data_4JY4 # _entry.id 4JY4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4JY4 pdb_00004jy4 10.2210/pdb4jy4/pdb RCSB RCSB078650 ? ? WWPDB D_1000078650 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4JY5 . unspecified PDB 4JY6 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4JY4 _pdbx_database_status.recvd_initial_deposition_date 2013-03-29 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Julien, J.-P.' 1 'Diwanji, D.C.' 2 'Burton, D.R.' 3 'Wilson, I.A.' 4 # _citation.id primary _citation.title ;Broadly neutralizing antibody PGT121 allosterically modulates CD4 binding via recognition of the HIV-1 gp120 V3 base and multiple surrounding glycans. ; _citation.journal_abbrev 'Plos Pathog.' _citation.journal_volume 9 _citation.page_first e1003342 _citation.page_last e1003342 _citation.year 2013 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1553-7366 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23658524 _citation.pdbx_database_id_DOI 10.1371/journal.ppat.1003342 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Julien, J.P.' 1 ? primary 'Sok, D.' 2 ? primary 'Khayat, R.' 3 ? primary 'Lee, J.H.' 4 ? primary 'Doores, K.J.' 5 ? primary 'Walker, L.M.' 6 ? primary 'Ramos, A.' 7 ? primary 'Diwanji, D.C.' 8 ? primary 'Pejchal, R.' 9 ? primary 'Cupo, A.' 10 ? primary 'Katpally, U.' 11 ? primary 'Depetris, R.S.' 12 ? primary 'Stanfield, R.L.' 13 ? primary 'McBride, R.' 14 ? primary 'Marozsan, A.J.' 15 ? primary 'Paulson, J.C.' 16 ? primary 'Sanders, R.W.' 17 ? primary 'Moore, J.P.' 18 ? primary 'Burton, D.R.' 19 ? primary 'Poignard, P.' 20 ? primary 'Ward, A.B.' 21 ? primary 'Wilson, I.A.' 22 ? # _cell.entry_id 4JY4 _cell.length_a 64.970 _cell.length_b 65.720 _cell.length_c 159.210 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4JY4 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PGT121 heavy chain' 25169.230 1 ? ? Fab ? 2 polymer man 'PGT121 light chain' 22574.947 1 ? ? Fab ? 3 branched man ;N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose ; 1713.552 1 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 3 ? ? ? ? 5 water nat water 18.015 13 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;QMQLQESGPGLVKPSETLSLTCSVSGASISDSYWSWIRRSPGKGLEWIGYVHKSGDTNYSPSLKSRVNLSLDTSKNQVSL SLVAATAADSGKYYCARTLHGRRIYGIVAFNEWFTYFYMDVWGNGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCL VKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC ; ;QMQLQESGPGLVKPSETLSLTCSVSGASISDSYWSWIRRSPGKGLEWIGYVHKSGDTNYSPSLKSRVNLSLDTSKNQVSL SLVAATAADSGKYYCARTLHGRRIYGIVAFNEWFTYFYMDVWGNGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCL VKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC ; B ? 2 'polypeptide(L)' no no ;SDISVAPGETARISCGEKSLGSRAVQWYQHRAGQAPSLIIYNNQDRPSGIPERFSGSPDSPFGTTATLTITSVEAGDEAD YYCHIWDSRVPTKWVFGGGTTLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVET TTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS ; ;SDISVAPGETARISCGEKSLGSRAVQWYQHRAGQAPSLIIYNNQDRPSGIPERFSGSPDSPFGTTATLTITSVEAGDEAD YYCHIWDSRVPTKWVFGGGTTLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVET TTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 MET n 1 3 GLN n 1 4 LEU n 1 5 GLN n 1 6 GLU n 1 7 SER n 1 8 GLY n 1 9 PRO n 1 10 GLY n 1 11 LEU n 1 12 VAL n 1 13 LYS n 1 14 PRO n 1 15 SER n 1 16 GLU n 1 17 THR n 1 18 LEU n 1 19 SER n 1 20 LEU n 1 21 THR n 1 22 CYS n 1 23 SER n 1 24 VAL n 1 25 SER n 1 26 GLY n 1 27 ALA n 1 28 SER n 1 29 ILE n 1 30 SER n 1 31 ASP n 1 32 SER n 1 33 TYR n 1 34 TRP n 1 35 SER n 1 36 TRP n 1 37 ILE n 1 38 ARG n 1 39 ARG n 1 40 SER n 1 41 PRO n 1 42 GLY n 1 43 LYS n 1 44 GLY n 1 45 LEU n 1 46 GLU n 1 47 TRP n 1 48 ILE n 1 49 GLY n 1 50 TYR n 1 51 VAL n 1 52 HIS n 1 53 LYS n 1 54 SER n 1 55 GLY n 1 56 ASP n 1 57 THR n 1 58 ASN n 1 59 TYR n 1 60 SER n 1 61 PRO n 1 62 SER n 1 63 LEU n 1 64 LYS n 1 65 SER n 1 66 ARG n 1 67 VAL n 1 68 ASN n 1 69 LEU n 1 70 SER n 1 71 LEU n 1 72 ASP n 1 73 THR n 1 74 SER n 1 75 LYS n 1 76 ASN n 1 77 GLN n 1 78 VAL n 1 79 SER n 1 80 LEU n 1 81 SER n 1 82 LEU n 1 83 VAL n 1 84 ALA n 1 85 ALA n 1 86 THR n 1 87 ALA n 1 88 ALA n 1 89 ASP n 1 90 SER n 1 91 GLY n 1 92 LYS n 1 93 TYR n 1 94 TYR n 1 95 CYS n 1 96 ALA n 1 97 ARG n 1 98 THR n 1 99 LEU n 1 100 HIS n 1 101 GLY n 1 102 ARG n 1 103 ARG n 1 104 ILE n 1 105 TYR n 1 106 GLY n 1 107 ILE n 1 108 VAL n 1 109 ALA n 1 110 PHE n 1 111 ASN n 1 112 GLU n 1 113 TRP n 1 114 PHE n 1 115 THR n 1 116 TYR n 1 117 PHE n 1 118 TYR n 1 119 MET n 1 120 ASP n 1 121 VAL n 1 122 TRP n 1 123 GLY n 1 124 ASN n 1 125 GLY n 1 126 THR n 1 127 GLN n 1 128 VAL n 1 129 THR n 1 130 VAL n 1 131 SER n 1 132 SER n 1 133 ALA n 1 134 SER n 1 135 THR n 1 136 LYS n 1 137 GLY n 1 138 PRO n 1 139 SER n 1 140 VAL n 1 141 PHE n 1 142 PRO n 1 143 LEU n 1 144 ALA n 1 145 PRO n 1 146 SER n 1 147 SER n 1 148 LYS n 1 149 SER n 1 150 THR n 1 151 SER n 1 152 GLY n 1 153 GLY n 1 154 THR n 1 155 ALA n 1 156 ALA n 1 157 LEU n 1 158 GLY n 1 159 CYS n 1 160 LEU n 1 161 VAL n 1 162 LYS n 1 163 ASP n 1 164 TYR n 1 165 PHE n 1 166 PRO n 1 167 GLU n 1 168 PRO n 1 169 VAL n 1 170 THR n 1 171 VAL n 1 172 SER n 1 173 TRP n 1 174 ASN n 1 175 SER n 1 176 GLY n 1 177 ALA n 1 178 LEU n 1 179 THR n 1 180 SER n 1 181 GLY n 1 182 VAL n 1 183 HIS n 1 184 THR n 1 185 PHE n 1 186 PRO n 1 187 ALA n 1 188 VAL n 1 189 LEU n 1 190 GLN n 1 191 SER n 1 192 SER n 1 193 GLY n 1 194 LEU n 1 195 TYR n 1 196 SER n 1 197 LEU n 1 198 SER n 1 199 SER n 1 200 VAL n 1 201 VAL n 1 202 THR n 1 203 VAL n 1 204 PRO n 1 205 SER n 1 206 SER n 1 207 SER n 1 208 LEU n 1 209 GLY n 1 210 THR n 1 211 GLN n 1 212 THR n 1 213 TYR n 1 214 ILE n 1 215 CYS n 1 216 ASN n 1 217 VAL n 1 218 ASN n 1 219 HIS n 1 220 LYS n 1 221 PRO n 1 222 SER n 1 223 ASN n 1 224 THR n 1 225 LYS n 1 226 VAL n 1 227 ASP n 1 228 LYS n 1 229 ARG n 1 230 VAL n 1 231 GLU n 1 232 PRO n 1 233 LYS n 1 234 SER n 1 235 CYS n 2 1 SER n 2 2 ASP n 2 3 ILE n 2 4 SER n 2 5 VAL n 2 6 ALA n 2 7 PRO n 2 8 GLY n 2 9 GLU n 2 10 THR n 2 11 ALA n 2 12 ARG n 2 13 ILE n 2 14 SER n 2 15 CYS n 2 16 GLY n 2 17 GLU n 2 18 LYS n 2 19 SER n 2 20 LEU n 2 21 GLY n 2 22 SER n 2 23 ARG n 2 24 ALA n 2 25 VAL n 2 26 GLN n 2 27 TRP n 2 28 TYR n 2 29 GLN n 2 30 HIS n 2 31 ARG n 2 32 ALA n 2 33 GLY n 2 34 GLN n 2 35 ALA n 2 36 PRO n 2 37 SER n 2 38 LEU n 2 39 ILE n 2 40 ILE n 2 41 TYR n 2 42 ASN n 2 43 ASN n 2 44 GLN n 2 45 ASP n 2 46 ARG n 2 47 PRO n 2 48 SER n 2 49 GLY n 2 50 ILE n 2 51 PRO n 2 52 GLU n 2 53 ARG n 2 54 PHE n 2 55 SER n 2 56 GLY n 2 57 SER n 2 58 PRO n 2 59 ASP n 2 60 SER n 2 61 PRO n 2 62 PHE n 2 63 GLY n 2 64 THR n 2 65 THR n 2 66 ALA n 2 67 THR n 2 68 LEU n 2 69 THR n 2 70 ILE n 2 71 THR n 2 72 SER n 2 73 VAL n 2 74 GLU n 2 75 ALA n 2 76 GLY n 2 77 ASP n 2 78 GLU n 2 79 ALA n 2 80 ASP n 2 81 TYR n 2 82 TYR n 2 83 CYS n 2 84 HIS n 2 85 ILE n 2 86 TRP n 2 87 ASP n 2 88 SER n 2 89 ARG n 2 90 VAL n 2 91 PRO n 2 92 THR n 2 93 LYS n 2 94 TRP n 2 95 VAL n 2 96 PHE n 2 97 GLY n 2 98 GLY n 2 99 GLY n 2 100 THR n 2 101 THR n 2 102 LEU n 2 103 THR n 2 104 VAL n 2 105 LEU n 2 106 GLY n 2 107 GLN n 2 108 PRO n 2 109 LYS n 2 110 ALA n 2 111 ALA n 2 112 PRO n 2 113 SER n 2 114 VAL n 2 115 THR n 2 116 LEU n 2 117 PHE n 2 118 PRO n 2 119 PRO n 2 120 SER n 2 121 SER n 2 122 GLU n 2 123 GLU n 2 124 LEU n 2 125 GLN n 2 126 ALA n 2 127 ASN n 2 128 LYS n 2 129 ALA n 2 130 THR n 2 131 LEU n 2 132 VAL n 2 133 CYS n 2 134 LEU n 2 135 ILE n 2 136 SER n 2 137 ASP n 2 138 PHE n 2 139 TYR n 2 140 PRO n 2 141 GLY n 2 142 ALA n 2 143 VAL n 2 144 THR n 2 145 VAL n 2 146 ALA n 2 147 TRP n 2 148 LYS n 2 149 ALA n 2 150 ASP n 2 151 SER n 2 152 SER n 2 153 PRO n 2 154 VAL n 2 155 LYS n 2 156 ALA n 2 157 GLY n 2 158 VAL n 2 159 GLU n 2 160 THR n 2 161 THR n 2 162 THR n 2 163 PRO n 2 164 SER n 2 165 LYS n 2 166 GLN n 2 167 SER n 2 168 ASN n 2 169 ASN n 2 170 LYS n 2 171 TYR n 2 172 ALA n 2 173 ALA n 2 174 SER n 2 175 SER n 2 176 TYR n 2 177 LEU n 2 178 SER n 2 179 LEU n 2 180 THR n 2 181 PRO n 2 182 GLU n 2 183 GLN n 2 184 TRP n 2 185 LYS n 2 186 SER n 2 187 HIS n 2 188 LYS n 2 189 SER n 2 190 TYR n 2 191 SER n 2 192 CYS n 2 193 GLN n 2 194 VAL n 2 195 THR n 2 196 HIS n 2 197 GLU n 2 198 GLY n 2 199 SER n 2 200 THR n 2 201 VAL n 2 202 GLU n 2 203 LYS n 2 204 THR n 2 205 VAL n 2 206 ALA n 2 207 PRO n 2 208 THR n 2 209 GLU n 2 210 CYS n 2 211 SER n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? human ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'HEK 293F' ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? human ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'HEK 293F' ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 PDB 4JY4 4JY4 2 1 ;SDISVAPGETARISCGEKSLGSRAVQWYQHRAGQAPSLIIYNNQDRPSGIPERFSGSPDSPFGTTATLTITSVEAGDEAD YYCHIWDSRVPTKWVFGGGTTLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVET TTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS ; ? 2 PDB 4JY4 4JY4 1 1 ;QMQLQESGPGLVKPSETLSLTCSVSGASISDSYWSWIRRSPGKGLEWIGYVHKSGDTNYSPSLKSRVNLSLDTSKNQVSL SLVAATAADSGKYYCARTLHGRRIYGIVAFNEWFTYFYMDVWGNGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCL VKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC ; ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4JY4 A 1 ? 211 ? 4JY4 8 ? 213 ? 8 213 2 2 4JY4 B 1 ? 235 ? 4JY4 1 ? 214 ? 1 214 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SIA 'D-saccharide, alpha linking' . 'N-acetyl-alpha-neuraminic acid' 'N-acetylneuraminic acid; sialic acid; alpha-sialic acid; O-SIALIC ACID' 'C11 H19 N O9' 309.270 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4JY4 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.56 _exptl_crystal.density_percent_sol 65.45 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1 M HEPES, pH 7.5, 30% v/v PEG400, 5% w/v PEG3000, 10% v/v glycerol, VAPOR DIFFUSION, SITTING DROP, temperature 293K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.pdbx_collection_date 2011-01-18 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Side scattering bent cube-root I-beam single crystal, asymmetric cut 4.965 degrees' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.979 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4JY4 _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 40 _reflns.d_resolution_high 2.8 _reflns.number_obs 17409 _reflns.number_all 17491 _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.088 _reflns.pdbx_netI_over_sigmaI 19.8 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.8 _reflns_shell.d_res_low 2.9 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.484 _reflns_shell.meanI_over_sigI_obs 3.5 _reflns_shell.pdbx_redundancy 7.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4JY4 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 17353 _refine.ls_number_reflns_all 17491 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.915 _refine.ls_d_res_high 2.800 _refine.ls_percent_reflns_obs 99.89 _refine.ls_R_factor_obs 0.1917 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1894 _refine.ls_R_factor_R_free 0.2341 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.01 _refine.ls_number_reflns_R_free 870 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -3.3525 _refine.aniso_B[2][2] 10.1945 _refine.aniso_B[3][3] -6.8420 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.357 _refine.solvent_model_param_bsol 20.370 _refine.pdbx_solvent_vdw_probe_radii 1.00 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.73 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 4JY6' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.76 _refine.pdbx_overall_phase_error 21.65 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3319 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 134 _refine_hist.number_atoms_solvent 13 _refine_hist.number_atoms_total 3466 _refine_hist.d_res_high 2.800 _refine_hist.d_res_low 19.915 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.010 ? ? 3550 'X-RAY DIFFRACTION' ? f_angle_d 1.443 ? ? 4851 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 23.928 ? ? 1299 'X-RAY DIFFRACTION' ? f_chiral_restr 0.201 ? ? 571 'X-RAY DIFFRACTION' ? f_plane_restr 0.006 ? ? 597 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.8000 2.9749 2681 0.2727 100.00 0.3495 . . 148 . . . . 'X-RAY DIFFRACTION' . 2.9749 3.2037 2674 0.2341 100.00 0.2665 . . 151 . . . . 'X-RAY DIFFRACTION' . 3.2037 3.5245 2726 0.2011 100.00 0.2895 . . 136 . . . . 'X-RAY DIFFRACTION' . 3.5245 4.0308 2748 0.1960 100.00 0.2405 . . 139 . . . . 'X-RAY DIFFRACTION' . 4.0308 5.0646 2760 0.1497 100.00 0.1910 . . 155 . . . . 'X-RAY DIFFRACTION' . 5.0646 19.9151 2894 0.1754 100.00 0.2030 . . 141 . . . . # _struct.entry_id 4JY4 _struct.title 'Crystal structure of human Fab PGT121, a broadly reactive and potent HIV-1 neutralizing antibody' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4JY4 _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text 'Broadly neutralizing antibody against HIV-1, HIV-1 Env gp120 subunit, IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 4 SER A 28 ? SER A 32 ? SER B 28 SER B 32 5 ? 5 HELX_P HELX_P2 5 SER A 60 ? SER A 65 ? SER B 60 SER B 65 1 ? 6 HELX_P HELX_P3 6 THR A 86 ? SER A 90 ? THR B 83 SER B 87 5 ? 5 HELX_P HELX_P4 7 ILE A 107 D ASN A 111 H ILE B 100 ASN B 100 5 ? 5 HELX_P HELX_P5 8 SER A 175 ? ALA A 177 ? SER B 154 ALA B 156 5 ? 3 HELX_P HELX_P6 9 SER A 206 ? GLY A 209 ? SER B 185 GLY B 188 5 ? 4 HELX_P HELX_P7 10 LYS A 220 ? ASN A 223 ? LYS B 199 ASN B 202 5 ? 4 HELX_P HELX_P8 1 GLU B 74 ? GLU B 78 ? GLU A 79 GLU A 83 5 ? 5 HELX_P HELX_P9 2 SER B 120 ? ALA B 126 ? SER A 122 ALA A 128 1 ? 7 HELX_P HELX_P10 3 THR B 180 ? HIS B 187 ? THR A 182 HIS A 189 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 22 SG ? ? ? 1_555 A CYS 95 SG ? ? B CYS 22 B CYS 92 1_555 ? ? ? ? ? ? ? 2.062 ? ? disulf2 disulf ? ? A CYS 159 SG ? ? ? 1_555 A CYS 215 SG ? ? B CYS 138 B CYS 194 1_555 ? ? ? ? ? ? ? 2.021 ? ? disulf3 disulf ? ? B CYS 15 SG ? ? ? 1_555 B CYS 83 SG ? ? A CYS 23 A CYS 88 1_555 ? ? ? ? ? ? ? 2.041 ? ? disulf4 disulf ? ? B CYS 133 SG ? ? ? 1_555 B CYS 192 SG ? ? A CYS 135 A CYS 194 1_555 ? ? ? ? ? ? ? 2.022 ? ? covale1 covale one ? A ASN 124 ND2 ? ? ? 1_555 C NAG . C1 ? ? B ASN 103 C NAG 1 1_555 ? ? ? ? ? ? ? 1.431 ? N-Glycosylation covale2 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.439 ? ? covale3 covale both ? C NAG . O6 ? ? ? 1_555 C FUC . C1 ? ? C NAG 1 C FUC 9 1_555 ? ? ? ? ? ? ? 1.444 ? ? covale4 covale both ? C NAG . O4 ? ? ? 1_555 C BMA . C1 ? ? C NAG 2 C BMA 3 1_555 ? ? ? ? ? ? ? 1.431 ? ? covale5 covale both ? C BMA . O3 ? ? ? 1_555 C MAN . C1 ? ? C BMA 3 C MAN 4 1_555 ? ? ? ? ? ? ? 1.430 ? ? covale6 covale both ? C BMA . O6 ? ? ? 1_555 C MAN . C1 ? ? C BMA 3 C MAN 8 1_555 ? ? ? ? ? ? ? 1.452 ? ? covale7 covale both ? C MAN . O2 ? ? ? 1_555 C NAG . C1 ? ? C MAN 4 C NAG 5 1_555 ? ? ? ? ? ? ? 1.423 ? ? covale8 covale both ? C NAG . O4 ? ? ? 1_555 C GAL . C1 ? ? C NAG 5 C GAL 6 1_555 ? ? ? ? ? ? ? 1.424 ? ? covale9 covale both ? C GAL . O6 ? ? ? 1_555 C SIA . C2 ? ? C GAL 6 C SIA 7 1_555 ? ? ? ? ? ? ? 1.456 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PHE 165 A . ? PHE 144 B PRO 166 A ? PRO 145 B 1 -4.56 2 GLU 167 A . ? GLU 146 B PRO 168 A ? PRO 147 B 1 2.85 3 SER 60 B . A SER 67 A PRO 61 B B PRO 67 A 1 -0.85 4 TYR 139 B . ? TYR 141 A PRO 140 B ? PRO 142 A 1 1.84 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 3 ? C ? 4 ? D ? 4 ? E ? 4 ? F ? 4 ? G ? 6 ? H ? 4 ? I ? 4 ? J ? 4 ? K ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel G 1 2 ? parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel G 4 5 ? anti-parallel G 5 6 ? anti-parallel H 1 2 ? parallel H 2 3 ? anti-parallel H 3 4 ? anti-parallel I 1 2 ? anti-parallel I 2 3 ? anti-parallel I 3 4 ? anti-parallel J 1 2 ? anti-parallel J 2 3 ? anti-parallel J 3 4 ? anti-parallel K 1 2 ? anti-parallel K 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE B 3 ? VAL B 5 ? ILE A 11 VAL A 13 A 2 GLY B 97 ? VAL B 104 ? GLY A 99 VAL A 106 A 3 ALA B 79 ? ASP B 87 ? ALA A 84 ASP A 92 A 4 ARG B 23 ? HIS B 30 ? ARG A 31 HIS A 38 A 5 SER B 37 ? ILE B 40 ? SER A 45 ILE A 48 B 1 ALA B 11 ? LYS B 18 ? ALA A 19 LYS A 26 B 2 THR B 65 ? ILE B 70 ? THR A 70 ILE A 75 B 3 PHE B 54 ? SER B 55 ? PHE A 62 SER A 63 C 1 SER B 113 ? PHE B 117 ? SER A 115 PHE A 119 C 2 ALA B 129 ? PHE B 138 ? ALA A 131 PHE A 140 C 3 TYR B 171 ? LEU B 179 ? TYR A 173 LEU A 181 C 4 VAL B 158 ? THR B 160 ? VAL A 160 THR A 162 D 1 SER B 113 ? PHE B 117 ? SER A 115 PHE A 119 D 2 ALA B 129 ? PHE B 138 ? ALA A 131 PHE A 140 D 3 TYR B 171 ? LEU B 179 ? TYR A 173 LEU A 181 D 4 SER B 164 ? LYS B 165 ? SER A 166 LYS A 167 E 1 SER B 152 ? PRO B 153 ? SER A 154 PRO A 155 E 2 THR B 144 ? ALA B 149 ? THR A 146 ALA A 151 E 3 TYR B 190 ? HIS B 196 ? TYR A 192 HIS A 198 E 4 SER B 199 ? VAL B 205 ? SER A 201 VAL A 207 F 1 GLN A 3 ? SER A 7 ? GLN B 3 SER B 7 F 2 LEU A 18 ? SER A 25 ? LEU B 18 SER B 25 F 3 GLN A 77 ? LEU A 82 ? GLN B 77 LEU B 82 F 4 VAL A 67 ? ASP A 72 ? VAL B 67 ASP B 72 G 1 LEU A 11 ? VAL A 12 ? LEU B 11 VAL B 12 G 2 THR A 126 ? VAL A 130 ? THR B 105 VAL B 109 G 3 GLY A 91 ? ILE A 104 A GLY B 88 ILE B 100 G 4 TYR A 33 ? ARG A 39 ? TYR B 33 ARG B 39 G 5 LEU A 45 ? VAL A 51 ? LEU B 45 VAL B 51 G 6 ASN A 58 ? TYR A 59 ? ASN B 58 TYR B 59 H 1 LEU A 11 ? VAL A 12 ? LEU B 11 VAL B 12 H 2 THR A 126 ? VAL A 130 ? THR B 105 VAL B 109 H 3 GLY A 91 ? ILE A 104 A GLY B 88 ILE B 100 H 4 TRP A 113 J TRP A 122 ? TRP B 100 TRP B 101 I 1 SER A 139 ? SER A 146 ? SER B 118 SER B 125 I 2 THR A 154 ? TYR A 164 ? THR B 133 TYR B 143 I 3 TYR A 195 ? PRO A 204 ? TYR B 174 PRO B 183 I 4 VAL A 182 ? THR A 184 ? VAL B 161 THR B 163 J 1 SER A 139 ? SER A 146 ? SER B 118 SER B 125 J 2 THR A 154 ? TYR A 164 ? THR B 133 TYR B 143 J 3 TYR A 195 ? PRO A 204 ? TYR B 174 PRO B 183 J 4 VAL A 188 ? LEU A 189 ? VAL B 167 LEU B 168 K 1 THR A 170 ? TRP A 173 ? THR B 149 TRP B 152 K 2 ILE A 214 ? HIS A 219 ? ILE B 193 HIS B 198 K 3 THR A 224 ? ARG A 229 ? THR B 203 ARG B 208 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE B 3 ? N ILE A 11 O THR B 103 ? O THR A 105 A 2 3 O GLY B 99 ? O GLY A 101 N TYR B 81 ? N TYR A 86 A 3 4 O ASP B 80 ? O ASP A 85 N HIS B 30 ? N HIS A 38 A 4 5 N TRP B 27 ? N TRP A 35 O ILE B 40 ? O ILE A 48 B 1 2 N ALA B 11 ? N ALA A 19 O ILE B 70 ? O ILE A 75 B 2 3 O THR B 69 ? O THR A 74 N SER B 55 ? N SER A 63 C 1 2 N THR B 115 ? N THR A 117 O LEU B 134 ? O LEU A 136 C 2 3 N CYS B 133 ? N CYS A 135 O SER B 175 ? O SER A 177 C 3 4 O TYR B 176 ? O TYR A 178 N GLU B 159 ? N GLU A 161 D 1 2 N THR B 115 ? N THR A 117 O LEU B 134 ? O LEU A 136 D 2 3 N CYS B 133 ? N CYS A 135 O SER B 175 ? O SER A 177 D 3 4 O ALA B 172 ? O ALA A 174 N SER B 164 ? N SER A 166 E 1 2 O SER B 152 ? O SER A 154 N ALA B 149 ? N ALA A 151 E 2 3 N THR B 144 ? N THR A 146 O THR B 195 ? O THR A 197 E 3 4 N VAL B 194 ? N VAL A 196 O VAL B 201 ? O VAL A 203 F 1 2 N SER A 7 ? N SER B 7 O THR A 21 ? O THR B 21 F 2 3 N CYS A 22 ? N CYS B 22 O VAL A 78 ? O VAL B 78 F 3 4 O GLN A 77 ? O GLN B 77 N ASP A 72 ? N ASP B 72 G 1 2 N VAL A 12 ? N VAL B 12 O THR A 129 ? O THR B 108 G 2 3 O VAL A 128 ? O VAL B 107 N GLY A 91 ? N GLY B 88 G 3 4 O TYR A 94 ? O TYR B 91 N ILE A 37 ? N ILE B 37 G 4 5 N ARG A 38 ? N ARG B 38 O GLU A 46 ? O GLU B 46 G 5 6 N TYR A 50 ? N TYR B 50 O ASN A 58 ? O ASN B 58 H 1 2 N VAL A 12 ? N VAL B 12 O THR A 129 ? O THR B 108 H 2 3 O VAL A 128 ? O VAL B 107 N GLY A 91 ? N GLY B 88 H 3 4 N LEU A 99 ? N LEU B 96 O TYR A 118 O O TYR B 100 I 1 2 N LEU A 143 ? N LEU B 122 O GLY A 158 ? O GLY B 137 I 2 3 N VAL A 161 ? N VAL B 140 O LEU A 197 ? O LEU B 176 I 3 4 O VAL A 200 ? O VAL B 179 N HIS A 183 ? N HIS B 162 J 1 2 N LEU A 143 ? N LEU B 122 O GLY A 158 ? O GLY B 137 J 2 3 N VAL A 161 ? N VAL B 140 O LEU A 197 ? O LEU B 176 J 3 4 O SER A 196 ? O SER B 175 N VAL A 188 ? N VAL B 167 K 1 2 N THR A 170 ? N THR B 149 O ASN A 218 ? O ASN B 197 K 2 3 N HIS A 219 ? N HIS B 198 O THR A 224 ? O THR B 203 # _database_PDB_matrix.entry_id 4JY4 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4JY4 _atom_sites.fract_transf_matrix[1][1] 0.015392 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015216 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006281 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 1 1 GLN GLN B . n A 1 2 MET 2 2 2 MET MET B . n A 1 3 GLN 3 3 3 GLN GLN B . n A 1 4 LEU 4 4 4 LEU LEU B . n A 1 5 GLN 5 5 5 GLN GLN B . n A 1 6 GLU 6 6 6 GLU GLU B . n A 1 7 SER 7 7 7 SER SER B . n A 1 8 GLY 8 8 8 GLY GLY B . n A 1 9 PRO 9 9 9 PRO PRO B . n A 1 10 GLY 10 10 10 GLY GLY B . n A 1 11 LEU 11 11 11 LEU LEU B . n A 1 12 VAL 12 12 12 VAL VAL B . n A 1 13 LYS 13 13 13 LYS LYS B . n A 1 14 PRO 14 14 14 PRO PRO B . n A 1 15 SER 15 15 15 SER SER B . n A 1 16 GLU 16 16 16 GLU GLU B . n A 1 17 THR 17 17 17 THR THR B . n A 1 18 LEU 18 18 18 LEU LEU B . n A 1 19 SER 19 19 19 SER SER B . n A 1 20 LEU 20 20 20 LEU LEU B . n A 1 21 THR 21 21 21 THR THR B . n A 1 22 CYS 22 22 22 CYS CYS B . n A 1 23 SER 23 23 23 SER SER B . n A 1 24 VAL 24 24 24 VAL VAL B . n A 1 25 SER 25 25 25 SER SER B . n A 1 26 GLY 26 26 26 GLY GLY B . n A 1 27 ALA 27 27 27 ALA ALA B . n A 1 28 SER 28 28 28 SER SER B . n A 1 29 ILE 29 29 29 ILE ILE B . n A 1 30 SER 30 30 30 SER SER B . n A 1 31 ASP 31 31 31 ASP ASP B . n A 1 32 SER 32 32 32 SER SER B . n A 1 33 TYR 33 33 33 TYR TYR B . n A 1 34 TRP 34 34 34 TRP TRP B . n A 1 35 SER 35 35 35 SER SER B . n A 1 36 TRP 36 36 36 TRP TRP B . n A 1 37 ILE 37 37 37 ILE ILE B . n A 1 38 ARG 38 38 38 ARG ARG B . n A 1 39 ARG 39 39 39 ARG ARG B . n A 1 40 SER 40 40 40 SER SER B . n A 1 41 PRO 41 41 41 PRO PRO B . n A 1 42 GLY 42 42 42 GLY GLY B . n A 1 43 LYS 43 43 43 LYS LYS B . n A 1 44 GLY 44 44 44 GLY GLY B . n A 1 45 LEU 45 45 45 LEU LEU B . n A 1 46 GLU 46 46 46 GLU GLU B . n A 1 47 TRP 47 47 47 TRP TRP B . n A 1 48 ILE 48 48 48 ILE ILE B . n A 1 49 GLY 49 49 49 GLY GLY B . n A 1 50 TYR 50 50 50 TYR TYR B . n A 1 51 VAL 51 51 51 VAL VAL B . n A 1 52 HIS 52 52 52 HIS HIS B . n A 1 53 LYS 53 53 53 LYS LYS B . n A 1 54 SER 54 54 54 SER SER B . n A 1 55 GLY 55 55 55 GLY GLY B . n A 1 56 ASP 56 56 56 ASP ASP B . n A 1 57 THR 57 57 57 THR THR B . n A 1 58 ASN 58 58 58 ASN ASN B . n A 1 59 TYR 59 59 59 TYR TYR B . n A 1 60 SER 60 60 60 SER SER B . n A 1 61 PRO 61 61 61 PRO PRO B . n A 1 62 SER 62 62 62 SER SER B . n A 1 63 LEU 63 63 63 LEU LEU B . n A 1 64 LYS 64 64 64 LYS LYS B . n A 1 65 SER 65 65 65 SER SER B . n A 1 66 ARG 66 66 66 ARG ARG B . n A 1 67 VAL 67 67 67 VAL VAL B . n A 1 68 ASN 68 68 68 ASN ASN B . n A 1 69 LEU 69 69 69 LEU LEU B . n A 1 70 SER 70 70 70 SER SER B . n A 1 71 LEU 71 71 71 LEU LEU B . n A 1 72 ASP 72 72 72 ASP ASP B . n A 1 73 THR 73 73 73 THR THR B . n A 1 74 SER 74 74 74 SER SER B . n A 1 75 LYS 75 75 75 LYS LYS B . n A 1 76 ASN 76 76 76 ASN ASN B . n A 1 77 GLN 77 77 77 GLN GLN B . n A 1 78 VAL 78 78 78 VAL VAL B . n A 1 79 SER 79 79 79 SER SER B . n A 1 80 LEU 80 80 80 LEU LEU B . n A 1 81 SER 81 81 81 SER SER B . n A 1 82 LEU 82 82 82 LEU LEU B . n A 1 83 VAL 83 82 82 VAL VAL B A n A 1 84 ALA 84 82 82 ALA ALA B B n A 1 85 ALA 85 82 82 ALA ALA B C n A 1 86 THR 86 83 83 THR THR B . n A 1 87 ALA 87 84 84 ALA ALA B . n A 1 88 ALA 88 85 85 ALA ALA B . n A 1 89 ASP 89 86 86 ASP ASP B . n A 1 90 SER 90 87 87 SER SER B . n A 1 91 GLY 91 88 88 GLY GLY B . n A 1 92 LYS 92 89 89 LYS LYS B . n A 1 93 TYR 93 90 90 TYR TYR B . n A 1 94 TYR 94 91 91 TYR TYR B . n A 1 95 CYS 95 92 92 CYS CYS B . n A 1 96 ALA 96 93 93 ALA ALA B . n A 1 97 ARG 97 94 94 ARG ARG B . n A 1 98 THR 98 95 95 THR THR B . n A 1 99 LEU 99 96 96 LEU LEU B . n A 1 100 HIS 100 97 97 HIS HIS B . n A 1 101 GLY 101 98 98 GLY GLY B . n A 1 102 ARG 102 99 99 ARG ARG B . n A 1 103 ARG 103 100 100 ARG ARG B . n A 1 104 ILE 104 100 100 ILE ILE B A n A 1 105 TYR 105 100 100 TYR TYR B B n A 1 106 GLY 106 100 100 GLY GLY B C n A 1 107 ILE 107 100 100 ILE ILE B D n A 1 108 VAL 108 100 100 VAL VAL B E n A 1 109 ALA 109 100 100 ALA ALA B F n A 1 110 PHE 110 100 100 PHE PHE B G n A 1 111 ASN 111 100 100 ASN ASN B H n A 1 112 GLU 112 100 100 GLU GLU B I n A 1 113 TRP 113 100 100 TRP TRP B J n A 1 114 PHE 114 100 100 PHE PHE B K n A 1 115 THR 115 100 100 THR THR B L n A 1 116 TYR 116 100 100 TYR TYR B M n A 1 117 PHE 117 100 100 PHE PHE B N n A 1 118 TYR 118 100 100 TYR TYR B O n A 1 119 MET 119 100 100 MET MET B P n A 1 120 ASP 120 100 100 ASP ASP B Q n A 1 121 VAL 121 100 100 VAL VAL B R n A 1 122 TRP 122 101 101 TRP TRP B . n A 1 123 GLY 123 102 102 GLY GLY B . n A 1 124 ASN 124 103 103 ASN ASN B . n A 1 125 GLY 125 104 104 GLY GLY B . n A 1 126 THR 126 105 105 THR THR B . n A 1 127 GLN 127 106 106 GLN GLN B . n A 1 128 VAL 128 107 107 VAL VAL B . n A 1 129 THR 129 108 108 THR THR B . n A 1 130 VAL 130 109 109 VAL VAL B . n A 1 131 SER 131 110 110 SER SER B . n A 1 132 SER 132 111 111 SER SER B . n A 1 133 ALA 133 112 112 ALA ALA B . n A 1 134 SER 134 113 113 SER SER B . n A 1 135 THR 135 114 114 THR THR B . n A 1 136 LYS 136 115 115 LYS LYS B . n A 1 137 GLY 137 116 116 GLY GLY B . n A 1 138 PRO 138 117 117 PRO PRO B . n A 1 139 SER 139 118 118 SER SER B . n A 1 140 VAL 140 119 119 VAL VAL B . n A 1 141 PHE 141 120 120 PHE PHE B . n A 1 142 PRO 142 121 121 PRO PRO B . n A 1 143 LEU 143 122 122 LEU LEU B . n A 1 144 ALA 144 123 123 ALA ALA B . n A 1 145 PRO 145 124 124 PRO PRO B . n A 1 146 SER 146 125 125 SER SER B . n A 1 147 SER 147 126 126 SER SER B . n A 1 148 LYS 148 127 127 LYS LYS B . n A 1 149 SER 149 128 128 SER SER B . n A 1 150 THR 150 129 129 THR THR B . n A 1 151 SER 151 130 130 SER SER B . n A 1 152 GLY 152 131 131 GLY GLY B . n A 1 153 GLY 153 132 132 GLY GLY B . n A 1 154 THR 154 133 133 THR THR B . n A 1 155 ALA 155 134 134 ALA ALA B . n A 1 156 ALA 156 135 135 ALA ALA B . n A 1 157 LEU 157 136 136 LEU LEU B . n A 1 158 GLY 158 137 137 GLY GLY B . n A 1 159 CYS 159 138 138 CYS CYS B . n A 1 160 LEU 160 139 139 LEU LEU B . n A 1 161 VAL 161 140 140 VAL VAL B . n A 1 162 LYS 162 141 141 LYS LYS B . n A 1 163 ASP 163 142 142 ASP ASP B . n A 1 164 TYR 164 143 143 TYR TYR B . n A 1 165 PHE 165 144 144 PHE PHE B . n A 1 166 PRO 166 145 145 PRO PRO B . n A 1 167 GLU 167 146 146 GLU GLU B . n A 1 168 PRO 168 147 147 PRO PRO B . n A 1 169 VAL 169 148 148 VAL VAL B . n A 1 170 THR 170 149 149 THR THR B . n A 1 171 VAL 171 150 150 VAL VAL B . n A 1 172 SER 172 151 151 SER SER B . n A 1 173 TRP 173 152 152 TRP TRP B . n A 1 174 ASN 174 153 153 ASN ASN B . n A 1 175 SER 175 154 154 SER SER B . n A 1 176 GLY 176 155 155 GLY GLY B . n A 1 177 ALA 177 156 156 ALA ALA B . n A 1 178 LEU 178 157 157 LEU LEU B . n A 1 179 THR 179 158 158 THR THR B . n A 1 180 SER 180 159 159 SER SER B . n A 1 181 GLY 181 160 160 GLY GLY B . n A 1 182 VAL 182 161 161 VAL VAL B . n A 1 183 HIS 183 162 162 HIS HIS B . n A 1 184 THR 184 163 163 THR THR B . n A 1 185 PHE 185 164 164 PHE PHE B . n A 1 186 PRO 186 165 165 PRO PRO B . n A 1 187 ALA 187 166 166 ALA ALA B . n A 1 188 VAL 188 167 167 VAL VAL B . n A 1 189 LEU 189 168 168 LEU LEU B . n A 1 190 GLN 190 169 169 GLN GLN B . n A 1 191 SER 191 170 170 SER SER B . n A 1 192 SER 192 171 171 SER SER B . n A 1 193 GLY 193 172 172 GLY GLY B . n A 1 194 LEU 194 173 173 LEU LEU B . n A 1 195 TYR 195 174 174 TYR TYR B . n A 1 196 SER 196 175 175 SER SER B . n A 1 197 LEU 197 176 176 LEU LEU B . n A 1 198 SER 198 177 177 SER SER B . n A 1 199 SER 199 178 178 SER SER B . n A 1 200 VAL 200 179 179 VAL VAL B . n A 1 201 VAL 201 180 180 VAL VAL B . n A 1 202 THR 202 181 181 THR THR B . n A 1 203 VAL 203 182 182 VAL VAL B . n A 1 204 PRO 204 183 183 PRO PRO B . n A 1 205 SER 205 184 184 SER SER B . n A 1 206 SER 206 185 185 SER SER B . n A 1 207 SER 207 186 186 SER SER B . n A 1 208 LEU 208 187 187 LEU LEU B . n A 1 209 GLY 209 188 188 GLY GLY B . n A 1 210 THR 210 189 189 THR THR B . n A 1 211 GLN 211 190 190 GLN GLN B . n A 1 212 THR 212 191 191 THR THR B . n A 1 213 TYR 213 192 192 TYR TYR B . n A 1 214 ILE 214 193 193 ILE ILE B . n A 1 215 CYS 215 194 194 CYS CYS B . n A 1 216 ASN 216 195 195 ASN ASN B . n A 1 217 VAL 217 196 196 VAL VAL B . n A 1 218 ASN 218 197 197 ASN ASN B . n A 1 219 HIS 219 198 198 HIS HIS B . n A 1 220 LYS 220 199 199 LYS LYS B . n A 1 221 PRO 221 200 200 PRO PRO B . n A 1 222 SER 222 201 201 SER SER B . n A 1 223 ASN 223 202 202 ASN ASN B . n A 1 224 THR 224 203 203 THR THR B . n A 1 225 LYS 225 204 204 LYS LYS B . n A 1 226 VAL 226 205 205 VAL VAL B . n A 1 227 ASP 227 206 206 ASP ASP B . n A 1 228 LYS 228 207 207 LYS LYS B . n A 1 229 ARG 229 208 208 ARG ARG B . n A 1 230 VAL 230 209 209 VAL VAL B . n A 1 231 GLU 231 210 210 GLU GLU B . n A 1 232 PRO 232 211 211 PRO PRO B . n A 1 233 LYS 233 212 ? ? ? B . n A 1 234 SER 234 213 ? ? ? B . n A 1 235 CYS 235 214 ? ? ? B . n B 2 1 SER 1 8 ? ? ? A . n B 2 2 ASP 2 9 9 ASP ASP A . n B 2 3 ILE 3 11 11 ILE ILE A . n B 2 4 SER 4 12 12 SER SER A . n B 2 5 VAL 5 13 13 VAL VAL A . n B 2 6 ALA 6 14 14 ALA ALA A . n B 2 7 PRO 7 15 15 PRO PRO A . n B 2 8 GLY 8 16 16 GLY GLY A . n B 2 9 GLU 9 17 17 GLU GLU A . n B 2 10 THR 10 18 18 THR THR A . n B 2 11 ALA 11 19 19 ALA ALA A . n B 2 12 ARG 12 20 20 ARG ARG A . n B 2 13 ILE 13 21 21 ILE ILE A . n B 2 14 SER 14 22 22 SER SER A . n B 2 15 CYS 15 23 23 CYS CYS A . n B 2 16 GLY 16 24 24 GLY GLY A . n B 2 17 GLU 17 25 25 GLU GLU A . n B 2 18 LYS 18 26 26 LYS LYS A . n B 2 19 SER 19 27 27 SER SER A . n B 2 20 LEU 20 28 28 LEU LEU A . n B 2 21 GLY 21 29 29 GLY GLY A . n B 2 22 SER 22 30 30 SER SER A . n B 2 23 ARG 23 31 31 ARG ARG A . n B 2 24 ALA 24 32 32 ALA ALA A . n B 2 25 VAL 25 33 33 VAL VAL A . n B 2 26 GLN 26 34 34 GLN GLN A . n B 2 27 TRP 27 35 35 TRP TRP A . n B 2 28 TYR 28 36 36 TYR TYR A . n B 2 29 GLN 29 37 37 GLN GLN A . n B 2 30 HIS 30 38 38 HIS HIS A . n B 2 31 ARG 31 39 39 ARG ARG A . n B 2 32 ALA 32 40 40 ALA ALA A . n B 2 33 GLY 33 41 41 GLY GLY A . n B 2 34 GLN 34 42 42 GLN GLN A . n B 2 35 ALA 35 43 43 ALA ALA A . n B 2 36 PRO 36 44 44 PRO PRO A . n B 2 37 SER 37 45 45 SER SER A . n B 2 38 LEU 38 46 46 LEU LEU A . n B 2 39 ILE 39 47 47 ILE ILE A . n B 2 40 ILE 40 48 48 ILE ILE A . n B 2 41 TYR 41 49 49 TYR TYR A . n B 2 42 ASN 42 50 50 ASN ASN A . n B 2 43 ASN 43 51 51 ASN ASN A . n B 2 44 GLN 44 52 52 GLN GLN A . n B 2 45 ASP 45 53 53 ASP ASP A . n B 2 46 ARG 46 54 54 ARG ARG A . n B 2 47 PRO 47 55 55 PRO PRO A . n B 2 48 SER 48 56 56 SER SER A . n B 2 49 GLY 49 57 57 GLY GLY A . n B 2 50 ILE 50 58 58 ILE ILE A . n B 2 51 PRO 51 59 59 PRO PRO A . n B 2 52 GLU 52 60 60 GLU GLU A . n B 2 53 ARG 53 61 61 ARG ARG A . n B 2 54 PHE 54 62 62 PHE PHE A . n B 2 55 SER 55 63 63 SER SER A . n B 2 56 GLY 56 64 64 GLY GLY A . n B 2 57 SER 57 65 65 SER SER A . n B 2 58 PRO 58 66 66 PRO PRO A . n B 2 59 ASP 59 67 67 ASP ASP A . n B 2 60 SER 60 67 67 SER SER A A n B 2 61 PRO 61 67 67 PRO PRO A B n B 2 62 PHE 62 67 67 PHE PHE A C n B 2 63 GLY 63 68 68 GLY GLY A . n B 2 64 THR 64 69 69 THR THR A . n B 2 65 THR 65 70 70 THR THR A . n B 2 66 ALA 66 71 71 ALA ALA A . n B 2 67 THR 67 72 72 THR THR A . n B 2 68 LEU 68 73 73 LEU LEU A . n B 2 69 THR 69 74 74 THR THR A . n B 2 70 ILE 70 75 75 ILE ILE A . n B 2 71 THR 71 76 76 THR THR A . n B 2 72 SER 72 77 77 SER SER A . n B 2 73 VAL 73 78 78 VAL VAL A . n B 2 74 GLU 74 79 79 GLU GLU A . n B 2 75 ALA 75 80 80 ALA ALA A . n B 2 76 GLY 76 81 81 GLY GLY A . n B 2 77 ASP 77 82 82 ASP ASP A . n B 2 78 GLU 78 83 83 GLU GLU A . n B 2 79 ALA 79 84 84 ALA ALA A . n B 2 80 ASP 80 85 85 ASP ASP A . n B 2 81 TYR 81 86 86 TYR TYR A . n B 2 82 TYR 82 87 87 TYR TYR A . n B 2 83 CYS 83 88 88 CYS CYS A . n B 2 84 HIS 84 89 89 HIS HIS A . n B 2 85 ILE 85 90 90 ILE ILE A . n B 2 86 TRP 86 91 91 TRP TRP A . n B 2 87 ASP 87 92 92 ASP ASP A . n B 2 88 SER 88 93 93 SER SER A . n B 2 89 ARG 89 94 94 ARG ARG A . n B 2 90 VAL 90 95 95 VAL VAL A . n B 2 91 PRO 91 95 95 PRO PRO A A n B 2 92 THR 92 95 95 THR THR A B n B 2 93 LYS 93 95 95 LYS LYS A C n B 2 94 TRP 94 96 96 TRP TRP A . n B 2 95 VAL 95 97 97 VAL VAL A . n B 2 96 PHE 96 98 98 PHE PHE A . n B 2 97 GLY 97 99 99 GLY GLY A . n B 2 98 GLY 98 100 100 GLY GLY A . n B 2 99 GLY 99 101 101 GLY GLY A . n B 2 100 THR 100 102 102 THR THR A . n B 2 101 THR 101 103 103 THR THR A . n B 2 102 LEU 102 104 104 LEU LEU A . n B 2 103 THR 103 105 105 THR THR A . n B 2 104 VAL 104 106 106 VAL VAL A . n B 2 105 LEU 105 107 107 LEU LEU A . n B 2 106 GLY 106 108 108 GLY GLY A . n B 2 107 GLN 107 109 109 GLN GLN A . n B 2 108 PRO 108 110 110 PRO PRO A . n B 2 109 LYS 109 111 111 LYS LYS A . n B 2 110 ALA 110 112 112 ALA ALA A . n B 2 111 ALA 111 113 113 ALA ALA A . n B 2 112 PRO 112 114 114 PRO PRO A . n B 2 113 SER 113 115 115 SER SER A . n B 2 114 VAL 114 116 116 VAL VAL A . n B 2 115 THR 115 117 117 THR THR A . n B 2 116 LEU 116 118 118 LEU LEU A . n B 2 117 PHE 117 119 119 PHE PHE A . n B 2 118 PRO 118 120 120 PRO PRO A . n B 2 119 PRO 119 121 121 PRO PRO A . n B 2 120 SER 120 122 122 SER SER A . n B 2 121 SER 121 123 123 SER SER A . n B 2 122 GLU 122 124 124 GLU GLU A . n B 2 123 GLU 123 125 125 GLU GLU A . n B 2 124 LEU 124 126 126 LEU LEU A . n B 2 125 GLN 125 127 127 GLN GLN A . n B 2 126 ALA 126 128 128 ALA ALA A . n B 2 127 ASN 127 129 129 ASN ASN A . n B 2 128 LYS 128 130 130 LYS LYS A . n B 2 129 ALA 129 131 131 ALA ALA A . n B 2 130 THR 130 132 132 THR THR A . n B 2 131 LEU 131 133 133 LEU LEU A . n B 2 132 VAL 132 134 134 VAL VAL A . n B 2 133 CYS 133 135 135 CYS CYS A . n B 2 134 LEU 134 136 136 LEU LEU A . n B 2 135 ILE 135 137 137 ILE ILE A . n B 2 136 SER 136 138 138 SER SER A . n B 2 137 ASP 137 139 139 ASP ASP A . n B 2 138 PHE 138 140 140 PHE PHE A . n B 2 139 TYR 139 141 141 TYR TYR A . n B 2 140 PRO 140 142 142 PRO PRO A . n B 2 141 GLY 141 143 143 GLY GLY A . n B 2 142 ALA 142 144 144 ALA ALA A . n B 2 143 VAL 143 145 145 VAL VAL A . n B 2 144 THR 144 146 146 THR THR A . n B 2 145 VAL 145 147 147 VAL VAL A . n B 2 146 ALA 146 148 148 ALA ALA A . n B 2 147 TRP 147 149 149 TRP TRP A . n B 2 148 LYS 148 150 150 LYS LYS A . n B 2 149 ALA 149 151 151 ALA ALA A . n B 2 150 ASP 150 152 152 ASP ASP A . n B 2 151 SER 151 153 153 SER SER A . n B 2 152 SER 152 154 154 SER SER A . n B 2 153 PRO 153 155 155 PRO PRO A . n B 2 154 VAL 154 156 156 VAL VAL A . n B 2 155 LYS 155 157 157 LYS LYS A . n B 2 156 ALA 156 158 158 ALA ALA A . n B 2 157 GLY 157 159 159 GLY GLY A . n B 2 158 VAL 158 160 160 VAL VAL A . n B 2 159 GLU 159 161 161 GLU GLU A . n B 2 160 THR 160 162 162 THR THR A . n B 2 161 THR 161 163 163 THR THR A . n B 2 162 THR 162 164 164 THR THR A . n B 2 163 PRO 163 165 165 PRO PRO A . n B 2 164 SER 164 166 166 SER SER A . n B 2 165 LYS 165 167 167 LYS LYS A . n B 2 166 GLN 166 168 168 GLN GLN A . n B 2 167 SER 167 169 169 SER SER A . n B 2 168 ASN 168 170 170 ASN ASN A . n B 2 169 ASN 169 171 171 ASN ASN A . n B 2 170 LYS 170 172 172 LYS LYS A . n B 2 171 TYR 171 173 173 TYR TYR A . n B 2 172 ALA 172 174 174 ALA ALA A . n B 2 173 ALA 173 175 175 ALA ALA A . n B 2 174 SER 174 176 176 SER SER A . n B 2 175 SER 175 177 177 SER SER A . n B 2 176 TYR 176 178 178 TYR TYR A . n B 2 177 LEU 177 179 179 LEU LEU A . n B 2 178 SER 178 180 180 SER SER A . n B 2 179 LEU 179 181 181 LEU LEU A . n B 2 180 THR 180 182 182 THR THR A . n B 2 181 PRO 181 183 183 PRO PRO A . n B 2 182 GLU 182 184 184 GLU GLU A . n B 2 183 GLN 183 185 185 GLN GLN A . n B 2 184 TRP 184 186 186 TRP TRP A . n B 2 185 LYS 185 187 187 LYS LYS A . n B 2 186 SER 186 188 188 SER SER A . n B 2 187 HIS 187 189 189 HIS HIS A . n B 2 188 LYS 188 190 190 LYS LYS A . n B 2 189 SER 189 191 191 SER SER A . n B 2 190 TYR 190 192 192 TYR TYR A . n B 2 191 SER 191 193 193 SER SER A . n B 2 192 CYS 192 194 194 CYS CYS A . n B 2 193 GLN 193 195 195 GLN GLN A . n B 2 194 VAL 194 196 196 VAL VAL A . n B 2 195 THR 195 197 197 THR THR A . n B 2 196 HIS 196 198 198 HIS HIS A . n B 2 197 GLU 197 199 199 GLU GLU A . n B 2 198 GLY 198 200 200 GLY GLY A . n B 2 199 SER 199 201 201 SER SER A . n B 2 200 THR 200 202 202 THR THR A . n B 2 201 VAL 201 203 203 VAL VAL A . n B 2 202 GLU 202 204 204 GLU GLU A . n B 2 203 LYS 203 205 205 LYS LYS A . n B 2 204 THR 204 206 206 THR THR A . n B 2 205 VAL 205 207 207 VAL VAL A . n B 2 206 ALA 206 208 208 ALA ALA A . n B 2 207 PRO 207 209 209 PRO PRO A . n B 2 208 THR 208 210 210 THR THR A . n B 2 209 GLU 209 211 211 GLU GLU A . n B 2 210 CYS 210 212 ? ? ? A . n B 2 211 SER 211 213 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 GOL 1 301 301 GOL GOL B . E 4 GOL 1 301 301 GOL GOL A . F 4 GOL 1 302 302 GOL GOL A . G 5 HOH 1 401 401 HOH HOH B . G 5 HOH 2 402 404 HOH HOH B . G 5 HOH 3 403 405 HOH HOH B . G 5 HOH 4 404 406 HOH HOH B . G 5 HOH 5 405 407 HOH HOH B . G 5 HOH 6 406 408 HOH HOH B . H 5 HOH 1 401 401 HOH HOH A . H 5 HOH 2 402 402 HOH HOH A . H 5 HOH 3 403 403 HOH HOH A . H 5 HOH 4 404 404 HOH HOH A . H 5 HOH 5 405 405 HOH HOH A . H 5 HOH 6 406 402 HOH HOH A . H 5 HOH 7 407 403 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id ASN _pdbx_struct_mod_residue.label_seq_id 124 _pdbx_struct_mod_residue.auth_asym_id B _pdbx_struct_mod_residue.auth_comp_id ASN _pdbx_struct_mod_residue.auth_seq_id 103 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id ASN _pdbx_struct_mod_residue.details 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6320 ? 1 MORE 0 ? 1 'SSA (A^2)' 20670 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-05-15 2 'Structure model' 1 1 2014-02-05 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2023-09-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Atomic model' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Structure summary' 7 4 'Structure model' 'Data collection' 8 4 'Structure model' 'Database references' 9 4 'Structure model' 'Refinement description' 10 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' atom_site 2 3 'Structure model' chem_comp 3 3 'Structure model' entity 4 3 'Structure model' pdbx_branch_scheme 5 3 'Structure model' pdbx_chem_comp_identifier 6 3 'Structure model' pdbx_entity_branch 7 3 'Structure model' pdbx_entity_branch_descriptor 8 3 'Structure model' pdbx_entity_branch_link 9 3 'Structure model' pdbx_entity_branch_list 10 3 'Structure model' pdbx_entity_nonpoly 11 3 'Structure model' pdbx_nonpoly_scheme 12 3 'Structure model' pdbx_struct_assembly_gen 13 3 'Structure model' pdbx_validate_close_contact 14 3 'Structure model' struct_asym 15 3 'Structure model' struct_conn 16 3 'Structure model' struct_site 17 3 'Structure model' struct_site_gen 18 4 'Structure model' chem_comp 19 4 'Structure model' chem_comp_atom 20 4 'Structure model' chem_comp_bond 21 4 'Structure model' database_2 22 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.B_iso_or_equiv' 2 3 'Structure model' '_atom_site.Cartn_x' 3 3 'Structure model' '_atom_site.Cartn_y' 4 3 'Structure model' '_atom_site.Cartn_z' 5 3 'Structure model' '_atom_site.auth_asym_id' 6 3 'Structure model' '_atom_site.auth_atom_id' 7 3 'Structure model' '_atom_site.auth_comp_id' 8 3 'Structure model' '_atom_site.auth_seq_id' 9 3 'Structure model' '_atom_site.label_asym_id' 10 3 'Structure model' '_atom_site.label_atom_id' 11 3 'Structure model' '_atom_site.label_comp_id' 12 3 'Structure model' '_atom_site.label_entity_id' 13 3 'Structure model' '_atom_site.type_symbol' 14 3 'Structure model' '_chem_comp.name' 15 3 'Structure model' '_chem_comp.type' 16 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 17 3 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_1' 18 3 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_2' 19 3 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_1' 20 3 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2' 21 3 'Structure model' '_struct_conn.pdbx_dist_value' 22 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 23 3 'Structure model' '_struct_conn.pdbx_role' 24 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 25 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 26 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 27 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 28 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 29 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 30 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 31 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 32 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 33 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 34 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 35 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 36 4 'Structure model' '_chem_comp.pdbx_synonyms' 37 4 'Structure model' '_database_2.pdbx_DOI' 38 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 22.4673 27.0570 30.9696 0.5174 0.6081 0.5925 0.0849 -0.0175 0.0225 -0.0718 -0.0405 0.3322 -0.1952 0.2492 -0.1111 0.0625 0.2470 0.1505 -0.3364 -0.0347 -0.0090 -0.1235 0.5454 0.0000 'X-RAY DIFFRACTION' 2 ? refined 15.9122 24.9088 39.5005 0.4520 0.3284 0.3387 0.0682 -0.1287 -0.0291 1.1238 0.4456 1.1404 -0.3258 -1.2313 -0.4499 -0.0405 0.2010 0.0648 0.2834 0.0028 -0.0902 0.1903 0.2317 0.0000 'X-RAY DIFFRACTION' 3 ? refined 13.6153 25.7388 24.1858 0.2262 0.3347 0.2518 -0.0051 -0.0239 -0.0463 -0.0196 0.2942 -0.0375 0.0703 0.1465 -0.2105 -0.0030 0.0345 0.0658 0.0511 0.2133 -0.1883 -0.1186 0.4437 0.0000 'X-RAY DIFFRACTION' 4 ? refined 6.5299 22.5636 1.1652 0.1795 0.2647 0.2861 -0.0028 -0.0069 -0.0185 0.3328 -0.1790 0.3426 -0.5244 -0.1608 -0.0969 -0.0397 -0.1547 -0.0589 -0.1499 0.1434 0.0195 -0.0849 -0.0342 0.0000 'X-RAY DIFFRACTION' 5 ? refined 6.9307 24.9027 3.9451 0.2766 0.4158 0.3833 0.0688 -0.0555 -0.0585 1.1643 0.3705 0.5874 1.2517 0.1025 0.5336 -0.0913 -0.2313 0.2600 0.0842 -0.0927 0.0415 -0.1054 0.0493 0.0000 'X-RAY DIFFRACTION' 6 ? refined 14.0102 26.4714 -2.3132 0.2735 0.4128 0.3868 -0.0305 0.0062 -0.0058 0.0780 -0.0605 0.1292 0.0274 -0.0820 -0.2286 -0.0209 0.2004 0.3137 0.2143 0.0252 0.0432 0.0334 0.0339 -0.0000 'X-RAY DIFFRACTION' 7 ? refined -7.1076 19.7711 36.2569 0.4368 0.2259 0.3137 -0.0097 0.0362 -0.0167 0.7828 0.6269 0.7377 -0.0643 -0.2948 0.4861 0.0649 0.2056 0.0178 0.2443 -0.0503 0.2614 0.2155 0.0199 -0.0000 'X-RAY DIFFRACTION' 8 ? refined 0.0606 29.2974 34.2099 0.5263 0.2660 0.3384 -0.1467 0.0117 0.0749 0.0566 0.2378 0.0443 0.1448 0.0502 0.2359 -0.9796 -0.1347 0.7467 -0.2520 0.8183 -0.1325 -0.0153 0.0657 0.0000 'X-RAY DIFFRACTION' 9 ? refined -2.3259 28.2502 43.3963 0.4623 0.1689 0.2819 0.0094 0.0025 -0.0109 1.1311 0.3916 0.8409 0.1851 -0.4170 0.2887 0.0125 -0.0468 -0.0169 0.2946 -0.0442 0.1671 0.1037 -0.1522 -0.0000 'X-RAY DIFFRACTION' 10 ? refined -8.5714 20.9467 18.9714 0.3965 0.3331 0.3920 0.0202 -0.1046 -0.0159 0.2877 0.2422 0.1148 0.3872 -0.1966 0.0710 -0.0761 0.2872 -0.1035 0.0792 -0.1493 0.2209 0.0406 0.0119 -0.0000 'X-RAY DIFFRACTION' 11 ? refined 1.3549 11.0943 2.1968 0.2394 0.3916 0.3273 0.0274 0.0288 0.0310 1.8860 0.4958 0.4416 0.5735 0.3222 0.2201 -0.0996 -0.1509 -0.1484 0.0049 0.0724 -0.1767 0.0004 0.0162 -0.0000 'X-RAY DIFFRACTION' 12 ? refined -6.2000 8.2031 -2.6826 0.2412 0.5165 0.4466 -0.0262 -0.0281 -0.0449 0.1046 0.5609 0.0590 0.0635 0.1066 0.0326 0.0313 0.4560 -0.6904 0.0358 -0.1564 0.0176 0.0845 -0.5245 0.0000 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 9:26) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 27:92) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 93:119) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 120:151) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 152:188) ; 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 189:211) ; 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resseq 1:39) ; 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resseq 40:51) ; 'X-RAY DIFFRACTION' 9 9 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resseq 52:101) ; 'X-RAY DIFFRACTION' 10 10 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resseq 102:117) ; 'X-RAY DIFFRACTION' 11 11 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resseq 118:201) ; 'X-RAY DIFFRACTION' 12 12 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resseq 202:211) ; # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal Blu-Ice 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.7.2_869)' ? 3 XDS 'data reduction' . ? 4 XDS 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O6 C GAL 6 ? ? O6 C SIA 7 ? ? 2.02 2 1 ND2 B ASN 103 ? ? C2 C NAG 1 ? ? 2.17 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 ALA _pdbx_validate_rmsd_angle.auth_seq_id_1 123 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 124 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CA _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 124 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 128.78 _pdbx_validate_rmsd_angle.angle_target_value 119.30 _pdbx_validate_rmsd_angle.angle_deviation 9.48 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.50 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER B 15 ? ? 84.56 -19.02 2 1 PHE B 100 G ? -69.64 12.11 3 1 PRO B 124 ? ? -37.71 136.02 4 1 PHE B 144 ? ? -172.55 140.11 5 1 LEU A 28 ? ? -103.88 -65.96 6 1 ASN A 51 ? ? 67.56 -50.55 7 1 LEU A 107 ? ? -68.93 74.85 8 1 ASP A 152 ? ? 48.24 -109.52 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B LYS 212 ? A LYS 233 2 1 Y 1 B SER 213 ? A SER 234 3 1 Y 1 B CYS 214 ? A CYS 235 4 1 Y 1 A SER 8 ? B SER 1 5 1 Y 1 A CYS 212 ? B CYS 210 6 1 Y 1 A SER 213 ? B SER 211 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BMA C1 C N R 74 BMA C2 C N S 75 BMA C3 C N S 76 BMA C4 C N S 77 BMA C5 C N R 78 BMA C6 C N N 79 BMA O1 O N N 80 BMA O2 O N N 81 BMA O3 O N N 82 BMA O4 O N N 83 BMA O5 O N N 84 BMA O6 O N N 85 BMA H1 H N N 86 BMA H2 H N N 87 BMA H3 H N N 88 BMA H4 H N N 89 BMA H5 H N N 90 BMA H61 H N N 91 BMA H62 H N N 92 BMA HO1 H N N 93 BMA HO2 H N N 94 BMA HO3 H N N 95 BMA HO4 H N N 96 BMA HO6 H N N 97 CYS N N N N 98 CYS CA C N R 99 CYS C C N N 100 CYS O O N N 101 CYS CB C N N 102 CYS SG S N N 103 CYS OXT O N N 104 CYS H H N N 105 CYS H2 H N N 106 CYS HA H N N 107 CYS HB2 H N N 108 CYS HB3 H N N 109 CYS HG H N N 110 CYS HXT H N N 111 FUC C1 C N R 112 FUC C2 C N S 113 FUC C3 C N R 114 FUC C4 C N S 115 FUC C5 C N S 116 FUC C6 C N N 117 FUC O1 O N N 118 FUC O2 O N N 119 FUC O3 O N N 120 FUC O4 O N N 121 FUC O5 O N N 122 FUC H1 H N N 123 FUC H2 H N N 124 FUC H3 H N N 125 FUC H4 H N N 126 FUC H5 H N N 127 FUC H61 H N N 128 FUC H62 H N N 129 FUC H63 H N N 130 FUC HO1 H N N 131 FUC HO2 H N N 132 FUC HO3 H N N 133 FUC HO4 H N N 134 GAL C1 C N R 135 GAL C2 C N R 136 GAL C3 C N S 137 GAL C4 C N R 138 GAL C5 C N R 139 GAL C6 C N N 140 GAL O1 O N N 141 GAL O2 O N N 142 GAL O3 O N N 143 GAL O4 O N N 144 GAL O5 O N N 145 GAL O6 O N N 146 GAL H1 H N N 147 GAL H2 H N N 148 GAL H3 H N N 149 GAL H4 H N N 150 GAL H5 H N N 151 GAL H61 H N N 152 GAL H62 H N N 153 GAL HO1 H N N 154 GAL HO2 H N N 155 GAL HO3 H N N 156 GAL HO4 H N N 157 GAL HO6 H N N 158 GLN N N N N 159 GLN CA C N S 160 GLN C C N N 161 GLN O O N N 162 GLN CB C N N 163 GLN CG C N N 164 GLN CD C N N 165 GLN OE1 O N N 166 GLN NE2 N N N 167 GLN OXT O N N 168 GLN H H N N 169 GLN H2 H N N 170 GLN HA H N N 171 GLN HB2 H N N 172 GLN HB3 H N N 173 GLN HG2 H N N 174 GLN HG3 H N N 175 GLN HE21 H N N 176 GLN HE22 H N N 177 GLN HXT H N N 178 GLU N N N N 179 GLU CA C N S 180 GLU C C N N 181 GLU O O N N 182 GLU CB C N N 183 GLU CG C N N 184 GLU CD C N N 185 GLU OE1 O N N 186 GLU OE2 O N N 187 GLU OXT O N N 188 GLU H H N N 189 GLU H2 H N N 190 GLU HA H N N 191 GLU HB2 H N N 192 GLU HB3 H N N 193 GLU HG2 H N N 194 GLU HG3 H N N 195 GLU HE2 H N N 196 GLU HXT H N N 197 GLY N N N N 198 GLY CA C N N 199 GLY C C N N 200 GLY O O N N 201 GLY OXT O N N 202 GLY H H N N 203 GLY H2 H N N 204 GLY HA2 H N N 205 GLY HA3 H N N 206 GLY HXT H N N 207 GOL C1 C N N 208 GOL O1 O N N 209 GOL C2 C N N 210 GOL O2 O N N 211 GOL C3 C N N 212 GOL O3 O N N 213 GOL H11 H N N 214 GOL H12 H N N 215 GOL HO1 H N N 216 GOL H2 H N N 217 GOL HO2 H N N 218 GOL H31 H N N 219 GOL H32 H N N 220 GOL HO3 H N N 221 HIS N N N N 222 HIS CA C N S 223 HIS C C N N 224 HIS O O N N 225 HIS CB C N N 226 HIS CG C Y N 227 HIS ND1 N Y N 228 HIS CD2 C Y N 229 HIS CE1 C Y N 230 HIS NE2 N Y N 231 HIS OXT O N N 232 HIS H H N N 233 HIS H2 H N N 234 HIS HA H N N 235 HIS HB2 H N N 236 HIS HB3 H N N 237 HIS HD1 H N N 238 HIS HD2 H N N 239 HIS HE1 H N N 240 HIS HE2 H N N 241 HIS HXT H N N 242 HOH O O N N 243 HOH H1 H N N 244 HOH H2 H N N 245 ILE N N N N 246 ILE CA C N S 247 ILE C C N N 248 ILE O O N N 249 ILE CB C N S 250 ILE CG1 C N N 251 ILE CG2 C N N 252 ILE CD1 C N N 253 ILE OXT O N N 254 ILE H H N N 255 ILE H2 H N N 256 ILE HA H N N 257 ILE HB H N N 258 ILE HG12 H N N 259 ILE HG13 H N N 260 ILE HG21 H N N 261 ILE HG22 H N N 262 ILE HG23 H N N 263 ILE HD11 H N N 264 ILE HD12 H N N 265 ILE HD13 H N N 266 ILE HXT H N N 267 LEU N N N N 268 LEU CA C N S 269 LEU C C N N 270 LEU O O N N 271 LEU CB C N N 272 LEU CG C N N 273 LEU CD1 C N N 274 LEU CD2 C N N 275 LEU OXT O N N 276 LEU H H N N 277 LEU H2 H N N 278 LEU HA H N N 279 LEU HB2 H N N 280 LEU HB3 H N N 281 LEU HG H N N 282 LEU HD11 H N N 283 LEU HD12 H N N 284 LEU HD13 H N N 285 LEU HD21 H N N 286 LEU HD22 H N N 287 LEU HD23 H N N 288 LEU HXT H N N 289 LYS N N N N 290 LYS CA C N S 291 LYS C C N N 292 LYS O O N N 293 LYS CB C N N 294 LYS CG C N N 295 LYS CD C N N 296 LYS CE C N N 297 LYS NZ N N N 298 LYS OXT O N N 299 LYS H H N N 300 LYS H2 H N N 301 LYS HA H N N 302 LYS HB2 H N N 303 LYS HB3 H N N 304 LYS HG2 H N N 305 LYS HG3 H N N 306 LYS HD2 H N N 307 LYS HD3 H N N 308 LYS HE2 H N N 309 LYS HE3 H N N 310 LYS HZ1 H N N 311 LYS HZ2 H N N 312 LYS HZ3 H N N 313 LYS HXT H N N 314 MAN C1 C N S 315 MAN C2 C N S 316 MAN C3 C N S 317 MAN C4 C N S 318 MAN C5 C N R 319 MAN C6 C N N 320 MAN O1 O N N 321 MAN O2 O N N 322 MAN O3 O N N 323 MAN O4 O N N 324 MAN O5 O N N 325 MAN O6 O N N 326 MAN H1 H N N 327 MAN H2 H N N 328 MAN H3 H N N 329 MAN H4 H N N 330 MAN H5 H N N 331 MAN H61 H N N 332 MAN H62 H N N 333 MAN HO1 H N N 334 MAN HO2 H N N 335 MAN HO3 H N N 336 MAN HO4 H N N 337 MAN HO6 H N N 338 MET N N N N 339 MET CA C N S 340 MET C C N N 341 MET O O N N 342 MET CB C N N 343 MET CG C N N 344 MET SD S N N 345 MET CE C N N 346 MET OXT O N N 347 MET H H N N 348 MET H2 H N N 349 MET HA H N N 350 MET HB2 H N N 351 MET HB3 H N N 352 MET HG2 H N N 353 MET HG3 H N N 354 MET HE1 H N N 355 MET HE2 H N N 356 MET HE3 H N N 357 MET HXT H N N 358 NAG C1 C N R 359 NAG C2 C N R 360 NAG C3 C N R 361 NAG C4 C N S 362 NAG C5 C N R 363 NAG C6 C N N 364 NAG C7 C N N 365 NAG C8 C N N 366 NAG N2 N N N 367 NAG O1 O N N 368 NAG O3 O N N 369 NAG O4 O N N 370 NAG O5 O N N 371 NAG O6 O N N 372 NAG O7 O N N 373 NAG H1 H N N 374 NAG H2 H N N 375 NAG H3 H N N 376 NAG H4 H N N 377 NAG H5 H N N 378 NAG H61 H N N 379 NAG H62 H N N 380 NAG H81 H N N 381 NAG H82 H N N 382 NAG H83 H N N 383 NAG HN2 H N N 384 NAG HO1 H N N 385 NAG HO3 H N N 386 NAG HO4 H N N 387 NAG HO6 H N N 388 PHE N N N N 389 PHE CA C N S 390 PHE C C N N 391 PHE O O N N 392 PHE CB C N N 393 PHE CG C Y N 394 PHE CD1 C Y N 395 PHE CD2 C Y N 396 PHE CE1 C Y N 397 PHE CE2 C Y N 398 PHE CZ C Y N 399 PHE OXT O N N 400 PHE H H N N 401 PHE H2 H N N 402 PHE HA H N N 403 PHE HB2 H N N 404 PHE HB3 H N N 405 PHE HD1 H N N 406 PHE HD2 H N N 407 PHE HE1 H N N 408 PHE HE2 H N N 409 PHE HZ H N N 410 PHE HXT H N N 411 PRO N N N N 412 PRO CA C N S 413 PRO C C N N 414 PRO O O N N 415 PRO CB C N N 416 PRO CG C N N 417 PRO CD C N N 418 PRO OXT O N N 419 PRO H H N N 420 PRO HA H N N 421 PRO HB2 H N N 422 PRO HB3 H N N 423 PRO HG2 H N N 424 PRO HG3 H N N 425 PRO HD2 H N N 426 PRO HD3 H N N 427 PRO HXT H N N 428 SER N N N N 429 SER CA C N S 430 SER C C N N 431 SER O O N N 432 SER CB C N N 433 SER OG O N N 434 SER OXT O N N 435 SER H H N N 436 SER H2 H N N 437 SER HA H N N 438 SER HB2 H N N 439 SER HB3 H N N 440 SER HG H N N 441 SER HXT H N N 442 SIA C1 C N N 443 SIA C2 C N R 444 SIA C3 C N N 445 SIA C4 C N S 446 SIA C5 C N R 447 SIA C6 C N R 448 SIA C7 C N R 449 SIA C8 C N R 450 SIA C9 C N N 451 SIA C10 C N N 452 SIA C11 C N N 453 SIA N5 N N N 454 SIA O1A O N N 455 SIA O1B O N N 456 SIA O2 O N N 457 SIA O4 O N N 458 SIA O6 O N N 459 SIA O7 O N N 460 SIA O8 O N N 461 SIA O9 O N N 462 SIA O10 O N N 463 SIA H32 H N N 464 SIA H31 H N N 465 SIA H4 H N N 466 SIA H5 H N N 467 SIA H6 H N N 468 SIA H7 H N N 469 SIA H8 H N N 470 SIA H92 H N N 471 SIA H91 H N N 472 SIA H111 H N N 473 SIA H113 H N N 474 SIA H112 H N N 475 SIA HN5 H N N 476 SIA HO1B H N N 477 SIA HO2 H N N 478 SIA HO4 H N N 479 SIA HO7 H N N 480 SIA HO8 H N N 481 SIA HO9 H N N 482 THR N N N N 483 THR CA C N S 484 THR C C N N 485 THR O O N N 486 THR CB C N R 487 THR OG1 O N N 488 THR CG2 C N N 489 THR OXT O N N 490 THR H H N N 491 THR H2 H N N 492 THR HA H N N 493 THR HB H N N 494 THR HG1 H N N 495 THR HG21 H N N 496 THR HG22 H N N 497 THR HG23 H N N 498 THR HXT H N N 499 TRP N N N N 500 TRP CA C N S 501 TRP C C N N 502 TRP O O N N 503 TRP CB C N N 504 TRP CG C Y N 505 TRP CD1 C Y N 506 TRP CD2 C Y N 507 TRP NE1 N Y N 508 TRP CE2 C Y N 509 TRP CE3 C Y N 510 TRP CZ2 C Y N 511 TRP CZ3 C Y N 512 TRP CH2 C Y N 513 TRP OXT O N N 514 TRP H H N N 515 TRP H2 H N N 516 TRP HA H N N 517 TRP HB2 H N N 518 TRP HB3 H N N 519 TRP HD1 H N N 520 TRP HE1 H N N 521 TRP HE3 H N N 522 TRP HZ2 H N N 523 TRP HZ3 H N N 524 TRP HH2 H N N 525 TRP HXT H N N 526 TYR N N N N 527 TYR CA C N S 528 TYR C C N N 529 TYR O O N N 530 TYR CB C N N 531 TYR CG C Y N 532 TYR CD1 C Y N 533 TYR CD2 C Y N 534 TYR CE1 C Y N 535 TYR CE2 C Y N 536 TYR CZ C Y N 537 TYR OH O N N 538 TYR OXT O N N 539 TYR H H N N 540 TYR H2 H N N 541 TYR HA H N N 542 TYR HB2 H N N 543 TYR HB3 H N N 544 TYR HD1 H N N 545 TYR HD2 H N N 546 TYR HE1 H N N 547 TYR HE2 H N N 548 TYR HH H N N 549 TYR HXT H N N 550 VAL N N N N 551 VAL CA C N S 552 VAL C C N N 553 VAL O O N N 554 VAL CB C N N 555 VAL CG1 C N N 556 VAL CG2 C N N 557 VAL OXT O N N 558 VAL H H N N 559 VAL H2 H N N 560 VAL HA H N N 561 VAL HB H N N 562 VAL HG11 H N N 563 VAL HG12 H N N 564 VAL HG13 H N N 565 VAL HG21 H N N 566 VAL HG22 H N N 567 VAL HG23 H N N 568 VAL HXT H N N 569 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BMA C1 C2 sing N N 70 BMA C1 O1 sing N N 71 BMA C1 O5 sing N N 72 BMA C1 H1 sing N N 73 BMA C2 C3 sing N N 74 BMA C2 O2 sing N N 75 BMA C2 H2 sing N N 76 BMA C3 C4 sing N N 77 BMA C3 O3 sing N N 78 BMA C3 H3 sing N N 79 BMA C4 C5 sing N N 80 BMA C4 O4 sing N N 81 BMA C4 H4 sing N N 82 BMA C5 C6 sing N N 83 BMA C5 O5 sing N N 84 BMA C5 H5 sing N N 85 BMA C6 O6 sing N N 86 BMA C6 H61 sing N N 87 BMA C6 H62 sing N N 88 BMA O1 HO1 sing N N 89 BMA O2 HO2 sing N N 90 BMA O3 HO3 sing N N 91 BMA O4 HO4 sing N N 92 BMA O6 HO6 sing N N 93 CYS N CA sing N N 94 CYS N H sing N N 95 CYS N H2 sing N N 96 CYS CA C sing N N 97 CYS CA CB sing N N 98 CYS CA HA sing N N 99 CYS C O doub N N 100 CYS C OXT sing N N 101 CYS CB SG sing N N 102 CYS CB HB2 sing N N 103 CYS CB HB3 sing N N 104 CYS SG HG sing N N 105 CYS OXT HXT sing N N 106 FUC C1 C2 sing N N 107 FUC C1 O1 sing N N 108 FUC C1 O5 sing N N 109 FUC C1 H1 sing N N 110 FUC C2 C3 sing N N 111 FUC C2 O2 sing N N 112 FUC C2 H2 sing N N 113 FUC C3 C4 sing N N 114 FUC C3 O3 sing N N 115 FUC C3 H3 sing N N 116 FUC C4 C5 sing N N 117 FUC C4 O4 sing N N 118 FUC C4 H4 sing N N 119 FUC C5 C6 sing N N 120 FUC C5 O5 sing N N 121 FUC C5 H5 sing N N 122 FUC C6 H61 sing N N 123 FUC C6 H62 sing N N 124 FUC C6 H63 sing N N 125 FUC O1 HO1 sing N N 126 FUC O2 HO2 sing N N 127 FUC O3 HO3 sing N N 128 FUC O4 HO4 sing N N 129 GAL C1 C2 sing N N 130 GAL C1 O1 sing N N 131 GAL C1 O5 sing N N 132 GAL C1 H1 sing N N 133 GAL C2 C3 sing N N 134 GAL C2 O2 sing N N 135 GAL C2 H2 sing N N 136 GAL C3 C4 sing N N 137 GAL C3 O3 sing N N 138 GAL C3 H3 sing N N 139 GAL C4 C5 sing N N 140 GAL C4 O4 sing N N 141 GAL C4 H4 sing N N 142 GAL C5 C6 sing N N 143 GAL C5 O5 sing N N 144 GAL C5 H5 sing N N 145 GAL C6 O6 sing N N 146 GAL C6 H61 sing N N 147 GAL C6 H62 sing N N 148 GAL O1 HO1 sing N N 149 GAL O2 HO2 sing N N 150 GAL O3 HO3 sing N N 151 GAL O4 HO4 sing N N 152 GAL O6 HO6 sing N N 153 GLN N CA sing N N 154 GLN N H sing N N 155 GLN N H2 sing N N 156 GLN CA C sing N N 157 GLN CA CB sing N N 158 GLN CA HA sing N N 159 GLN C O doub N N 160 GLN C OXT sing N N 161 GLN CB CG sing N N 162 GLN CB HB2 sing N N 163 GLN CB HB3 sing N N 164 GLN CG CD sing N N 165 GLN CG HG2 sing N N 166 GLN CG HG3 sing N N 167 GLN CD OE1 doub N N 168 GLN CD NE2 sing N N 169 GLN NE2 HE21 sing N N 170 GLN NE2 HE22 sing N N 171 GLN OXT HXT sing N N 172 GLU N CA sing N N 173 GLU N H sing N N 174 GLU N H2 sing N N 175 GLU CA C sing N N 176 GLU CA CB sing N N 177 GLU CA HA sing N N 178 GLU C O doub N N 179 GLU C OXT sing N N 180 GLU CB CG sing N N 181 GLU CB HB2 sing N N 182 GLU CB HB3 sing N N 183 GLU CG CD sing N N 184 GLU CG HG2 sing N N 185 GLU CG HG3 sing N N 186 GLU CD OE1 doub N N 187 GLU CD OE2 sing N N 188 GLU OE2 HE2 sing N N 189 GLU OXT HXT sing N N 190 GLY N CA sing N N 191 GLY N H sing N N 192 GLY N H2 sing N N 193 GLY CA C sing N N 194 GLY CA HA2 sing N N 195 GLY CA HA3 sing N N 196 GLY C O doub N N 197 GLY C OXT sing N N 198 GLY OXT HXT sing N N 199 GOL C1 O1 sing N N 200 GOL C1 C2 sing N N 201 GOL C1 H11 sing N N 202 GOL C1 H12 sing N N 203 GOL O1 HO1 sing N N 204 GOL C2 O2 sing N N 205 GOL C2 C3 sing N N 206 GOL C2 H2 sing N N 207 GOL O2 HO2 sing N N 208 GOL C3 O3 sing N N 209 GOL C3 H31 sing N N 210 GOL C3 H32 sing N N 211 GOL O3 HO3 sing N N 212 HIS N CA sing N N 213 HIS N H sing N N 214 HIS N H2 sing N N 215 HIS CA C sing N N 216 HIS CA CB sing N N 217 HIS CA HA sing N N 218 HIS C O doub N N 219 HIS C OXT sing N N 220 HIS CB CG sing N N 221 HIS CB HB2 sing N N 222 HIS CB HB3 sing N N 223 HIS CG ND1 sing Y N 224 HIS CG CD2 doub Y N 225 HIS ND1 CE1 doub Y N 226 HIS ND1 HD1 sing N N 227 HIS CD2 NE2 sing Y N 228 HIS CD2 HD2 sing N N 229 HIS CE1 NE2 sing Y N 230 HIS CE1 HE1 sing N N 231 HIS NE2 HE2 sing N N 232 HIS OXT HXT sing N N 233 HOH O H1 sing N N 234 HOH O H2 sing N N 235 ILE N CA sing N N 236 ILE N H sing N N 237 ILE N H2 sing N N 238 ILE CA C sing N N 239 ILE CA CB sing N N 240 ILE CA HA sing N N 241 ILE C O doub N N 242 ILE C OXT sing N N 243 ILE CB CG1 sing N N 244 ILE CB CG2 sing N N 245 ILE CB HB sing N N 246 ILE CG1 CD1 sing N N 247 ILE CG1 HG12 sing N N 248 ILE CG1 HG13 sing N N 249 ILE CG2 HG21 sing N N 250 ILE CG2 HG22 sing N N 251 ILE CG2 HG23 sing N N 252 ILE CD1 HD11 sing N N 253 ILE CD1 HD12 sing N N 254 ILE CD1 HD13 sing N N 255 ILE OXT HXT sing N N 256 LEU N CA sing N N 257 LEU N H sing N N 258 LEU N H2 sing N N 259 LEU CA C sing N N 260 LEU CA CB sing N N 261 LEU CA HA sing N N 262 LEU C O doub N N 263 LEU C OXT sing N N 264 LEU CB CG sing N N 265 LEU CB HB2 sing N N 266 LEU CB HB3 sing N N 267 LEU CG CD1 sing N N 268 LEU CG CD2 sing N N 269 LEU CG HG sing N N 270 LEU CD1 HD11 sing N N 271 LEU CD1 HD12 sing N N 272 LEU CD1 HD13 sing N N 273 LEU CD2 HD21 sing N N 274 LEU CD2 HD22 sing N N 275 LEU CD2 HD23 sing N N 276 LEU OXT HXT sing N N 277 LYS N CA sing N N 278 LYS N H sing N N 279 LYS N H2 sing N N 280 LYS CA C sing N N 281 LYS CA CB sing N N 282 LYS CA HA sing N N 283 LYS C O doub N N 284 LYS C OXT sing N N 285 LYS CB CG sing N N 286 LYS CB HB2 sing N N 287 LYS CB HB3 sing N N 288 LYS CG CD sing N N 289 LYS CG HG2 sing N N 290 LYS CG HG3 sing N N 291 LYS CD CE sing N N 292 LYS CD HD2 sing N N 293 LYS CD HD3 sing N N 294 LYS CE NZ sing N N 295 LYS CE HE2 sing N N 296 LYS CE HE3 sing N N 297 LYS NZ HZ1 sing N N 298 LYS NZ HZ2 sing N N 299 LYS NZ HZ3 sing N N 300 LYS OXT HXT sing N N 301 MAN C1 C2 sing N N 302 MAN C1 O1 sing N N 303 MAN C1 O5 sing N N 304 MAN C1 H1 sing N N 305 MAN C2 C3 sing N N 306 MAN C2 O2 sing N N 307 MAN C2 H2 sing N N 308 MAN C3 C4 sing N N 309 MAN C3 O3 sing N N 310 MAN C3 H3 sing N N 311 MAN C4 C5 sing N N 312 MAN C4 O4 sing N N 313 MAN C4 H4 sing N N 314 MAN C5 C6 sing N N 315 MAN C5 O5 sing N N 316 MAN C5 H5 sing N N 317 MAN C6 O6 sing N N 318 MAN C6 H61 sing N N 319 MAN C6 H62 sing N N 320 MAN O1 HO1 sing N N 321 MAN O2 HO2 sing N N 322 MAN O3 HO3 sing N N 323 MAN O4 HO4 sing N N 324 MAN O6 HO6 sing N N 325 MET N CA sing N N 326 MET N H sing N N 327 MET N H2 sing N N 328 MET CA C sing N N 329 MET CA CB sing N N 330 MET CA HA sing N N 331 MET C O doub N N 332 MET C OXT sing N N 333 MET CB CG sing N N 334 MET CB HB2 sing N N 335 MET CB HB3 sing N N 336 MET CG SD sing N N 337 MET CG HG2 sing N N 338 MET CG HG3 sing N N 339 MET SD CE sing N N 340 MET CE HE1 sing N N 341 MET CE HE2 sing N N 342 MET CE HE3 sing N N 343 MET OXT HXT sing N N 344 NAG C1 C2 sing N N 345 NAG C1 O1 sing N N 346 NAG C1 O5 sing N N 347 NAG C1 H1 sing N N 348 NAG C2 C3 sing N N 349 NAG C2 N2 sing N N 350 NAG C2 H2 sing N N 351 NAG C3 C4 sing N N 352 NAG C3 O3 sing N N 353 NAG C3 H3 sing N N 354 NAG C4 C5 sing N N 355 NAG C4 O4 sing N N 356 NAG C4 H4 sing N N 357 NAG C5 C6 sing N N 358 NAG C5 O5 sing N N 359 NAG C5 H5 sing N N 360 NAG C6 O6 sing N N 361 NAG C6 H61 sing N N 362 NAG C6 H62 sing N N 363 NAG C7 C8 sing N N 364 NAG C7 N2 sing N N 365 NAG C7 O7 doub N N 366 NAG C8 H81 sing N N 367 NAG C8 H82 sing N N 368 NAG C8 H83 sing N N 369 NAG N2 HN2 sing N N 370 NAG O1 HO1 sing N N 371 NAG O3 HO3 sing N N 372 NAG O4 HO4 sing N N 373 NAG O6 HO6 sing N N 374 PHE N CA sing N N 375 PHE N H sing N N 376 PHE N H2 sing N N 377 PHE CA C sing N N 378 PHE CA CB sing N N 379 PHE CA HA sing N N 380 PHE C O doub N N 381 PHE C OXT sing N N 382 PHE CB CG sing N N 383 PHE CB HB2 sing N N 384 PHE CB HB3 sing N N 385 PHE CG CD1 doub Y N 386 PHE CG CD2 sing Y N 387 PHE CD1 CE1 sing Y N 388 PHE CD1 HD1 sing N N 389 PHE CD2 CE2 doub Y N 390 PHE CD2 HD2 sing N N 391 PHE CE1 CZ doub Y N 392 PHE CE1 HE1 sing N N 393 PHE CE2 CZ sing Y N 394 PHE CE2 HE2 sing N N 395 PHE CZ HZ sing N N 396 PHE OXT HXT sing N N 397 PRO N CA sing N N 398 PRO N CD sing N N 399 PRO N H sing N N 400 PRO CA C sing N N 401 PRO CA CB sing N N 402 PRO CA HA sing N N 403 PRO C O doub N N 404 PRO C OXT sing N N 405 PRO CB CG sing N N 406 PRO CB HB2 sing N N 407 PRO CB HB3 sing N N 408 PRO CG CD sing N N 409 PRO CG HG2 sing N N 410 PRO CG HG3 sing N N 411 PRO CD HD2 sing N N 412 PRO CD HD3 sing N N 413 PRO OXT HXT sing N N 414 SER N CA sing N N 415 SER N H sing N N 416 SER N H2 sing N N 417 SER CA C sing N N 418 SER CA CB sing N N 419 SER CA HA sing N N 420 SER C O doub N N 421 SER C OXT sing N N 422 SER CB OG sing N N 423 SER CB HB2 sing N N 424 SER CB HB3 sing N N 425 SER OG HG sing N N 426 SER OXT HXT sing N N 427 SIA C1 C2 sing N N 428 SIA C1 O1A doub N N 429 SIA C1 O1B sing N N 430 SIA C2 C3 sing N N 431 SIA C2 O2 sing N N 432 SIA C2 O6 sing N N 433 SIA C3 C4 sing N N 434 SIA C3 H32 sing N N 435 SIA C3 H31 sing N N 436 SIA C4 C5 sing N N 437 SIA C4 O4 sing N N 438 SIA C4 H4 sing N N 439 SIA C5 C6 sing N N 440 SIA C5 N5 sing N N 441 SIA C5 H5 sing N N 442 SIA C6 C7 sing N N 443 SIA C6 O6 sing N N 444 SIA C6 H6 sing N N 445 SIA C7 C8 sing N N 446 SIA C7 O7 sing N N 447 SIA C7 H7 sing N N 448 SIA C8 C9 sing N N 449 SIA C8 O8 sing N N 450 SIA C8 H8 sing N N 451 SIA C9 O9 sing N N 452 SIA C9 H92 sing N N 453 SIA C9 H91 sing N N 454 SIA C10 C11 sing N N 455 SIA C10 N5 sing N N 456 SIA C10 O10 doub N N 457 SIA C11 H111 sing N N 458 SIA C11 H113 sing N N 459 SIA C11 H112 sing N N 460 SIA N5 HN5 sing N N 461 SIA O1B HO1B sing N N 462 SIA O2 HO2 sing N N 463 SIA O4 HO4 sing N N 464 SIA O7 HO7 sing N N 465 SIA O8 HO8 sing N N 466 SIA O9 HO9 sing N N 467 THR N CA sing N N 468 THR N H sing N N 469 THR N H2 sing N N 470 THR CA C sing N N 471 THR CA CB sing N N 472 THR CA HA sing N N 473 THR C O doub N N 474 THR C OXT sing N N 475 THR CB OG1 sing N N 476 THR CB CG2 sing N N 477 THR CB HB sing N N 478 THR OG1 HG1 sing N N 479 THR CG2 HG21 sing N N 480 THR CG2 HG22 sing N N 481 THR CG2 HG23 sing N N 482 THR OXT HXT sing N N 483 TRP N CA sing N N 484 TRP N H sing N N 485 TRP N H2 sing N N 486 TRP CA C sing N N 487 TRP CA CB sing N N 488 TRP CA HA sing N N 489 TRP C O doub N N 490 TRP C OXT sing N N 491 TRP CB CG sing N N 492 TRP CB HB2 sing N N 493 TRP CB HB3 sing N N 494 TRP CG CD1 doub Y N 495 TRP CG CD2 sing Y N 496 TRP CD1 NE1 sing Y N 497 TRP CD1 HD1 sing N N 498 TRP CD2 CE2 doub Y N 499 TRP CD2 CE3 sing Y N 500 TRP NE1 CE2 sing Y N 501 TRP NE1 HE1 sing N N 502 TRP CE2 CZ2 sing Y N 503 TRP CE3 CZ3 doub Y N 504 TRP CE3 HE3 sing N N 505 TRP CZ2 CH2 doub Y N 506 TRP CZ2 HZ2 sing N N 507 TRP CZ3 CH2 sing Y N 508 TRP CZ3 HZ3 sing N N 509 TRP CH2 HH2 sing N N 510 TRP OXT HXT sing N N 511 TYR N CA sing N N 512 TYR N H sing N N 513 TYR N H2 sing N N 514 TYR CA C sing N N 515 TYR CA CB sing N N 516 TYR CA HA sing N N 517 TYR C O doub N N 518 TYR C OXT sing N N 519 TYR CB CG sing N N 520 TYR CB HB2 sing N N 521 TYR CB HB3 sing N N 522 TYR CG CD1 doub Y N 523 TYR CG CD2 sing Y N 524 TYR CD1 CE1 sing Y N 525 TYR CD1 HD1 sing N N 526 TYR CD2 CE2 doub Y N 527 TYR CD2 HD2 sing N N 528 TYR CE1 CZ doub Y N 529 TYR CE1 HE1 sing N N 530 TYR CE2 CZ sing Y N 531 TYR CE2 HE2 sing N N 532 TYR CZ OH sing N N 533 TYR OH HH sing N N 534 TYR OXT HXT sing N N 535 VAL N CA sing N N 536 VAL N H sing N N 537 VAL N H2 sing N N 538 VAL CA C sing N N 539 VAL CA CB sing N N 540 VAL CA HA sing N N 541 VAL C O doub N N 542 VAL C OXT sing N N 543 VAL CB CG1 sing N N 544 VAL CB CG2 sing N N 545 VAL CB HB sing N N 546 VAL CG1 HG11 sing N N 547 VAL CG1 HG12 sing N N 548 VAL CG1 HG13 sing N N 549 VAL CG2 HG21 sing N N 550 VAL CG2 HG22 sing N N 551 VAL CG2 HG23 sing N N 552 VAL OXT HXT sing N N 553 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 3 NAG 1 C NAG 1 B NAG 302 n C 3 NAG 2 C NAG 2 B NAG 303 n C 3 BMA 3 C BMA 3 B BMA 304 n C 3 MAN 4 C MAN 4 B MAN 305 n C 3 NAG 5 C NAG 5 B NAG 306 n C 3 GAL 6 C GAL 6 B GAL 307 n C 3 SIA 7 C SIA 7 B SIA 308 n C 3 MAN 8 C MAN 8 B MAN 309 n C 3 FUC 9 C FUC 9 B FUC 310 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc SIA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DNeup5Aca SIA 'COMMON NAME' GMML 1.0 'N-acetyl-a-D-neuraminic acid' SIA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Neup5Ac SIA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Neu5Ac # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 'DNeup5Aca2-6DGalpb1-4DGlcpNAcb1-2DManpa1-3[DManpa1-6]DManpb1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 2 3 ;WURCS=2.0/6,9,8/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O][a1221m-1a_1-5]/1-1-2-3-1-4-5-3-6/a4-b1_a6-i1_b4-c1_c3-d1_c6-h1_d2-e1_e4-f1_f6-g2 ; WURCS PDB2Glycan 1.1.0 3 3 ;[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{[(2+1)][b-D-GlcpNAc]{[(4+1)][b-D-Galp]{[(6+2)][a-D-Neup5Ac]{}}}}[(6+1)][a-D-Manp]{}}}[(6+1)][a-L-Fucp]{}}} ; LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 3 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 3 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 3 4 MAN C1 O1 3 BMA O3 HO3 sing ? 4 3 5 NAG C1 O1 4 MAN O2 HO2 sing ? 5 3 6 GAL C1 O1 5 NAG O4 HO4 sing ? 6 3 7 SIA C2 O2 6 GAL O6 HO6 sing ? 7 3 8 MAN C1 O1 3 BMA O6 HO6 sing ? 8 3 9 FUC C1 O1 1 NAG O6 HO6 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 NAG 1 n 3 NAG 2 n 3 BMA 3 n 3 MAN 4 n 3 NAG 5 n 3 GAL 6 n 3 SIA 7 n 3 MAN 8 n 3 FUC 9 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 GLYCEROL GOL 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4JY6 _pdbx_initial_refinement_model.details 'PDB ENTRY 4JY6' #