HEADER OXIDOREDUCTASE 16-APR-13 4K6X TITLE CRYSTAL STRUCTURE OF DISULFIDE OXIDOREDUCTASE FROM MYCOBACTERIUM TITLE 2 TUBERCULOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: DISULFIDE OXIDOREDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 52-261; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: RV2969C; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DSBA, DISULFIDE OXIDASE, VKOR, THIOREDOXIN FOLD, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR L.PREMKUMAR,J.L.MARTIN REVDAT 3 15-NOV-17 4K6X 1 REMARK REVDAT 2 27-NOV-13 4K6X 1 JRNL REVDAT 1 02-OCT-13 4K6X 0 JRNL AUTH L.PREMKUMAR,B.HERAS,W.DUPREZ,P.WALDEN,M.HALILI,F.KURTH, JRNL AUTH 2 D.P.FAIRLIE,J.L.MARTIN JRNL TITL RV2969C, ESSENTIAL FOR OPTIMAL GROWTH IN MYCOBACTERIUM JRNL TITL 2 TUBERCULOSIS, IS A DSBA-LIKE ENZYME THAT INTERACTS WITH JRNL TITL 3 VKOR-DERIVED PEPTIDES AND HAS ATYPICAL FEATURES OF DSBA-LIKE JRNL TITL 4 DISULFIDE OXIDASES. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 69 1981 2013 JRNL REFN ISSN 0907-4449 JRNL PMID 24100317 JRNL DOI 10.1107/S0907444913017800 REMARK 2 REMARK 2 RESOLUTION. 1.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 59.32 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 35176 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.148 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1763 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 59.3506 - 4.6351 0.95 2700 122 0.1713 0.1995 REMARK 3 2 4.6351 - 3.6792 0.97 2601 126 0.1172 0.1576 REMARK 3 3 3.6792 - 3.2141 0.98 2590 133 0.1299 0.1539 REMARK 3 4 3.2141 - 2.9203 0.98 2589 122 0.1521 0.2062 REMARK 3 5 2.9203 - 2.7110 0.98 2548 143 0.1600 0.2160 REMARK 3 6 2.7110 - 2.5511 0.99 2548 141 0.1536 0.2284 REMARK 3 7 2.5511 - 2.4234 0.99 2541 143 0.1411 0.2005 REMARK 3 8 2.4234 - 2.3179 0.99 2576 124 0.1390 0.1749 REMARK 3 9 2.3179 - 2.2286 0.99 2541 159 0.1432 0.1943 REMARK 3 10 2.2286 - 2.1517 0.99 2557 133 0.1476 0.2119 REMARK 3 11 2.1517 - 2.0844 0.99 2521 157 0.1601 0.2236 REMARK 3 12 2.0844 - 2.0249 0.99 2589 122 0.1828 0.2474 REMARK 3 13 2.0249 - 1.9716 0.99 2512 138 0.2128 0.2908 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.650 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 3086 REMARK 3 ANGLE : 1.300 4212 REMARK 3 CHIRALITY : 0.071 487 REMARK 3 PLANARITY : 0.007 556 REMARK 3 DIHEDRAL : 12.681 1117 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 57 THROUGH 255 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.2456 -29.1662 15.7714 REMARK 3 T TENSOR REMARK 3 T11: 0.0827 T22: 0.1928 REMARK 3 T33: 0.1431 T12: -0.0287 REMARK 3 T13: -0.0093 T23: -0.0250 REMARK 3 L TENSOR REMARK 3 L11: 0.4282 L22: 2.4619 REMARK 3 L33: 2.1489 L12: 0.0528 REMARK 3 L13: -0.1314 L23: -0.8133 REMARK 3 S TENSOR REMARK 3 S11: 0.0046 S12: -0.0103 S13: 0.0484 REMARK 3 S21: -0.0501 S22: 0.0638 S23: 0.1275 REMARK 3 S31: 0.0506 S32: -0.2485 S33: -0.0729 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 57 THROUGH 255 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.2328 -17.3278 13.5223 REMARK 3 T TENSOR REMARK 3 T11: 0.1149 T22: 0.2824 REMARK 3 T33: 0.1887 T12: -0.0396 REMARK 3 T13: 0.0201 T23: -0.0175 REMARK 3 L TENSOR REMARK 3 L11: 1.2852 L22: 1.7846 REMARK 3 L33: 1.6924 L12: -0.5622 REMARK 3 L13: -0.3872 L23: 0.3380 REMARK 3 S TENSOR REMARK 3 S11: 0.1061 S12: 0.0981 S13: 0.0985 REMARK 3 S21: -0.0915 S22: -0.0310 S23: -0.2003 REMARK 3 S31: -0.1154 S32: 0.3945 S33: -0.0680 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4K6X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-APR-13. REMARK 100 THE DEPOSITION ID IS D_1000078967. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-APR-12 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35185 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.970 REMARK 200 RESOLUTION RANGE LOW (A) : 85.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 8.100 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 7.80 REMARK 200 R MERGE FOR SHELL (I) : 0.65600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NA MALONATE, 1,4-DIOXANE AND REMARK 280 POLYVINYLPYRROLIDONE, PH 5.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 46.02500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 46.02500 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 116.37800 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 46.02500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 58.18900 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 46.02500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 174.56700 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 46.02500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 174.56700 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 46.02500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 58.18900 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 46.02500 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 46.02500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 116.37800 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 46.02500 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 46.02500 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 116.37800 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 46.02500 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 174.56700 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 46.02500 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 58.18900 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 46.02500 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 58.18900 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 46.02500 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 174.56700 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 46.02500 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 46.02500 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 116.37800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 405 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 507 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 436 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 573 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 43 REMARK 465 ASN A 44 REMARK 465 ALA A 45 REMARK 465 SER A 46 REMARK 465 ARG A 47 REMARK 465 ASP A 48 REMARK 465 ASP A 49 REMARK 465 LYS A 50 REMARK 465 LYS A 51 REMARK 465 ASP A 52 REMARK 465 GLY A 53 REMARK 465 VAL A 54 REMARK 465 ALA A 55 REMARK 465 GLY A 56 REMARK 465 SER B 43 REMARK 465 ASN B 44 REMARK 465 ALA B 45 REMARK 465 SER B 46 REMARK 465 ARG B 47 REMARK 465 ASP B 48 REMARK 465 ASP B 49 REMARK 465 LYS B 50 REMARK 465 LYS B 51 REMARK 465 ASP B 52 REMARK 465 GLY B 53 REMARK 465 VAL B 54 REMARK 465 ALA B 55 REMARK 465 GLY B 56 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP A 108 NH1 ARG A 181 6545 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 68 123.87 -39.01 REMARK 500 VAL A 186 -89.05 -124.94 REMARK 500 SER A 227 -72.87 -140.23 REMARK 500 ASP A 242 59.32 -90.51 REMARK 500 ALA A 251 49.93 -95.50 REMARK 500 VAL B 186 -95.67 -121.14 REMARK 500 SER B 227 -70.29 -141.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 EPE A 301 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DIO B 301 DBREF 4K6X A 46 255 UNP O33272 O33272_MYCTU 46 255 DBREF 4K6X B 46 255 UNP O33272 O33272_MYCTU 46 255 SEQADV 4K6X SER A 43 UNP O33272 EXPRESSION TAG SEQADV 4K6X ASN A 44 UNP O33272 EXPRESSION TAG SEQADV 4K6X ALA A 45 UNP O33272 EXPRESSION TAG SEQADV 4K6X SER B 43 UNP O33272 EXPRESSION TAG SEQADV 4K6X ASN B 44 UNP O33272 EXPRESSION TAG SEQADV 4K6X ALA B 45 UNP O33272 EXPRESSION TAG SEQRES 1 A 213 SER ASN ALA SER ARG ASP ASP LYS LYS ASP GLY VAL ALA SEQRES 2 A 213 GLY PRO GLY ASP ALA VAL ARG VAL THR SER SER LYS LEU SEQRES 3 A 213 VAL THR GLN PRO GLY THR SER ASN PRO LYS ALA VAL VAL SEQRES 4 A 213 SER PHE TYR GLU ASP PHE LEU CYS PRO ALA CYS GLY ILE SEQRES 5 A 213 PHE GLU ARG GLY PHE GLY PRO THR VAL SER LYS LEU VAL SEQRES 6 A 213 ASP ILE GLY ALA VAL ALA ALA ASP TYR THR MET VAL ALA SEQRES 7 A 213 ILE LEU ASP SER ALA SER ASN GLN HIS TYR SER SER ARG SEQRES 8 A 213 ALA ALA ALA ALA ALA TYR CYS VAL ALA ASP GLU SER ILE SEQRES 9 A 213 GLU ALA PHE ARG ARG PHE HIS ALA ALA LEU PHE SER LYS SEQRES 10 A 213 ASP ILE GLN PRO ALA GLU LEU GLY LYS ASP PHE PRO ASP SEQRES 11 A 213 ASN ALA ARG LEU ILE GLU LEU ALA ARG GLU ALA GLY VAL SEQRES 12 A 213 VAL GLY LYS VAL PRO ASP CYS ILE ASN SER GLY LYS TYR SEQRES 13 A 213 ILE GLU LYS VAL ASP GLY LEU ALA ALA ALA VAL ASN VAL SEQRES 14 A 213 HIS ALA THR PRO THR VAL ARG VAL ASN GLY THR GLU TYR SEQRES 15 A 213 GLU TRP SER THR PRO ALA ALA LEU VAL ALA LYS ILE LYS SEQRES 16 A 213 GLU ILE VAL GLY ASP VAL PRO GLY ILE ASP SER ALA ALA SEQRES 17 A 213 ALA THR ALA THR SER SEQRES 1 B 213 SER ASN ALA SER ARG ASP ASP LYS LYS ASP GLY VAL ALA SEQRES 2 B 213 GLY PRO GLY ASP ALA VAL ARG VAL THR SER SER LYS LEU SEQRES 3 B 213 VAL THR GLN PRO GLY THR SER ASN PRO LYS ALA VAL VAL SEQRES 4 B 213 SER PHE TYR GLU ASP PHE LEU CYS PRO ALA CYS GLY ILE SEQRES 5 B 213 PHE GLU ARG GLY PHE GLY PRO THR VAL SER LYS LEU VAL SEQRES 6 B 213 ASP ILE GLY ALA VAL ALA ALA ASP TYR THR MET VAL ALA SEQRES 7 B 213 ILE LEU ASP SER ALA SER ASN GLN HIS TYR SER SER ARG SEQRES 8 B 213 ALA ALA ALA ALA ALA TYR CYS VAL ALA ASP GLU SER ILE SEQRES 9 B 213 GLU ALA PHE ARG ARG PHE HIS ALA ALA LEU PHE SER LYS SEQRES 10 B 213 ASP ILE GLN PRO ALA GLU LEU GLY LYS ASP PHE PRO ASP SEQRES 11 B 213 ASN ALA ARG LEU ILE GLU LEU ALA ARG GLU ALA GLY VAL SEQRES 12 B 213 VAL GLY LYS VAL PRO ASP CYS ILE ASN SER GLY LYS TYR SEQRES 13 B 213 ILE GLU LYS VAL ASP GLY LEU ALA ALA ALA VAL ASN VAL SEQRES 14 B 213 HIS ALA THR PRO THR VAL ARG VAL ASN GLY THR GLU TYR SEQRES 15 B 213 GLU TRP SER THR PRO ALA ALA LEU VAL ALA LYS ILE LYS SEQRES 16 B 213 GLU ILE VAL GLY ASP VAL PRO GLY ILE ASP SER ALA ALA SEQRES 17 B 213 ALA THR ALA THR SER HET EPE A 301 26 HET DIO B 301 14 HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETNAM DIO 1,4-DIETHYLENE DIOXIDE HETSYN EPE HEPES FORMUL 3 EPE C8 H18 N2 O4 S FORMUL 4 DIO C4 H8 O2 FORMUL 5 HOH *412(H2 O) HELIX 1 1 CYS A 89 ILE A 109 1 21 HELIX 2 2 SER A 124 GLN A 128 5 5 HELIX 3 3 HIS A 129 SER A 145 1 17 HELIX 4 4 SER A 145 PHE A 157 1 13 HELIX 5 5 ASP A 172 ALA A 183 1 12 HELIX 6 6 LYS A 188 SER A 195 1 8 HELIX 7 7 TYR A 198 ASN A 210 1 13 HELIX 8 8 THR A 228 GLY A 241 1 14 HELIX 9 9 GLY A 245 ALA A 251 1 7 HELIX 10 10 CYS B 89 ILE B 109 1 21 HELIX 11 11 SER B 124 GLN B 128 5 5 HELIX 12 12 HIS B 129 SER B 145 1 17 HELIX 13 13 SER B 145 PHE B 157 1 13 HELIX 14 14 ASP B 172 GLY B 184 1 13 HELIX 15 15 LYS B 188 SER B 195 1 8 HELIX 16 16 TYR B 198 GLY B 204 1 7 HELIX 17 17 GLY B 204 ASN B 210 1 7 HELIX 18 18 THR B 228 GLY B 241 1 14 HELIX 19 19 GLY B 245 ALA B 250 1 6 SHEET 1 A 5 VAL A 61 VAL A 63 0 SHEET 2 A 5 ALA A 113 MET A 118 -1 O ALA A 114 N VAL A 63 SHEET 3 A 5 VAL A 80 GLU A 85 1 N PHE A 83 O ASP A 115 SHEET 4 A 5 THR A 216 VAL A 219 -1 O ARG A 218 N SER A 82 SHEET 5 A 5 THR A 222 GLU A 223 -1 O THR A 222 N VAL A 219 SHEET 1 B 5 VAL B 61 VAL B 63 0 SHEET 2 B 5 ALA B 113 MET B 118 -1 O ALA B 114 N VAL B 63 SHEET 3 B 5 VAL B 80 GLU B 85 1 N PHE B 83 O THR B 117 SHEET 4 B 5 THR B 216 VAL B 219 -1 O ARG B 218 N SER B 82 SHEET 5 B 5 THR B 222 GLU B 223 -1 O THR B 222 N VAL B 219 SSBOND 1 CYS A 89 CYS A 92 1555 1555 2.02 SSBOND 2 CYS A 140 CYS A 192 1555 1555 2.02 SSBOND 3 CYS B 89 CYS B 92 1555 1555 2.03 SSBOND 4 CYS B 140 CYS B 192 1555 1555 2.02 CISPEP 1 THR A 214 PRO A 215 0 -5.65 CISPEP 2 THR B 214 PRO B 215 0 -4.62 CISPEP 3 THR B 254 SER B 255 0 -9.86 SITE 1 AC1 4 PRO A 90 ILE A 94 HOH A 518 PRO B 90 SITE 1 AC2 6 ILE A 94 GLY A 98 PHE A 99 ILE B 94 SITE 2 AC2 6 GLY B 98 PHE B 99 CRYST1 92.050 92.050 232.756 90.00 90.00 90.00 I 41 2 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010864 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010864 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004296 0.00000