HEADER LYASE 20-APR-13 4K9Q TITLE THE CRYSTAL STRUCTURE OF BENZOYLFORMATE DECARBOXYLASE FROM TITLE 2 POLYNUCLEOBACTER NECESSARIUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: BENZOYLFORMATE DECARBOXYLASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: THIAMINE PYROPHOSPHATE ENZYME TPP BINDING DOMAIN PROTEIN; COMPND 5 EC: 4.1.1.7; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: POLYNUCLEOBACTER NECESSARIUS; SOURCE 3 ORGANISM_TAXID: 576610; SOURCE 4 GENE: PNUC_1088; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS THIAMINE DIPHOSPHATE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR H.R.BRODKIN,W.R.P.NOVAK,M.J.MCLEISH REVDAT 2 20-SEP-23 4K9Q 1 REMARK SEQADV LINK REVDAT 1 23-APR-14 4K9Q 0 JRNL AUTH H.R.BRODKIN,F.H.ANDREWS,W.R.P.NOVAK,G.A.PETSKO,D.RINGE, JRNL AUTH 2 M.J.MCLEISH JRNL TITL THE CRYSTAL STRUCTURE OF BENZOYLFORMATE DECARBOXYLASE FROM JRNL TITL 2 POLYNUCLEOBACTER NECESSARIUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.82 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.0 REMARK 3 NUMBER OF REFLECTIONS : 133506 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.400 REMARK 3 FREE R VALUE TEST SET COUNT : 1863 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.8485 - 3.7573 0.99 11738 166 0.1306 0.1432 REMARK 3 2 3.7573 - 2.9824 0.99 11430 163 0.1426 0.1539 REMARK 3 3 2.9824 - 2.6054 0.99 11348 162 0.1678 0.2031 REMARK 3 4 2.6054 - 2.3672 0.99 11268 159 0.1595 0.2010 REMARK 3 5 2.3672 - 2.1975 0.98 11146 160 0.1514 0.1903 REMARK 3 6 2.1975 - 2.0680 0.97 11052 155 0.1606 0.1763 REMARK 3 7 2.0680 - 1.9644 0.96 10912 155 0.1654 0.2116 REMARK 3 8 1.9644 - 1.8789 0.94 10625 153 0.1696 0.1957 REMARK 3 9 1.8789 - 1.8065 0.92 10360 149 0.1781 0.2271 REMARK 3 10 1.8065 - 1.7442 0.87 9794 140 0.2041 0.2527 REMARK 3 11 1.7442 - 1.6897 0.78 8767 119 0.2448 0.2783 REMARK 3 12 1.6897 - 1.6414 0.67 7510 107 0.2907 0.3592 REMARK 3 13 1.6414 - 1.5980 0.51 5693 75 0.3188 0.2552 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.38 REMARK 3 B_SOL : 40.24 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.43350 REMARK 3 B22 (A**2) : 5.87220 REMARK 3 B33 (A**2) : -4.43880 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 8547 REMARK 3 ANGLE : 1.128 11686 REMARK 3 CHIRALITY : 0.075 1333 REMARK 3 PLANARITY : 0.005 1522 REMARK 3 DIHEDRAL : 13.702 3214 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4K9Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-APR-13. REMARK 100 THE DEPOSITION ID IS D_1000079068. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-AUG-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL CRYO-COOLED REMARK 200 SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 133506 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.598 REMARK 200 RESOLUTION RANGE LOW (A) : 49.824 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.11200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 67.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.81300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 1BFD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8 M AMMONIUM SULFATE, 100 MM TRIS, REMARK 280 PH 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 33.86850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.47650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.86850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 52.47650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 26670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 63030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -163.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 104.95300 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 701 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 754 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 845 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 964 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1241 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 701 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 762 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 810 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 845 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 910 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE A 532 REMARK 465 GLY A 533 REMARK 465 HIS A 534 REMARK 465 HIS A 535 REMARK 465 HIS A 536 REMARK 465 HIS A 537 REMARK 465 HIS A 538 REMARK 465 HIS A 539 REMARK 465 MET B 1 REMARK 465 PHE B 532 REMARK 465 GLY B 533 REMARK 465 HIS B 534 REMARK 465 HIS B 535 REMARK 465 HIS B 536 REMARK 465 HIS B 537 REMARK 465 HIS B 538 REMARK 465 HIS B 539 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 365 CG CD CE NZ REMARK 470 LYS B 365 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP B 242 O HOH B 1203 1.91 REMARK 500 OD1 ASP A 171 O HOH A 1227 1.96 REMARK 500 O HOH B 1036 O HOH B 1037 2.01 REMARK 500 O HOH B 951 O HOH B 1159 2.02 REMARK 500 O HOH B 872 O HOH B 1036 2.03 REMARK 500 O HOH A 936 O HOH A 1122 2.08 REMARK 500 NH2 ARG B 2 OE1 GLU B 169 2.09 REMARK 500 O HOH A 906 O HOH A 1094 2.12 REMARK 500 O HOH A 926 O HOH A 1090 2.13 REMARK 500 O HOH A 1063 O HOH A 1091 2.14 REMARK 500 O HOH A 1090 O HOH A 1114 2.15 REMARK 500 OD2 ASP B 242 O HOH B 1148 2.16 REMARK 500 OE2 GLU B 114 O HOH B 1029 2.17 REMARK 500 O HOH A 926 O HOH A 1114 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 71 -149.22 45.21 REMARK 500 PRO A 108 -178.75 -68.74 REMARK 500 PRO A 121 32.15 -97.92 REMARK 500 TYR A 278 -74.76 -134.43 REMARK 500 GLU A 372 69.64 -151.06 REMARK 500 THR B 71 -145.96 39.50 REMARK 500 PRO B 121 34.15 -97.36 REMARK 500 TYR B 278 -78.64 -131.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 429 OD1 REMARK 620 2 ASN A 456 OD1 92.1 REMARK 620 3 GLU A 458 O 104.1 85.6 REMARK 620 4 TPP A 602 O2A 84.5 173.9 90.3 REMARK 620 5 TPP A 602 O3B 166.8 96.0 86.9 88.2 REMARK 620 6 HOH A 753 O 86.7 89.8 168.4 95.1 83.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 429 OD1 REMARK 620 2 ASN B 456 OD1 90.6 REMARK 620 3 GLU B 458 O 102.7 85.5 REMARK 620 4 TPP B 602 O1A 81.6 171.5 92.7 REMARK 620 5 TPP B 602 O1B 163.7 101.3 89.4 87.0 REMARK 620 6 HOH B1182 O 86.2 86.3 167.9 96.6 83.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TPP A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TPP B 602 DBREF 4K9Q A 1 533 UNP A4SXU0 A4SXU0_POLSQ 1 533 DBREF 4K9Q B 1 533 UNP A4SXU0 A4SXU0_POLSQ 1 533 SEQADV 4K9Q HIS A 534 UNP A4SXU0 EXPRESSION TAG SEQADV 4K9Q HIS A 535 UNP A4SXU0 EXPRESSION TAG SEQADV 4K9Q HIS A 536 UNP A4SXU0 EXPRESSION TAG SEQADV 4K9Q HIS A 537 UNP A4SXU0 EXPRESSION TAG SEQADV 4K9Q HIS A 538 UNP A4SXU0 EXPRESSION TAG SEQADV 4K9Q HIS A 539 UNP A4SXU0 EXPRESSION TAG SEQADV 4K9Q HIS B 534 UNP A4SXU0 EXPRESSION TAG SEQADV 4K9Q HIS B 535 UNP A4SXU0 EXPRESSION TAG SEQADV 4K9Q HIS B 536 UNP A4SXU0 EXPRESSION TAG SEQADV 4K9Q HIS B 537 UNP A4SXU0 EXPRESSION TAG SEQADV 4K9Q HIS B 538 UNP A4SXU0 EXPRESSION TAG SEQADV 4K9Q HIS B 539 UNP A4SXU0 EXPRESSION TAG SEQRES 1 A 539 MET ARG THR VAL LYS GLU ILE THR PHE ASP LEU LEU ARG SEQRES 2 A 539 LYS LEU GLN VAL THR THR VAL VAL GLY ASN PRO GLY SER SEQRES 3 A 539 THR GLU GLU THR PHE LEU LYS ASP PHE PRO SER ASP PHE SEQRES 4 A 539 ASN TYR VAL LEU ALA LEU GLN GLU ALA SER VAL VAL ALA SEQRES 5 A 539 ILE ALA ASP GLY LEU SER GLN SER LEU ARG LYS PRO VAL SEQRES 6 A 539 ILE VAL ASN ILE HIS THR GLY ALA GLY LEU GLY ASN ALA SEQRES 7 A 539 MET GLY CYS LEU LEU THR ALA TYR GLN ASN LYS THR PRO SEQRES 8 A 539 LEU ILE ILE THR ALA GLY GLN GLN THR ARG GLU MET LEU SEQRES 9 A 539 LEU ASN GLU PRO LEU LEU THR ASN ILE GLU ALA ILE ASN SEQRES 10 A 539 MET PRO LYS PRO TRP VAL LYS TRP SER TYR GLU PRO ALA SEQRES 11 A 539 ARG PRO GLU ASP VAL PRO GLY ALA PHE MET ARG ALA TYR SEQRES 12 A 539 ALA THR ALA MET GLN GLN PRO GLN GLY PRO VAL PHE LEU SEQRES 13 A 539 SER LEU PRO LEU ASP ASP TRP GLU LYS LEU ILE PRO GLU SEQRES 14 A 539 VAL ASP VAL ALA ARG THR VAL SER THR ARG GLN GLY PRO SEQRES 15 A 539 ASP PRO ASP LYS VAL LYS GLU PHE ALA GLN ARG ILE THR SEQRES 16 A 539 ALA SER LYS ASN PRO LEU LEU ILE TYR GLY SER ASP ILE SEQRES 17 A 539 ALA ARG SER GLN ALA TRP SER ASP GLY ILE ALA PHE ALA SEQRES 18 A 539 GLU ARG LEU ASN ALA PRO VAL TRP ALA ALA PRO PHE ALA SEQRES 19 A 539 GLU ARG THR PRO PHE PRO GLU ASP HIS PRO LEU PHE GLN SEQRES 20 A 539 GLY ALA LEU THR SER GLY ILE GLY SER LEU GLU LYS GLN SEQRES 21 A 539 ILE GLN GLY HIS ASP LEU ILE VAL VAL ILE GLY ALA PRO SEQRES 22 A 539 VAL PHE ARG TYR TYR PRO TRP ILE ALA GLY GLN PHE ILE SEQRES 23 A 539 PRO GLU GLY SER THR LEU LEU GLN VAL SER ASP ASP PRO SEQRES 24 A 539 ASN MET THR SER LYS ALA VAL VAL GLY ASP SER LEU VAL SEQRES 25 A 539 SER ASP SER LYS LEU PHE LEU ILE GLU ALA LEU LYS LEU SEQRES 26 A 539 ILE ASP GLN ARG GLU LYS ASN ASN THR PRO GLN ARG SER SEQRES 27 A 539 PRO MET THR LYS GLU ASP ARG THR ALA MET PRO LEU ARG SEQRES 28 A 539 PRO HIS ALA VAL LEU GLU VAL LEU LYS GLU ASN SER PRO SEQRES 29 A 539 LYS GLU ILE VAL LEU VAL GLU GLU CYS PRO SER ILE VAL SEQRES 30 A 539 PRO LEU MET GLN ASP VAL PHE ARG ILE ASN GLN PRO ASP SEQRES 31 A 539 THR PHE TYR THR PHE ALA SER GLY GLY LEU GLY TRP ASP SEQRES 32 A 539 LEU PRO ALA ALA VAL GLY LEU ALA LEU GLY GLU GLU VAL SEQRES 33 A 539 SER GLY ARG ASN ARG PRO VAL VAL THR LEU MET GLY ASP SEQRES 34 A 539 GLY SER PHE GLN TYR SER VAL GLN GLY ILE TYR THR GLY SEQRES 35 A 539 VAL GLN GLN LYS THR HIS VAL ILE TYR VAL VAL PHE GLN SEQRES 36 A 539 ASN GLU GLU TYR GLY ILE LEU LYS GLN PHE ALA GLU LEU SEQRES 37 A 539 GLU GLN THR PRO ASN VAL PRO GLY LEU ASP LEU PRO GLY SEQRES 38 A 539 LEU ASP ILE VAL ALA GLN GLY LYS ALA TYR GLY ALA LYS SEQRES 39 A 539 SER LEU LYS VAL GLU THR LEU ASP GLU LEU LYS THR ALA SEQRES 40 A 539 TYR LEU GLU ALA LEU SER PHE LYS GLY THR SER VAL ILE SEQRES 41 A 539 VAL VAL PRO ILE THR LYS GLU LEU LYS PRO LEU PHE GLY SEQRES 42 A 539 HIS HIS HIS HIS HIS HIS SEQRES 1 B 539 MET ARG THR VAL LYS GLU ILE THR PHE ASP LEU LEU ARG SEQRES 2 B 539 LYS LEU GLN VAL THR THR VAL VAL GLY ASN PRO GLY SER SEQRES 3 B 539 THR GLU GLU THR PHE LEU LYS ASP PHE PRO SER ASP PHE SEQRES 4 B 539 ASN TYR VAL LEU ALA LEU GLN GLU ALA SER VAL VAL ALA SEQRES 5 B 539 ILE ALA ASP GLY LEU SER GLN SER LEU ARG LYS PRO VAL SEQRES 6 B 539 ILE VAL ASN ILE HIS THR GLY ALA GLY LEU GLY ASN ALA SEQRES 7 B 539 MET GLY CYS LEU LEU THR ALA TYR GLN ASN LYS THR PRO SEQRES 8 B 539 LEU ILE ILE THR ALA GLY GLN GLN THR ARG GLU MET LEU SEQRES 9 B 539 LEU ASN GLU PRO LEU LEU THR ASN ILE GLU ALA ILE ASN SEQRES 10 B 539 MET PRO LYS PRO TRP VAL LYS TRP SER TYR GLU PRO ALA SEQRES 11 B 539 ARG PRO GLU ASP VAL PRO GLY ALA PHE MET ARG ALA TYR SEQRES 12 B 539 ALA THR ALA MET GLN GLN PRO GLN GLY PRO VAL PHE LEU SEQRES 13 B 539 SER LEU PRO LEU ASP ASP TRP GLU LYS LEU ILE PRO GLU SEQRES 14 B 539 VAL ASP VAL ALA ARG THR VAL SER THR ARG GLN GLY PRO SEQRES 15 B 539 ASP PRO ASP LYS VAL LYS GLU PHE ALA GLN ARG ILE THR SEQRES 16 B 539 ALA SER LYS ASN PRO LEU LEU ILE TYR GLY SER ASP ILE SEQRES 17 B 539 ALA ARG SER GLN ALA TRP SER ASP GLY ILE ALA PHE ALA SEQRES 18 B 539 GLU ARG LEU ASN ALA PRO VAL TRP ALA ALA PRO PHE ALA SEQRES 19 B 539 GLU ARG THR PRO PHE PRO GLU ASP HIS PRO LEU PHE GLN SEQRES 20 B 539 GLY ALA LEU THR SER GLY ILE GLY SER LEU GLU LYS GLN SEQRES 21 B 539 ILE GLN GLY HIS ASP LEU ILE VAL VAL ILE GLY ALA PRO SEQRES 22 B 539 VAL PHE ARG TYR TYR PRO TRP ILE ALA GLY GLN PHE ILE SEQRES 23 B 539 PRO GLU GLY SER THR LEU LEU GLN VAL SER ASP ASP PRO SEQRES 24 B 539 ASN MET THR SER LYS ALA VAL VAL GLY ASP SER LEU VAL SEQRES 25 B 539 SER ASP SER LYS LEU PHE LEU ILE GLU ALA LEU LYS LEU SEQRES 26 B 539 ILE ASP GLN ARG GLU LYS ASN ASN THR PRO GLN ARG SER SEQRES 27 B 539 PRO MET THR LYS GLU ASP ARG THR ALA MET PRO LEU ARG SEQRES 28 B 539 PRO HIS ALA VAL LEU GLU VAL LEU LYS GLU ASN SER PRO SEQRES 29 B 539 LYS GLU ILE VAL LEU VAL GLU GLU CYS PRO SER ILE VAL SEQRES 30 B 539 PRO LEU MET GLN ASP VAL PHE ARG ILE ASN GLN PRO ASP SEQRES 31 B 539 THR PHE TYR THR PHE ALA SER GLY GLY LEU GLY TRP ASP SEQRES 32 B 539 LEU PRO ALA ALA VAL GLY LEU ALA LEU GLY GLU GLU VAL SEQRES 33 B 539 SER GLY ARG ASN ARG PRO VAL VAL THR LEU MET GLY ASP SEQRES 34 B 539 GLY SER PHE GLN TYR SER VAL GLN GLY ILE TYR THR GLY SEQRES 35 B 539 VAL GLN GLN LYS THR HIS VAL ILE TYR VAL VAL PHE GLN SEQRES 36 B 539 ASN GLU GLU TYR GLY ILE LEU LYS GLN PHE ALA GLU LEU SEQRES 37 B 539 GLU GLN THR PRO ASN VAL PRO GLY LEU ASP LEU PRO GLY SEQRES 38 B 539 LEU ASP ILE VAL ALA GLN GLY LYS ALA TYR GLY ALA LYS SEQRES 39 B 539 SER LEU LYS VAL GLU THR LEU ASP GLU LEU LYS THR ALA SEQRES 40 B 539 TYR LEU GLU ALA LEU SER PHE LYS GLY THR SER VAL ILE SEQRES 41 B 539 VAL VAL PRO ILE THR LYS GLU LEU LYS PRO LEU PHE GLY SEQRES 42 B 539 HIS HIS HIS HIS HIS HIS HET MG A 601 1 HET TPP A 602 26 HET MG B 601 1 HET TPP B 602 26 HETNAM MG MAGNESIUM ION HETNAM TPP THIAMINE DIPHOSPHATE FORMUL 3 MG 2(MG 2+) FORMUL 4 TPP 2(C12 H19 N4 O7 P2 S 1+) FORMUL 7 HOH *1111(H2 O) HELIX 1 1 VAL A 4 GLN A 16 1 13 HELIX 2 2 GLY A 25 THR A 27 5 3 HELIX 3 3 GLU A 28 LYS A 33 1 6 HELIX 4 4 GLN A 46 ARG A 62 1 17 HELIX 5 5 HIS A 70 ALA A 78 1 9 HELIX 6 6 ALA A 78 LYS A 89 1 12 HELIX 7 7 MET A 103 GLU A 107 5 5 HELIX 8 8 GLU A 114 MET A 118 5 5 HELIX 9 9 ARG A 131 GLU A 133 5 3 HELIX 10 10 ASP A 134 GLN A 148 1 15 HELIX 11 11 ASP A 161 TRP A 163 5 3 HELIX 12 12 ASP A 183 SER A 197 1 15 HELIX 13 13 SER A 206 SER A 211 1 6 HELIX 14 14 ALA A 213 ASN A 225 1 13 HELIX 15 15 GLY A 253 ILE A 261 1 9 HELIX 16 16 ASP A 298 LYS A 304 1 7 HELIX 17 17 ASP A 314 LYS A 324 1 11 HELIX 18 18 ARG A 351 ASN A 362 1 12 HELIX 19 19 CYS A 373 SER A 375 5 3 HELIX 20 20 ILE A 376 PHE A 384 1 9 HELIX 21 21 TRP A 402 GLY A 418 1 17 HELIX 22 22 ASP A 429 TYR A 434 1 6 HELIX 23 23 GLN A 437 LYS A 446 1 10 HELIX 24 24 TYR A 459 GLU A 469 1 11 HELIX 25 25 ASP A 483 TYR A 491 1 9 HELIX 26 26 THR A 500 PHE A 514 1 15 HELIX 27 27 THR B 3 GLN B 16 1 14 HELIX 28 28 GLY B 25 THR B 27 5 3 HELIX 29 29 GLU B 28 LYS B 33 1 6 HELIX 30 30 GLN B 46 ARG B 62 1 17 HELIX 31 31 HIS B 70 ALA B 78 1 9 HELIX 32 32 ALA B 78 LYS B 89 1 12 HELIX 33 33 MET B 103 GLU B 107 5 5 HELIX 34 34 GLU B 114 MET B 118 5 5 HELIX 35 35 ARG B 131 GLU B 133 5 3 HELIX 36 36 ASP B 134 GLN B 148 1 15 HELIX 37 37 ASP B 161 TRP B 163 5 3 HELIX 38 38 ASP B 183 SER B 197 1 15 HELIX 39 39 SER B 206 SER B 211 1 6 HELIX 40 40 ALA B 213 ASN B 225 1 13 HELIX 41 41 GLY B 253 ILE B 261 1 9 HELIX 42 42 ASP B 298 LYS B 304 1 7 HELIX 43 43 ASP B 314 LYS B 324 1 11 HELIX 44 44 ARG B 351 ASN B 362 1 12 HELIX 45 45 CYS B 373 SER B 375 5 3 HELIX 46 46 ILE B 376 PHE B 384 1 9 HELIX 47 47 TRP B 402 GLY B 418 1 17 HELIX 48 48 ASP B 429 TYR B 434 1 6 HELIX 49 49 GLN B 437 LYS B 446 1 10 HELIX 50 50 TYR B 459 GLU B 469 1 11 HELIX 51 51 ASP B 483 TYR B 491 1 9 HELIX 52 52 THR B 500 PHE B 514 1 15 SHEET 1 A 2 ARG A 2 THR A 3 0 SHEET 2 A 2 LEU A 166 ILE A 167 -1 O ILE A 167 N ARG A 2 SHEET 1 B 6 ASN A 40 LEU A 43 0 SHEET 2 B 6 THR A 19 GLY A 22 1 N VAL A 20 O ASN A 40 SHEET 3 B 6 ILE A 66 ILE A 69 1 O ILE A 66 N VAL A 21 SHEET 4 B 6 ILE A 93 GLN A 98 1 O THR A 95 N VAL A 67 SHEET 5 B 6 VAL A 154 PRO A 159 1 O VAL A 154 N ILE A 94 SHEET 6 B 6 SER A 126 TYR A 127 1 N TYR A 127 O SER A 157 SHEET 1 C 2 GLN A 180 GLY A 181 0 SHEET 2 C 2 GLY B 181 PRO B 182 -1 O GLY B 181 N GLY A 181 SHEET 1 D 6 PHE A 246 ALA A 249 0 SHEET 2 D 6 VAL A 228 ALA A 230 1 N VAL A 228 O GLN A 247 SHEET 3 D 6 LEU A 201 TYR A 204 1 N TYR A 204 O TRP A 229 SHEET 4 D 6 LEU A 266 ILE A 270 1 O VAL A 268 N LEU A 201 SHEET 5 D 6 THR A 291 SER A 296 1 O LEU A 293 N VAL A 269 SHEET 6 D 6 ASP A 309 VAL A 312 1 O ASP A 309 N LEU A 292 SHEET 1 E 6 PHE A 392 TYR A 393 0 SHEET 2 E 6 VAL A 368 GLU A 372 1 N LEU A 369 O TYR A 393 SHEET 3 E 6 VAL A 423 GLY A 428 1 O VAL A 424 N VAL A 368 SHEET 4 E 6 VAL A 449 GLN A 455 1 O ILE A 450 N THR A 425 SHEET 5 E 6 THR A 517 PRO A 523 1 O ILE A 520 N TYR A 451 SHEET 6 E 6 LYS A 494 LYS A 497 1 N LYS A 494 O VAL A 519 SHEET 1 F 6 ASN B 40 LEU B 43 0 SHEET 2 F 6 THR B 19 GLY B 22 1 N VAL B 20 O ASN B 40 SHEET 3 F 6 ILE B 66 ILE B 69 1 O ILE B 66 N VAL B 21 SHEET 4 F 6 ILE B 93 GLN B 98 1 O ILE B 93 N VAL B 67 SHEET 5 F 6 VAL B 154 PRO B 159 1 O VAL B 154 N ILE B 94 SHEET 6 F 6 SER B 126 TYR B 127 1 N TYR B 127 O SER B 157 SHEET 1 G 6 PHE B 246 ALA B 249 0 SHEET 2 G 6 VAL B 228 ALA B 230 1 N VAL B 228 O GLN B 247 SHEET 3 G 6 LEU B 201 TYR B 204 1 N TYR B 204 O TRP B 229 SHEET 4 G 6 LEU B 266 ILE B 270 1 O VAL B 268 N LEU B 201 SHEET 5 G 6 THR B 291 SER B 296 1 O LEU B 293 N VAL B 269 SHEET 6 G 6 ASP B 309 VAL B 312 1 O ASP B 309 N LEU B 292 SHEET 1 H 6 PHE B 392 TYR B 393 0 SHEET 2 H 6 VAL B 368 GLU B 372 1 N LEU B 369 O TYR B 393 SHEET 3 H 6 VAL B 423 GLY B 428 1 O LEU B 426 N GLU B 372 SHEET 4 H 6 VAL B 449 GLN B 455 1 O ILE B 450 N THR B 425 SHEET 5 H 6 THR B 517 PRO B 523 1 O ILE B 520 N TYR B 451 SHEET 6 H 6 LYS B 494 LYS B 497 1 N LYS B 494 O VAL B 519 LINK OD1 ASP A 429 MG MG A 601 1555 1555 2.22 LINK OD1 ASN A 456 MG MG A 601 1555 1555 2.19 LINK O GLU A 458 MG MG A 601 1555 1555 2.29 LINK MG MG A 601 O2A TPP A 602 1555 1555 2.18 LINK MG MG A 601 O3B TPP A 602 1555 1555 2.25 LINK MG MG A 601 O HOH A 753 1555 1555 2.35 LINK OD1 ASP B 429 MG MG B 601 1555 1555 2.26 LINK OD1 ASN B 456 MG MG B 601 1555 1555 2.23 LINK O GLU B 458 MG MG B 601 1555 1555 2.28 LINK MG MG B 601 O1A TPP B 602 1555 1555 2.18 LINK MG MG B 601 O1B TPP B 602 1555 1555 2.23 LINK MG MG B 601 O HOH B1182 1555 1555 2.40 CISPEP 1 LYS A 120 PRO A 121 0 7.23 CISPEP 2 GLN A 149 PRO A 150 0 -5.44 CISPEP 3 VAL A 274 PHE A 275 0 -9.25 CISPEP 4 MET A 348 PRO A 349 0 -0.48 CISPEP 5 LYS B 120 PRO B 121 0 4.91 CISPEP 6 GLN B 149 PRO B 150 0 -6.33 CISPEP 7 VAL B 274 PHE B 275 0 -9.61 CISPEP 8 MET B 348 PRO B 349 0 1.63 SITE 1 AC1 5 ASP A 429 ASN A 456 GLU A 458 TPP A 602 SITE 2 AC1 5 HOH A 753 SITE 1 AC2 24 ASN A 23 PRO A 24 GLY A 25 GLU A 47 SITE 2 AC2 24 HIS A 70 ASN A 77 PRO A 374 SER A 375 SITE 3 AC2 24 GLY A 398 LEU A 400 GLY A 428 ASP A 429 SITE 4 AC2 24 GLY A 430 SER A 431 TYR A 434 ASN A 456 SITE 5 AC2 24 GLU A 458 TYR A 459 GLY A 460 ILE A 461 SITE 6 AC2 24 LEU A 462 MG A 601 HOH A 753 HOH A 932 SITE 1 AC3 5 ASP B 429 ASN B 456 GLU B 458 TPP B 602 SITE 2 AC3 5 HOH B1182 SITE 1 AC4 24 ASN B 23 PRO B 24 GLY B 25 GLU B 47 SITE 2 AC4 24 HIS B 70 ASN B 77 CYS B 373 PRO B 374 SITE 3 AC4 24 SER B 375 GLY B 398 LEU B 400 GLY B 428 SITE 4 AC4 24 ASP B 429 GLY B 430 SER B 431 TYR B 434 SITE 5 AC4 24 ASN B 456 GLU B 458 TYR B 459 GLY B 460 SITE 6 AC4 24 ILE B 461 LEU B 462 MG B 601 HOH B1182 CRYST1 67.737 104.953 158.731 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014763 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009528 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006300 0.00000