HEADER HYDROLASE/HYDROLASE INHIBITOR 18-APR-13 4K8B TITLE CRYSTAL STRUCTURE OF HCV NS3/4A PROTEASE COMPLEXED WITH INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: NS3 PROTEASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.4.21.98; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: NONSTRUCTURAL PROTEIN; COMPND 8 CHAIN: C, D; COMPND 9 FRAGMENT: UNP RESIDUES 107-118; COMPND 10 SYNONYM: NON-STRUCTURAL PROTEIN 4A; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HEPATITIS C VIRUS; SOURCE 3 ORGANISM_TAXID: 11103; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HEPATITIS C VIRUS; SOURCE 8 ORGANISM_TAXID: 11103; SOURCE 9 GENE: NS3-NS4; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEASE, HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR H.NAR REVDAT 2 08-NOV-23 4K8B 1 REMARK LINK REVDAT 1 26-MAR-14 4K8B 0 JRNL AUTH S.R.LAPLANTE,H.NAR,C.T.LEMKE,A.JAKALIAN,N.AUBRY,S.H.KAWAI JRNL TITL LIGAND BIOACTIVE CONFORMATION PLAYS A CRITICAL ROLE IN THE JRNL TITL 2 DESIGN OF DRUGS THAT TARGET THE HEPATITIS C VIRUS NS3 JRNL TITL 3 PROTEASE. JRNL REF J.MED.CHEM. V. 57 1777 2014 JRNL REFN ISSN 0022-2623 JRNL PMID 24144444 JRNL DOI 10.1021/JM401338C REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.4 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.93 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 14558 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 732 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 7 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 3.02 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.92 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2960 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2226 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2806 REMARK 3 BIN R VALUE (WORKING SET) : 0.2199 REMARK 3 BIN FREE R VALUE : 0.2766 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 154 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2772 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 122 REMARK 3 SOLVENT ATOMS : 90 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 64.49 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 69.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -10.24360 REMARK 3 B22 (A**2) : -10.24360 REMARK 3 B33 (A**2) : 20.48720 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.501 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.604 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.891 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.880 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2946 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4030 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 990 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 48 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 494 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2946 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 3 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 396 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3407 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.17 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.90 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 20.22 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|3 - A|179 A|201 - A|201 } REMARK 3 ORIGIN FOR THE GROUP (A): 26.6664 49.0996 49.2932 REMARK 3 T TENSOR REMARK 3 T11: -0.2176 T22: 0.2839 REMARK 3 T33: -0.0934 T12: -0.3253 REMARK 3 T13: 0.0860 T23: -0.1695 REMARK 3 L TENSOR REMARK 3 L11: 1.4494 L22: 2.9421 REMARK 3 L33: 5.1299 L12: 1.0481 REMARK 3 L13: -0.5574 L23: -0.5573 REMARK 3 S TENSOR REMARK 3 S11: 0.2382 S12: -0.1058 S13: -0.2460 REMARK 3 S21: 0.3587 S22: -0.5498 S23: 0.0122 REMARK 3 S31: 0.5394 S32: -0.4703 S33: 0.3116 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|3 - B|179 B|201 - B|201 } REMARK 3 ORIGIN FOR THE GROUP (A): 16.9666 71.4583 70.0490 REMARK 3 T TENSOR REMARK 3 T11: -0.1454 T22: 0.2332 REMARK 3 T33: -0.1787 T12: -0.4497 REMARK 3 T13: 0.0674 T23: -0.1634 REMARK 3 L TENSOR REMARK 3 L11: 5.0716 L22: 3.2026 REMARK 3 L33: 3.8241 L12: 0.1671 REMARK 3 L13: 1.1192 L23: 0.7607 REMARK 3 S TENSOR REMARK 3 S11: -0.2044 S12: 0.4003 S13: 0.3236 REMARK 3 S21: 0.5568 S22: -0.3925 S23: 0.1877 REMARK 3 S31: 0.1959 S32: -0.8734 S33: 0.5969 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4K8B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000079017. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-AUG-99 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : BW7B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.05 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15366 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 1JXP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0M AMMONIUM SULFATE, 0.2M SODIUM REMARK 280 PHOSPHATE, PH 5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 112.80400 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 56.40200 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 56.40200 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 112.80400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -72.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 PRO A 2 REMARK 465 ARG A 180 REMARK 465 SER A 181 REMARK 465 ALA B 1 REMARK 465 PRO B 2 REMARK 465 ARG B 180 REMARK 465 SER B 181 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 97 SG REMARK 620 2 CYS A 99 SG 132.6 REMARK 620 3 CYS A 145 SG 114.6 97.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 97 SG REMARK 620 2 CYS B 99 SG 133.2 REMARK 620 3 CYS B 145 SG 113.8 97.9 REMARK 620 N 1 2 REMARK 630 REMARK 630 MOLECULE TYPE: PEPTIDE-LIKE ENZYME INHIBITOR REMARK 630 MOLECULE NAME: N-(TERT-BUTYLCARBAMOYL)-3-METHYL-L-VALYL-(4R)-N- REMARK 630 [(1R,2S)-1-CARBOXY-2-ETHENYLCYCLOPROPYL]-4-[(7-METHOXY-2- REMARK 630 PHENYLQUINOLIN-4-YL)OXY]-L-PROLINAMIDE REMARK 630 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 630 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 630 REMARK 630 M RES C SSSEQI REMARK 630 1RR A 202 REMARK 630 1RR B 202 REMARK 630 SOURCE: NULL REMARK 630 TAXONOMY: NULL REMARK 630 SUBCOMP: TBB TBG YPR 0Y9 REMARK 630 DETAILS: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1RR A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1RR B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 301 DBREF 4K8B A 1 181 UNP Q0ZNA6 Q0ZNA6_9HEPC 1 181 DBREF 4K8B B 1 181 UNP Q0ZNA6 Q0ZNA6_9HEPC 1 181 DBREF 4K8B C 221 232 UNP Q81584 Q81584_9HEPC 107 118 DBREF 4K8B D 221 232 UNP Q81584 Q81584_9HEPC 107 118 SEQRES 1 A 181 ALA PRO ILE THR ALA TYR SER GLN GLN THR ARG GLY LEU SEQRES 2 A 181 LEU GLY CYS ILE ILE THR SER LEU THR GLY ARG ASP LYS SEQRES 3 A 181 ASN GLN VAL GLU GLY GLU VAL GLN VAL VAL SER THR ALA SEQRES 4 A 181 THR GLN SER PHE LEU ALA THR CYS VAL ASN GLY VAL CYS SEQRES 5 A 181 TRP THR VAL TYR HIS GLY ALA GLY SER LYS THR LEU ALA SEQRES 6 A 181 GLY PRO LYS GLY PRO ILE THR GLN MET TYR THR ASN VAL SEQRES 7 A 181 ASP GLN ASP LEU VAL GLY TRP GLN ALA PRO PRO GLY ALA SEQRES 8 A 181 ARG SER LEU THR PRO CYS THR CYS GLY SER SER ASP LEU SEQRES 9 A 181 TYR LEU VAL THR ARG HIS ALA ASP VAL ILE PRO VAL ARG SEQRES 10 A 181 ARG ARG GLY ASP SER ARG GLY SER LEU LEU SER PRO ARG SEQRES 11 A 181 PRO VAL SER TYR LEU LYS GLY SER SER GLY GLY PRO LEU SEQRES 12 A 181 LEU CYS PRO SER GLY HIS ALA VAL GLY ILE PHE ARG ALA SEQRES 13 A 181 ALA VAL CYS THR ARG GLY VAL ALA LYS ALA VAL ASP PHE SEQRES 14 A 181 VAL PRO VAL GLU SER MET GLU THR THR MET ARG SER SEQRES 1 B 181 ALA PRO ILE THR ALA TYR SER GLN GLN THR ARG GLY LEU SEQRES 2 B 181 LEU GLY CYS ILE ILE THR SER LEU THR GLY ARG ASP LYS SEQRES 3 B 181 ASN GLN VAL GLU GLY GLU VAL GLN VAL VAL SER THR ALA SEQRES 4 B 181 THR GLN SER PHE LEU ALA THR CYS VAL ASN GLY VAL CYS SEQRES 5 B 181 TRP THR VAL TYR HIS GLY ALA GLY SER LYS THR LEU ALA SEQRES 6 B 181 GLY PRO LYS GLY PRO ILE THR GLN MET TYR THR ASN VAL SEQRES 7 B 181 ASP GLN ASP LEU VAL GLY TRP GLN ALA PRO PRO GLY ALA SEQRES 8 B 181 ARG SER LEU THR PRO CYS THR CYS GLY SER SER ASP LEU SEQRES 9 B 181 TYR LEU VAL THR ARG HIS ALA ASP VAL ILE PRO VAL ARG SEQRES 10 B 181 ARG ARG GLY ASP SER ARG GLY SER LEU LEU SER PRO ARG SEQRES 11 B 181 PRO VAL SER TYR LEU LYS GLY SER SER GLY GLY PRO LEU SEQRES 12 B 181 LEU CYS PRO SER GLY HIS ALA VAL GLY ILE PHE ARG ALA SEQRES 13 B 181 ALA VAL CYS THR ARG GLY VAL ALA LYS ALA VAL ASP PHE SEQRES 14 B 181 VAL PRO VAL GLU SER MET GLU THR THR MET ARG SER SEQRES 1 C 12 GLY SER VAL VAL ILE VAL GLY ARG ILE ILE LEU SER SEQRES 1 D 12 GLY SER VAL VAL ILE VAL GLY ARG ILE ILE LEU SER HET ZN A 201 1 HET 1RR A 202 50 HET SO4 A 203 5 HET SO4 A 204 5 HET ZN B 201 1 HET 1RR B 202 50 HET SO4 B 203 5 HET SO4 D 301 5 HETNAM ZN ZINC ION HETNAM 1RR N-(TERT-BUTYLCARBAMOYL)-3-METHYL-L-VALYL-(4R)-N-[(1R, HETNAM 2 1RR 2S)-1-CARBOXY-2-ETHENYLCYCLOPROPYL]-4-[(7-METHOXY-2- HETNAM 3 1RR PHENYLQUINOLIN-4-YL)OXY]-L-PROLINAMIDE HETNAM SO4 SULFATE ION FORMUL 5 ZN 2(ZN 2+) FORMUL 6 1RR 2(C38 H47 N5 O7) FORMUL 7 SO4 4(O4 S 2-) FORMUL 13 HOH *90(H2 O) HELIX 1 1 GLY A 12 GLY A 23 1 12 HELIX 2 2 TYR A 56 GLY A 60 1 5 HELIX 3 3 VAL A 132 LYS A 136 1 5 HELIX 4 4 VAL A 172 MET A 179 1 8 HELIX 5 5 GLY B 12 GLY B 23 1 12 HELIX 6 6 TYR B 56 GLY B 60 1 5 HELIX 7 7 VAL B 132 LYS B 136 1 5 HELIX 8 8 VAL B 172 MET B 179 1 8 SHEET 1 A 7 ALA A 5 GLN A 9 0 SHEET 2 A 7 VAL C 224 LEU C 231 -1 O ILE C 230 N TYR A 6 SHEET 3 A 7 VAL A 33 SER A 37 -1 N SER A 37 O VAL C 224 SHEET 4 A 7 SER A 42 VAL A 48 -1 O ALA A 45 N GLN A 34 SHEET 5 A 7 VAL A 51 VAL A 55 -1 O TRP A 53 N THR A 46 SHEET 6 A 7 LEU A 82 GLN A 86 -1 O TRP A 85 N CYS A 52 SHEET 7 A 7 TYR A 75 ASN A 77 -1 N ASN A 77 O LEU A 82 SHEET 1 B 2 LEU A 64 GLY A 66 0 SHEET 2 B 2 GLY A 69 ILE A 71 -1 O ILE A 71 N LEU A 64 SHEET 1 C 7 ASP A 103 VAL A 107 0 SHEET 2 C 7 VAL A 113 ARG A 118 -1 O ILE A 114 N LEU A 106 SHEET 3 C 7 ARG A 123 PRO A 131 -1 O SER A 125 N ARG A 117 SHEET 4 C 7 VAL A 163 PRO A 171 -1 O VAL A 167 N GLY A 124 SHEET 5 C 7 ALA A 150 THR A 160 -1 N ALA A 156 O ASP A 168 SHEET 6 C 7 PRO A 142 LEU A 144 -1 N LEU A 143 O VAL A 151 SHEET 7 C 7 ASP A 103 VAL A 107 -1 N TYR A 105 O LEU A 144 SHEET 1 D 4 ALA B 5 GLN B 9 0 SHEET 2 D 4 SER D 222 LEU D 231 -1 O ILE D 230 N TYR B 6 SHEET 3 D 4 THR B 63 GLY B 66 1 N THR B 63 O VAL D 223 SHEET 4 D 4 GLY B 69 ILE B 71 -1 O ILE B 71 N LEU B 64 SHEET 1 E 7 ALA B 5 GLN B 9 0 SHEET 2 E 7 SER D 222 LEU D 231 -1 O ILE D 230 N TYR B 6 SHEET 3 E 7 VAL B 33 SER B 37 -1 N SER B 37 O VAL D 224 SHEET 4 E 7 SER B 42 VAL B 48 -1 O ALA B 45 N GLN B 34 SHEET 5 E 7 VAL B 51 VAL B 55 -1 O TRP B 53 N THR B 46 SHEET 6 E 7 LEU B 82 GLN B 86 -1 O TRP B 85 N CYS B 52 SHEET 7 E 7 TYR B 75 ASN B 77 -1 N ASN B 77 O LEU B 82 SHEET 1 F 7 ASP B 103 VAL B 107 0 SHEET 2 F 7 VAL B 113 ARG B 118 -1 O ILE B 114 N LEU B 106 SHEET 3 F 7 ARG B 123 PRO B 131 -1 O SER B 125 N ARG B 117 SHEET 4 F 7 VAL B 163 PRO B 171 -1 O VAL B 167 N GLY B 124 SHEET 5 F 7 ALA B 150 THR B 160 -1 N ALA B 156 O ASP B 168 SHEET 6 F 7 PRO B 142 LEU B 144 -1 N LEU B 143 O VAL B 151 SHEET 7 F 7 ASP B 103 VAL B 107 -1 N TYR B 105 O LEU B 144 LINK SG CYS A 97 ZN ZN A 201 1555 1555 2.18 LINK SG CYS A 99 ZN ZN A 201 1555 1555 2.16 LINK SG CYS A 145 ZN ZN A 201 1555 1555 2.62 LINK SG CYS B 97 ZN ZN B 201 1555 1555 2.17 LINK SG CYS B 99 ZN ZN B 201 1555 1555 2.18 LINK SG CYS B 145 ZN ZN B 201 1555 1555 2.61 SITE 1 AC1 5 CYS A 97 THR A 98 CYS A 99 CYS A 145 SITE 2 AC1 5 HOH A 306 SITE 1 AC2 21 TYR A 56 HIS A 57 VAL A 78 ASP A 79 SITE 2 AC2 21 ASP A 81 ARG A 123 VAL A 132 LEU A 135 SITE 3 AC2 21 LYS A 136 GLY A 137 SER A 138 SER A 139 SITE 4 AC2 21 PHE A 154 ARG A 155 ALA A 156 ALA A 157 SITE 5 AC2 21 CYS A 159 ASP A 168 HOH A 345 VAL B 78 SITE 6 AC2 21 1RR B 202 SITE 1 AC3 6 ARG A 11 GLY A 15 ASN A 27 ARG B 11 SITE 2 AC3 6 GLY B 15 ASN B 27 SITE 1 AC4 7 LEU A 21 ARG A 24 LYS A 26 HOH A 331 SITE 2 AC4 7 GLN B 9 GLY B 12 LEU B 13 SITE 1 AC5 5 CYS B 97 THR B 98 CYS B 99 CYS B 145 SITE 2 AC5 5 HOH B 325 SITE 1 AC6 22 TYR A 56 ASP A 79 1RR A 202 TYR B 56 SITE 2 AC6 22 HIS B 57 ASP B 79 ASP B 81 ARG B 123 SITE 3 AC6 22 VAL B 132 LEU B 135 LYS B 136 GLY B 137 SITE 4 AC6 22 SER B 138 SER B 139 PHE B 154 ARG B 155 SITE 5 AC6 22 ALA B 156 ALA B 157 CYS B 159 HOH B 302 SITE 6 AC6 22 HOH B 314 HOH B 316 SITE 1 AC7 5 GLY A 12 LEU A 13 LEU A 14 ARG B 24 SITE 2 AC7 5 LYS B 26 SITE 1 AC8 5 GLN A 28 GLU A 30 GLN B 28 ARG C 228 SITE 2 AC8 5 ARG D 228 CRYST1 76.182 76.182 169.206 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013126 0.007579 0.000000 0.00000 SCALE2 0.000000 0.015157 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005910 0.00000