HEADER TRANSFERASE 29-APR-13 4KH0 TITLE THE R STATE STRUCTURE OF E. COLI ATCASE WITH ATP AND MAGNESIUM BOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: ASPARTATE CARBAMOYLTRANSFERASE; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: ASPARTATE TRANSCARBAMYLASE; COMPND 5 EC: 2.1.3.2; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ASPARTATE CARBAMOYLTRANSFERASE REGULATORY CHAIN; COMPND 9 CHAIN: B, D; COMPND 10 EC: 2.1.3.2; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 595495; SOURCE 4 STRAIN: ATCC 55124 / KO11; SOURCE 5 GENE: PYRB, EKO11_4066, KO11_22860; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 10 ORGANISM_TAXID: 595495; SOURCE 11 STRAIN: ATCC 55124 / KO11; SOURCE 12 GENE: PYRI, EKO11_4067, KO11_22855; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PYRIMIDINE NUCLEOTIDE BIOSYNTHESIS, FEEDBACK INHIBITION, COMPETING KEYWDS 2 PATHWAY PRODUCT ACTIVATION, ALLOSTERY, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR G.M.COCKRELL,Y.ZHENG,W.GUO,A.W.PETERSON,E.R.KANTROWITZ REVDAT 3 20-SEP-23 4KH0 1 REMARK LINK REVDAT 2 15-NOV-17 4KH0 1 REMARK REVDAT 1 27-NOV-13 4KH0 0 JRNL AUTH G.M.COCKRELL,Y.ZHENG,W.GUO,A.W.PETERSON,J.K.TRUONG, JRNL AUTH 2 E.R.KANTROWITZ JRNL TITL NEW PARADIGM FOR ALLOSTERIC REGULATION OF ESCHERICHIA COLI JRNL TITL 2 ASPARTATE TRANSCARBAMOYLASE. JRNL REF BIOCHEMISTRY V. 52 8036 2013 JRNL REFN ISSN 0006-2960 JRNL PMID 24138583 JRNL DOI 10.1021/BI401205N REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.69 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 62973 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 3195 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.7000 - 6.3928 1.00 2795 136 0.1542 0.1541 REMARK 3 2 6.3928 - 5.0757 1.00 2670 155 0.1718 0.2052 REMARK 3 3 5.0757 - 4.4346 1.00 2649 137 0.1362 0.1642 REMARK 3 4 4.4346 - 4.0293 1.00 2620 134 0.1422 0.1632 REMARK 3 5 4.0293 - 3.7406 1.00 2601 166 0.1519 0.1951 REMARK 3 6 3.7406 - 3.5202 1.00 2616 121 0.1590 0.1952 REMARK 3 7 3.5202 - 3.3439 1.00 2599 129 0.1741 0.2106 REMARK 3 8 3.3439 - 3.1984 1.00 2624 139 0.1920 0.2318 REMARK 3 9 3.1984 - 3.0753 1.00 2586 141 0.1957 0.2651 REMARK 3 10 3.0753 - 2.9692 1.00 2553 144 0.1930 0.2645 REMARK 3 11 2.9692 - 2.8763 1.00 2610 140 0.1959 0.2617 REMARK 3 12 2.8763 - 2.7941 1.00 2593 135 0.1874 0.2255 REMARK 3 13 2.7941 - 2.7206 1.00 2570 143 0.1755 0.2562 REMARK 3 14 2.7206 - 2.6542 1.00 2588 136 0.1804 0.2140 REMARK 3 15 2.6542 - 2.5939 1.00 2566 134 0.1793 0.2452 REMARK 3 16 2.5939 - 2.5387 1.00 2586 143 0.1860 0.2380 REMARK 3 17 2.5387 - 2.4879 1.00 2559 148 0.1774 0.2612 REMARK 3 18 2.4879 - 2.4409 1.00 2574 135 0.1798 0.2286 REMARK 3 19 2.4409 - 2.3973 1.00 2555 136 0.1985 0.2469 REMARK 3 20 2.3973 - 2.3567 1.00 2572 132 0.2055 0.2819 REMARK 3 21 2.3567 - 2.3187 1.00 2594 136 0.2130 0.3035 REMARK 3 22 2.3187 - 2.2830 1.00 2513 151 0.2251 0.2775 REMARK 3 23 2.2830 - 2.2500 1.00 2585 124 0.2306 0.3058 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.030 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 7511 REMARK 3 ANGLE : 1.136 10229 REMARK 3 CHIRALITY : 0.072 1174 REMARK 3 PLANARITY : 0.004 1306 REMARK 3 DIHEDRAL : 15.857 2810 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 23 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.1403 37.6464 1.0247 REMARK 3 T TENSOR REMARK 3 T11: 0.2538 T22: 0.3460 REMARK 3 T33: 0.2115 T12: 0.0037 REMARK 3 T13: -0.1685 T23: 0.1760 REMARK 3 L TENSOR REMARK 3 L11: 0.0188 L22: -0.0010 REMARK 3 L33: 0.0272 L12: 0.0028 REMARK 3 L13: 0.0240 L23: 0.0031 REMARK 3 S TENSOR REMARK 3 S11: 0.0240 S12: 0.1701 S13: 0.0230 REMARK 3 S21: -0.2333 S22: 0.0774 S23: 0.1587 REMARK 3 S31: 0.0117 S32: -0.0476 S33: 0.2059 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 54 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.9417 42.7732 12.1488 REMARK 3 T TENSOR REMARK 3 T11: 0.0757 T22: 0.0697 REMARK 3 T33: 0.1166 T12: 0.0628 REMARK 3 T13: -0.0529 T23: 0.1396 REMARK 3 L TENSOR REMARK 3 L11: 0.2230 L22: 0.0753 REMARK 3 L33: 0.2504 L12: 0.0674 REMARK 3 L13: -0.0042 L23: -0.0132 REMARK 3 S TENSOR REMARK 3 S11: 0.1270 S12: 0.0835 S13: 0.0406 REMARK 3 S21: -0.1213 S22: 0.0814 S23: 0.2144 REMARK 3 S31: 0.0069 S32: -0.1131 S33: 0.5763 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 135 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.3719 26.4998 10.4376 REMARK 3 T TENSOR REMARK 3 T11: 0.1368 T22: 0.2237 REMARK 3 T33: 0.4127 T12: -0.0481 REMARK 3 T13: -0.2177 T23: 0.1386 REMARK 3 L TENSOR REMARK 3 L11: 0.0133 L22: 0.0385 REMARK 3 L33: 0.0131 L12: 0.0210 REMARK 3 L13: 0.0054 L23: 0.0020 REMARK 3 S TENSOR REMARK 3 S11: 0.0351 S12: 0.0117 S13: -0.0861 REMARK 3 S21: -0.0461 S22: 0.0385 S23: 0.1005 REMARK 3 S31: 0.0647 S32: -0.0225 S33: 0.0724 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 167 THROUGH 187 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.7690 30.3382 13.6174 REMARK 3 T TENSOR REMARK 3 T11: 0.1032 T22: 0.2339 REMARK 3 T33: 0.4093 T12: -0.0146 REMARK 3 T13: -0.0902 T23: 0.1621 REMARK 3 L TENSOR REMARK 3 L11: 0.0056 L22: 0.0055 REMARK 3 L33: 0.0129 L12: 0.0054 REMARK 3 L13: 0.0079 L23: 0.0085 REMARK 3 S TENSOR REMARK 3 S11: -0.0012 S12: -0.0021 S13: -0.0076 REMARK 3 S21: -0.0398 S22: 0.0243 S23: 0.0928 REMARK 3 S31: 0.0227 S32: -0.0280 S33: 0.0070 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 188 THROUGH 215 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.0984 31.4709 21.5471 REMARK 3 T TENSOR REMARK 3 T11: 0.1621 T22: 0.3684 REMARK 3 T33: 0.6433 T12: 0.0145 REMARK 3 T13: 0.0002 T23: 0.2345 REMARK 3 L TENSOR REMARK 3 L11: 0.0024 L22: 0.0459 REMARK 3 L33: 0.0405 L12: -0.0025 REMARK 3 L13: 0.0044 L23: 0.0282 REMARK 3 S TENSOR REMARK 3 S11: -0.0135 S12: -0.0030 S13: -0.0082 REMARK 3 S21: -0.0200 S22: -0.0490 S23: 0.0937 REMARK 3 S31: -0.0037 S32: -0.0591 S33: -0.0211 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 216 THROUGH 236 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.7439 23.2992 21.3869 REMARK 3 T TENSOR REMARK 3 T11: 0.1067 T22: 0.2740 REMARK 3 T33: 0.4072 T12: -0.0291 REMARK 3 T13: -0.0159 T23: 0.1581 REMARK 3 L TENSOR REMARK 3 L11: 0.0671 L22: 0.0461 REMARK 3 L33: 0.0715 L12: -0.0332 REMARK 3 L13: 0.0364 L23: -0.0531 REMARK 3 S TENSOR REMARK 3 S11: 0.0249 S12: -0.0469 S13: -0.0952 REMARK 3 S21: -0.0013 S22: 0.0535 S23: 0.1286 REMARK 3 S31: 0.0446 S32: 0.0412 S33: 0.0239 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 237 THROUGH 261 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.9618 17.5205 24.3134 REMARK 3 T TENSOR REMARK 3 T11: 0.2771 T22: 0.3333 REMARK 3 T33: 0.5741 T12: -0.1011 REMARK 3 T13: -0.0216 T23: 0.1878 REMARK 3 L TENSOR REMARK 3 L11: 0.0050 L22: 0.0335 REMARK 3 L33: 0.0387 L12: 0.0132 REMARK 3 L13: -0.0123 L23: -0.0345 REMARK 3 S TENSOR REMARK 3 S11: 0.0427 S12: -0.0715 S13: -0.1127 REMARK 3 S21: 0.0884 S22: -0.0120 S23: 0.0924 REMARK 3 S31: -0.0803 S32: 0.0383 S33: 0.0116 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 262 THROUGH 284 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.0897 15.6771 16.1250 REMARK 3 T TENSOR REMARK 3 T11: 0.1357 T22: 0.1407 REMARK 3 T33: 0.4603 T12: -0.0235 REMARK 3 T13: -0.1364 T23: 0.1372 REMARK 3 L TENSOR REMARK 3 L11: 0.0232 L22: 0.0115 REMARK 3 L33: 0.0180 L12: 0.0157 REMARK 3 L13: 0.0188 L23: 0.0100 REMARK 3 S TENSOR REMARK 3 S11: 0.0165 S12: -0.0092 S13: -0.0698 REMARK 3 S21: -0.0091 S22: 0.0011 S23: 0.0350 REMARK 3 S31: 0.0300 S32: 0.0004 S33: -0.0054 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 285 THROUGH 310 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.6096 31.6618 -0.0091 REMARK 3 T TENSOR REMARK 3 T11: 0.2176 T22: 0.2317 REMARK 3 T33: 0.2417 T12: -0.0407 REMARK 3 T13: -0.2114 T23: 0.0336 REMARK 3 L TENSOR REMARK 3 L11: 0.0686 L22: 0.0634 REMARK 3 L33: 0.0198 L12: 0.0027 REMARK 3 L13: -0.0307 L23: 0.0159 REMARK 3 S TENSOR REMARK 3 S11: 0.0230 S12: 0.0964 S13: -0.0643 REMARK 3 S21: -0.0635 S22: 0.0003 S23: 0.0277 REMARK 3 S31: -0.0202 S32: 0.0074 S33: 0.0879 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 10 THROUGH 19 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.6255 81.6858 26.5883 REMARK 3 T TENSOR REMARK 3 T11: 0.3188 T22: 0.4008 REMARK 3 T33: 0.4220 T12: 0.2331 REMARK 3 T13: -0.0156 T23: -0.0235 REMARK 3 L TENSOR REMARK 3 L11: 0.0522 L22: 0.0071 REMARK 3 L33: 0.0137 L12: -0.0194 REMARK 3 L13: 0.0269 L23: -0.0101 REMARK 3 S TENSOR REMARK 3 S11: 0.0200 S12: 0.0176 S13: 0.0225 REMARK 3 S21: -0.0018 S22: -0.0023 S23: -0.0083 REMARK 3 S31: -0.0204 S32: -0.0100 S33: 0.0022 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 20 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.0791 72.6136 32.3440 REMARK 3 T TENSOR REMARK 3 T11: 0.4058 T22: 0.4406 REMARK 3 T33: 0.3397 T12: 0.2777 REMARK 3 T13: -0.0051 T23: -0.0823 REMARK 3 L TENSOR REMARK 3 L11: 0.0119 L22: 0.0242 REMARK 3 L33: 0.0578 L12: 0.0072 REMARK 3 L13: -0.0132 L23: 0.0202 REMARK 3 S TENSOR REMARK 3 S11: -0.0297 S12: 0.0095 S13: -0.0323 REMARK 3 S21: -0.0068 S22: -0.0508 S23: 0.0142 REMARK 3 S31: 0.0377 S32: -0.0248 S33: -0.0461 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 68 THROUGH 84 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.3234 65.5817 23.3722 REMARK 3 T TENSOR REMARK 3 T11: 0.4715 T22: 0.5717 REMARK 3 T33: 0.4592 T12: 0.2717 REMARK 3 T13: -0.0232 T23: -0.1380 REMARK 3 L TENSOR REMARK 3 L11: 0.0011 L22: 0.0012 REMARK 3 L33: 0.0002 L12: -0.0012 REMARK 3 L13: -0.0002 L23: 0.0004 REMARK 3 S TENSOR REMARK 3 S11: 0.0045 S12: -0.0067 S13: -0.0138 REMARK 3 S21: -0.0156 S22: 0.0168 S23: -0.0008 REMARK 3 S31: 0.0104 S32: -0.0308 S33: -0.0000 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 85 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.7476 71.6904 19.6819 REMARK 3 T TENSOR REMARK 3 T11: 0.4316 T22: 0.4876 REMARK 3 T33: 0.5576 T12: 0.2666 REMARK 3 T13: -0.0760 T23: -0.0600 REMARK 3 L TENSOR REMARK 3 L11: 0.0334 L22: 0.0068 REMARK 3 L33: 0.0079 L12: 0.0156 REMARK 3 L13: -0.0168 L23: -0.0073 REMARK 3 S TENSOR REMARK 3 S11: -0.0287 S12: 0.0646 S13: -0.0628 REMARK 3 S21: -0.0364 S22: -0.0437 S23: -0.0397 REMARK 3 S31: -0.0332 S32: -0.0567 S33: -0.0088 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 105 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.9762 50.7407 24.7625 REMARK 3 T TENSOR REMARK 3 T11: 0.0581 T22: 0.3132 REMARK 3 T33: 0.4556 T12: 0.0328 REMARK 3 T13: 0.0388 T23: 0.0423 REMARK 3 L TENSOR REMARK 3 L11: 0.0520 L22: 0.0096 REMARK 3 L33: 0.0097 L12: 0.0160 REMARK 3 L13: 0.0178 L23: 0.0045 REMARK 3 S TENSOR REMARK 3 S11: -0.0309 S12: -0.1033 S13: 0.0176 REMARK 3 S21: 0.0179 S22: -0.0266 S23: 0.0019 REMARK 3 S31: 0.0189 S32: -0.0174 S33: -0.0552 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): 59.5182 60.9752 79.2552 REMARK 3 T TENSOR REMARK 3 T11: 0.4281 T22: 0.3270 REMARK 3 T33: 0.2581 T12: 0.0350 REMARK 3 T13: 0.0438 T23: -0.0757 REMARK 3 L TENSOR REMARK 3 L11: 0.0007 L22: 0.0085 REMARK 3 L33: 0.0063 L12: 0.0016 REMARK 3 L13: 0.0023 L23: 0.0082 REMARK 3 S TENSOR REMARK 3 S11: 0.0741 S12: 0.0055 S13: 0.0956 REMARK 3 S21: 0.0625 S22: 0.0695 S23: 0.0337 REMARK 3 S31: -0.0283 S32: -0.0564 S33: -0.0001 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 33 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): 59.7938 45.0490 76.9549 REMARK 3 T TENSOR REMARK 3 T11: 0.3042 T22: 0.3360 REMARK 3 T33: 0.0989 T12: 0.0335 REMARK 3 T13: 0.0297 T23: 0.0241 REMARK 3 L TENSOR REMARK 3 L11: 0.0069 L22: 0.0068 REMARK 3 L33: 0.0017 L12: -0.0011 REMARK 3 L13: 0.0040 L23: 0.0001 REMARK 3 S TENSOR REMARK 3 S11: 0.0226 S12: -0.0203 S13: -0.0238 REMARK 3 S21: -0.0035 S22: 0.0105 S23: 0.0172 REMARK 3 S31: 0.0174 S32: -0.0112 S33: -0.0000 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 54 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): 59.0050 52.2820 67.8078 REMARK 3 T TENSOR REMARK 3 T11: 0.2722 T22: 0.2317 REMARK 3 T33: 0.1536 T12: -0.0104 REMARK 3 T13: 0.0378 T23: -0.0017 REMARK 3 L TENSOR REMARK 3 L11: 0.0439 L22: 0.0505 REMARK 3 L33: 0.0535 L12: -0.0204 REMARK 3 L13: -0.0182 L23: 0.0102 REMARK 3 S TENSOR REMARK 3 S11: 0.0476 S12: -0.0232 S13: 0.1488 REMARK 3 S21: -0.0597 S22: 0.0183 S23: 0.0292 REMARK 3 S31: -0.2536 S32: -0.0503 S33: 0.0000 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 167 THROUGH 195 ) REMARK 3 ORIGIN FOR THE GROUP (A): 68.3099 68.8601 62.6296 REMARK 3 T TENSOR REMARK 3 T11: 0.5842 T22: 0.2870 REMARK 3 T33: 0.3176 T12: -0.0330 REMARK 3 T13: 0.0450 T23: 0.0323 REMARK 3 L TENSOR REMARK 3 L11: 0.0037 L22: 0.0085 REMARK 3 L33: 0.0015 L12: 0.0048 REMARK 3 L13: -0.0005 L23: -0.0034 REMARK 3 S TENSOR REMARK 3 S11: 0.0243 S12: 0.0415 S13: 0.1616 REMARK 3 S21: -0.0614 S22: 0.0386 S23: -0.0259 REMARK 3 S31: -0.0706 S32: 0.0329 S33: 0.0001 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 196 THROUGH 221 ) REMARK 3 ORIGIN FOR THE GROUP (A): 71.3065 74.3086 60.1230 REMARK 3 T TENSOR REMARK 3 T11: 0.7913 T22: 0.4757 REMARK 3 T33: 0.6761 T12: 0.0011 REMARK 3 T13: 0.1211 T23: 0.1007 REMARK 3 L TENSOR REMARK 3 L11: 0.0032 L22: 0.0087 REMARK 3 L33: 0.0019 L12: 0.0010 REMARK 3 L13: -0.0014 L23: -0.0028 REMARK 3 S TENSOR REMARK 3 S11: -0.0410 S12: 0.0213 S13: 0.0167 REMARK 3 S21: -0.0516 S22: -0.0192 S23: -0.0126 REMARK 3 S31: -0.0762 S32: 0.0649 S33: -0.0002 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 222 THROUGH 261 ) REMARK 3 ORIGIN FOR THE GROUP (A): 76.8078 60.8771 56.0503 REMARK 3 T TENSOR REMARK 3 T11: 0.4771 T22: 0.4205 REMARK 3 T33: 0.3266 T12: -0.1103 REMARK 3 T13: 0.1086 T23: -0.0158 REMARK 3 L TENSOR REMARK 3 L11: 0.0170 L22: 0.0288 REMARK 3 L33: 0.0233 L12: 0.0042 REMARK 3 L13: -0.0083 L23: 0.0137 REMARK 3 S TENSOR REMARK 3 S11: 0.0677 S12: 0.0446 S13: 0.1960 REMARK 3 S21: -0.0834 S22: 0.0561 S23: -0.1799 REMARK 3 S31: -0.0160 S32: 0.0463 S33: 0.0002 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 262 THROUGH 310 ) REMARK 3 ORIGIN FOR THE GROUP (A): 73.1483 54.5435 71.8563 REMARK 3 T TENSOR REMARK 3 T11: 0.3534 T22: 0.3285 REMARK 3 T33: 0.2174 T12: -0.0372 REMARK 3 T13: 0.0524 T23: -0.0648 REMARK 3 L TENSOR REMARK 3 L11: 0.0244 L22: 0.0517 REMARK 3 L33: 0.0052 L12: -0.0122 REMARK 3 L13: 0.0084 L23: -0.0119 REMARK 3 S TENSOR REMARK 3 S11: -0.0239 S12: -0.0585 S13: 0.0823 REMARK 3 S21: 0.0077 S22: -0.0011 S23: -0.1744 REMARK 3 S31: -0.0796 S32: -0.0208 S33: -0.0053 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 10 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.1415 78.2136 45.1188 REMARK 3 T TENSOR REMARK 3 T11: 0.5589 T22: 0.5051 REMARK 3 T33: 0.3157 T12: 0.2942 REMARK 3 T13: -0.0259 T23: -0.0075 REMARK 3 L TENSOR REMARK 3 L11: 0.0682 L22: 0.1119 REMARK 3 L33: 0.1518 L12: -0.0473 REMARK 3 L13: -0.0243 L23: 0.0551 REMARK 3 S TENSOR REMARK 3 S11: -0.1021 S12: -0.0698 S13: -0.0103 REMARK 3 S21: 0.0956 S22: -0.0937 S23: 0.0424 REMARK 3 S31: 0.0090 S32: 0.0117 S33: -0.0202 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 68 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.1739 72.3432 54.8819 REMARK 3 T TENSOR REMARK 3 T11: 0.6211 T22: 0.3610 REMARK 3 T33: 0.3320 T12: 0.1794 REMARK 3 T13: -0.1621 T23: 0.0224 REMARK 3 L TENSOR REMARK 3 L11: 0.1025 L22: 0.1779 REMARK 3 L33: 0.0536 L12: -0.0086 REMARK 3 L13: -0.0132 L23: -0.0969 REMARK 3 S TENSOR REMARK 3 S11: -0.0484 S12: -0.0704 S13: 0.0111 REMARK 3 S21: 0.0790 S22: -0.1197 S23: -0.0979 REMARK 3 S31: -0.1832 S32: -0.0314 S33: -0.0859 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4KH0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000079327. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.075 REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK DOUBLE CRYSTAL REMARK 200 SAGITTAL FOCUSING MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62983 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 24.10 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 22.00 REMARK 200 R MERGE FOR SHELL (I) : 0.74100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1D09 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM MALEIC ACID, 1 MM PALA, 3 MM REMARK 280 SODIUM AZIDE, PH 5.9, MICRODIALYSIS, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 44160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 100070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -207.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 121.13300 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 60.56650 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 104.90426 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 567 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 HIS B 3 REMARK 465 MET D 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU D 144 O HOH D 325 2.06 REMARK 500 OD1 ASP C 271 O HOH C 665 2.09 REMARK 500 O ASP A 253 O HOH A 684 2.10 REMARK 500 O HOH A 677 O HOH A 682 2.11 REMARK 500 OD1 ASP A 271 O HOH A 670 2.11 REMARK 500 O GLU A 221 NZ LYS A 258 2.14 REMARK 500 NZ LYS B 56 O2A ATP B 203 2.15 REMARK 500 O2' ATP D 202 O HOH D 336 2.15 REMARK 500 O THR A 275 O HOH A 597 2.17 REMARK 500 OD1 ASN D 132 O HOH D 331 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 N ALA C 1 OE2 GLU D 68 4556 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 6 16.36 59.67 REMARK 500 ASN A 132 -87.77 -83.02 REMARK 500 ASN A 256 35.36 -92.21 REMARK 500 LEU A 267 158.31 70.48 REMARK 500 VAL A 270 -90.07 -94.90 REMARK 500 TRP A 284 16.03 -142.95 REMARK 500 GLN B 24 -7.26 69.38 REMARK 500 LEU B 32 -72.34 -52.08 REMARK 500 ASN B 105 -52.82 72.40 REMARK 500 ALA B 131 -133.29 46.45 REMARK 500 ASN C 132 -87.71 -80.51 REMARK 500 LEU C 267 157.50 69.46 REMARK 500 VAL C 270 -91.63 -102.66 REMARK 500 TRP C 284 17.72 -144.21 REMARK 500 HIS D 3 -32.41 -26.64 REMARK 500 ASN D 5 6.91 -66.38 REMARK 500 GLN D 24 -0.80 73.18 REMARK 500 ASN D 105 -45.29 73.57 REMARK 500 ARG D 130 -168.02 -127.63 REMARK 500 ALA D 131 -81.70 -68.22 REMARK 500 ASP D 133 -142.40 -132.14 REMARK 500 TYR D 140 -64.22 -90.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 109 SG REMARK 620 2 CYS B 114 SG 118.1 REMARK 620 3 CYS B 138 SG 113.3 104.8 REMARK 620 4 CYS B 141 SG 102.3 110.2 107.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 204 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP B 202 O2B REMARK 620 2 ATP B 202 O1G 93.5 REMARK 620 3 ATP B 203 O3G 161.8 90.3 REMARK 620 4 ATP B 203 O1B 94.7 171.8 82.2 REMARK 620 5 HOH B 302 O 85.0 98.1 112.1 81.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 109 SG REMARK 620 2 CYS D 114 SG 118.1 REMARK 620 3 CYS D 138 SG 112.4 110.3 REMARK 620 4 CYS D 141 SG 98.5 112.2 103.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 204 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP D 202 O2B REMARK 620 2 ATP D 202 O2G 93.7 REMARK 620 3 ATP D 203 O1G 161.7 94.0 REMARK 620 4 ATP D 203 O2B 94.5 167.8 75.6 REMARK 620 5 HOH D 301 O 106.2 85.5 90.9 100.9 REMARK 620 6 HOH D 302 O 85.9 87.8 77.9 83.7 166.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PAL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PAL C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP D 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP D 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 204 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4KGV RELATED DB: PDB REMARK 900 RELATED ID: 4KGX RELATED DB: PDB REMARK 900 RELATED ID: 4KGZ RELATED DB: PDB REMARK 900 RELATED ID: 4KH1 RELATED DB: PDB DBREF 4KH0 A 1 310 UNP E8Y328 E8Y328_ECOKO 2 311 DBREF 4KH0 B 1 153 UNP E8Y329 E8Y329_ECOKO 1 153 DBREF 4KH0 C 1 310 UNP E8Y328 E8Y328_ECOKO 2 311 DBREF 4KH0 D 1 153 UNP E8Y329 E8Y329_ECOKO 1 153 SEQRES 1 A 310 ALA ASN PRO LEU TYR GLN LYS HIS ILE ILE SER ILE ASN SEQRES 2 A 310 ASP LEU SER ARG ASP ASP LEU ASN LEU VAL LEU ALA THR SEQRES 3 A 310 ALA ALA LYS LEU LYS ALA ASN PRO GLN PRO GLU LEU LEU SEQRES 4 A 310 LYS HIS LYS VAL ILE ALA SER CYS PHE PHE GLU ALA SER SEQRES 5 A 310 THR ARG THR ARG LEU SER PHE GLU THR SER MET HIS ARG SEQRES 6 A 310 LEU GLY ALA SER VAL VAL GLY PHE SER ASP SER ALA ASN SEQRES 7 A 310 THR SER LEU GLY LYS LYS GLY GLU THR LEU ALA ASP THR SEQRES 8 A 310 ILE SER VAL ILE SER THR TYR VAL ASP ALA ILE VAL MET SEQRES 9 A 310 ARG HIS PRO GLN GLU GLY ALA ALA ARG LEU ALA THR GLU SEQRES 10 A 310 PHE SER GLY ASN VAL PRO VAL LEU ASN ALA GLY ASP GLY SEQRES 11 A 310 SER ASN GLN HIS PRO THR GLN THR LEU LEU ASP LEU PHE SEQRES 12 A 310 THR ILE GLN GLU THR GLN GLY ARG LEU ASP ASN LEU HIS SEQRES 13 A 310 VAL ALA MET VAL GLY ASP LEU LYS TYR GLY ARG THR VAL SEQRES 14 A 310 HIS SER LEU THR GLN ALA LEU ALA LYS PHE ASP GLY ASN SEQRES 15 A 310 ARG PHE TYR PHE ILE ALA PRO ASP ALA LEU ALA MET PRO SEQRES 16 A 310 GLN TYR ILE LEU ASP MET LEU ASP GLU LYS GLY ILE ALA SEQRES 17 A 310 TRP SER LEU HIS SER SER ILE GLU GLU VAL MET ALA GLU SEQRES 18 A 310 VAL ASP ILE LEU TYR MET THR ARG VAL GLN LYS GLU ARG SEQRES 19 A 310 LEU ASP PRO SER GLU TYR ALA ASN VAL LYS ALA GLN PHE SEQRES 20 A 310 VAL LEU ARG ALA SER ASP LEU HIS ASN ALA LYS ALA ASN SEQRES 21 A 310 MET LYS VAL LEU HIS PRO LEU PRO ARG VAL ASP GLU ILE SEQRES 22 A 310 ALA THR ASP VAL ASP LYS THR PRO HIS ALA TRP TYR PHE SEQRES 23 A 310 GLN GLN ALA GLY ASN GLY ILE PHE ALA ARG GLN ALA LEU SEQRES 24 A 310 LEU ALA LEU VAL LEU ASN ARG ASP LEU VAL LEU SEQRES 1 B 153 MET THR HIS ASP ASN LYS LEU GLN VAL GLU ALA ILE LYS SEQRES 2 B 153 ARG GLY THR VAL ILE ASP HIS ILE PRO ALA GLN ILE GLY SEQRES 3 B 153 PHE LYS LEU LEU SER LEU PHE LYS LEU THR GLU THR ASP SEQRES 4 B 153 GLN ARG ILE THR ILE GLY LEU ASN LEU PRO SER GLY GLU SEQRES 5 B 153 MET GLY ARG LYS ASP LEU ILE LYS ILE GLU ASN THR PHE SEQRES 6 B 153 LEU SER GLU ASP GLN VAL ASP GLN LEU ALA LEU TYR ALA SEQRES 7 B 153 PRO GLN ALA THR VAL ASN ARG ILE ASP ASN TYR GLU VAL SEQRES 8 B 153 VAL GLY LYS SER ARG PRO SER LEU PRO GLU ARG ILE ASP SEQRES 9 B 153 ASN VAL LEU VAL CYS PRO ASN SER ASN CYS ILE SER HIS SEQRES 10 B 153 ALA GLU PRO VAL SER SER SER PHE ALA VAL ARG LYS ARG SEQRES 11 B 153 ALA ASN ASP ILE ALA LEU LYS CYS LYS TYR CYS GLU LYS SEQRES 12 B 153 GLU PHE SER HIS ASN VAL VAL LEU ALA ASN SEQRES 1 C 310 ALA ASN PRO LEU TYR GLN LYS HIS ILE ILE SER ILE ASN SEQRES 2 C 310 ASP LEU SER ARG ASP ASP LEU ASN LEU VAL LEU ALA THR SEQRES 3 C 310 ALA ALA LYS LEU LYS ALA ASN PRO GLN PRO GLU LEU LEU SEQRES 4 C 310 LYS HIS LYS VAL ILE ALA SER CYS PHE PHE GLU ALA SER SEQRES 5 C 310 THR ARG THR ARG LEU SER PHE GLU THR SER MET HIS ARG SEQRES 6 C 310 LEU GLY ALA SER VAL VAL GLY PHE SER ASP SER ALA ASN SEQRES 7 C 310 THR SER LEU GLY LYS LYS GLY GLU THR LEU ALA ASP THR SEQRES 8 C 310 ILE SER VAL ILE SER THR TYR VAL ASP ALA ILE VAL MET SEQRES 9 C 310 ARG HIS PRO GLN GLU GLY ALA ALA ARG LEU ALA THR GLU SEQRES 10 C 310 PHE SER GLY ASN VAL PRO VAL LEU ASN ALA GLY ASP GLY SEQRES 11 C 310 SER ASN GLN HIS PRO THR GLN THR LEU LEU ASP LEU PHE SEQRES 12 C 310 THR ILE GLN GLU THR GLN GLY ARG LEU ASP ASN LEU HIS SEQRES 13 C 310 VAL ALA MET VAL GLY ASP LEU LYS TYR GLY ARG THR VAL SEQRES 14 C 310 HIS SER LEU THR GLN ALA LEU ALA LYS PHE ASP GLY ASN SEQRES 15 C 310 ARG PHE TYR PHE ILE ALA PRO ASP ALA LEU ALA MET PRO SEQRES 16 C 310 GLN TYR ILE LEU ASP MET LEU ASP GLU LYS GLY ILE ALA SEQRES 17 C 310 TRP SER LEU HIS SER SER ILE GLU GLU VAL MET ALA GLU SEQRES 18 C 310 VAL ASP ILE LEU TYR MET THR ARG VAL GLN LYS GLU ARG SEQRES 19 C 310 LEU ASP PRO SER GLU TYR ALA ASN VAL LYS ALA GLN PHE SEQRES 20 C 310 VAL LEU ARG ALA SER ASP LEU HIS ASN ALA LYS ALA ASN SEQRES 21 C 310 MET LYS VAL LEU HIS PRO LEU PRO ARG VAL ASP GLU ILE SEQRES 22 C 310 ALA THR ASP VAL ASP LYS THR PRO HIS ALA TRP TYR PHE SEQRES 23 C 310 GLN GLN ALA GLY ASN GLY ILE PHE ALA ARG GLN ALA LEU SEQRES 24 C 310 LEU ALA LEU VAL LEU ASN ARG ASP LEU VAL LEU SEQRES 1 D 153 MET THR HIS ASP ASN LYS LEU GLN VAL GLU ALA ILE LYS SEQRES 2 D 153 ARG GLY THR VAL ILE ASP HIS ILE PRO ALA GLN ILE GLY SEQRES 3 D 153 PHE LYS LEU LEU SER LEU PHE LYS LEU THR GLU THR ASP SEQRES 4 D 153 GLN ARG ILE THR ILE GLY LEU ASN LEU PRO SER GLY GLU SEQRES 5 D 153 MET GLY ARG LYS ASP LEU ILE LYS ILE GLU ASN THR PHE SEQRES 6 D 153 LEU SER GLU ASP GLN VAL ASP GLN LEU ALA LEU TYR ALA SEQRES 7 D 153 PRO GLN ALA THR VAL ASN ARG ILE ASP ASN TYR GLU VAL SEQRES 8 D 153 VAL GLY LYS SER ARG PRO SER LEU PRO GLU ARG ILE ASP SEQRES 9 D 153 ASN VAL LEU VAL CYS PRO ASN SER ASN CYS ILE SER HIS SEQRES 10 D 153 ALA GLU PRO VAL SER SER SER PHE ALA VAL ARG LYS ARG SEQRES 11 D 153 ALA ASN ASP ILE ALA LEU LYS CYS LYS TYR CYS GLU LYS SEQRES 12 D 153 GLU PHE SER HIS ASN VAL VAL LEU ALA ASN HET PAL A 401 16 HET ZN B 201 1 HET ATP B 202 31 HET ATP B 203 31 HET MG B 204 1 HET PAL C 401 16 HET ZN D 201 1 HET ATP D 202 31 HET ATP D 203 31 HET MG D 204 1 HETNAM PAL N-(PHOSPHONACETYL)-L-ASPARTIC ACID HETNAM ZN ZINC ION HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 5 PAL 2(C6 H10 N O8 P) FORMUL 6 ZN 2(ZN 2+) FORMUL 7 ATP 4(C10 H16 N5 O13 P3) FORMUL 9 MG 2(MG 2+) FORMUL 15 HOH *467(H2 O) HELIX 1 1 SER A 11 LEU A 15 5 5 HELIX 2 2 SER A 16 ASN A 33 1 18 HELIX 3 3 THR A 53 LEU A 66 1 14 HELIX 4 4 ASP A 75 ASN A 78 5 4 HELIX 5 5 THR A 79 GLY A 85 1 7 HELIX 6 6 THR A 87 SER A 96 1 10 HELIX 7 7 GLY A 110 GLU A 117 1 8 HELIX 8 8 HIS A 134 GLY A 150 1 17 HELIX 9 9 GLY A 166 ALA A 177 1 12 HELIX 10 10 PRO A 189 ALA A 193 5 5 HELIX 11 11 PRO A 195 LYS A 205 1 11 HELIX 12 12 ILE A 215 ALA A 220 1 6 HELIX 13 13 ASP A 236 VAL A 243 5 8 HELIX 14 14 ARG A 250 HIS A 255 5 6 HELIX 15 15 ALA A 274 ASP A 278 5 5 HELIX 16 16 TRP A 284 ASN A 291 1 8 HELIX 17 17 ASN A 291 ASN A 305 1 15 HELIX 18 18 ILE B 25 PHE B 33 1 9 HELIX 19 19 SER B 67 LEU B 74 1 8 HELIX 20 20 ALA B 75 TYR B 77 5 3 HELIX 21 21 CYS B 114 ALA B 118 5 5 HELIX 22 22 SER C 11 LEU C 15 5 5 HELIX 23 23 SER C 16 ASN C 33 1 18 HELIX 24 24 THR C 53 LEU C 66 1 14 HELIX 25 25 THR C 79 LYS C 84 1 6 HELIX 26 26 THR C 87 SER C 96 1 10 HELIX 27 27 GLY C 110 GLU C 117 1 8 HELIX 28 28 HIS C 134 GLY C 150 1 17 HELIX 29 29 GLY C 166 ALA C 177 1 12 HELIX 30 30 PRO C 189 ALA C 193 5 5 HELIX 31 31 PRO C 195 GLU C 204 1 10 HELIX 32 32 ILE C 215 ALA C 220 1 6 HELIX 33 33 ASP C 236 VAL C 243 5 8 HELIX 34 34 ARG C 250 HIS C 255 5 6 HELIX 35 35 ALA C 274 ASP C 278 5 5 HELIX 36 36 TRP C 284 ASN C 291 1 8 HELIX 37 37 ASN C 291 ASN C 305 1 15 HELIX 38 38 ILE D 25 PHE D 33 1 9 HELIX 39 39 SER D 67 ALA D 78 1 12 HELIX 40 40 CYS D 114 ALA D 118 5 5 HELIX 41 41 HIS D 147 LEU D 151 1 5 SHEET 1 A 4 SER A 69 PHE A 73 0 SHEET 2 A 4 VAL A 43 PHE A 48 1 N SER A 46 O VAL A 71 SHEET 3 A 4 ALA A 101 HIS A 106 1 O VAL A 103 N CYS A 47 SHEET 4 A 4 VAL A 124 ASP A 129 1 O LEU A 125 N ILE A 102 SHEET 1 B 5 TRP A 209 LEU A 211 0 SHEET 2 B 5 ARG A 183 ILE A 187 1 N PHE A 186 O SER A 210 SHEET 3 B 5 HIS A 156 VAL A 160 1 N VAL A 157 O ARG A 183 SHEET 4 B 5 ILE A 224 MET A 227 1 O TYR A 226 N ALA A 158 SHEET 5 B 5 LYS A 262 LEU A 264 1 O LEU A 264 N MET A 227 SHEET 1 C10 GLU B 90 SER B 95 0 SHEET 2 C10 THR B 82 ASP B 87 -1 N VAL B 83 O SER B 95 SHEET 3 C10 GLY B 15 PRO B 22 -1 N ASP B 19 O THR B 82 SHEET 4 C10 GLY B 54 GLU B 62 -1 O ILE B 59 N ILE B 18 SHEET 5 C10 ILE B 42 SER B 50 -1 N THR B 43 O LYS B 60 SHEET 6 C10 ILE D 42 SER D 50 -1 O ILE D 42 N LEU B 46 SHEET 7 C10 GLY D 54 GLU D 62 -1 O GLY D 54 N SER D 50 SHEET 8 C10 GLY D 15 ILE D 21 -1 N ILE D 21 O ASP D 57 SHEET 9 C10 THR D 82 ASP D 87 -1 O THR D 82 N ASP D 19 SHEET 10 C10 GLU D 90 SER D 95 -1 O GLY D 93 N ARG D 85 SHEET 1 D 4 ARG B 102 ASP B 104 0 SHEET 2 D 4 SER B 124 ARG B 130 -1 O PHE B 125 N ILE B 103 SHEET 3 D 4 ASP B 133 CYS B 138 -1 O ASP B 133 N ARG B 130 SHEET 4 D 4 GLU B 144 SER B 146 -1 O PHE B 145 N LEU B 136 SHEET 1 E 4 SER C 69 PHE C 73 0 SHEET 2 E 4 VAL C 43 PHE C 48 1 N PHE C 48 O PHE C 73 SHEET 3 E 4 ALA C 101 HIS C 106 1 O VAL C 103 N CYS C 47 SHEET 4 E 4 VAL C 124 ASP C 129 1 O LEU C 125 N ILE C 102 SHEET 1 F 5 TRP C 209 LEU C 211 0 SHEET 2 F 5 ARG C 183 ILE C 187 1 N PHE C 186 O SER C 210 SHEET 3 F 5 HIS C 156 VAL C 160 1 N MET C 159 O ILE C 187 SHEET 4 F 5 ILE C 224 MET C 227 1 O TYR C 226 N ALA C 158 SHEET 5 F 5 LYS C 262 LEU C 264 1 O LEU C 264 N MET C 227 SHEET 1 G 4 ARG D 102 ASP D 104 0 SHEET 2 G 4 SER D 124 LYS D 129 -1 O PHE D 125 N ILE D 103 SHEET 3 G 4 ILE D 134 CYS D 138 -1 O LYS D 137 N ALA D 126 SHEET 4 G 4 GLU D 144 SER D 146 -1 O PHE D 145 N LEU D 136 LINK SG CYS B 109 ZN ZN B 201 1555 1555 2.31 LINK SG CYS B 114 ZN ZN B 201 1555 1555 2.49 LINK SG CYS B 138 ZN ZN B 201 1555 1555 2.30 LINK SG CYS B 141 ZN ZN B 201 1555 1555 2.12 LINK O2B ATP B 202 MG MG B 204 1555 1555 1.88 LINK O1G ATP B 202 MG MG B 204 1555 1555 2.17 LINK O3G ATP B 203 MG MG B 204 1555 1555 1.75 LINK O1B ATP B 203 MG MG B 204 1555 1555 2.02 LINK MG MG B 204 O HOH B 302 1555 1555 2.07 LINK SG CYS D 109 ZN ZN D 201 1555 1555 2.41 LINK SG CYS D 114 ZN ZN D 201 1555 1555 2.27 LINK SG CYS D 138 ZN ZN D 201 1555 1555 2.25 LINK SG CYS D 141 ZN ZN D 201 1555 1555 2.34 LINK O2B ATP D 202 MG MG D 204 1555 1555 1.88 LINK O2G ATP D 202 MG MG D 204 1555 1555 1.97 LINK O1G ATP D 203 MG MG D 204 1555 1555 2.00 LINK O2B ATP D 203 MG MG D 204 1555 1555 2.08 LINK MG MG D 204 O HOH D 301 1555 1555 2.09 LINK MG MG D 204 O HOH D 302 1555 1555 2.09 CISPEP 1 LEU A 267 PRO A 268 0 -2.11 CISPEP 2 LEU C 267 PRO C 268 0 0.02 SITE 1 AC1 15 SER A 52 THR A 53 ARG A 54 THR A 55 SITE 2 AC1 15 SER A 80 LYS A 84 ARG A 105 HIS A 134 SITE 3 AC1 15 ARG A 167 ARG A 229 GLN A 231 LEU A 267 SITE 4 AC1 15 HOH A 514 HOH A 515 HOH A 517 SITE 1 AC2 4 CYS B 109 CYS B 114 CYS B 138 CYS B 141 SITE 1 AC3 17 ALA B 11 ILE B 12 VAL B 17 ASP B 19 SITE 2 AC3 17 HIS B 20 LYS B 60 ASN B 84 ILE B 86 SITE 3 AC3 17 TYR B 89 VAL B 91 LYS B 94 ATP B 203 SITE 4 AC3 17 MG B 204 HOH B 302 HOH B 358 HOH B 359 SITE 5 AC3 17 LYS D 6 SITE 1 AC4 17 HIS B 20 THR B 43 LEU B 48 PRO B 49 SITE 2 AC4 17 SER B 50 GLY B 51 GLU B 52 LYS B 56 SITE 3 AC4 17 LYS B 60 ATP B 202 MG B 204 HOH B 301 SITE 4 AC4 17 HOH B 302 HOH B 358 LYS D 6 VAL D 9 SITE 5 AC4 17 THR D 43 SITE 1 AC5 4 ATP B 202 ATP B 203 HOH B 302 LYS D 6 SITE 1 AC6 16 SER C 52 THR C 53 ARG C 54 THR C 55 SITE 2 AC6 16 SER C 80 LYS C 84 ARG C 105 HIS C 134 SITE 3 AC6 16 ARG C 167 THR C 168 ARG C 229 GLN C 231 SITE 4 AC6 16 LEU C 267 HOH C 506 HOH C 540 HOH C 617 SITE 1 AC7 4 CYS D 109 CYS D 114 CYS D 138 CYS D 141 SITE 1 AC8 17 LYS B 6 LEU B 7 ALA D 11 ILE D 12 SITE 2 AC8 17 VAL D 17 ASP D 19 HIS D 20 LYS D 60 SITE 3 AC8 17 ILE D 86 TYR D 89 LYS D 94 ATP D 203 SITE 4 AC8 17 MG D 204 HOH D 301 HOH D 302 HOH D 309 SITE 5 AC8 17 HOH D 336 SITE 1 AC9 16 LYS B 6 VAL B 9 GLU B 10 HIS D 20 SITE 2 AC9 16 LEU D 48 PRO D 49 SER D 50 GLY D 51 SITE 3 AC9 16 GLU D 52 LYS D 56 LYS D 60 ATP D 202 SITE 4 AC9 16 MG D 204 HOH D 301 HOH D 302 HOH D 336 SITE 1 BC1 4 ATP D 202 ATP D 203 HOH D 301 HOH D 302 CRYST1 121.133 121.133 155.107 90.00 90.00 120.00 P 3 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008255 0.004766 0.000000 0.00000 SCALE2 0.000000 0.009533 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006447 0.00000