HEADER TRANSCRIPTION/DNA 20-MAR-13 4JQD TITLE CRYSTAL STRUCTURE OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN TITLE 2 C.CSP231I OL OPERATOR COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: CSP231I C PROTEIN; COMPND 3 CHAIN: A, B, E, F; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA (5'- COMPND 7 D(*AP*CP*AP*CP*TP*AP*AP*GP*GP*AP*AP*AP*AP*CP*TP*TP*AP*GP*TP*AP*A)- COMPND 8 3'); COMPND 9 CHAIN: C, G; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: DNA (5'- COMPND 13 D(*TP*TP*AP*CP*TP*AP*AP*GP*TP*TP*TP*TP*CP*CP*TP*TP*AP*GP*TP*GP*T)- COMPND 14 3'); COMPND 15 CHAIN: D, H; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CITROBACTER SP. RFL231; SOURCE 3 ORGANISM_TAXID: 315237; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) GOLD; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET-11A; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES KEYWDS HELIX-TURN-HELIX, C CONTROLLER PROTEIN, RESTRICTION-MODIFICATION KEYWDS 2 SYSTEMS, TRANSCRIPTIONAL REGULATION, TRANSCRIPTION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.B.SHEVTSOV,S.D.STREETER,S.J.THRESH,J.E.MCGEEHAN,G.G.KNEALE REVDAT 4 20-SEP-23 4JQD 1 REMARK REVDAT 3 15-APR-15 4JQD 1 JRNL REVDAT 2 11-FEB-15 4JQD 1 JRNL REVDAT 1 02-APR-14 4JQD 0 JRNL AUTH M.B.SHEVTSOV,S.D.STREETER,S.J.THRESH,A.SWIDERSKA, JRNL AUTH 2 J.E.MCGEEHAN,G.G.KNEALE JRNL TITL STRUCTURAL ANALYSIS OF DNA BINDING BY C.CSP231I, A MEMBER OF JRNL TITL 2 A NOVEL CLASS OF R-M CONTROLLER PROTEINS REGULATING GENE JRNL TITL 3 EXPRESSION. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 71 398 2015 JRNL REFN ISSN 0907-4449 JRNL PMID 25664751 JRNL DOI 10.1107/S139900471402690X REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 19280 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1041 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.82 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1154 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 78.11 REMARK 3 BIN R VALUE (WORKING SET) : 0.4020 REMARK 3 BIN FREE R VALUE SET COUNT : 70 REMARK 3 BIN FREE R VALUE : 0.4110 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3076 REMARK 3 NUCLEIC ACID ATOMS : 1710 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 51 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.05000 REMARK 3 B22 (A**2) : 0.19000 REMARK 3 B33 (A**2) : -0.16000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.19000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.333 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.267 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 29.628 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5046 ; 0.012 ; 0.016 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7152 ; 0.863 ; 1.650 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 376 ; 3.433 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 156 ;32.699 ;23.462 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 619 ;13.690 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 35 ;10.936 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 711 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3213 ; 0.012 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 94 REMARK 3 ORIGIN FOR THE GROUP (A): -2.3137 -34.4433 186.9655 REMARK 3 T TENSOR REMARK 3 T11: 0.1334 T22: 0.0486 REMARK 3 T33: 0.3271 T12: 0.0321 REMARK 3 T13: -0.0858 T23: -0.0193 REMARK 3 L TENSOR REMARK 3 L11: 5.8907 L22: 2.2230 REMARK 3 L33: 3.3134 L12: 0.2478 REMARK 3 L13: -2.0272 L23: -0.5116 REMARK 3 S TENSOR REMARK 3 S11: 0.0809 S12: 0.2509 S13: -0.1371 REMARK 3 S21: -0.1037 S22: -0.0990 S23: -0.0559 REMARK 3 S31: 0.1870 S32: 0.2198 S33: 0.0181 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 94 REMARK 3 ORIGIN FOR THE GROUP (A): -2.8001 -16.2620 182.8177 REMARK 3 T TENSOR REMARK 3 T11: 0.1838 T22: 0.0649 REMARK 3 T33: 0.3285 T12: 0.0120 REMARK 3 T13: -0.0274 T23: 0.0477 REMARK 3 L TENSOR REMARK 3 L11: 5.5200 L22: 5.5151 REMARK 3 L33: 5.7154 L12: -1.3383 REMARK 3 L13: -1.5907 L23: -0.3918 REMARK 3 S TENSOR REMARK 3 S11: 0.3199 S12: 0.5489 S13: 0.3034 REMARK 3 S21: -0.3074 S22: -0.1138 S23: -0.0615 REMARK 3 S31: -0.3207 S32: 0.0474 S33: -0.2061 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 21 REMARK 3 RESIDUE RANGE : D 1 D 21 REMARK 3 ORIGIN FOR THE GROUP (A): -1.5873 -31.5634 149.4808 REMARK 3 T TENSOR REMARK 3 T11: 0.2097 T22: 0.1292 REMARK 3 T33: 0.3497 T12: -0.0152 REMARK 3 T13: 0.0090 T23: 0.0502 REMARK 3 L TENSOR REMARK 3 L11: 2.6108 L22: 5.9067 REMARK 3 L33: 1.9059 L12: -0.8026 REMARK 3 L13: -0.5687 L23: 0.0618 REMARK 3 S TENSOR REMARK 3 S11: 0.2791 S12: 0.2036 S13: 0.1463 REMARK 3 S21: -0.3741 S22: -0.3893 S23: -0.6190 REMARK 3 S31: -0.1992 S32: 0.3588 S33: 0.1102 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 1 E 94 REMARK 3 ORIGIN FOR THE GROUP (A): -18.3006 -43.3284 161.3685 REMARK 3 T TENSOR REMARK 3 T11: 0.1490 T22: 0.0209 REMARK 3 T33: 0.3525 T12: -0.0169 REMARK 3 T13: -0.0633 T23: 0.0292 REMARK 3 L TENSOR REMARK 3 L11: 6.1593 L22: 2.0859 REMARK 3 L33: 3.2063 L12: -0.8929 REMARK 3 L13: -2.2879 L23: 0.1476 REMARK 3 S TENSOR REMARK 3 S11: -0.0890 S12: -0.2330 S13: -0.4623 REMARK 3 S21: 0.0432 S22: -0.0685 S23: 0.0335 REMARK 3 S31: 0.2627 S32: -0.0253 S33: 0.1575 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 1 F 93 REMARK 3 ORIGIN FOR THE GROUP (A): -17.5239 -24.7864 164.6568 REMARK 3 T TENSOR REMARK 3 T11: 0.1913 T22: 0.0348 REMARK 3 T33: 0.2788 T12: -0.0250 REMARK 3 T13: -0.0333 T23: -0.0434 REMARK 3 L TENSOR REMARK 3 L11: 6.3045 L22: 6.2241 REMARK 3 L33: 4.6433 L12: 1.2495 REMARK 3 L13: -1.3474 L23: -0.3057 REMARK 3 S TENSOR REMARK 3 S11: 0.3606 S12: -0.4554 S13: 0.4166 REMARK 3 S21: 0.3951 S22: -0.1389 S23: 0.1945 REMARK 3 S31: -0.3264 S32: 0.0449 S33: -0.2216 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 1 G 21 REMARK 3 RESIDUE RANGE : H 1 H 21 REMARK 3 ORIGIN FOR THE GROUP (A): -18.5154 -22.4854 198.7889 REMARK 3 T TENSOR REMARK 3 T11: 0.2085 T22: 0.0713 REMARK 3 T33: 0.3841 T12: 0.0217 REMARK 3 T13: 0.0265 T23: -0.0538 REMARK 3 L TENSOR REMARK 3 L11: 2.3799 L22: 6.7162 REMARK 3 L33: 2.0759 L12: 1.4160 REMARK 3 L13: -0.5647 L23: -0.5910 REMARK 3 S TENSOR REMARK 3 S11: 0.3971 S12: -0.1313 S13: 0.2809 REMARK 3 S21: 0.3070 S22: -0.4260 S23: 0.6227 REMARK 3 S31: -0.3371 S32: -0.2382 S33: 0.0289 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4JQD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-MAR-13. REMARK 100 THE DEPOSITION ID IS D_1000078371. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-NOV-10 REMARK 200 TEMPERATURE (KELVIN) : 120 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.93930 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20336 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 36.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.30400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3LFP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN WAS DIALYSED AGAINST THE REMARK 280 BUFFER CONTAINING 0.1 M NACL, 50 MM TRIS-HCL PH 8.2, 1 MM DTT, REMARK 280 AND 1 MM EDTA. CRYSTALLISATION CONDITIONS: 0.2 M SODIUM NITRATE, REMARK 280 0.1 M BIS-TRIS-PROPANE PH 7.5, 24 % (W/V) PEG3350, PROTEIN DIMER/ REMARK 280 DNA MOLAR RATIO 1:1, PROTEIN CONCENTRATION 1.46 MG/ML, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 41.06000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 64.03500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 41.06000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 64.03500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT THE BIOLOGICAL ASSEMBLY IS A PROTEIN REMARK 300 DIMER BOUND TO DNA DUPLEX. THE ASYMMETRIC UNIT CONTAINS TWO PROTEIN- REMARK 300 DNA COMPLEXES. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -58.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -59.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 95 REMARK 465 LYS A 96 REMARK 465 ALA A 97 REMARK 465 LYS A 98 REMARK 465 LYS B 95 REMARK 465 LYS B 96 REMARK 465 ALA B 97 REMARK 465 LYS B 98 REMARK 465 LYS E 98 REMARK 465 ARG F 94 REMARK 465 LYS F 95 REMARK 465 LYS F 96 REMARK 465 ALA F 97 REMARK 465 LYS F 98 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3LFP RELATED DB: PDB REMARK 900 FREE NON-COMPLEXED C.CSP231I PROTEIN DIMER REMARK 900 RELATED ID: 3LIS RELATED DB: PDB REMARK 900 FREE NON-COMPLEXED C.CSP231I PROTEIN DIMER (MONOCLINIC FORM) REMARK 900 RELATED ID: 4JCX RELATED DB: PDB REMARK 900 C.CSP231I OL OPERATOR COMPLEX REMARK 900 RELATED ID: 4JCY RELATED DB: PDB REMARK 900 C.CSP231I OR OPERATOR COMPLEX DBREF 4JQD A 1 98 UNP Q32WH4 Q32WH4_9ENTR 1 98 DBREF 4JQD B 1 98 UNP Q32WH4 Q32WH4_9ENTR 1 98 DBREF 4JQD E 1 98 UNP Q32WH4 Q32WH4_9ENTR 1 98 DBREF 4JQD F 1 98 UNP Q32WH4 Q32WH4_9ENTR 1 98 DBREF 4JQD C 1 21 PDB 4JQD 4JQD 1 21 DBREF 4JQD G 1 21 PDB 4JQD 4JQD 1 21 DBREF 4JQD D 1 21 PDB 4JQD 4JQD 1 21 DBREF 4JQD H 1 21 PDB 4JQD 4JQD 1 21 SEQRES 1 A 98 MET LEU ILE ARG ARG LEU LYS ASP ALA ARG LEU ARG ALA SEQRES 2 A 98 GLY ILE SER GLN GLU LYS LEU GLY VAL LEU ALA GLY ILE SEQRES 3 A 98 ASP GLU ALA SER ALA SER ALA ARG MET ASN GLN TYR GLU SEQRES 4 A 98 LYS GLY LYS HIS ALA PRO ASP PHE GLU MET ALA ASN ARG SEQRES 5 A 98 LEU ALA LYS VAL LEU LYS ILE PRO VAL SER TYR LEU TYR SEQRES 6 A 98 THR PRO GLU ASP ASP LEU ALA GLN ILE ILE LEU THR TRP SEQRES 7 A 98 ASN GLU LEU ASN GLU GLN GLU ARG LYS ARG ILE ASN PHE SEQRES 8 A 98 TYR ILE ARG LYS LYS ALA LYS SEQRES 1 B 98 MET LEU ILE ARG ARG LEU LYS ASP ALA ARG LEU ARG ALA SEQRES 2 B 98 GLY ILE SER GLN GLU LYS LEU GLY VAL LEU ALA GLY ILE SEQRES 3 B 98 ASP GLU ALA SER ALA SER ALA ARG MET ASN GLN TYR GLU SEQRES 4 B 98 LYS GLY LYS HIS ALA PRO ASP PHE GLU MET ALA ASN ARG SEQRES 5 B 98 LEU ALA LYS VAL LEU LYS ILE PRO VAL SER TYR LEU TYR SEQRES 6 B 98 THR PRO GLU ASP ASP LEU ALA GLN ILE ILE LEU THR TRP SEQRES 7 B 98 ASN GLU LEU ASN GLU GLN GLU ARG LYS ARG ILE ASN PHE SEQRES 8 B 98 TYR ILE ARG LYS LYS ALA LYS SEQRES 1 C 21 DA DC DA DC DT DA DA DG DG DA DA DA DA SEQRES 2 C 21 DC DT DT DA DG DT DA DA SEQRES 1 D 21 DT DT DA DC DT DA DA DG DT DT DT DT DC SEQRES 2 D 21 DC DT DT DA DG DT DG DT SEQRES 1 E 98 MET LEU ILE ARG ARG LEU LYS ASP ALA ARG LEU ARG ALA SEQRES 2 E 98 GLY ILE SER GLN GLU LYS LEU GLY VAL LEU ALA GLY ILE SEQRES 3 E 98 ASP GLU ALA SER ALA SER ALA ARG MET ASN GLN TYR GLU SEQRES 4 E 98 LYS GLY LYS HIS ALA PRO ASP PHE GLU MET ALA ASN ARG SEQRES 5 E 98 LEU ALA LYS VAL LEU LYS ILE PRO VAL SER TYR LEU TYR SEQRES 6 E 98 THR PRO GLU ASP ASP LEU ALA GLN ILE ILE LEU THR TRP SEQRES 7 E 98 ASN GLU LEU ASN GLU GLN GLU ARG LYS ARG ILE ASN PHE SEQRES 8 E 98 TYR ILE ARG LYS LYS ALA LYS SEQRES 1 F 98 MET LEU ILE ARG ARG LEU LYS ASP ALA ARG LEU ARG ALA SEQRES 2 F 98 GLY ILE SER GLN GLU LYS LEU GLY VAL LEU ALA GLY ILE SEQRES 3 F 98 ASP GLU ALA SER ALA SER ALA ARG MET ASN GLN TYR GLU SEQRES 4 F 98 LYS GLY LYS HIS ALA PRO ASP PHE GLU MET ALA ASN ARG SEQRES 5 F 98 LEU ALA LYS VAL LEU LYS ILE PRO VAL SER TYR LEU TYR SEQRES 6 F 98 THR PRO GLU ASP ASP LEU ALA GLN ILE ILE LEU THR TRP SEQRES 7 F 98 ASN GLU LEU ASN GLU GLN GLU ARG LYS ARG ILE ASN PHE SEQRES 8 F 98 TYR ILE ARG LYS LYS ALA LYS SEQRES 1 G 21 DA DC DA DC DT DA DA DG DG DA DA DA DA SEQRES 2 G 21 DC DT DT DA DG DT DA DA SEQRES 1 H 21 DT DT DA DC DT DA DA DG DT DT DT DT DC SEQRES 2 H 21 DC DT DT DA DG DT DG DT FORMUL 9 HOH *51(H2 O) HELIX 1 1 LEU A 2 GLY A 14 1 13 HELIX 2 2 SER A 16 ALA A 24 1 9 HELIX 3 3 ASP A 27 LYS A 40 1 14 HELIX 4 4 ASP A 46 LYS A 58 1 13 HELIX 5 5 PRO A 60 THR A 66 5 7 HELIX 6 6 GLU A 68 ASN A 79 1 12 HELIX 7 7 ASN A 82 ARG A 94 1 13 HELIX 8 8 LEU B 2 GLY B 14 1 13 HELIX 9 9 SER B 16 ALA B 24 1 9 HELIX 10 10 ASP B 27 LYS B 40 1 14 HELIX 11 11 ASP B 46 LEU B 57 1 12 HELIX 12 12 PRO B 60 THR B 66 5 7 HELIX 13 13 GLU B 68 GLU B 80 1 13 HELIX 14 14 ASN B 82 ILE B 93 1 12 HELIX 15 15 LEU E 2 GLY E 14 1 13 HELIX 16 16 SER E 16 ALA E 24 1 9 HELIX 17 17 SER E 30 LYS E 40 1 11 HELIX 18 18 ASP E 46 LYS E 58 1 13 HELIX 19 19 PRO E 60 THR E 66 5 7 HELIX 20 20 GLU E 68 ASN E 79 1 12 HELIX 21 21 ASN E 82 LYS E 95 1 14 HELIX 22 22 LEU F 2 GLY F 14 1 13 HELIX 23 23 SER F 16 ALA F 24 1 9 HELIX 24 24 ASP F 27 LYS F 40 1 14 HELIX 25 25 ASP F 46 LEU F 57 1 12 HELIX 26 26 PRO F 60 THR F 66 5 7 HELIX 27 27 GLU F 68 ASN F 79 1 12 HELIX 28 28 ASN F 82 ILE F 93 1 12 CRYST1 82.120 128.070 78.540 90.00 99.99 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012177 0.000000 0.002145 0.00000 SCALE2 0.000000 0.007808 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012928 0.00000