HEADER TRANSFERASE 29-APR-13 4KGZ TITLE THE R STATE STRUCTURE OF E. COLI ATCASE WITH UTP AND MAGNESIUM BOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: ASPARTATE CARBAMOYLTRANSFERASE; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: ASPARTATE TRANSCARBAMYLASE; COMPND 5 EC: 2.1.3.2; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ASPARTATE CARBAMOYLTRANSFERASE REGULATORY CHAIN; COMPND 9 CHAIN: B, D; COMPND 10 EC: 2.1.3.2; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 595495; SOURCE 4 STRAIN: ATCC 55124 / KO11; SOURCE 5 GENE: PYRB, EKO11_4066, KO11_22860; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 10 ORGANISM_TAXID: 595495; SOURCE 11 STRAIN: ATCC 55124 / KO11; SOURCE 12 GENE: PYRI, EKO11_4067, KO11_22855; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PYRIMIDINE NUCLEOTIDE BIOSYNTHESIS, FEEDBACK INHIBITION, COMPETING KEYWDS 2 PATHWAY PRODUCT ACTIVATION, ALLOSTERY, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR G.M.COCKRELL,Y.ZHENG,W.GUO,A.W.PETERSON,E.R.KANTROWITZ REVDAT 3 20-SEP-23 4KGZ 1 REMARK LINK REVDAT 2 15-NOV-17 4KGZ 1 REMARK REVDAT 1 27-NOV-13 4KGZ 0 JRNL AUTH G.M.COCKRELL,Y.ZHENG,W.GUO,A.W.PETERSON,J.K.TRUONG, JRNL AUTH 2 E.R.KANTROWITZ JRNL TITL NEW PARADIGM FOR ALLOSTERIC REGULATION OF ESCHERICHIA COLI JRNL TITL 2 ASPARTATE TRANSCARBAMOYLASE. JRNL REF BIOCHEMISTRY V. 52 8036 2013 JRNL REFN ISSN 0006-2960 JRNL PMID 24138583 JRNL DOI 10.1021/BI401205N REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.78 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 52382 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2671 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.7897 - 6.3926 1.00 2798 147 0.1564 0.1523 REMARK 3 2 6.3926 - 5.0756 1.00 2675 168 0.1725 0.2345 REMARK 3 3 5.0756 - 4.4345 1.00 2644 150 0.1353 0.1583 REMARK 3 4 4.4345 - 4.0292 1.00 2632 145 0.1393 0.1695 REMARK 3 5 4.0292 - 3.7405 1.00 2633 127 0.1521 0.1818 REMARK 3 6 3.7405 - 3.5200 1.00 2633 127 0.1594 0.2103 REMARK 3 7 3.5200 - 3.3438 1.00 2607 137 0.1749 0.2176 REMARK 3 8 3.3438 - 3.1983 1.00 2636 124 0.1841 0.2251 REMARK 3 9 3.1983 - 3.0752 1.00 2601 124 0.1788 0.2144 REMARK 3 10 3.0752 - 2.9691 1.00 2593 151 0.1820 0.2618 REMARK 3 11 2.9691 - 2.8762 1.00 2599 143 0.1894 0.2542 REMARK 3 12 2.8762 - 2.7940 1.00 2606 135 0.1837 0.2659 REMARK 3 13 2.7940 - 2.7205 1.00 2584 133 0.1771 0.2332 REMARK 3 14 2.7205 - 2.6541 1.00 2573 162 0.1802 0.2338 REMARK 3 15 2.6541 - 2.5938 1.00 2597 131 0.1890 0.2683 REMARK 3 16 2.5938 - 2.5386 1.00 2562 164 0.1894 0.2728 REMARK 3 17 2.5386 - 2.4878 1.00 2582 131 0.1915 0.2283 REMARK 3 18 2.4878 - 2.4409 1.00 2564 147 0.2096 0.2823 REMARK 3 19 2.4409 - 2.4000 1.00 2592 125 0.2309 0.3169 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.360 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 7370 REMARK 3 ANGLE : 1.068 10036 REMARK 3 CHIRALITY : 0.071 1153 REMARK 3 PLANARITY : 0.005 1281 REMARK 3 DIHEDRAL : 14.520 2769 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 24 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.2752 37.8237 1.0381 REMARK 3 T TENSOR REMARK 3 T11: 0.2951 T22: 0.3836 REMARK 3 T33: 0.2571 T12: 0.0278 REMARK 3 T13: -0.1363 T23: 0.1467 REMARK 3 L TENSOR REMARK 3 L11: 0.2805 L22: 0.2672 REMARK 3 L33: 0.1920 L12: -0.0799 REMARK 3 L13: -0.2446 L23: 0.1198 REMARK 3 S TENSOR REMARK 3 S11: 0.1242 S12: 0.2547 S13: 0.2094 REMARK 3 S21: -0.3486 S22: 0.0496 S23: 0.1962 REMARK 3 S31: -0.0356 S32: -0.0942 S33: 0.4184 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 54 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.1035 42.9279 12.1800 REMARK 3 T TENSOR REMARK 3 T11: 0.2008 T22: 0.2311 REMARK 3 T33: 0.2476 T12: 0.0339 REMARK 3 T13: 0.0133 T23: 0.0621 REMARK 3 L TENSOR REMARK 3 L11: 0.3433 L22: 0.2106 REMARK 3 L33: 0.1561 L12: -0.0101 REMARK 3 L13: -0.1104 L23: 0.0331 REMARK 3 S TENSOR REMARK 3 S11: 0.0953 S12: -0.0105 S13: 0.0679 REMARK 3 S21: -0.0957 S22: 0.0466 S23: 0.1495 REMARK 3 S31: -0.0162 S32: -0.0257 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 135 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.4128 26.7487 10.4609 REMARK 3 T TENSOR REMARK 3 T11: 0.1830 T22: 0.3553 REMARK 3 T33: 0.4982 T12: -0.0605 REMARK 3 T13: -0.1310 T23: 0.1336 REMARK 3 L TENSOR REMARK 3 L11: 0.1605 L22: 0.1694 REMARK 3 L33: 0.3425 L12: 0.1351 REMARK 3 L13: -0.0260 L23: 0.0462 REMARK 3 S TENSOR REMARK 3 S11: 0.0003 S12: -0.0535 S13: -0.3288 REMARK 3 S21: -0.0270 S22: 0.1316 S23: 0.3314 REMARK 3 S31: -0.0063 S32: -0.0912 S33: 0.2560 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 167 THROUGH 195 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.2664 30.5545 16.9728 REMARK 3 T TENSOR REMARK 3 T11: 0.0936 T22: 0.4349 REMARK 3 T33: 0.6606 T12: 0.0054 REMARK 3 T13: -0.0439 T23: 0.2443 REMARK 3 L TENSOR REMARK 3 L11: 0.0468 L22: 0.4181 REMARK 3 L33: 0.0352 L12: -0.0122 REMARK 3 L13: 0.0040 L23: -0.0557 REMARK 3 S TENSOR REMARK 3 S11: -0.0384 S12: -0.0305 S13: -0.0829 REMARK 3 S21: -0.0202 S22: 0.2294 S23: 0.7212 REMARK 3 S31: 0.0901 S32: -0.1508 S33: 0.0541 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 196 THROUGH 219 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.6428 29.1114 19.6901 REMARK 3 T TENSOR REMARK 3 T11: 0.1346 T22: 0.5566 REMARK 3 T33: 0.9972 T12: -0.0304 REMARK 3 T13: 0.1417 T23: 0.3538 REMARK 3 L TENSOR REMARK 3 L11: 0.2848 L22: 0.0933 REMARK 3 L33: 0.1585 L12: 0.1671 REMARK 3 L13: 0.1333 L23: 0.0988 REMARK 3 S TENSOR REMARK 3 S11: -0.0870 S12: -0.2118 S13: -0.2900 REMARK 3 S21: 0.0476 S22: -0.2125 S23: 0.1799 REMARK 3 S31: 0.0780 S32: -0.2967 S33: -0.3708 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 220 THROUGH 236 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.0041 25.6383 21.5574 REMARK 3 T TENSOR REMARK 3 T11: 0.1668 T22: 0.3589 REMARK 3 T33: 0.5617 T12: 0.0364 REMARK 3 T13: 0.0022 T23: 0.1407 REMARK 3 L TENSOR REMARK 3 L11: 0.2038 L22: 0.2078 REMARK 3 L33: 0.8377 L12: 0.1780 REMARK 3 L13: -0.3996 L23: -0.4080 REMARK 3 S TENSOR REMARK 3 S11: 0.0610 S12: -0.2608 S13: -0.2692 REMARK 3 S21: 0.1593 S22: -0.0425 S23: 0.5773 REMARK 3 S31: -0.0880 S32: 0.2260 S33: 0.1092 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 237 THROUGH 261 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.9649 17.7652 24.3782 REMARK 3 T TENSOR REMARK 3 T11: 0.3007 T22: 0.4723 REMARK 3 T33: 0.7530 T12: -0.1187 REMARK 3 T13: 0.0303 T23: 0.2582 REMARK 3 L TENSOR REMARK 3 L11: 0.1750 L22: 0.5301 REMARK 3 L33: 0.1702 L12: 0.1456 REMARK 3 L13: -0.0212 L23: -0.2749 REMARK 3 S TENSOR REMARK 3 S11: -0.0873 S12: -0.4459 S13: -0.5348 REMARK 3 S21: 0.3694 S22: 0.1298 S23: 0.4080 REMARK 3 S31: -0.1472 S32: -0.2302 S33: 0.0320 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 262 THROUGH 284 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.0047 15.8083 16.2035 REMARK 3 T TENSOR REMARK 3 T11: 0.3391 T22: 0.2738 REMARK 3 T33: 0.7119 T12: -0.0606 REMARK 3 T13: -0.1084 T23: 0.1675 REMARK 3 L TENSOR REMARK 3 L11: 0.1450 L22: 0.0390 REMARK 3 L33: 0.1543 L12: 0.0479 REMARK 3 L13: 0.0032 L23: 0.0534 REMARK 3 S TENSOR REMARK 3 S11: 0.0797 S12: -0.0452 S13: -0.4506 REMARK 3 S21: -0.0383 S22: 0.0876 S23: 0.3615 REMARK 3 S31: 0.3119 S32: 0.0095 S33: 0.0606 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 285 THROUGH 310 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.7223 31.8745 -0.0150 REMARK 3 T TENSOR REMARK 3 T11: -0.0732 T22: 0.2606 REMARK 3 T33: 0.1789 T12: 0.0071 REMARK 3 T13: -0.4321 T23: 0.0062 REMARK 3 L TENSOR REMARK 3 L11: 0.3131 L22: 0.4894 REMARK 3 L33: 0.0169 L12: 0.1182 REMARK 3 L13: -0.0708 L23: 0.0176 REMARK 3 S TENSOR REMARK 3 S11: 0.1133 S12: 0.2762 S13: -0.2309 REMARK 3 S21: -0.3367 S22: -0.0087 S23: 0.2000 REMARK 3 S31: -0.0281 S32: 0.0225 S33: 0.0026 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 10 THROUGH 19 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.3340 81.6965 26.6599 REMARK 3 T TENSOR REMARK 3 T11: 0.3447 T22: 0.4866 REMARK 3 T33: 0.6294 T12: 0.3286 REMARK 3 T13: 0.0092 T23: -0.0411 REMARK 3 L TENSOR REMARK 3 L11: 0.1811 L22: 0.1249 REMARK 3 L33: 0.0580 L12: -0.1370 REMARK 3 L13: 0.0757 L23: -0.0314 REMARK 3 S TENSOR REMARK 3 S11: -0.1067 S12: 0.0337 S13: -0.1214 REMARK 3 S21: -0.0066 S22: -0.1796 S23: 0.1345 REMARK 3 S31: -0.0877 S32: -0.0962 S33: -0.0933 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 20 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.3652 73.1006 32.2954 REMARK 3 T TENSOR REMARK 3 T11: 0.5824 T22: 0.5436 REMARK 3 T33: 0.5126 T12: 0.2519 REMARK 3 T13: 0.0083 T23: -0.1758 REMARK 3 L TENSOR REMARK 3 L11: 0.1023 L22: 0.1209 REMARK 3 L33: 0.2269 L12: -0.0032 REMARK 3 L13: 0.0823 L23: -0.1090 REMARK 3 S TENSOR REMARK 3 S11: 0.0191 S12: 0.1152 S13: 0.0887 REMARK 3 S21: 0.0491 S22: -0.2288 S23: 0.2287 REMARK 3 S31: -0.1418 S32: -0.1640 S33: -0.0537 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 68 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.3527 71.1569 22.5923 REMARK 3 T TENSOR REMARK 3 T11: 0.5261 T22: 0.6761 REMARK 3 T33: 0.5615 T12: 0.3085 REMARK 3 T13: -0.0686 T23: -0.1599 REMARK 3 L TENSOR REMARK 3 L11: 0.2190 L22: 0.2375 REMARK 3 L33: 0.3871 L12: -0.1189 REMARK 3 L13: -0.0381 L23: -0.2273 REMARK 3 S TENSOR REMARK 3 S11: -0.0922 S12: 0.1451 S13: 0.0548 REMARK 3 S21: -0.2091 S22: -0.1297 S23: -0.0052 REMARK 3 S31: 0.0075 S32: -0.3868 S33: -0.0555 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 90 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.7597 61.0282 22.3535 REMARK 3 T TENSOR REMARK 3 T11: 0.3051 T22: 0.5157 REMARK 3 T33: 0.6843 T12: 0.1598 REMARK 3 T13: -0.0485 T23: -0.0967 REMARK 3 L TENSOR REMARK 3 L11: 0.1128 L22: 0.1628 REMARK 3 L33: 0.3622 L12: -0.0418 REMARK 3 L13: -0.1903 L23: 0.0489 REMARK 3 S TENSOR REMARK 3 S11: -0.1271 S12: -0.0885 S13: 0.1863 REMARK 3 S21: -0.2588 S22: -0.2517 S23: 0.1599 REMARK 3 S31: 0.1387 S32: -0.1904 S33: -0.0354 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 115 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.1032 50.8958 24.3171 REMARK 3 T TENSOR REMARK 3 T11: 0.1474 T22: 0.5089 REMARK 3 T33: 0.4783 T12: 0.0231 REMARK 3 T13: 0.0579 T23: -0.0258 REMARK 3 L TENSOR REMARK 3 L11: 0.0210 L22: 0.1114 REMARK 3 L33: 0.0616 L12: 0.0184 REMARK 3 L13: 0.0099 L23: 0.0412 REMARK 3 S TENSOR REMARK 3 S11: -0.0774 S12: -0.3332 S13: 0.1258 REMARK 3 S21: 0.1123 S22: -0.1094 S23: -0.0011 REMARK 3 S31: 0.2650 S32: -0.2876 S33: -0.0024 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): 59.7074 61.0822 79.2995 REMARK 3 T TENSOR REMARK 3 T11: 0.4977 T22: 0.4931 REMARK 3 T33: 0.3363 T12: 0.0096 REMARK 3 T13: 0.0727 T23: -0.1078 REMARK 3 L TENSOR REMARK 3 L11: 0.0780 L22: 0.0663 REMARK 3 L33: 0.0252 L12: 0.0660 REMARK 3 L13: 0.0189 L23: 0.0084 REMARK 3 S TENSOR REMARK 3 S11: 0.1871 S12: -0.3691 S13: 0.3208 REMARK 3 S21: 0.3314 S22: 0.0029 S23: 0.1631 REMARK 3 S31: -0.3442 S32: -0.2233 S33: 0.0059 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 33 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): 60.6578 43.7459 73.7064 REMARK 3 T TENSOR REMARK 3 T11: 0.3851 T22: 0.3794 REMARK 3 T33: 0.1935 T12: 0.0068 REMARK 3 T13: 0.0235 T23: -0.0090 REMARK 3 L TENSOR REMARK 3 L11: 0.0829 L22: 0.0802 REMARK 3 L33: 0.0142 L12: -0.0445 REMARK 3 L13: 0.0154 L23: 0.0217 REMARK 3 S TENSOR REMARK 3 S11: 0.0628 S12: -0.0302 S13: -0.1992 REMARK 3 S21: 0.0761 S22: 0.0258 S23: -0.1111 REMARK 3 S31: 0.1577 S32: -0.1214 S33: -0.0001 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 80 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): 58.5069 55.3409 66.8453 REMARK 3 T TENSOR REMARK 3 T11: 0.4082 T22: 0.3730 REMARK 3 T33: 0.2409 T12: -0.0230 REMARK 3 T13: 0.0295 T23: -0.0128 REMARK 3 L TENSOR REMARK 3 L11: 0.1409 L22: 0.3236 REMARK 3 L33: 0.1285 L12: -0.2189 REMARK 3 L13: 0.0944 L23: -0.1434 REMARK 3 S TENSOR REMARK 3 S11: -0.0389 S12: -0.0660 S13: 0.2685 REMARK 3 S21: -0.0279 S22: 0.0048 S23: 0.0650 REMARK 3 S31: -0.2805 S32: -0.0799 S33: 0.0000 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 167 THROUGH 187 ) REMARK 3 ORIGIN FOR THE GROUP (A): 68.4270 69.4195 66.0030 REMARK 3 T TENSOR REMARK 3 T11: 0.5725 T22: 0.4193 REMARK 3 T33: 0.4752 T12: -0.0675 REMARK 3 T13: 0.0375 T23: -0.0007 REMARK 3 L TENSOR REMARK 3 L11: 0.0368 L22: 0.0073 REMARK 3 L33: 0.0050 L12: 0.0231 REMARK 3 L13: -0.0178 L23: -0.0061 REMARK 3 S TENSOR REMARK 3 S11: 0.2122 S12: 0.0886 S13: 0.6314 REMARK 3 S21: 0.0054 S22: -0.0263 S23: -0.0278 REMARK 3 S31: -0.3491 S32: 0.0645 S33: -0.0000 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 188 THROUGH 218 ) REMARK 3 ORIGIN FOR THE GROUP (A): 69.4693 73.0640 57.9289 REMARK 3 T TENSOR REMARK 3 T11: 0.7375 T22: 0.4988 REMARK 3 T33: 0.6075 T12: -0.0268 REMARK 3 T13: 0.0637 T23: 0.1218 REMARK 3 L TENSOR REMARK 3 L11: 0.0156 L22: 0.0477 REMARK 3 L33: 0.0243 L12: 0.0200 REMARK 3 L13: -0.0080 L23: -0.0360 REMARK 3 S TENSOR REMARK 3 S11: -0.1861 S12: 0.1345 S13: 0.4840 REMARK 3 S21: -0.5112 S22: 0.2142 S23: 0.0942 REMARK 3 S31: -0.4649 S32: 0.1728 S33: 0.0002 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 219 THROUGH 236 ) REMARK 3 ORIGIN FOR THE GROUP (A): 73.4331 61.2549 58.2726 REMARK 3 T TENSOR REMARK 3 T11: 0.5779 T22: 0.4849 REMARK 3 T33: 0.4169 T12: -0.0569 REMARK 3 T13: 0.0872 T23: -0.0063 REMARK 3 L TENSOR REMARK 3 L11: 0.0217 L22: 0.0094 REMARK 3 L33: 0.0377 L12: 0.0143 REMARK 3 L13: -0.0302 L23: -0.0162 REMARK 3 S TENSOR REMARK 3 S11: 0.1754 S12: 0.1462 S13: 0.2566 REMARK 3 S21: -0.1617 S22: 0.0328 S23: -0.1422 REMARK 3 S31: -0.0663 S32: 0.0378 S33: 0.0001 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 237 THROUGH 261 ) REMARK 3 ORIGIN FOR THE GROUP (A): 80.6575 62.1176 55.1648 REMARK 3 T TENSOR REMARK 3 T11: 0.6305 T22: 0.7807 REMARK 3 T33: 0.5335 T12: -0.1475 REMARK 3 T13: 0.1696 T23: -0.0334 REMARK 3 L TENSOR REMARK 3 L11: 0.3285 L22: 0.7710 REMARK 3 L33: 0.1183 L12: -0.3608 REMARK 3 L13: -0.0095 L23: 0.1990 REMARK 3 S TENSOR REMARK 3 S11: 0.0887 S12: 0.2655 S13: 0.5141 REMARK 3 S21: -0.3474 S22: 0.1412 S23: -0.5125 REMARK 3 S31: 0.1649 S32: -0.0296 S33: -0.0106 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 262 THROUGH 310 ) REMARK 3 ORIGIN FOR THE GROUP (A): 73.3944 54.6487 71.7700 REMARK 3 T TENSOR REMARK 3 T11: 0.4283 T22: 0.3831 REMARK 3 T33: 0.3583 T12: -0.0118 REMARK 3 T13: 0.0562 T23: -0.0571 REMARK 3 L TENSOR REMARK 3 L11: 0.0911 L22: 0.0752 REMARK 3 L33: 0.1770 L12: -0.0584 REMARK 3 L13: 0.1398 L23: -0.0486 REMARK 3 S TENSOR REMARK 3 S11: 0.0094 S12: -0.1118 S13: 0.0863 REMARK 3 S21: 0.1381 S22: 0.0031 S23: -0.2051 REMARK 3 S31: -0.1337 S32: 0.0481 S33: -0.0001 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 11 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.2967 78.6792 47.2052 REMARK 3 T TENSOR REMARK 3 T11: 0.8250 T22: 0.5666 REMARK 3 T33: 0.4217 T12: 0.2567 REMARK 3 T13: 0.0013 T23: -0.0654 REMARK 3 L TENSOR REMARK 3 L11: 0.1372 L22: 0.1746 REMARK 3 L33: 0.1500 L12: 0.0149 REMARK 3 L13: 0.0940 L23: 0.1169 REMARK 3 S TENSOR REMARK 3 S11: -0.2807 S12: -0.1473 S13: -0.0300 REMARK 3 S21: 0.7786 S22: 0.0915 S23: 0.0104 REMARK 3 S31: 0.1781 S32: 0.0354 S33: -0.0009 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 88 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.3806 70.8629 55.1242 REMARK 3 T TENSOR REMARK 3 T11: 0.8514 T22: 0.3928 REMARK 3 T33: 0.3685 T12: 0.1139 REMARK 3 T13: -0.2892 T23: 0.0143 REMARK 3 L TENSOR REMARK 3 L11: 1.6152 L22: 0.5497 REMARK 3 L33: 0.6053 L12: 0.2209 REMARK 3 L13: -0.9657 L23: -0.2320 REMARK 3 S TENSOR REMARK 3 S11: -0.2009 S12: 0.1018 S13: -0.0087 REMARK 3 S21: 0.0045 S22: -0.3604 S23: -0.1834 REMARK 3 S31: -0.6181 S32: -0.0041 S33: -0.5211 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4KGZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000079326. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JAN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.075 REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK DOUBLE CRYSTAL REMARK 200 SAGITTAL FOCUSING MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52389 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 24.10 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 21.20 REMARK 200 R MERGE FOR SHELL (I) : 0.68300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 1D09 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM MALEIC ACID, 1 MM PALA, 3 MM REMARK 280 SODIUM AZIDE, PH 5.9, MICRODIALYSIS, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 39500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 99510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -196.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 121.37800 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 60.68900 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 105.11643 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C 586 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 HIS B 3 REMARK 465 ASP B 4 REMARK 465 ASN B 5 REMARK 465 LYS B 6 REMARK 465 LEU B 7 REMARK 465 GLN B 8 REMARK 465 VAL B 9 REMARK 465 MET D 1 REMARK 465 THR D 2 REMARK 465 HIS D 3 REMARK 465 ASP D 4 REMARK 465 ASN D 5 REMARK 465 LYS D 6 REMARK 465 LEU D 7 REMARK 465 GLN D 8 REMARK 465 VAL D 9 REMARK 465 GLU D 10 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 276 O HOH A 632 2.02 REMARK 500 OE2 GLU A 216 ND2 ASN A 256 2.03 REMARK 500 NZ LYS D 137 O HOH D 324 2.17 REMARK 500 OD1 ASP D 72 O HOH D 321 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 N ALA A 1 OE1 GLU B 101 4555 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 35 77.86 -116.28 REMARK 500 ASN A 132 -91.00 -81.35 REMARK 500 LEU A 267 159.74 66.34 REMARK 500 VAL A 270 -92.78 -100.45 REMARK 500 TRP A 284 16.73 -144.69 REMARK 500 SER B 50 -53.91 -129.02 REMARK 500 ASN B 105 -51.10 70.22 REMARK 500 ALA B 131 -128.88 49.02 REMARK 500 GLN C 35 77.45 -118.70 REMARK 500 ASN C 132 -85.15 -83.02 REMARK 500 LEU C 267 158.16 72.83 REMARK 500 VAL C 270 -88.97 -101.87 REMARK 500 TRP C 284 16.76 -153.27 REMARK 500 TYR D 89 22.74 48.08 REMARK 500 ASN D 105 -43.35 74.52 REMARK 500 LYS D 129 152.73 96.09 REMARK 500 ARG D 130 -111.67 -117.41 REMARK 500 ALA D 131 -80.70 49.03 REMARK 500 ASN D 132 -100.05 -127.75 REMARK 500 TYR D 140 -61.75 -90.63 REMARK 500 GLU D 142 -3.88 68.47 REMARK 500 HIS D 147 -8.59 -59.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 109 SG REMARK 620 2 CYS B 114 SG 114.8 REMARK 620 3 CYS B 138 SG 114.1 106.1 REMARK 620 4 CYS B 141 SG 102.1 113.5 106.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 204 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 UTP B 202 O2B REMARK 620 2 UTP B 203 O1B 88.2 REMARK 620 3 UTP B 203 O2G 150.3 78.1 REMARK 620 4 HOH B 301 O 99.6 98.3 108.3 REMARK 620 5 HOH B 302 O 77.1 79.4 74.5 176.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 109 SG REMARK 620 2 CYS D 114 SG 121.7 REMARK 620 3 CYS D 138 SG 110.1 106.3 REMARK 620 4 CYS D 141 SG 98.6 116.0 102.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 204 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 UTP D 202 O2G REMARK 620 2 UTP D 202 O2B 89.0 REMARK 620 3 UTP D 203 O1G 95.1 170.0 REMARK 620 4 UTP D 203 O1B 159.3 99.6 73.6 REMARK 620 5 HOH D 301 O 104.3 89.3 98.4 94.6 REMARK 620 6 HOH D 302 O 76.5 88.4 83.7 85.0 177.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PAL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UTP B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UTP B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PAL C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UTP D 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UTP D 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 204 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4KGV RELATED DB: PDB REMARK 900 RELATED ID: 4KGX RELATED DB: PDB REMARK 900 RELATED ID: 4KH0 RELATED DB: PDB REMARK 900 RELATED ID: 4KH1 RELATED DB: PDB DBREF 4KGZ A 1 310 UNP E8Y328 E8Y328_ECOKO 2 311 DBREF 4KGZ B 1 153 UNP E8Y329 E8Y329_ECOKO 1 153 DBREF 4KGZ C 1 310 UNP E8Y328 E8Y328_ECOKO 2 311 DBREF 4KGZ D 1 153 UNP E8Y329 E8Y329_ECOKO 1 153 SEQRES 1 A 310 ALA ASN PRO LEU TYR GLN LYS HIS ILE ILE SER ILE ASN SEQRES 2 A 310 ASP LEU SER ARG ASP ASP LEU ASN LEU VAL LEU ALA THR SEQRES 3 A 310 ALA ALA LYS LEU LYS ALA ASN PRO GLN PRO GLU LEU LEU SEQRES 4 A 310 LYS HIS LYS VAL ILE ALA SER CYS PHE PHE GLU ALA SER SEQRES 5 A 310 THR ARG THR ARG LEU SER PHE GLU THR SER MET HIS ARG SEQRES 6 A 310 LEU GLY ALA SER VAL VAL GLY PHE SER ASP SER ALA ASN SEQRES 7 A 310 THR SER LEU GLY LYS LYS GLY GLU THR LEU ALA ASP THR SEQRES 8 A 310 ILE SER VAL ILE SER THR TYR VAL ASP ALA ILE VAL MET SEQRES 9 A 310 ARG HIS PRO GLN GLU GLY ALA ALA ARG LEU ALA THR GLU SEQRES 10 A 310 PHE SER GLY ASN VAL PRO VAL LEU ASN ALA GLY ASP GLY SEQRES 11 A 310 SER ASN GLN HIS PRO THR GLN THR LEU LEU ASP LEU PHE SEQRES 12 A 310 THR ILE GLN GLU THR GLN GLY ARG LEU ASP ASN LEU HIS SEQRES 13 A 310 VAL ALA MET VAL GLY ASP LEU LYS TYR GLY ARG THR VAL SEQRES 14 A 310 HIS SER LEU THR GLN ALA LEU ALA LYS PHE ASP GLY ASN SEQRES 15 A 310 ARG PHE TYR PHE ILE ALA PRO ASP ALA LEU ALA MET PRO SEQRES 16 A 310 GLN TYR ILE LEU ASP MET LEU ASP GLU LYS GLY ILE ALA SEQRES 17 A 310 TRP SER LEU HIS SER SER ILE GLU GLU VAL MET ALA GLU SEQRES 18 A 310 VAL ASP ILE LEU TYR MET THR ARG VAL GLN LYS GLU ARG SEQRES 19 A 310 LEU ASP PRO SER GLU TYR ALA ASN VAL LYS ALA GLN PHE SEQRES 20 A 310 VAL LEU ARG ALA SER ASP LEU HIS ASN ALA LYS ALA ASN SEQRES 21 A 310 MET LYS VAL LEU HIS PRO LEU PRO ARG VAL ASP GLU ILE SEQRES 22 A 310 ALA THR ASP VAL ASP LYS THR PRO HIS ALA TRP TYR PHE SEQRES 23 A 310 GLN GLN ALA GLY ASN GLY ILE PHE ALA ARG GLN ALA LEU SEQRES 24 A 310 LEU ALA LEU VAL LEU ASN ARG ASP LEU VAL LEU SEQRES 1 B 153 MET THR HIS ASP ASN LYS LEU GLN VAL GLU ALA ILE LYS SEQRES 2 B 153 ARG GLY THR VAL ILE ASP HIS ILE PRO ALA GLN ILE GLY SEQRES 3 B 153 PHE LYS LEU LEU SER LEU PHE LYS LEU THR GLU THR ASP SEQRES 4 B 153 GLN ARG ILE THR ILE GLY LEU ASN LEU PRO SER GLY GLU SEQRES 5 B 153 MET GLY ARG LYS ASP LEU ILE LYS ILE GLU ASN THR PHE SEQRES 6 B 153 LEU SER GLU ASP GLN VAL ASP GLN LEU ALA LEU TYR ALA SEQRES 7 B 153 PRO GLN ALA THR VAL ASN ARG ILE ASP ASN TYR GLU VAL SEQRES 8 B 153 VAL GLY LYS SER ARG PRO SER LEU PRO GLU ARG ILE ASP SEQRES 9 B 153 ASN VAL LEU VAL CYS PRO ASN SER ASN CYS ILE SER HIS SEQRES 10 B 153 ALA GLU PRO VAL SER SER SER PHE ALA VAL ARG LYS ARG SEQRES 11 B 153 ALA ASN ASP ILE ALA LEU LYS CYS LYS TYR CYS GLU LYS SEQRES 12 B 153 GLU PHE SER HIS ASN VAL VAL LEU ALA ASN SEQRES 1 C 310 ALA ASN PRO LEU TYR GLN LYS HIS ILE ILE SER ILE ASN SEQRES 2 C 310 ASP LEU SER ARG ASP ASP LEU ASN LEU VAL LEU ALA THR SEQRES 3 C 310 ALA ALA LYS LEU LYS ALA ASN PRO GLN PRO GLU LEU LEU SEQRES 4 C 310 LYS HIS LYS VAL ILE ALA SER CYS PHE PHE GLU ALA SER SEQRES 5 C 310 THR ARG THR ARG LEU SER PHE GLU THR SER MET HIS ARG SEQRES 6 C 310 LEU GLY ALA SER VAL VAL GLY PHE SER ASP SER ALA ASN SEQRES 7 C 310 THR SER LEU GLY LYS LYS GLY GLU THR LEU ALA ASP THR SEQRES 8 C 310 ILE SER VAL ILE SER THR TYR VAL ASP ALA ILE VAL MET SEQRES 9 C 310 ARG HIS PRO GLN GLU GLY ALA ALA ARG LEU ALA THR GLU SEQRES 10 C 310 PHE SER GLY ASN VAL PRO VAL LEU ASN ALA GLY ASP GLY SEQRES 11 C 310 SER ASN GLN HIS PRO THR GLN THR LEU LEU ASP LEU PHE SEQRES 12 C 310 THR ILE GLN GLU THR GLN GLY ARG LEU ASP ASN LEU HIS SEQRES 13 C 310 VAL ALA MET VAL GLY ASP LEU LYS TYR GLY ARG THR VAL SEQRES 14 C 310 HIS SER LEU THR GLN ALA LEU ALA LYS PHE ASP GLY ASN SEQRES 15 C 310 ARG PHE TYR PHE ILE ALA PRO ASP ALA LEU ALA MET PRO SEQRES 16 C 310 GLN TYR ILE LEU ASP MET LEU ASP GLU LYS GLY ILE ALA SEQRES 17 C 310 TRP SER LEU HIS SER SER ILE GLU GLU VAL MET ALA GLU SEQRES 18 C 310 VAL ASP ILE LEU TYR MET THR ARG VAL GLN LYS GLU ARG SEQRES 19 C 310 LEU ASP PRO SER GLU TYR ALA ASN VAL LYS ALA GLN PHE SEQRES 20 C 310 VAL LEU ARG ALA SER ASP LEU HIS ASN ALA LYS ALA ASN SEQRES 21 C 310 MET LYS VAL LEU HIS PRO LEU PRO ARG VAL ASP GLU ILE SEQRES 22 C 310 ALA THR ASP VAL ASP LYS THR PRO HIS ALA TRP TYR PHE SEQRES 23 C 310 GLN GLN ALA GLY ASN GLY ILE PHE ALA ARG GLN ALA LEU SEQRES 24 C 310 LEU ALA LEU VAL LEU ASN ARG ASP LEU VAL LEU SEQRES 1 D 153 MET THR HIS ASP ASN LYS LEU GLN VAL GLU ALA ILE LYS SEQRES 2 D 153 ARG GLY THR VAL ILE ASP HIS ILE PRO ALA GLN ILE GLY SEQRES 3 D 153 PHE LYS LEU LEU SER LEU PHE LYS LEU THR GLU THR ASP SEQRES 4 D 153 GLN ARG ILE THR ILE GLY LEU ASN LEU PRO SER GLY GLU SEQRES 5 D 153 MET GLY ARG LYS ASP LEU ILE LYS ILE GLU ASN THR PHE SEQRES 6 D 153 LEU SER GLU ASP GLN VAL ASP GLN LEU ALA LEU TYR ALA SEQRES 7 D 153 PRO GLN ALA THR VAL ASN ARG ILE ASP ASN TYR GLU VAL SEQRES 8 D 153 VAL GLY LYS SER ARG PRO SER LEU PRO GLU ARG ILE ASP SEQRES 9 D 153 ASN VAL LEU VAL CYS PRO ASN SER ASN CYS ILE SER HIS SEQRES 10 D 153 ALA GLU PRO VAL SER SER SER PHE ALA VAL ARG LYS ARG SEQRES 11 D 153 ALA ASN ASP ILE ALA LEU LYS CYS LYS TYR CYS GLU LYS SEQRES 12 D 153 GLU PHE SER HIS ASN VAL VAL LEU ALA ASN HET PAL A 401 16 HET ZN B 201 1 HET UTP B 202 29 HET UTP B 203 29 HET MG B 204 1 HET PAL C 401 16 HET ZN D 201 1 HET UTP D 202 29 HET UTP D 203 29 HET MG D 204 1 HETNAM PAL N-(PHOSPHONACETYL)-L-ASPARTIC ACID HETNAM ZN ZINC ION HETNAM UTP URIDINE 5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 5 PAL 2(C6 H10 N O8 P) FORMUL 6 ZN 2(ZN 2+) FORMUL 7 UTP 4(C9 H15 N2 O15 P3) FORMUL 9 MG 2(MG 2+) FORMUL 15 HOH *339(H2 O) HELIX 1 1 SER A 11 LEU A 15 5 5 HELIX 2 2 SER A 16 ASN A 33 1 18 HELIX 3 3 THR A 53 LEU A 66 1 14 HELIX 4 4 ASP A 75 ASN A 78 5 4 HELIX 5 5 THR A 79 LYS A 84 1 6 HELIX 6 6 THR A 87 SER A 96 1 10 HELIX 7 7 GLY A 110 GLU A 117 1 8 HELIX 8 8 HIS A 134 GLY A 150 1 17 HELIX 9 9 GLY A 166 ALA A 177 1 12 HELIX 10 10 PRO A 189 ALA A 193 5 5 HELIX 11 11 PRO A 195 LYS A 205 1 11 HELIX 12 12 SER A 214 ALA A 220 1 7 HELIX 13 13 ASP A 236 VAL A 243 5 8 HELIX 14 14 ARG A 250 HIS A 255 5 6 HELIX 15 15 ALA A 274 ASP A 278 5 5 HELIX 16 16 TRP A 284 ASN A 305 1 22 HELIX 17 17 ILE B 25 PHE B 33 1 9 HELIX 18 18 SER B 67 LEU B 74 1 8 HELIX 19 19 ALA B 75 TYR B 77 5 3 HELIX 20 20 ASN B 148 VAL B 150 5 3 HELIX 21 21 SER C 11 LEU C 15 5 5 HELIX 22 22 SER C 16 ASN C 33 1 18 HELIX 23 23 THR C 53 LEU C 66 1 14 HELIX 24 24 ASP C 75 ASN C 78 5 4 HELIX 25 25 THR C 79 LYS C 84 1 6 HELIX 26 26 THR C 87 SER C 96 1 10 HELIX 27 27 GLY C 110 GLU C 117 1 8 HELIX 28 28 HIS C 134 GLY C 150 1 17 HELIX 29 29 GLY C 166 ALA C 177 1 12 HELIX 30 30 PRO C 189 ALA C 193 5 5 HELIX 31 31 PRO C 195 LYS C 205 1 11 HELIX 32 32 GLN C 231 LEU C 235 5 5 HELIX 33 33 ASP C 236 VAL C 243 5 8 HELIX 34 34 ARG C 250 HIS C 255 5 6 HELIX 35 35 ALA C 274 ASP C 278 5 5 HELIX 36 36 TRP C 284 ASN C 291 1 8 HELIX 37 37 ASN C 291 ASN C 305 1 15 HELIX 38 38 ILE D 25 PHE D 33 1 9 HELIX 39 39 SER D 67 ALA D 78 1 12 HELIX 40 40 CYS D 114 ALA D 118 5 5 HELIX 41 41 HIS D 147 LEU D 151 1 5 SHEET 1 A 4 SER A 69 PHE A 73 0 SHEET 2 A 4 VAL A 43 PHE A 48 1 N SER A 46 O VAL A 71 SHEET 3 A 4 ALA A 101 HIS A 106 1 O VAL A 103 N CYS A 47 SHEET 4 A 4 VAL A 124 ASP A 129 1 O ALA A 127 N MET A 104 SHEET 1 B 5 ALA A 208 LEU A 211 0 SHEET 2 B 5 ARG A 183 ILE A 187 1 N PHE A 186 O SER A 210 SHEET 3 B 5 HIS A 156 VAL A 160 1 N VAL A 157 O ARG A 183 SHEET 4 B 5 ILE A 224 MET A 227 1 O TYR A 226 N ALA A 158 SHEET 5 B 5 LYS A 262 LEU A 264 1 O LEU A 264 N MET A 227 SHEET 1 C10 GLU B 90 SER B 95 0 SHEET 2 C10 THR B 82 ASP B 87 -1 N VAL B 83 O SER B 95 SHEET 3 C10 GLY B 15 PRO B 22 -1 N GLY B 15 O ILE B 86 SHEET 4 C10 ARG B 55 GLU B 62 -1 O ASP B 57 N ILE B 21 SHEET 5 C10 ILE B 42 PRO B 49 -1 N THR B 43 O LYS B 60 SHEET 6 C10 ILE D 42 SER D 50 -1 O ILE D 42 N LEU B 46 SHEET 7 C10 GLY D 54 GLU D 62 -1 O LYS D 60 N THR D 43 SHEET 8 C10 GLY D 15 PRO D 22 -1 N ILE D 21 O ASP D 57 SHEET 9 C10 THR D 82 ASP D 87 -1 O THR D 82 N ASP D 19 SHEET 10 C10 GLU D 90 SER D 95 -1 O VAL D 92 N ARG D 85 SHEET 1 D 4 ARG B 102 ASP B 104 0 SHEET 2 D 4 SER B 124 ARG B 130 -1 O PHE B 125 N ILE B 103 SHEET 3 D 4 ASP B 133 CYS B 138 -1 O ASP B 133 N ARG B 130 SHEET 4 D 4 GLU B 144 SER B 146 -1 O PHE B 145 N LEU B 136 SHEET 1 E 4 SER C 69 PHE C 73 0 SHEET 2 E 4 VAL C 43 PHE C 48 1 N SER C 46 O VAL C 71 SHEET 3 E 4 ALA C 101 HIS C 106 1 O VAL C 103 N CYS C 47 SHEET 4 E 4 VAL C 124 ASP C 129 1 O LEU C 125 N ILE C 102 SHEET 1 F 5 TRP C 209 LEU C 211 0 SHEET 2 F 5 ARG C 183 ILE C 187 1 N PHE C 186 O SER C 210 SHEET 3 F 5 HIS C 156 VAL C 160 1 N VAL C 157 O ARG C 183 SHEET 4 F 5 ILE C 224 MET C 227 1 O TYR C 226 N ALA C 158 SHEET 5 F 5 LYS C 262 LEU C 264 1 O LEU C 264 N MET C 227 SHEET 1 G 4 ARG D 102 ASP D 104 0 SHEET 2 G 4 SER D 124 ARG D 128 -1 O PHE D 125 N ILE D 103 SHEET 3 G 4 ALA D 135 CYS D 138 -1 O ALA D 135 N ARG D 128 SHEET 4 G 4 GLU D 144 SER D 146 -1 O PHE D 145 N LEU D 136 LINK SG CYS B 109 ZN ZN B 201 1555 1555 2.34 LINK SG CYS B 114 ZN ZN B 201 1555 1555 2.41 LINK SG CYS B 138 ZN ZN B 201 1555 1555 2.22 LINK SG CYS B 141 ZN ZN B 201 1555 1555 2.11 LINK O2B UTP B 202 MG MG B 204 1555 1555 2.15 LINK O1B UTP B 203 MG MG B 204 1555 1555 2.15 LINK O2G UTP B 203 MG MG B 204 1555 1555 2.22 LINK MG MG B 204 O HOH B 301 1555 1555 2.05 LINK MG MG B 204 O HOH B 302 1555 1555 2.07 LINK SG CYS D 109 ZN ZN D 201 1555 1555 2.35 LINK SG CYS D 114 ZN ZN D 201 1555 1555 2.23 LINK SG CYS D 138 ZN ZN D 201 1555 1555 2.27 LINK SG CYS D 141 ZN ZN D 201 1555 1555 2.29 LINK O2G UTP D 202 MG MG D 204 1555 1555 1.80 LINK O2B UTP D 202 MG MG D 204 1555 1555 2.21 LINK O1G UTP D 203 MG MG D 204 1555 1555 2.19 LINK O1B UTP D 203 MG MG D 204 1555 1555 2.19 LINK MG MG D 204 O HOH D 301 1555 1555 2.07 LINK MG MG D 204 O HOH D 302 1555 1555 2.07 CISPEP 1 LEU A 267 PRO A 268 0 -4.26 CISPEP 2 LEU C 267 PRO C 268 0 0.51 SITE 1 AC1 14 SER A 52 THR A 53 ARG A 54 THR A 55 SITE 2 AC1 14 SER A 80 LYS A 84 ARG A 105 HIS A 134 SITE 3 AC1 14 ARG A 167 ARG A 229 GLN A 231 LEU A 267 SITE 4 AC1 14 HOH A 506 HOH A 538 SITE 1 AC2 4 CYS B 109 CYS B 114 CYS B 138 CYS B 141 SITE 1 AC3 11 ALA B 11 ILE B 12 VAL B 17 HIS B 20 SITE 2 AC3 11 LYS B 60 TYR B 89 LYS B 94 UTP B 203 SITE 3 AC3 11 MG B 204 HOH B 301 HOH B 302 SITE 1 AC4 13 GLU B 10 HIS B 20 LEU B 48 PRO B 49 SITE 2 AC4 13 SER B 50 GLU B 52 LYS B 56 LYS B 60 SITE 3 AC4 13 UTP B 202 MG B 204 HOH B 301 HOH B 302 SITE 4 AC4 13 ARG D 41 SITE 1 AC5 4 UTP B 202 UTP B 203 HOH B 301 HOH B 302 SITE 1 AC6 16 SER C 52 THR C 53 ARG C 54 THR C 55 SITE 2 AC6 16 SER C 80 LYS C 84 ARG C 105 HIS C 134 SITE 3 AC6 16 ARG C 167 THR C 168 ARG C 229 GLN C 231 SITE 4 AC6 16 LEU C 267 HOH C 509 HOH C 528 HOH C 531 SITE 1 AC7 4 CYS D 109 CYS D 114 CYS D 138 CYS D 141 SITE 1 AC8 11 ALA D 11 ILE D 12 HIS D 20 LYS D 60 SITE 2 AC8 11 TYR D 89 LYS D 94 UTP D 203 MG D 204 SITE 3 AC8 11 HOH D 301 HOH D 302 HOH D 318 SITE 1 AC9 14 ARG B 41 HIS D 20 LEU D 48 PRO D 49 SITE 2 AC9 14 SER D 50 GLY D 51 GLU D 52 LYS D 56 SITE 3 AC9 14 LEU D 58 LYS D 60 UTP D 202 MG D 204 SITE 4 AC9 14 HOH D 301 HOH D 302 SITE 1 BC1 4 UTP D 202 UTP D 203 HOH D 301 HOH D 302 CRYST1 121.378 121.378 155.135 90.00 90.00 120.00 P 3 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008239 0.004757 0.000000 0.00000 SCALE2 0.000000 0.009513 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006446 0.00000