HEADER SIGNALING PROTEIN/TRANSFERASE 04-APR-13 4K0V TITLE STRUCTURAL BASIS FOR ANGIOPOIETIN-1 MEDIATED SIGNALING INITIATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: TEK TYROSINE KINASE VARIANT; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ANGIOPOIETIN-1; COMPND 7 CHAIN: B; COMPND 8 SYNONYM: ANG-1; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 7 EXPRESSION_SYSTEM_CELL_LINE: HEK 293; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: ANGPT1, KIAA0003; SOURCE 13 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 15 EXPRESSION_SYSTEM_CELL_LINE: HEK 293 KEYWDS CELLULAR SIGNALING, TIE RECEPTOR TYROSINE KINASE, SIGNALING PROTEIN- KEYWDS 2 TRANSFERASE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR X.YU,T.C.M.SEEGAR,A.C.DALTON,D.TZVETKOVA-ROBEV,Y.GOLDGUR,D.B.NIKOLOV, AUTHOR 2 W.A.BARTON REVDAT 3 20-SEP-23 4K0V 1 SEQADV REVDAT 2 15-MAY-13 4K0V 1 JRNL REVDAT 1 08-MAY-13 4K0V 0 JRNL AUTH X.YU,T.C.SEEGAR,A.C.DALTON,D.TZVETKOVA-ROBEV,Y.GOLDGUR, JRNL AUTH 2 K.R.RAJASHANKAR,D.B.NIKOLOV,W.A.BARTON JRNL TITL STRUCTURAL BASIS FOR ANGIOPOIETIN-1-MEDIATED SIGNALING JRNL TITL 2 INITIATION. JRNL REF PROC.NATL.ACAD.SCI.USA V. 110 7205 2013 JRNL REFN ISSN 0027-8424 JRNL PMID 23592718 JRNL DOI 10.1073/PNAS.1216890110 REMARK 2 REMARK 2 RESOLUTION. 4.51 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.51 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.01 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.1 REMARK 3 NUMBER OF REFLECTIONS : 17061 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.250 REMARK 3 R VALUE (WORKING SET) : 0.248 REMARK 3 FREE R VALUE : 0.288 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.030 REMARK 3 FREE R VALUE TEST SET COUNT : 517 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.0123 - 7.1322 0.98 4497 140 0.2367 0.2581 REMARK 3 2 7.1322 - 5.6736 0.95 4222 130 0.2910 0.3654 REMARK 3 3 5.6736 - 4.9601 0.92 4041 123 0.2372 0.2755 REMARK 3 4 4.9601 - 4.5100 0.87 3784 124 0.2441 0.3035 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.530 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 18.65280 REMARK 3 B22 (A**2) : 18.65280 REMARK 3 B33 (A**2) : -37.30550 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 5949 REMARK 3 ANGLE : 1.625 8033 REMARK 3 CHIRALITY : 0.109 833 REMARK 3 PLANARITY : 0.008 1054 REMARK 3 DIHEDRAL : 18.633 2189 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4K0V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-APR-13. REMARK 100 THE DEPOSITION ID IS D_1000078749. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-FEB-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18062 REMARK 200 RESOLUTION RANGE HIGH (A) : 4.510 REMARK 200 RESOLUTION RANGE LOW (A) : 30.012 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.14000 REMARK 200 FOR THE DATA SET : 17.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 2GY7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6 M NAH2PO4, 0.4 M K2HPO4, 0.1 M REMARK 280 PHOSPHATE-CITRATE, PH 4.2, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 94.76650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 94.76650 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 167.43350 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 94.76650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 83.71675 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 94.76650 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 251.15025 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 94.76650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 251.15025 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 94.76650 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 83.71675 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 94.76650 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 94.76650 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 167.43350 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 94.76650 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 94.76650 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 167.43350 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 94.76650 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 251.15025 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 94.76650 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 83.71675 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 94.76650 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 83.71675 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 94.76650 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 251.15025 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 94.76650 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 94.76650 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 167.43350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 537 REMARK 465 THR A 538 REMARK 465 ALA A 539 REMARK 465 SER A 540 REMARK 465 ILE A 541 REMARK 465 GLY A 542 REMARK 465 GLY A 543 REMARK 465 SER A 544 REMARK 465 ALA A 545 REMARK 465 SER A 546 REMARK 465 GLY A 547 REMARK 465 LEU A 548 REMARK 465 VAL A 549 REMARK 465 PRO A 550 REMARK 465 ARG A 551 REMARK 465 ALA B -4 REMARK 465 GLU B -3 REMARK 465 LEU B -2 REMARK 465 ALA B -1 REMARK 465 SER B 0 REMARK 465 GLU B 1 REMARK 465 LYS B 2 REMARK 465 GLY B 220 REMARK 465 SER B 221 REMARK 465 LEU B 222 REMARK 465 VAL B 223 REMARK 465 PRO B 224 REMARK 465 ARG B 225 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 276 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CB CYS A 302 SG CYS A 311 2.02 REMARK 500 NH2 ARG A 59 O LYS A 95 2.18 REMARK 500 ND2 ASN B 71 OG SER B 73 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 126 C - N - CA ANGL. DEV. = 9.4 DEGREES REMARK 500 PRO A 368 C - N - CA ANGL. DEV. = 12.6 DEGREES REMARK 500 PRO B 31 C - N - CA ANGL. DEV. = 11.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 24 125.56 176.81 REMARK 500 LEU A 32 115.19 62.17 REMARK 500 SER A 36 -142.24 -108.39 REMARK 500 ARG A 50 88.79 51.32 REMARK 500 PRO A 51 -121.89 -97.36 REMARK 500 HIS A 52 83.00 -151.89 REMARK 500 GLU A 53 122.45 -36.84 REMARK 500 GLU A 81 -76.66 -58.56 REMARK 500 GLU A 91 -34.74 75.51 REMARK 500 ALA A 93 70.58 -63.48 REMARK 500 SER A 94 -95.57 -102.03 REMARK 500 ARG A 105 175.69 65.28 REMARK 500 VAL A 106 -140.78 -163.38 REMARK 500 ALA A 110 -155.81 -92.59 REMARK 500 ILE A 111 122.45 166.92 REMARK 500 THR A 115 -167.19 -129.41 REMARK 500 GLN A 121 -90.92 -56.04 REMARK 500 ALA A 122 -141.53 53.33 REMARK 500 PRO A 126 -11.25 -44.80 REMARK 500 ALA A 127 8.80 51.96 REMARK 500 THR A 128 131.38 172.86 REMARK 500 LYS A 135 115.08 -35.96 REMARK 500 ASN A 140 72.08 -115.90 REMARK 500 VAL A 146 -70.84 -107.21 REMARK 500 GLU A 150 35.04 -90.19 REMARK 500 GLU A 151 -166.58 -118.04 REMARK 500 ASN A 158 20.41 48.91 REMARK 500 ILE A 162 -103.61 -122.85 REMARK 500 SER A 164 -160.85 -162.27 REMARK 500 GLU A 169 59.73 -98.65 REMARK 500 PRO A 171 174.19 -57.41 REMARK 500 ALA A 191 113.88 -168.55 REMARK 500 ILE A 194 -68.56 10.63 REMARK 500 SER A 201 -177.29 -68.70 REMARK 500 GLU A 219 -9.24 -148.39 REMARK 500 CYS A 220 30.51 85.84 REMARK 500 MET A 228 -164.67 -78.80 REMARK 500 PRO A 244 108.01 -49.86 REMARK 500 CYS A 251 19.55 56.52 REMARK 500 LYS A 275 27.49 -65.61 REMARK 500 SER A 276 21.40 -177.48 REMARK 500 PRO A 282 138.21 -34.36 REMARK 500 PRO A 284 -3.75 -58.99 REMARK 500 CYS A 298 18.27 58.25 REMARK 500 TYR A 307 -26.59 -145.33 REMARK 500 LYS A 312 24.71 -70.82 REMARK 500 SER A 316 40.84 -104.48 REMARK 500 ARG A 325 -19.21 -47.26 REMARK 500 LEU A 330 70.73 -105.29 REMARK 500 ARG A 342 139.73 177.97 REMARK 500 REMARK 500 THIS ENTRY HAS 104 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 467 GLU A 468 149.37 REMARK 500 REMARK 500 REMARK: NULL DBREF 4K0V A 23 542 UNP Q59HG2 Q59HG2_HUMAN 56 575 DBREF 4K0V B 1 219 UNP Q15389 ANGP1_HUMAN 280 498 SEQADV 4K0V GLY A 543 UNP Q59HG2 EXPRESSION TAG SEQADV 4K0V SER A 544 UNP Q59HG2 EXPRESSION TAG SEQADV 4K0V ALA A 545 UNP Q59HG2 EXPRESSION TAG SEQADV 4K0V SER A 546 UNP Q59HG2 EXPRESSION TAG SEQADV 4K0V GLY A 547 UNP Q59HG2 EXPRESSION TAG SEQADV 4K0V LEU A 548 UNP Q59HG2 EXPRESSION TAG SEQADV 4K0V VAL A 549 UNP Q59HG2 EXPRESSION TAG SEQADV 4K0V PRO A 550 UNP Q59HG2 EXPRESSION TAG SEQADV 4K0V ARG A 551 UNP Q59HG2 EXPRESSION TAG SEQADV 4K0V ALA B -4 UNP Q15389 EXPRESSION TAG SEQADV 4K0V GLU B -3 UNP Q15389 EXPRESSION TAG SEQADV 4K0V LEU B -2 UNP Q15389 EXPRESSION TAG SEQADV 4K0V ALA B -1 UNP Q15389 EXPRESSION TAG SEQADV 4K0V SER B 0 UNP Q15389 EXPRESSION TAG SEQADV 4K0V GLY B 220 UNP Q15389 EXPRESSION TAG SEQADV 4K0V SER B 221 UNP Q15389 EXPRESSION TAG SEQADV 4K0V LEU B 222 UNP Q15389 EXPRESSION TAG SEQADV 4K0V VAL B 223 UNP Q15389 EXPRESSION TAG SEQADV 4K0V PRO B 224 UNP Q15389 EXPRESSION TAG SEQADV 4K0V ARG B 225 UNP Q15389 EXPRESSION TAG SEQRES 1 A 529 ALA MET ASP LEU ILE LEU ILE ASN SER LEU PRO LEU VAL SEQRES 2 A 529 SER ASP ALA GLU THR SER LEU THR CYS ILE ALA SER GLY SEQRES 3 A 529 TRP ARG PRO HIS GLU PRO ILE THR ILE GLY ARG ASP PHE SEQRES 4 A 529 GLU ALA LEU MET ASN GLN HIS GLN ASP PRO LEU GLU VAL SEQRES 5 A 529 THR GLN ASP VAL THR ARG GLU TRP ALA LYS LYS VAL VAL SEQRES 6 A 529 TRP LYS ARG GLU LYS ALA SER LYS ILE ASN GLY ALA TYR SEQRES 7 A 529 PHE CYS GLU GLY ARG VAL ARG GLY GLU ALA ILE ARG ILE SEQRES 8 A 529 ARG THR MET LYS MET ARG GLN GLN ALA SER PHE LEU PRO SEQRES 9 A 529 ALA THR LEU THR MET THR VAL ASP LYS GLY ASP ASN VAL SEQRES 10 A 529 ASN ILE SER PHE LYS LYS VAL LEU ILE LYS GLU GLU ASP SEQRES 11 A 529 ALA VAL ILE TYR LYS ASN GLY SER PHE ILE HIS SER VAL SEQRES 12 A 529 PRO ARG HIS GLU VAL PRO ASP ILE LEU GLU VAL HIS LEU SEQRES 13 A 529 PRO HIS ALA GLN PRO GLN ASP ALA GLY VAL TYR SER ALA SEQRES 14 A 529 ARG TYR ILE GLY GLY ASN LEU PHE THR SER ALA PHE THR SEQRES 15 A 529 ARG LEU ILE VAL ARG ARG CYS GLU ALA GLN LYS TRP GLY SEQRES 16 A 529 PRO GLU CYS ASN HIS LEU CYS THR ALA CYS MET ASN ASN SEQRES 17 A 529 GLY VAL CYS HIS GLU ASP THR GLY GLU CYS ILE CYS PRO SEQRES 18 A 529 PRO GLY PHE MET GLY ARG THR CYS GLU LYS ALA CYS GLU SEQRES 19 A 529 LEU HIS THR PHE GLY ARG THR CYS LYS GLU ARG CYS SER SEQRES 20 A 529 GLY GLN GLU GLY CYS LYS SER TYR VAL PHE CYS LEU PRO SEQRES 21 A 529 ASP PRO TYR GLY CYS SER CYS ALA THR GLY TRP LYS GLY SEQRES 22 A 529 LEU GLN CYS ASN GLU ALA CYS HIS PRO GLY PHE TYR GLY SEQRES 23 A 529 PRO ASP CYS LYS LEU ARG CYS SER CYS ASN ASN GLY GLU SEQRES 24 A 529 MET CYS ASP ARG PHE GLN GLY CYS LEU CYS SER PRO GLY SEQRES 25 A 529 TRP GLN GLY LEU GLN CYS GLU ARG GLU GLY ILE PRO ARG SEQRES 26 A 529 MET THR PRO LYS ILE VAL ASP LEU PRO ASP HIS ILE GLU SEQRES 27 A 529 VAL ASN SER GLY LYS PHE ASN PRO ILE CYS LYS ALA SER SEQRES 28 A 529 GLY TRP PRO LEU PRO THR ASN GLU GLU MET THR LEU VAL SEQRES 29 A 529 LYS PRO ASP GLY THR VAL LEU HIS PRO LYS ASP PHE ASN SEQRES 30 A 529 HIS THR ASP HIS PHE SER VAL ALA ILE PHE THR ILE HIS SEQRES 31 A 529 ARG ILE LEU PRO PRO ASP SER GLY VAL TRP VAL CYS SER SEQRES 32 A 529 VAL ASN THR VAL ALA GLY MET VAL GLU LYS PRO PHE ASN SEQRES 33 A 529 ILE SER VAL LYS VAL LEU PRO LYS PRO LEU ASN ALA PRO SEQRES 34 A 529 ASN VAL ILE ASP THR GLY HIS ASN PHE ALA VAL ILE ASN SEQRES 35 A 529 ILE SER SER GLU PRO TYR PHE GLY ASP GLY PRO ILE LYS SEQRES 36 A 529 SER LYS LYS LEU LEU TYR LYS PRO VAL ASN HIS TYR GLU SEQRES 37 A 529 ALA TRP GLN HIS ILE GLN VAL THR ASN GLU ILE VAL THR SEQRES 38 A 529 LEU ASN TYR LEU GLU PRO ARG THR GLU TYR GLU LEU CYS SEQRES 39 A 529 VAL GLN LEU VAL ARG ARG GLY GLU GLY GLY GLU GLY HIS SEQRES 40 A 529 PRO GLY PRO VAL ARG ARG PHE THR THR ALA SER ILE GLY SEQRES 41 A 529 GLY SER ALA SER GLY LEU VAL PRO ARG SEQRES 1 B 230 ALA GLU LEU ALA SER GLU LYS PRO PHE ARG ASP CYS ALA SEQRES 2 B 230 ASP VAL TYR GLN ALA GLY PHE ASN LYS SER GLY ILE TYR SEQRES 3 B 230 THR ILE TYR ILE ASN ASN MET PRO GLU PRO LYS LYS VAL SEQRES 4 B 230 PHE CYS ASN MET ASP VAL ASN GLY GLY GLY TRP THR VAL SEQRES 5 B 230 ILE GLN HIS ARG GLU ASP GLY SER LEU ASP PHE GLN ARG SEQRES 6 B 230 GLY TRP LYS GLU TYR LYS MET GLY PHE GLY ASN PRO SER SEQRES 7 B 230 GLY GLU TYR TRP LEU GLY ASN GLU PHE ILE PHE ALA ILE SEQRES 8 B 230 THR SER GLN ARG GLN TYR MET LEU ARG ILE GLU LEU MET SEQRES 9 B 230 ASP TRP GLU GLY ASN ARG ALA TYR SER GLN TYR ASP ARG SEQRES 10 B 230 PHE HIS ILE GLY ASN GLU LYS GLN ASN TYR ARG LEU TYR SEQRES 11 B 230 LEU LYS GLY HIS THR GLY THR ALA GLY LYS GLN SER SER SEQRES 12 B 230 LEU ILE LEU HIS GLY ALA ASP PHE SER THR LYS ASP ALA SEQRES 13 B 230 ASP ASN ASP ASN CYS MET CYS LYS CYS ALA LEU MET LEU SEQRES 14 B 230 THR GLY GLY TRP TRP PHE ASP ALA CYS GLY PRO SER ASN SEQRES 15 B 230 LEU ASN GLY MET PHE TYR THR ALA GLY GLN ASN HIS GLY SEQRES 16 B 230 LYS LEU ASN GLY ILE LYS TRP HIS TYR PHE LYS GLY PRO SEQRES 17 B 230 SER TYR SER LEU ARG SER THR THR MET MET ILE ARG PRO SEQRES 18 B 230 LEU ASP PHE GLY SER LEU VAL PRO ARG HELIX 1 1 GLY A 308 LYS A 312 5 5 HELIX 2 2 THR A 379 GLU A 381 5 3 HELIX 3 3 LEU A 415 SER A 419 5 5 HELIX 4 4 ASP B 6 ALA B 13 1 8 HELIX 5 5 GLY B 61 GLY B 68 1 8 HELIX 6 6 GLY B 79 THR B 87 1 9 HELIX 7 7 CYS B 160 THR B 165 1 6 HELIX 8 8 HIS B 198 GLY B 202 1 5 SHEET 1 A 6 THR A 75 ASP A 77 0 SHEET 2 A 6 TRP A 82 TRP A 88 -1 O ALA A 83 N ASP A 77 SHEET 3 A 6 THR A 40 SER A 47 -1 N CYS A 44 O LYS A 84 SHEET 4 A 6 ASP A 25 SER A 31 -1 N ILE A 29 O THR A 43 SHEET 5 A 6 VAL A 278 LEU A 281 -1 O VAL A 278 N ASN A 30 SHEET 6 A 6 GLY A 286 CYS A 289 -1 O SER A 288 N PHE A 279 SHEET 1 B 4 LEU A 34 VAL A 35 0 SHEET 2 B 4 ARG A 112 ARG A 119 1 O MET A 118 N VAL A 35 SHEET 3 B 4 GLY A 98 GLU A 103 -1 N TYR A 100 O THR A 115 SHEET 4 B 4 THR A 56 ARG A 59 -1 N GLY A 58 O PHE A 101 SHEET 1 C 2 PHE A 124 LEU A 125 0 SHEET 2 C 2 LYS A 144 LYS A 145 -1 O LYS A 144 N LEU A 125 SHEET 1 D 5 THR A 130 ASP A 134 0 SHEET 2 D 5 THR A 204 ARG A 209 1 O ILE A 207 N VAL A 133 SHEET 3 D 5 GLY A 187 ARG A 192 -1 N TYR A 189 O THR A 204 SHEET 4 D 5 ALA A 153 LYS A 157 -1 N TYR A 156 O SER A 190 SHEET 5 D 5 SER A 160 VAL A 165 -1 O SER A 160 N LYS A 157 SHEET 1 E 2 VAL A 139 ASN A 140 0 SHEET 2 E 2 HIS A 177 LEU A 178 -1 O LEU A 178 N VAL A 139 SHEET 1 F 2 LYS A 215 TRP A 216 0 SHEET 2 F 2 HIS A 222 LEU A 223 -1 O HIS A 222 N TRP A 216 SHEET 1 G 2 VAL A 232 CYS A 233 0 SHEET 2 G 2 CYS A 240 ILE A 241 -1 O ILE A 241 N VAL A 232 SHEET 1 H 2 PHE A 246 MET A 247 0 SHEET 2 H 2 LYS A 253 ALA A 254 -1 O LYS A 253 N MET A 247 SHEET 1 I 2 THR A 259 PHE A 260 0 SHEET 2 I 2 GLU A 266 ARG A 267 -1 O GLU A 266 N PHE A 260 SHEET 1 J 2 CYS A 323 ASP A 324 0 SHEET 2 J 2 GLY A 328 CYS A 329 -1 O GLY A 328 N ASP A 324 SHEET 1 K 3 ILE A 369 ALA A 372 0 SHEET 2 K 3 SER A 405 ILE A 408 -1 O ALA A 407 N CYS A 370 SHEET 3 K 3 ASP A 397 ASN A 399 -1 N ASN A 399 O VAL A 406 SHEET 1 L 4 VAL A 392 LEU A 393 0 SHEET 2 L 4 MET A 383 VAL A 386 -1 N LEU A 385 O LEU A 393 SHEET 3 L 4 GLY A 420 THR A 428 -1 O SER A 425 N THR A 384 SHEET 4 L 4 GLY A 431 ILE A 439 -1 O VAL A 433 N VAL A 426 SHEET 1 M 3 ASN A 452 ASP A 455 0 SHEET 2 M 3 VAL A 462 ASN A 464 -1 O ASN A 464 N ASN A 452 SHEET 3 M 3 ASN A 499 ILE A 501 -1 O GLU A 500 N ILE A 463 SHEET 1 N 3 LYS A 480 LYS A 484 0 SHEET 2 N 3 THR A 511 CYS A 516 -1 O GLU A 512 N LYS A 484 SHEET 3 N 3 VAL A 533 ARG A 534 -1 O ARG A 534 N THR A 511 SHEET 1 O 5 GLY B 19 ILE B 23 0 SHEET 2 O 5 LYS B 32 ASN B 37 -1 O VAL B 34 N TYR B 21 SHEET 3 O 5 TRP B 45 HIS B 50 -1 O TRP B 45 N ASN B 37 SHEET 4 O 5 TYR B 76 TRP B 77 -1 O TYR B 76 N HIS B 50 SHEET 5 O 5 PHE B 69 GLY B 70 -1 N PHE B 69 O TRP B 77 SHEET 1 P 7 GLY B 19 ILE B 23 0 SHEET 2 P 7 LYS B 32 ASN B 37 -1 O VAL B 34 N TYR B 21 SHEET 3 P 7 TRP B 45 HIS B 50 -1 O TRP B 45 N ASN B 37 SHEET 4 P 7 THR B 211 PRO B 216 -1 O ILE B 214 N THR B 46 SHEET 5 P 7 TYR B 92 MET B 99 -1 N GLU B 97 O THR B 211 SHEET 6 P 7 ARG B 105 ILE B 115 -1 O TYR B 110 N LEU B 94 SHEET 7 P 7 LEU B 124 GLY B 131 -1 O THR B 130 N GLN B 109 SHEET 1 Q 2 PHE B 146 THR B 148 0 SHEET 2 Q 2 GLY B 167 TRP B 169 -1 O TRP B 168 N SER B 147 SHEET 1 R 2 SER B 176 ASN B 177 0 SHEET 2 R 2 LYS B 196 TRP B 197 -1 O LYS B 196 N ASN B 177 SSBOND 1 CYS A 44 CYS A 102 1555 1555 2.05 SSBOND 2 CYS A 211 CYS A 220 1555 1555 2.04 SSBOND 3 CYS A 224 CYS A 233 1555 1555 2.03 SSBOND 4 CYS A 227 CYS A 240 1555 1555 2.02 SSBOND 5 CYS A 242 CYS A 251 1555 1555 2.00 SSBOND 6 CYS A 255 CYS A 264 1555 1555 2.04 SSBOND 7 CYS A 268 CYS A 274 1555 1555 2.04 SSBOND 8 CYS A 280 CYS A 287 1555 1555 2.04 SSBOND 9 CYS A 289 CYS A 298 1555 1555 2.01 SSBOND 10 CYS A 302 CYS A 311 1555 1555 2.05 SSBOND 11 CYS A 315 CYS A 323 1555 1555 2.02 SSBOND 12 CYS A 317 CYS A 329 1555 1555 2.03 SSBOND 13 CYS A 331 CYS A 340 1555 1555 2.03 SSBOND 14 CYS A 370 CYS A 424 1555 1555 2.03 SSBOND 15 CYS B 7 CYS B 36 1555 1555 2.03 SSBOND 16 CYS B 156 CYS B 158 1555 1555 2.06 SSBOND 17 CYS B 160 CYS B 173 1555 1555 2.05 CISPEP 1 ARG A 50 PRO A 51 0 -3.17 CRYST1 189.533 189.533 334.867 90.00 90.00 90.00 I 41 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005276 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005276 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002986 0.00000