L11: 4.7288 L22: 4.6845 REMARK 3 L33: 7.4839 L12: -0.5383 REMARK 3 L13: 1.8448 L23: -3.4770 REMARK 3 S TENSOR REMARK 3 S11: 0.0496 S12: 0.5664 S13: 0.1722 REMARK 3 S21: -0.5262 S22: -0.0076 S23: -0.0272 REMARK 3 S31: 0.2494 S32: 0.0710 S33: -0.0671 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 39 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.2299 43.8647 -29.8125 REMARK 3 T TENSOR REMARK 3 T11: 0.1710 T22: 0.2273 REMARK 3 T33: 0.2074 T12: -0.0150 REMARK 3 T13: -0.0132 T23: 0.0123 REMARK 3 L TENSOR REMARK 3 L11: 3.6838 L22: 4.9276 REMARK 3 L33: 2.4891 L12: -0.6117 REMARK 3 L13: -1.0138 L23: 0.0692 REMARK 3 S TENSOR REMARK 3 S11: 0.0622 S12: -0.0307 S13: 0.3660 REMARK 3 S21: 0.0803 S22: -0.0801 S23: -0.2881 REMARK 3 S31: -0.1937 S32: 0.3150 S33: -0.0056 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 76 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.3754 37.7237 -30.7637 REMARK 3 T TENSOR REMARK 3 T11: 0.2102 T22: 0.3621 REMARK 3 T33: 0.2453 T12: -0.0453 REMARK 3 T13: 0.0480 T23: 0.0367 REMARK 3 L TENSOR REMARK 3 L11: 3.1920 L22: 7.8228 REMARK 3 L33: 6.0020 L12: 2.6376 REMARK 3 L13: 4.2107 L23: 2.6967 REMARK 3 S TENSOR REMARK 3 S11: 0.3227 S12: -0.5029 S13: 0.0739 REMARK 3 S21: 0.4182 S22: -0.3562 S23: -0.4984 REMARK 3 S31: 0.1309 S32: -0.1380 S33: 0.0671 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 102 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.6271 35.3436 -23.5177 REMARK 3 T TENSOR REMARK 3 T11: 0.2163 T22: 0.2730 REMARK 3 T33: 0.2301 T12: -0.0008 REMARK 3 T13: -0.0137 T23: -0.0003 REMARK 3 L TENSOR REMARK 3 L11: 7.9949 L22: 2.0314 REMARK 3 L33: 4.3343 L12: -4.0208 REMARK 3 L13: 6.0126 L23: -3.0840 REMARK 3 S TENSOR REMARK 3 S11: -0.3633 S12: -0.0365 S13: -0.0499 REMARK 3 S21: 0.2635 S22: 0.3316 S23: 0.1093 REMARK 3 S31: -0.0930 S32: -0.1810 S33: -0.0491 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 116 THROUGH 130 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.4250 8.2014 -9.9201 REMARK 3 T TENSOR REMARK 3 T11: 0.3889 T22: 0.3201 REMARK 3 T33: 0.2973 T12: 0.0414 REMARK 3 T13: -0.1058 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 5.8588 L22: 9.2282 REMARK 3 L33: 3.4343 L12: 4.7160 REMARK 3 L13: -0.3329 L23: -3.4717 REMARK 3 S TENSOR REMARK 3 S11: 0.2837 S12: -0.4371 S13: -0.5876 REMARK 3 S21: 0.6760 S22: -0.2090 S23: -0.4221 REMARK 3 S31: 0.1002 S32: 0.0754 S33: -0.0663 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 131 THROUGH 165 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.2040 16.2263 -22.0586 REMARK 3 T TENSOR REMARK 3 T11: 0.2564 T22: 0.2640 REMARK 3 T33: 0.2974 T12: 0.0013 REMARK 3 T13: -0.0245 T23: -0.0519 REMARK 3 L TENSOR REMARK 3 L11: 1.2846 L22: 6.5748 REMARK 3 L33: 1.7077 L12: -0.5319 REMARK 3 L13: 0.3726 L23: -0.5159 REMARK 3 S TENSOR REMARK 3 S11: 0.0707 S12: 0.2745 S13: -0.3411 REMARK 3 S21: -0.3121 S22: 0.0083 S23: -0.3220 REMARK 3 S31: 0.2830 S32: 0.1291 S33: -0.0930 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 166 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.0267 16.0511 -18.3339 REMARK 3 T TENSOR REMARK 3 T11: 0.3188 T22: 0.2875 REMARK 3 T33: 0.2678 T12: 0.0081 REMARK 3 T13: -0.0607 T23: -0.0513 REMARK 3 L TENSOR REMARK 3 L11: 2.3073 L22: 3.2964 REMARK 3 L33: 2.5082 L12: 1.2752 REMARK 3 L13: 0.3318 L23: -1.6304 REMARK 3 S TENSOR REMARK 3 S11: 0.0119 S12: -0.0866 S13: -0.1959 REMARK 3 S21: 0.3231 S22: 0.0428 S23: -0.6029 REMARK 3 S31: 0.0998 S32: 0.0445 S33: 0.0076 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.0919 0.3958 -54.9036 REMARK 3 T TENSOR REMARK 3 T11: 0.4146 T22: 0.1988 REMARK 3 T33: 0.2696 T12: -0.0146 REMARK 3 T13: 0.0755 T23: -0.0408 REMARK 3 L TENSOR REMARK 3 L11: 7.9046 L22: 2.1701 REMARK 3 L33: 3.3027 L12: -1.3267 REMARK 3 L13: 2.9395 L23: -1.1356 REMARK 3 S TENSOR REMARK 3 S11: -0.0193 S12: 0.5076 S13: -0.0646 REMARK 3 S21: -0.5341 S22: 0.0607 S23: -0.2714 REMARK 3 S31: 0.3496 S32: 0.2344 S33: -0.0838 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 34 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.4193 3.5264 -45.4237 REMARK 3 T TENSOR REMARK 3 T11: 0.2841 T22: 0.2754 REMARK 3 T33: 0.2120 T12: -0.0158 REMARK 3 T13: 0.0295 T23: 0.0050 REMARK 3 L TENSOR REMARK 3 L11: 2.7224 L22: 7.9065 REMARK 3 L33: 4.3951 L12: -1.2727 REMARK 3 L13: 1.8367 L23: -3.3940 REMARK 3 S TENSOR REMARK 3 S11: -0.0708 S12: -0.1794 S13: 0.0072 REMARK 3 S21: -0.1237 S22: 0.0936 S23: -0.0199 REMARK 3 S31: -0.0462 S32: -0.3134 S33: 0.0070 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 67 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.2466 3.3784 -53.7413 REMARK 3 T TENSOR REMARK 3 T11: 0.3103 T22: 0.2210 REMARK 3 T33: 0.2164 T12: -0.0337 REMARK 3 T13: 0.0600 T23: 0.0034 REMARK 3 L TENSOR REMARK 3 L11: 2.1743 L22: 1.8937 REMARK 3 L33: 3.0799 L12: -0.5453 REMARK 3 L13: 1.6819 L23: -0.7141 REMARK 3 S TENSOR REMARK 3 S11: -0.0916 S12: -0.0286 S13: -0.1624 REMARK 3 S21: -0.3145 S22: 0.1500 S23: 0.0228 REMARK 3 S31: 0.1914 S32: -0.0674 S33: -0.1065 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 120 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.4473 23.5361 -78.5945 REMARK 3 T TENSOR REMARK 3 T11: 0.4003 T22: 0.2572 REMARK 3 T33: 0.2484 T12: -0.0033 REMARK 3 T13: -0.0090 T23: -0.0458 REMARK 3 L TENSOR REMARK 3 L11: 4.2089 L22: 3.2927 REMARK 3 L33: 4.9139 L12: 1.3126 REMARK 3 L13: -1.6114 L23: -2.1762 REMARK 3 S TENSOR REMARK 3 S11: 0.1253 S12: 0.2842 S13: -0.0617 REMARK 3 S21: -0.2812 S22: -0.0156 S23: 0.2311 REMARK 3 S31: -0.0376 S32: -0.0597 S33: -0.1232 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 18 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.9249 30.6022 -45.2835 REMARK 3 T TENSOR REMARK 3 T11: 0.3534 T22: 0.2254 REMARK 3 T33: 0.2634 T12: 0.0140 REMARK 3 T13: -0.0585 T23: -0.0403 REMARK 3 L TENSOR REMARK 3 L11: 4.5092 L22: 4.9558 REMARK 3 L33: 6.3657 L12: 2.2730 REMARK 3 L13: -3.3523 L23: -2.6292 REMARK 3 S TENSOR REMARK 3 S11: -0.1123 S12: -0.1863 S13: 0.1127 REMARK 3 S21: 0.1129 S22: -0.1131 S23: 0.0541 REMARK 3 S31: -0.5524 S32: 0.3508 S33: 0.2310 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 19 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.8393 20.7409 -42.9794 REMARK 3 T TENSOR REMARK 3 T11: 0.1693 T22: 0.1761 REMARK 3 T33: 0.1918 T12: -0.0026 REMARK 3 T13: -0.0181 T23: -0.0055 REMARK 3 L TENSOR REMARK 3 L11: 4.0662 L22: 6.1790 REMARK 3 L33: 5.6453 L12: -0.6009 REMARK 3 L13: -0.5674 L23: 0.5528 REMARK 3 S TENSOR REMARK 3 S11: -0.1794 S12: -0.0663 S13: 0.1081 REMARK 3 S21: -0.1336 S22: 0.1118 S23: -0.1378 REMARK 3 S31: -0.1799 S32: 0.1002 S33: 0.0186 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 49 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.8476 24.1982 -41.0433 REMARK 3 T TENSOR REMARK 3 T11: 0.2144 T22: 0.2180 REMARK 3 T33: 0.2419 T12: -0.0284 REMARK 3 T13: -0.0136 T23: -0.0404 REMARK 3 L TENSOR REMARK 3 L11: 4.8270 L22: 6.6268 REMARK 3 L33: 6.4403 L12: 1.6272 REMARK 3 L13: -1.2764 L23: -2.5312 REMARK 3 S TENSOR REMARK 3 S11: -0.2096 S12: -0.0719 S13: -0.0349 REMARK 3 S21: 0.0632 S22: 0.1093 S23: -0.5728 REMARK 3 S31: -0.3107 S32: 0.5189 S33: 0.0992 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 76 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.7188 22.6325 -46.7822 REMARK 3 T TENSOR REMARK 3 T11: 0.3513 T22: 0.2654 REMARK 3 T33: 0.2212 T12: 0.0190 REMARK 3 T13: 0.0561 T23: -0.0682 REMARK 3 L TENSOR REMARK 3 L11: 4.9303 L22: 8.6956 REMARK 3 L33: 6.9522 L12: 2.2951 REMARK 3 L13: 0.1032 L23: -4.6124 REMARK 3 S TENSOR REMARK 3 S11: -0.2043 S12: -0.1987 S13: 0.0080 REMARK 3 S21: -0.1826 S22: 0.0137 S23: 0.0072 REMARK 3 S31: -0.1208 S32: 0.2847 S33: 0.1773 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 103 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.7768 37.9559 -58.6971 REMARK 3 T TENSOR REMARK 3 T11: 0.4511 T22: 0.2906 REMARK 3 T33: 0.3221 T12: -0.0034 REMARK 3 T13: -0.0355 T23: -0.0101 REMARK 3 L TENSOR REMARK 3 L11: 2.2861 L22: 5.0888 REMARK 3 L33: 4.3954 L12: -3.1071 REMARK 3 L13: 3.1898 L23: -3.9305 REMARK 3 S TENSOR REMARK 3 S11: -0.2762 S12: 0.0486 S13: -0.1048 REMARK 3 S21: 0.1246 S22: 0.2848 S23: -0.2900 REMARK 3 S31: -0.4657 S32: -0.0136 S33: 0.0929 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 116 THROUGH 152 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.1697 31.3281 -70.9434 REMARK 3 T TENSOR REMARK 3 T11: 0.3430 T22: 0.2380 REMARK 3 T33: 0.3010 T12: 0.0375 REMARK 3 T13: 0.0134 T23: -0.0112 REMARK 3 L TENSOR REMARK 3 L11: 6.8823 L22: 5.1281 REMARK 3 L33: 3.4277 L12: 1.2821 REMARK 3 L13: 2.8474 L23: 0.9809 REMARK 3 S TENSOR REMARK 3 S11: -0.0419 S12: 0.1205 S13: -0.0831 REMARK 3 S21: -0.2890 S22: -0.0366 S23: 0.4741 REMARK 3 S31: -0.1495 S32: -0.3034 S33: 0.1083 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 153 THROUGH 165 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.9444 30.0596 -64.3405 REMARK 3 T TENSOR REMARK 3 T11: 0.4870 T22: 0.5368 REMARK 3 T33: 0.4793 T12: 0.0079 REMARK 3 T13: 0.1082 T23: -0.1120 REMARK 3 L TENSOR REMARK 3 L11: 7.2876 L22: 2.7397 REMARK 3 L33: 3.2102 L12: -0.9014 REMARK 3 L13: -0.0811 L23: 0.0092 REMARK 3 S TENSOR REMARK 3 S11: 0.0394 S12: -0.3222 S13: 0.2433 REMARK 3 S21: 0.2962 S22: -0.2085 S23: 0.8298 REMARK 3 S31: -0.3240 S32: -0.9472 S33: 0.1496 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 166 THROUGH 176 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.6245 32.6477 -64.5769 REMARK 3 T TENSOR REMARK 3 T11: 0.5600 T22: 0.2908 REMARK 3 T33: 0.3597 T12: -0.0855 REMARK 3 T13: -0.0051 T23: 0.0205 REMARK 3 L TENSOR REMARK 3 L11: 2.0540 L22: 2.0710 REMARK 3 L33: 8.1520 L12: 3.9768 REMARK 3 L13: 4.3871 L23: 6.8000 REMARK 3 S TENSOR REMARK 3 S11: -0.2336 S12: 0.3659 S13: -0.2301 REMARK 3 S21: -0.1032 S22: 0.0162 S23: -0.6571 REMARK 3 S31: -0.2119 S32: 0.2369 S33: 0.2135 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 177 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.9411 34.5946 -70.7519 REMARK 3 T TENSOR REMARK 3 T11: 0.4581 T22: 0.4632 REMARK 3 T33: 0.4966 T12: 0.1118 REMARK 3 T13: -0.0375 T23: -0.1027 REMARK 3 L TENSOR REMARK 3 L11: 4.9117 L22: 7.6819 REMARK 3 L33: 2.9427 L12: 1.1128 REMARK 3 L13: 1.3299 L23: 1.8540 REMARK 3 S TENSOR REMARK 3 S11: -0.2585 S12: -0.1332 S13: 0.3557 REMARK 3 S21: -0.2724 S22: -0.3024 S23: 1.4074 REMARK 3 S31: -0.3385 S32: -0.6945 S33: 0.5111 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4JPI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-MAR-13. REMARK 100 THE DEPOSITION ID IS D_1000078340. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-APR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03320 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL CRYO-COOLED REMARK 200 SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59809 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 86.220 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08600 REMARK 200 FOR THE DATA SET : 13.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.52100 REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3NGB CHAINS H AND L REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% W/V PEG3350, 0.2 M LITHIUM REMARK 280 CITRATE, PH 8.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 86.22000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 49.77914 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 30.81000 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 86.22000 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 49.77914 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 30.81000 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 86.22000 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 49.77914 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 30.81000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 99.55828 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 61.62000 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 99.55828 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 61.62000 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 99.55828 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 61.62000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS H 214 REMARK 465 SER H 215 REMARK 465 CYS H 216 REMARK 465 ASP H 217 REMARK 465 LYS H 218 REMARK 465 THR H 219 REMARK 465 HIS H 220 REMARK 465 THR H 221 REMARK 465 LYS H 222 REMARK 465 LEU H 223 REMARK 465 GLY H 224 REMARK 465 GLY H 225 REMARK 465 SER H 226 REMARK 465 GLY H 227 REMARK 465 GLY H 228 REMARK 465 HIS H 229 REMARK 465 HIS H 230 REMARK 465 HIS H 231 REMARK 465 HIS H 232 REMARK 465 HIS H 233 REMARK 465 HIS H 234 REMARK 465 GLY H 235 REMARK 465 GLY H 236 REMARK 465 SER H 237 REMARK 465 GLY H 238 REMARK 465 HIS H 239 REMARK 465 GLY H 240 REMARK 465 GLU L 1 REMARK 465 GLY L 214 REMARK 465 GLU L 215 REMARK 465 CYS L 216 REMARK 465 CYS A 97A REMARK 465 ASP A 97B REMARK 465 TYR A 97C REMARK 465 ASN A 97D REMARK 465 SER A 127 REMARK 465 SER A 128 REMARK 465 LYS A 214 REMARK 465 SER A 215 REMARK 465 CYS A 216 REMARK 465 ASP A 217 REMARK 465 LYS A 218 REMARK 465 THR A 219 REMARK 465 HIS A 220 REMARK 465 THR A 221 REMARK 465 LYS A 222 REMARK 465 LEU A 223 REMARK 465 GLY A 224 REMARK 465 GLY A 225 REMARK 465 SER A 226 REMARK 465 GLY A 227 REMARK 465 GLY A 228 REMARK 465 HIS A 229 REMARK 465 HIS A 230 REMARK 465 HIS A 231 REMARK 465 HIS A 232 REMARK 465 HIS A 233 REMARK 465 HIS A 234 REMARK 465 GLY A 235 REMARK 465 GLY A 236 REMARK 465 SER A 237 REMARK 465 GLY A 238 REMARK 465 HIS A 239 REMARK 465 GLY A 240 REMARK 465 GLU B 1 REMARK 465 GLU B 215 REMARK 465 CYS B 216 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS A 140 CB CYS A 196 2.15 REMARK 500 O HOH L 385 O HOH L 394 2.16 REMARK 500 OE1 GLN A 64 O HOH A 465 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG H 66 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 LEU H 178 CA - CB - CG ANGL. DEV. = 14.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP H 144 60.21 65.21 REMARK 500 ALA L 51 -36.09 76.67 REMARK 500 ALA L 84 -174.06 -177.14 REMARK 500 TYR L 91 -130.68 52.85 REMARK 500 ASN L 140 74.31 56.38 REMARK 500 SER A 130 107.45 -53.93 REMARK 500 ASP A 144 65.36 63.17 REMARK 500 SER B 30 -126.07 49.86 REMARK 500 ALA B 51 -37.99 74.10 REMARK 500 SER B 67 111.72 -167.18 REMARK 500 ALA B 84 -176.02 -170.58 REMARK 500 TYR B 91 -125.63 47.41 REMARK 500 ASN B 140 75.29 55.96 REMARK 500 ARG B 213 86.46 -49.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL H 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL H 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL H 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4JPJ RELATED DB: PDB REMARK 900 RELATED ID: 4JPK RELATED DB: PDB DBREF 4JPI H 1 240 PDB 4JPI 4JPI 1 240 DBREF 4JPI A 1 240 PDB 4JPI 4JPI 1 240 DBREF 4JPI L 1 216 PDB 4JPI 4JPI 1 216 DBREF 4JPI B 1 216 PDB 4JPI 4JPI 1 216 SEQRES 1 H 248 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 H 248 PRO GLY ALA SER VAL LYS VAL SER CYS LYS ALA SER GLY SEQRES 3 H 248 TYR THR PHE THR GLY TYR TYR MET HIS TRP VAL ARG GLN SEQRES 4 H 248 ALA PRO GLY GLN GLY LEU GLU TRP MET GLY TRP ILE ASN SEQRES 5 H 248 PRO ASN SER GLY GLY THR ASN TYR ALA GLN LYS PHE GLN SEQRES 6 H 248 GLY ARG VAL THR MET THR ARG ASP THR SER ILE SER THR SEQRES 7 H 248 ALA TYR MET GLU LEU SER ARG LEU ARG SER ASP ASP THR SEQRES 8 H 248 ALA VAL TYR TYR CYS ALA ARG GLY LYS ASN CYS ASP TYR SEQRES 9 H 248 ASN TRP ASP PHE GLN HIS TRP GLY GLN GLY THR LEU VAL SEQRES 10 H 248 THR VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE SEQRES 11 H 248 PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY THR SEQRES 12 H 248 ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU SEQRES 13 H 248 PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER SEQRES 14 H 248 GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY SEQRES 15 H 248 LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER SEQRES 16 H 248 SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS SEQRES 17 H 248 LYS PRO SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO SEQRES 18 H 248 LYS SER CYS ASP LYS THR HIS THR LYS LEU GLY GLY SER SEQRES 19 H 248 GLY GLY HIS HIS HIS HIS HIS HIS GLY GLY SER GLY HIS SEQRES 20 H 248 GLY SEQRES 1 L 210 GLU ILE VAL LEU THR GLN SER PRO ALA THR LEU SER LEU SEQRES 2 L 210 SER PRO GLY GLU ARG ALA THR LEU SER CYS ARG ALA SER SEQRES 3 L 210 GLN SER VAL SER SER TYR LEU ALA TRP TYR GLN GLN LYS SEQRES 4 L 210 PRO GLY GLN ALA PRO ARG LEU LEU ILE TYR ASP ALA SER SEQRES 5 L 210 ASN ARG ALA THR GLY ILE PRO ALA ARG PHE SER GLY SER SEQRES 6 L 210 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 L 210 GLU PRO GLU ASP PHE ALA VAL TYR TYR CYS GLN GLN TYR SEQRES 8 L 210 GLU PHE PHE GLY GLN GLY THR LYS LEU GLU ILE LYS ARG SEQRES 9 L 210 SER THR VAL ALA PRO SER VAL PHE ILE PHE PRO PRO SER SEQRES 10 L 210 ASP GLU GLN LEU LYS SER GLY THR ALA SER VAL VAL CYS SEQRES 11 L 210 LEU LEU ASN ASN PHE TYR PRO ARG GLU ALA LYS VAL GLN SEQRES 12 L 210 TRP LYS VAL ASP ASN ALA LEU GLN SER GLY ASN SER GLN SEQRES 13 L 210 GLU SER VAL THR GLU GLN ASP SER LYS ASP SER THR TYR SEQRES 14 L 210 SER LEU SER SER THR LEU THR LEU SER LYS ALA ASP TYR SEQRES 15 L 210 GLU LYS HIS LYS VAL TYR ALA CYS GLU VAL THR HIS GLN SEQRES 16 L 210 GLY LEU SER SER PRO VAL THR LYS SER PHE ASN ARG GLY SEQRES 17 L 210 GLU CYS SEQRES 1 A 248 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 A 248 PRO GLY ALA SER VAL LYS VAL SER CYS LYS ALA SER GLY SEQRES 3 A 248 TYR THR PHE THR GLY TYR TYR MET HIS TRP VAL ARG GLN SEQRES 4 A 248 ALA PRO GLY GLN GLY LEU GLU TRP MET GLY TRP ILE ASN SEQRES 5 A 248 PRO ASN SER GLY GLY THR ASN TYR ALA GLN LYS PHE GLN SEQRES 6 A 248 GLY ARG VAL THR MET THR ARG ASP THR SER ILE SER THR SEQRES 7 A 248 ALA TYR MET GLU LEU SER ARG LEU ARG SER ASP ASP THR SEQRES 8 A 248 ALA VAL TYR TYR CYS ALA ARG GLY LYS ASN CYS ASP TYR SEQRES 9 A 248 ASN TRP ASP PHE GLN HIS TRP GLY GLN GLY THR LEU VAL SEQRES 10 A 248 THR VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE SEQRES 11 A 248 PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY THR SEQRES 12 A 248 ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU SEQRES 13 A 248 PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER SEQRES 14 A 248 GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY SEQRES 15 A 248 LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER SEQRES 16 A 248 SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS SEQRES 17 A 248 LYS PRO SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO SEQRES 18 A 248 LYS SER CYS ASP LYS THR HIS THR LYS LEU GLY GLY SER SEQRES 19 A 248 GLY GLY HIS HIS HIS HIS HIS HIS GLY GLY SER GLY HIS SEQRES 20 A 248 GLY SEQRES 1 B 210 GLU ILE VAL LEU THR GLN SER PRO ALA THR LEU SER LEU SEQRES 2 B 210 SER PRO GLY GLU ARG ALA THR LEU SER CYS ARG ALA SER SEQRES 3 B 210 GLN SER VAL SER SER TYR LEU ALA TRP TYR GLN GLN LYS SEQRES 4 B 210 PRO GLY GLN ALA PRO ARG LEU LEU ILE TYR ASP ALA SER SEQRES 5 B 210 ASN ARG ALA THR GLY ILE PRO ALA ARG PHE SER GLY SER SEQRES 6 B 210 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 B 210 GLU PRO GLU ASP PHE ALA VAL TYR TYR CYS GLN GLN TYR SEQRES 8 B 210 GLU PHE PHE GLY GLN GLY THR LYS LEU GLU ILE LYS ARG SEQRES 9 B 210 SER THR VAL ALA PRO SER VAL PHE ILE PHE PRO PRO SER SEQRES 10 B 210 ASP GLU GLN LEU LYS SER GLY THR ALA SER VAL VAL CYS SEQRES 11 B 210 LEU LEU ASN ASN PHE TYR PRO ARG GLU ALA LYS VAL GLN SEQRES 12 B 210 TRP LYS VAL ASP ASN ALA LEU GLN SER GLY ASN SER GLN SEQRES 13 B 210 GLU SER VAL THR GLU GLN ASP SER LYS ASP SER THR TYR SEQRES 14 B 210 SER LEU SER SER THR LEU THR LEU SER LYS ALA ASP TYR SEQRES 15 B 210 GLU LYS HIS LYS VAL TYR ALA CYS GLU VAL THR HIS GLN SEQRES 16 B 210 GLY LEU SER SER PRO VAL THR LYS SER PHE ASN ARG GLY SEQRES 17 B 210 GLU CYS HET GOL H 301 6 HET GOL H 302 6 HET GOL H 303 6 HET GOL A 301 6 HET GOL A 302 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 GOL 5(C3 H8 O3) FORMUL 10 HOH *387(H2 O) HELIX 1 1 THR H 28 TYR H 32 5 5 HELIX 2 2 GLN H 61 GLN H 64 5 4 HELIX 3 3 THR H 73 ILE H 75 5 3 HELIX 4 4 ARG H 83 THR H 87 5 5 HELIX 5 5 SER H 127 LYS H 129 5 3 HELIX 6 6 SER H 156 ALA H 158 5 3 HELIX 7 7 SER H 187 THR H 191 5 5 HELIX 8 8 LYS H 201 ASN H 204 5 4 HELIX 9 9 GLU L 79 PHE L 83 5 5 HELIX 10 10 SER L 123 SER L 129 1 7 HELIX 11 11 LYS L 185 GLU L 189 1 5 HELIX 12 12 THR A 28 TYR A 32 5 5 HELIX 13 13 GLN A 61 GLN A 64 5 4 HELIX 14 14 THR A 73 ILE A 75 5 3 HELIX 15 15 ARG A 83 THR A 87 5 5 HELIX 16 16 SER A 156 ALA A 158 5 3 HELIX 17 17 SER A 187 THR A 191 5 5 HELIX 18 18 LYS A 201 ASN A 204 5 4 HELIX 19 19 GLU B 79 PHE B 83 5 5 HELIX 20 20 SER B 123 LYS B 128 1 6 HELIX 21 21 LYS B 185 HIS B 191 1 7 SHEET 1 A 4 GLN H 3 GLN H 6 0 SHEET 2 A 4 VAL H 18 SER H 25 -1 O LYS H 23 N VAL H 5 SHEET 3 A 4 THR H 77 LEU H 82 -1 O ALA H 78 N CYS H 22 SHEET 4 A 4 VAL H 67 ASP H 72 -1 N THR H 68 O GLU H 81 SHEET 1 B 6 GLU H 10 LYS H 12 0 SHEET 2 B 6 THR H 107 VAL H 111 1 O THR H 110 N LYS H 12 SHEET 3 B 6 ALA H 88 GLY H 95 -1 N TYR H 90 O THR H 107 SHEET 4 B 6 MET H 34 GLN H 39 -1 N VAL H 37 O TYR H 91 SHEET 5 B 6 LEU H 45 ILE H 51 -1 O MET H 48 N TRP H 36 SHEET 6 B 6 THR H 57 TYR H 59 -1 O ASN H 58 N TRP H 50 SHEET 1 C 4 GLU H 10 LYS H 12 0 SHEET 2 C 4 THR H 107 VAL H 111 1 O THR H 110 N LYS H 12 SHEET 3 C 4 ALA H 88 GLY H 95 -1 N TYR H 90 O THR H 107 SHEET 4 C 4 PHE H 100D TRP H 103 -1 O HIS H 102 N ARG H 94 SHEET 1 D 4 SER H 120 LEU H 124 0 SHEET 2 D 4 THR H 135 TYR H 145 -1 O GLY H 139 N LEU H 124 SHEET 3 D 4 TYR H 176 PRO H 185 -1 O TYR H 176 N TYR H 145 SHEET 4 D 4 VAL H 163 THR H 165 -1 N HIS H 164 O VAL H 181 SHEET 1 E 4 THR H 131 SER H 132 0 SHEET 2 E 4 THR H 135 TYR H 145 -1 O THR H 135 N SER H 132 SHEET 3 E 4 TYR H 176 PRO H 185 -1 O TYR H 176 N TYR H 145 SHEET 4 E 4 VAL H 169 LEU H 170 -1 N VAL H 169 O SER H 177 SHEET 1 F 3 THR H 151 TRP H 154 0 SHEET 2 F 3 ILE H 195 HIS H 200 -1 O ASN H 199 N THR H 151 SHEET 3 F 3 THR H 205 LYS H 210 -1 O THR H 205 N HIS H 200 SHEET 1 G 4 LEU L 4 SER L 7 0 SHEET 2 G 4 ALA L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 G 4 ASP L 70 ILE L 75 -1 O LEU L 73 N LEU L 21 SHEET 4 G 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 H 6 THR L 10 LEU L 13 0 SHEET 2 H 6 THR L 102 ILE L 108 1 O LYS L 103 N LEU L 11 SHEET 3 H 6 VAL L 85 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 H 6 ALA L 34 GLN L 38 -1 N TYR L 36 O TYR L 87 SHEET 5 H 6 ARG L 45 TYR L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 H 6 ASN L 53 ARG L 54 -1 O ASN L 53 N TYR L 49 SHEET 1 I 4 THR L 10 LEU L 13 0 SHEET 2 I 4 THR L 102 ILE L 108 1 O LYS L 103 N LEU L 11 SHEET 3 I 4 VAL L 85 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 I 4 PHE L 97 PHE L 98 -1 O PHE L 97 N GLN L 90 SHEET 1 J 4 SER L 116 PHE L 120 0 SHEET 2 J 4 THR L 131 PHE L 141 -1 O VAL L 135 N PHE L 120 SHEET 3 J 4 TYR L 175 SER L 184 -1 O LEU L 183 N ALA L 132 SHEET 4 J 4 SER L 161 VAL L 165 -1 N GLN L 162 O THR L 180 SHEET 1 K 4 ALA L 155 LEU L 156 0 SHEET 2 K 4 LYS L 147 VAL L 152 -1 N VAL L 152 O ALA L 155 SHEET 3 K 4 VAL L 193 THR L 199 -1 O ALA L 195 N LYS L 151 SHEET 4 K 4 VAL L 207 ASN L 212 -1 O VAL L 207 N VAL L 198 SHEET 1 L 4 GLN A 3 GLN A 6 0 SHEET 2 L 4 VAL A 18 SER A 25 -1 O LYS A 23 N VAL A 5 SHEET 3 L 4 THR A 77 LEU A 82 -1 O MET A 80 N VAL A 20 SHEET 4 L 4 VAL A 67 ASP A 72 -1 N ASP A 72 O THR A 77 SHEET 1 M 6 GLU A 10 LYS A 12 0 SHEET 2 M 6 THR A 107 VAL A 111 1 O THR A 110 N LYS A 12 SHEET 3 M 6 ALA A 88 GLY A 95 -1 N ALA A 88 O VAL A 109 SHEET 4 M 6 MET A 34 GLN A 39 -1 N VAL A 37 O TYR A 91 SHEET 5 M 6 LEU A 45 ILE A 51 -1 O MET A 48 N TRP A 36 SHEET 6 M 6 THR A 57 TYR A 59 -1 O ASN A 58 N TRP A 50 SHEET 1 N 4 GLU A 10 LYS A 12 0 SHEET 2 N 4 THR A 107 VAL A 111 1 O THR A 110 N LYS A 12 SHEET 3 N 4 ALA A 88 GLY A 95 -1 N ALA A 88 O VAL A 109 SHEET 4 N 4 PHE A 100D TRP A 103 -1 O HIS A 102 N ARG A 94 SHEET 1 O 4 SER A 120 LEU A 124 0 SHEET 2 O 4 THR A 135 TYR A 145 -1 O GLY A 139 N LEU A 124 SHEET 3 O 4 TYR A 176 PRO A 185 -1 O TYR A 176 N TYR A 145 SHEET 4 O 4 VAL A 163 THR A 165 -1 N HIS A 164 O VAL A 181 SHEET 1 P 4 SER A 120 LEU A 124 0 SHEET 2 P 4 THR A 135 TYR A 145 -1 O GLY A 139 N LEU A 124 SHEET 3 P 4 TYR A 176 PRO A 185 -1 O TYR A 176 N TYR A 145 SHEET 4 P 4 VAL A 169 LEU A 170 -1 N VAL A 169 O SER A 177 SHEET 1 Q 3 THR A 151 TRP A 154 0 SHEET 2 Q 3 TYR A 194 HIS A 200 -1 O ASN A 197 N SER A 153 SHEET 3 Q 3 THR A 205 VAL A 211 -1 O VAL A 211 N TYR A 194 SHEET 1 R 4 LEU B 4 SER B 7 0 SHEET 2 R 4 ALA B 19 ALA B 25 -1 O SER B 22 N SER B 7 SHEET 3 R 4 ASP B 70 ILE B 75 -1 O LEU B 73 N LEU B 21 SHEET 4 R 4 PHE B 62 GLY B 66 -1 N SER B 63 O THR B 74 SHEET 1 S 6 THR B 10 LEU B 13 0 SHEET 2 S 6 THR B 102 ILE B 108 1 O GLU B 107 N LEU B 11 SHEET 3 S 6 VAL B 85 GLN B 90 -1 N TYR B 86 O THR B 102 SHEET 4 S 6 ALA B 34 GLN B 38 -1 N ALA B 34 O GLN B 89 SHEET 5 S 6 ARG B 45 TYR B 49 -1 O LEU B 47 N TRP B 35 SHEET 6 S 6 ASN B 53 ARG B 54 -1 O ASN B 53 N TYR B 49 SHEET 1 T 4 THR B 10 LEU B 13 0 SHEET 2 T 4 THR B 102 ILE B 108 1 O GLU B 107 N LEU B 11 SHEET 3 T 4 VAL B 85 GLN B 90 -1 N TYR B 86 O THR B 102 SHEET 4 T 4 PHE B 97 PHE B 98 -1 O PHE B 97 N GLN B 90 SHEET 1 U 4 SER B 116 PHE B 120 0 SHEET 2 U 4 THR B 131 PHE B 141 -1 O VAL B 135 N PHE B 120 SHEET 3 U 4 TYR B 175 SER B 184 -1 O LEU B 181 N VAL B 134 SHEET 4 U 4 SER B 161 VAL B 165 -1 N SER B 164 O SER B 178 SHEET 1 V 4 ALA B 155 LEU B 156 0 SHEET 2 V 4 LYS B 147 VAL B 152 -1 N VAL B 152 O ALA B 155 SHEET 3 V 4 VAL B 193 THR B 199 -1 O GLU B 197 N GLN B 149 SHEET 4 V 4 VAL B 207 ASN B 212 -1 O VAL B 207 N VAL B 198 SSBOND 1 CYS H 22 CYS H 92 1555 1555 2.08 SSBOND 2 CYS H 140 CYS H 196 1555 1555 2.03 SSBOND 3 CYS L 23 CYS L 88 1555 1555 2.09 SSBOND 4 CYS L 136 CYS L 196 1555 1555 2.06 SSBOND 5 CYS A 22 CYS A 92 1555 1555 2.06 SSBOND 6 CYS A 140 CYS A 196 1555 1555 2.05 SSBOND 7 CYS B 23 CYS B 88 1555 1555 2.10 SSBOND 8 CYS B 136 CYS B 196 1555 1555 2.05 CISPEP 1 PHE H 146 PRO H 147 0 -3.75 CISPEP 2 GLU H 148 PRO H 149 0 -0.72 CISPEP 3 SER L 7 PRO L 8 0 -8.14 CISPEP 4 TYR L 142 PRO L 143 0 2.78 CISPEP 5 PHE A 146 PRO A 147 0 -5.45 CISPEP 6 GLU A 148 PRO A 149 0 0.37 CISPEP 7 SER B 7 PRO B 8 0 -7.75 CISPEP 8 TYR B 142 PRO B 143 0 2.35 SITE 1 AC1 3 GLN B 27 GLU H 148 ALA H 168 SITE 1 AC2 5 LYS H 96 ASN H 97 SER H 187 HOH H 407 SITE 2 AC2 5 TYR L 49 SITE 1 AC3 4 ARG A 71 GOL A 302 HOH A 486 TRP H 100B SITE 1 AC4 5 GLU A 10 LYS A 12 LYS A 19 HOH A 461 SITE 2 AC4 5 HOH A 467 SITE 1 AC5 4 ARG A 71 ASP A 72 THR A 73 GOL H 303 CRYST1 172.440 172.440 92.430 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005799 0.003348 0.000000 0.00000 SCALE2 0.000000 0.006696 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010819 0.00000