data_4KLZ # _entry.id 4KLZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4KLZ pdb_00004klz 10.2210/pdb4klz/pdb RCSB RCSB079505 ? ? WWPDB D_1000079505 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 5P21 _pdbx_database_related.details ;REFINED CRYSTAL STRUCTURE OF THE TRIPHOSPHATE CONFORMATION OF H-RAS P21 AT 1.35 ANGSTROMS RESOLUTION: IMPLICATIONS FOR THE MECHANISM OF GTP HYDROLYSIS ; _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4KLZ _pdbx_database_status.recvd_initial_deposition_date 2013-05-07 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Shah, D.M.' 1 'Kobayashi, M.' 2 'Keizers, P.H.' 3 'Tuin, A.W.' 4 'Ab, E.' 5 'Manning, L.' 6 'Rzepiela, A.A.' 7 'Andrews, M.' 8 'Hoedemaeker, F.J.' 9 'Siegal, G.' 10 # _citation.id primary _citation.title ;Inhibition of Small GTPases by Stabilization of the GDP Complex, a Novel Approach applied to Rit1, a Target for Rheumatoid Arthritis ; _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Shah, D.M.' 1 ? primary 'Kobayashi, M.' 2 ? primary 'Keizers, P.H.' 3 ? primary 'Tuin, A.W.' 4 ? primary 'Ab, E.' 5 ? primary 'Manning, L.' 6 ? primary 'Rzepiela, A.A.' 7 ? primary 'Andrews, M.' 8 ? primary 'Hoedemaeker, F.J.' 9 ? primary 'Siegal, G.' 10 ? # _cell.entry_id 4KLZ _cell.length_a 40.278 _cell.length_b 37.048 _cell.length_c 40.736 _cell.angle_alpha 90.00 _cell.angle_beta 95.90 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4KLZ _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'GTP-binding protein Rit1' 20085.787 1 ? ? 'GTP binding domain, unp residues 19-189' ? 2 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 water nat water 18.015 18 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Ras-like protein expressed in many tissues, Ras-like without CAAX protein 1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSREYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGF IICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFETSAAYRYYIDDVFH ALVREIRRKEKEA ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSREYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGF IICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFETSAAYRYYIDDVFH ALVREIRRKEKEA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 ARG n 1 5 GLU n 1 6 TYR n 1 7 LYS n 1 8 LEU n 1 9 VAL n 1 10 MET n 1 11 LEU n 1 12 GLY n 1 13 ALA n 1 14 GLY n 1 15 GLY n 1 16 VAL n 1 17 GLY n 1 18 LYS n 1 19 SER n 1 20 ALA n 1 21 MET n 1 22 THR n 1 23 MET n 1 24 GLN n 1 25 PHE n 1 26 ILE n 1 27 SER n 1 28 HIS n 1 29 ARG n 1 30 PHE n 1 31 PRO n 1 32 GLU n 1 33 ASP n 1 34 HIS n 1 35 ASP n 1 36 PRO n 1 37 THR n 1 38 ILE n 1 39 GLU n 1 40 ASP n 1 41 ALA n 1 42 TYR n 1 43 LYS n 1 44 ILE n 1 45 ARG n 1 46 ILE n 1 47 ARG n 1 48 ILE n 1 49 ASP n 1 50 ASP n 1 51 GLU n 1 52 PRO n 1 53 ALA n 1 54 ASN n 1 55 LEU n 1 56 ASP n 1 57 ILE n 1 58 LEU n 1 59 ASP n 1 60 THR n 1 61 ALA n 1 62 GLY n 1 63 GLN n 1 64 ALA n 1 65 GLU n 1 66 PHE n 1 67 THR n 1 68 ALA n 1 69 MET n 1 70 ARG n 1 71 ASP n 1 72 GLN n 1 73 TYR n 1 74 MET n 1 75 ARG n 1 76 ALA n 1 77 GLY n 1 78 GLU n 1 79 GLY n 1 80 PHE n 1 81 ILE n 1 82 ILE n 1 83 CYS n 1 84 TYR n 1 85 SER n 1 86 ILE n 1 87 THR n 1 88 ASP n 1 89 ARG n 1 90 ARG n 1 91 SER n 1 92 PHE n 1 93 HIS n 1 94 GLU n 1 95 VAL n 1 96 ARG n 1 97 GLU n 1 98 PHE n 1 99 LYS n 1 100 GLN n 1 101 LEU n 1 102 ILE n 1 103 TYR n 1 104 ARG n 1 105 VAL n 1 106 ARG n 1 107 ARG n 1 108 THR n 1 109 ASP n 1 110 ASP n 1 111 THR n 1 112 PRO n 1 113 VAL n 1 114 VAL n 1 115 LEU n 1 116 VAL n 1 117 GLY n 1 118 ASN n 1 119 LYS n 1 120 SER n 1 121 ASP n 1 122 LEU n 1 123 LYS n 1 124 GLN n 1 125 LEU n 1 126 ARG n 1 127 GLN n 1 128 VAL n 1 129 THR n 1 130 LYS n 1 131 GLU n 1 132 GLU n 1 133 GLY n 1 134 LEU n 1 135 ALA n 1 136 LEU n 1 137 ALA n 1 138 ARG n 1 139 GLU n 1 140 PHE n 1 141 SER n 1 142 CYS n 1 143 PRO n 1 144 PHE n 1 145 PHE n 1 146 GLU n 1 147 THR n 1 148 SER n 1 149 ALA n 1 150 ALA n 1 151 TYR n 1 152 ARG n 1 153 TYR n 1 154 TYR n 1 155 ILE n 1 156 ASP n 1 157 ASP n 1 158 VAL n 1 159 PHE n 1 160 HIS n 1 161 ALA n 1 162 LEU n 1 163 VAL n 1 164 ARG n 1 165 GLU n 1 166 ILE n 1 167 ARG n 1 168 ARG n 1 169 LYS n 1 170 GLU n 1 171 LYS n 1 172 GLU n 1 173 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'RIT1, RIBB, RIT, ROC1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 DE3+ RP' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pQTEV _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RIT1_HUMAN _struct_ref.pdbx_db_accession Q92963 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SREYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFII CYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFETSAAYRYYIDDVFHAL VREIRRKEKEA ; _struct_ref.pdbx_align_begin 19 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4KLZ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 173 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q92963 _struct_ref_seq.db_align_beg 19 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 189 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 19 _struct_ref_seq.pdbx_auth_seq_align_end 189 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4KLZ GLY A 1 ? UNP Q92963 ? ? 'expression tag' 17 1 1 4KLZ SER A 2 ? UNP Q92963 ? ? 'expression tag' 18 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4KLZ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_details '11-14% w/v PEG4000, 5-8% v/v Jeffamine M600, imidazole , VAPOR DIFFUSION, SITTING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range 7.0-7.2 # _diffrn.id 1 _diffrn.ambient_temp 99 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'Bruker Platinum 135' _diffrn_detector.pdbx_collection_date 2007-02-27 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator crystal _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54146 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type OTHER _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54146 # _reflns.entry_id 4KLZ _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 40.5 _reflns.d_resolution_high 2.3 _reflns.number_obs 5464 _reflns.number_all 5464 _reflns.percent_possible_obs 98 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.0547 _reflns.pdbx_netI_over_sigmaI 36.45 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 4KLZ _refine.ls_number_reflns_obs 4860 _refine.ls_number_reflns_all 82115 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.5 _refine.ls_d_res_high 2.3 _refine.ls_percent_reflns_obs 98.57 _refine.ls_R_factor_obs 0.19786 _refine.ls_R_factor_all . _refine.ls_R_factor_R_work 0.18538 _refine.ls_R_factor_R_free 0.31099 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.7 _refine.ls_number_reflns_R_free 520 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.935 _refine.correlation_coeff_Fo_to_Fc_free 0.833 _refine.B_iso_mean 15.060 _refine.aniso_B[1][1] 2.07 _refine.aniso_B[2][2] -1.11 _refine.aniso_B[3][3] -0.99 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.12 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'pdb entry 2ery' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.390 _refine.overall_SU_ML 0.285 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 11.230 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1278 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 29 _refine_hist.number_atoms_solvent 18 _refine_hist.number_atoms_total 1325 _refine_hist.d_res_high 2.3 _refine_hist.d_res_low 40.5 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.042 0.022 ? 1345 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.002 0.020 ? 951 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 3.177 1.988 ? 1817 ? 'X-RAY DIFFRACTION' r_angle_other_deg 1.567 3.000 ? 2283 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 12.193 5.000 ? 158 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 37.123 22.429 ? 70 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 23.608 15.000 ? 240 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 21.704 15.000 ? 16 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.181 0.200 ? 194 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.014 0.020 ? 1474 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.004 0.020 ? 306 ? 'X-RAY DIFFRACTION' r_nbd_refined 0.307 0.200 ? 368 ? 'X-RAY DIFFRACTION' r_nbd_other 0.270 0.200 ? 1041 ? 'X-RAY DIFFRACTION' r_nbtor_refined 0.221 0.200 ? 595 ? 'X-RAY DIFFRACTION' r_nbtor_other 0.108 0.200 ? 750 ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined 0.270 0.200 ? 50 ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other 0.012 0.200 ? 1 ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined 0.251 0.200 ? 32 ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other 0.360 0.200 ? 96 ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined 0.446 0.200 ? 9 ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1.678 1.500 ? 975 ? 'X-RAY DIFFRACTION' r_mcbond_other 0.368 1.500 ? 317 ? 'X-RAY DIFFRACTION' r_mcangle_it 2.063 2.000 ? 1261 ? 'X-RAY DIFFRACTION' r_scbond_it 3.337 3.000 ? 661 ? 'X-RAY DIFFRACTION' r_scangle_it 4.403 4.500 ? 554 ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.298 _refine_ls_shell.d_res_low 2.358 _refine_ls_shell.number_reflns_R_work 335 _refine_ls_shell.R_factor_R_work 0.174 _refine_ls_shell.percent_reflns_obs 93.40 _refine_ls_shell.R_factor_R_free 0.417 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 47 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4KLZ _struct.title ;Inhibition of Small GTPases by Stabilization of the GDP Complex, a Novel Approach applied to Rit1, a Target for Rheumatoid Arthritis ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4KLZ _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text 'small GTPase, molecular switch (GTPase), GDP/GTP binding, PROTEIN BINDING, GUANINE NUCLEOTIDE BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 17 ? HIS A 28 ? GLY A 33 HIS A 44 1 ? 12 HELX_P HELX_P2 2 ASP A 88 ? GLU A 94 ? ASP A 104 GLU A 110 1 ? 7 HELX_P HELX_P3 3 GLU A 94 ? ARG A 106 ? GLU A 110 ARG A 122 1 ? 13 HELX_P HELX_P4 4 LEU A 122 ? ARG A 126 ? LEU A 138 ARG A 142 5 ? 5 HELX_P HELX_P5 5 THR A 129 ? PHE A 140 ? THR A 145 PHE A 156 1 ? 12 HELX_P HELX_P6 6 SER A 148 ? ARG A 152 ? SER A 164 ARG A 168 5 ? 5 HELX_P HELX_P7 7 TYR A 154 ? ARG A 167 ? TYR A 170 ARG A 183 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A SER 19 OG ? ? ? 1_555 C MG . MG ? ? A SER 35 A MG 502 1_555 ? ? ? ? ? ? ? 2.427 ? ? metalc2 metalc ? ? B GDP . O2B ? ? ? 1_555 C MG . MG ? ? A GDP 501 A MG 502 1_555 ? ? ? ? ? ? ? 1.992 ? ? metalc3 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 502 A HOH 618 1_555 ? ? ? ? ? ? ? 2.213 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 40 ? ILE A 46 ? ASP A 56 ILE A 62 A 2 ALA A 53 ? ASP A 59 ? ALA A 69 ASP A 75 A 3 TYR A 6 ? LEU A 11 ? TYR A 22 LEU A 27 A 4 GLY A 79 ? SER A 85 ? GLY A 95 SER A 101 A 5 VAL A 113 ? ASN A 118 ? VAL A 129 ASN A 134 A 6 PHE A 144 ? GLU A 146 ? PHE A 160 GLU A 162 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 46 ? N ILE A 62 O ALA A 53 ? O ALA A 69 A 2 3 O ASN A 54 ? O ASN A 70 N TYR A 6 ? N TYR A 22 A 3 4 N VAL A 9 ? N VAL A 25 O GLY A 79 ? O GLY A 95 A 4 5 N TYR A 84 ? N TYR A 100 O ASN A 118 ? O ASN A 134 A 5 6 N GLY A 117 ? N GLY A 133 O PHE A 145 ? O PHE A 161 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GDP 501 ? 17 'BINDING SITE FOR RESIDUE GDP A 501' AC2 Software A MG 502 ? 3 'BINDING SITE FOR RESIDUE MG A 502' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 17 GLY A 15 ? GLY A 31 . ? 1_555 ? 2 AC1 17 VAL A 16 ? VAL A 32 . ? 1_555 ? 3 AC1 17 GLY A 17 ? GLY A 33 . ? 1_555 ? 4 AC1 17 LYS A 18 ? LYS A 34 . ? 1_555 ? 5 AC1 17 SER A 19 ? SER A 35 . ? 1_555 ? 6 AC1 17 ALA A 20 ? ALA A 36 . ? 1_555 ? 7 AC1 17 PHE A 30 ? PHE A 46 . ? 1_555 ? 8 AC1 17 GLU A 32 ? GLU A 48 . ? 1_555 ? 9 AC1 17 ASN A 118 ? ASN A 134 . ? 1_555 ? 10 AC1 17 LYS A 119 ? LYS A 135 . ? 1_555 ? 11 AC1 17 ASP A 121 ? ASP A 137 . ? 1_555 ? 12 AC1 17 LEU A 122 ? LEU A 138 . ? 1_555 ? 13 AC1 17 SER A 148 ? SER A 164 . ? 1_555 ? 14 AC1 17 ALA A 149 ? ALA A 165 . ? 1_555 ? 15 AC1 17 ALA A 150 ? ALA A 166 . ? 1_555 ? 16 AC1 17 MG C . ? MG A 502 . ? 1_555 ? 17 AC1 17 HOH D . ? HOH A 618 . ? 1_555 ? 18 AC2 3 SER A 19 ? SER A 35 . ? 1_555 ? 19 AC2 3 GDP B . ? GDP A 501 . ? 1_555 ? 20 AC2 3 HOH D . ? HOH A 618 . ? 1_555 ? # _database_PDB_matrix.entry_id 4KLZ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4KLZ _atom_sites.fract_transf_matrix[1][1] 0.024827 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002565 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026992 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024679 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 17 ? ? ? A . n A 1 2 SER 2 18 ? ? ? A . n A 1 3 SER 3 19 ? ? ? A . n A 1 4 ARG 4 20 ? ? ? A . n A 1 5 GLU 5 21 21 GLU GLU A . n A 1 6 TYR 6 22 22 TYR TYR A . n A 1 7 LYS 7 23 23 LYS LYS A . n A 1 8 LEU 8 24 24 LEU LEU A . n A 1 9 VAL 9 25 25 VAL VAL A . n A 1 10 MET 10 26 26 MET MET A . n A 1 11 LEU 11 27 27 LEU LEU A . n A 1 12 GLY 12 28 28 GLY GLY A . n A 1 13 ALA 13 29 29 ALA ALA A . n A 1 14 GLY 14 30 30 GLY GLY A . n A 1 15 GLY 15 31 31 GLY GLY A . n A 1 16 VAL 16 32 32 VAL VAL A . n A 1 17 GLY 17 33 33 GLY GLY A . n A 1 18 LYS 18 34 34 LYS LYS A . n A 1 19 SER 19 35 35 SER SER A . n A 1 20 ALA 20 36 36 ALA ALA A . n A 1 21 MET 21 37 37 MET MET A . n A 1 22 THR 22 38 38 THR THR A . n A 1 23 MET 23 39 39 MET MET A . n A 1 24 GLN 24 40 40 GLN GLN A . n A 1 25 PHE 25 41 41 PHE PHE A . n A 1 26 ILE 26 42 42 ILE ILE A . n A 1 27 SER 27 43 43 SER SER A . n A 1 28 HIS 28 44 44 HIS HIS A . n A 1 29 ARG 29 45 45 ARG ARG A . n A 1 30 PHE 30 46 46 PHE PHE A . n A 1 31 PRO 31 47 47 PRO PRO A . n A 1 32 GLU 32 48 48 GLU GLU A . n A 1 33 ASP 33 49 49 ASP ASP A . n A 1 34 HIS 34 50 50 HIS HIS A . n A 1 35 ASP 35 51 51 ASP ASP A . n A 1 36 PRO 36 52 52 PRO PRO A . n A 1 37 THR 37 53 53 THR THR A . n A 1 38 ILE 38 54 54 ILE ILE A . n A 1 39 GLU 39 55 55 GLU GLU A . n A 1 40 ASP 40 56 56 ASP ASP A . n A 1 41 ALA 41 57 57 ALA ALA A . n A 1 42 TYR 42 58 58 TYR TYR A . n A 1 43 LYS 43 59 59 LYS LYS A . n A 1 44 ILE 44 60 60 ILE ILE A . n A 1 45 ARG 45 61 61 ARG ARG A . n A 1 46 ILE 46 62 62 ILE ILE A . n A 1 47 ARG 47 63 63 ARG ARG A . n A 1 48 ILE 48 64 64 ILE ILE A . n A 1 49 ASP 49 65 65 ASP ASP A . n A 1 50 ASP 50 66 66 ASP ASP A . n A 1 51 GLU 51 67 67 GLU GLU A . n A 1 52 PRO 52 68 68 PRO PRO A . n A 1 53 ALA 53 69 69 ALA ALA A . n A 1 54 ASN 54 70 70 ASN ASN A . n A 1 55 LEU 55 71 71 LEU LEU A . n A 1 56 ASP 56 72 72 ASP ASP A . n A 1 57 ILE 57 73 73 ILE ILE A . n A 1 58 LEU 58 74 74 LEU LEU A . n A 1 59 ASP 59 75 75 ASP ASP A . n A 1 60 THR 60 76 76 THR THR A . n A 1 61 ALA 61 77 77 ALA ALA A . n A 1 62 GLY 62 78 78 GLY GLY A . n A 1 63 GLN 63 79 ? ? ? A . n A 1 64 ALA 64 80 ? ? ? A . n A 1 65 GLU 65 81 ? ? ? A . n A 1 66 PHE 66 82 ? ? ? A . n A 1 67 THR 67 83 ? ? ? A . n A 1 68 ALA 68 84 ? ? ? A . n A 1 69 MET 69 85 ? ? ? A . n A 1 70 ARG 70 86 ? ? ? A . n A 1 71 ASP 71 87 ? ? ? A . n A 1 72 GLN 72 88 88 GLN GLN A . n A 1 73 TYR 73 89 89 TYR TYR A . n A 1 74 MET 74 90 90 MET MET A . n A 1 75 ARG 75 91 91 ARG ARG A . n A 1 76 ALA 76 92 92 ALA ALA A . n A 1 77 GLY 77 93 93 GLY GLY A . n A 1 78 GLU 78 94 94 GLU GLU A . n A 1 79 GLY 79 95 95 GLY GLY A . n A 1 80 PHE 80 96 96 PHE PHE A . n A 1 81 ILE 81 97 97 ILE ILE A . n A 1 82 ILE 82 98 98 ILE ILE A . n A 1 83 CYS 83 99 99 CYS CYS A . n A 1 84 TYR 84 100 100 TYR TYR A . n A 1 85 SER 85 101 101 SER SER A . n A 1 86 ILE 86 102 102 ILE ILE A . n A 1 87 THR 87 103 103 THR THR A . n A 1 88 ASP 88 104 104 ASP ASP A . n A 1 89 ARG 89 105 105 ARG ARG A . n A 1 90 ARG 90 106 106 ARG ARG A . n A 1 91 SER 91 107 107 SER SER A . n A 1 92 PHE 92 108 108 PHE PHE A . n A 1 93 HIS 93 109 109 HIS HIS A . n A 1 94 GLU 94 110 110 GLU GLU A . n A 1 95 VAL 95 111 111 VAL VAL A . n A 1 96 ARG 96 112 112 ARG ARG A . n A 1 97 GLU 97 113 113 GLU GLU A . n A 1 98 PHE 98 114 114 PHE PHE A . n A 1 99 LYS 99 115 115 LYS LYS A . n A 1 100 GLN 100 116 116 GLN GLN A . n A 1 101 LEU 101 117 117 LEU LEU A . n A 1 102 ILE 102 118 118 ILE ILE A . n A 1 103 TYR 103 119 119 TYR TYR A . n A 1 104 ARG 104 120 120 ARG ARG A . n A 1 105 VAL 105 121 121 VAL VAL A . n A 1 106 ARG 106 122 122 ARG ARG A . n A 1 107 ARG 107 123 123 ARG ARG A . n A 1 108 THR 108 124 124 THR THR A . n A 1 109 ASP 109 125 125 ASP ASP A . n A 1 110 ASP 110 126 126 ASP ASP A . n A 1 111 THR 111 127 127 THR THR A . n A 1 112 PRO 112 128 128 PRO PRO A . n A 1 113 VAL 113 129 129 VAL VAL A . n A 1 114 VAL 114 130 130 VAL VAL A . n A 1 115 LEU 115 131 131 LEU LEU A . n A 1 116 VAL 116 132 132 VAL VAL A . n A 1 117 GLY 117 133 133 GLY GLY A . n A 1 118 ASN 118 134 134 ASN ASN A . n A 1 119 LYS 119 135 135 LYS LYS A . n A 1 120 SER 120 136 136 SER SER A . n A 1 121 ASP 121 137 137 ASP ASP A . n A 1 122 LEU 122 138 138 LEU LEU A . n A 1 123 LYS 123 139 139 LYS LYS A . n A 1 124 GLN 124 140 140 GLN GLN A . n A 1 125 LEU 125 141 141 LEU LEU A . n A 1 126 ARG 126 142 142 ARG ARG A . n A 1 127 GLN 127 143 143 GLN GLN A . n A 1 128 VAL 128 144 144 VAL VAL A . n A 1 129 THR 129 145 145 THR THR A . n A 1 130 LYS 130 146 146 LYS LYS A . n A 1 131 GLU 131 147 147 GLU GLU A . n A 1 132 GLU 132 148 148 GLU GLU A . n A 1 133 GLY 133 149 149 GLY GLY A . n A 1 134 LEU 134 150 150 LEU LEU A . n A 1 135 ALA 135 151 151 ALA ALA A . n A 1 136 LEU 136 152 152 LEU LEU A . n A 1 137 ALA 137 153 153 ALA ALA A . n A 1 138 ARG 138 154 154 ARG ARG A . n A 1 139 GLU 139 155 155 GLU GLU A . n A 1 140 PHE 140 156 156 PHE PHE A . n A 1 141 SER 141 157 157 SER SER A . n A 1 142 CYS 142 158 158 CYS CYS A . n A 1 143 PRO 143 159 159 PRO PRO A . n A 1 144 PHE 144 160 160 PHE PHE A . n A 1 145 PHE 145 161 161 PHE PHE A . n A 1 146 GLU 146 162 162 GLU GLU A . n A 1 147 THR 147 163 163 THR THR A . n A 1 148 SER 148 164 164 SER SER A . n A 1 149 ALA 149 165 165 ALA ALA A . n A 1 150 ALA 150 166 166 ALA ALA A . n A 1 151 TYR 151 167 167 TYR TYR A . n A 1 152 ARG 152 168 168 ARG ARG A . n A 1 153 TYR 153 169 169 TYR TYR A . n A 1 154 TYR 154 170 170 TYR TYR A . n A 1 155 ILE 155 171 171 ILE ILE A . n A 1 156 ASP 156 172 172 ASP ASP A . n A 1 157 ASP 157 173 173 ASP ASP A . n A 1 158 VAL 158 174 174 VAL VAL A . n A 1 159 PHE 159 175 175 PHE PHE A . n A 1 160 HIS 160 176 176 HIS HIS A . n A 1 161 ALA 161 177 177 ALA ALA A . n A 1 162 LEU 162 178 178 LEU LEU A . n A 1 163 VAL 163 179 179 VAL VAL A . n A 1 164 ARG 164 180 180 ARG ARG A . n A 1 165 GLU 165 181 181 GLU GLU A . n A 1 166 ILE 166 182 182 ILE ILE A . n A 1 167 ARG 167 183 183 ARG ARG A . n A 1 168 ARG 168 184 184 ARG ARG A . n A 1 169 LYS 169 185 185 LYS LYS A . n A 1 170 GLU 170 186 ? ? ? A . n A 1 171 LYS 171 187 ? ? ? A . n A 1 172 GLU 172 188 ? ? ? A . n A 1 173 ALA 173 189 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDP 1 501 501 GDP GDP A . C 3 MG 1 502 502 MG MG A . D 4 HOH 1 601 4 HOH HOH A . D 4 HOH 2 602 5 HOH HOH A . D 4 HOH 3 603 6 HOH HOH A . D 4 HOH 4 604 7 HOH HOH A . D 4 HOH 5 605 8 HOH HOH A . D 4 HOH 6 606 9 HOH HOH A . D 4 HOH 7 607 10 HOH HOH A . D 4 HOH 8 608 11 HOH HOH A . D 4 HOH 9 609 12 HOH HOH A . D 4 HOH 10 610 13 HOH HOH A . D 4 HOH 11 611 14 HOH HOH A . D 4 HOH 12 612 15 HOH HOH A . D 4 HOH 13 613 16 HOH HOH A . D 4 HOH 14 614 17 HOH HOH A . D 4 HOH 15 615 18 HOH HOH A . D 4 HOH 16 616 19 HOH HOH A . D 4 HOH 17 617 20 HOH HOH A . D 4 HOH 18 618 21 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG ? A SER 19 ? A SER 35 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O2B ? B GDP . ? A GDP 501 ? 1_555 93.8 ? 2 OG ? A SER 19 ? A SER 35 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? D HOH . ? A HOH 618 ? 1_555 67.8 ? 3 O2B ? B GDP . ? A GDP 501 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? D HOH . ? A HOH 618 ? 1_555 86.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-09-17 2 'Structure model' 1 1 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' pdbx_struct_conn_angle 6 2 'Structure model' struct_conn 7 2 'Structure model' struct_ref_seq_dif 8 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 2 'Structure model' '_pdbx_struct_conn_angle.value' 16 2 'Structure model' '_struct_conn.pdbx_dist_value' 17 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 24 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 26 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 27 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 28 2 'Structure model' '_struct_ref_seq_dif.details' 29 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 30 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 31 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal 'PROTEUM PLUS' 'data collection' PLUS ? 1 Coot 'model building' . ? 2 REFMAC refinement 5.2.0019 ? 3 'PROTEUM PLUS' 'data reduction' PLUS ? 4 'PROTEUM PLUS' 'data scaling' PLUS ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A ASP 66 ? ? N A PRO 68 ? ? 1.97 2 1 NZ A LYS 23 ? ? O A ALA 92 ? ? 2.08 3 1 OH A TYR 169 ? ? O A HOH 616 ? ? 2.16 4 1 O A GLU 48 ? ? "O2'" A GDP 501 ? ? 2.16 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A GLY 78 ? ? 1_555 OH A TYR 167 ? ? 2_655 1.88 2 1 NH2 A ARG 45 ? ? 1_555 OD1 A ASP 104 ? ? 2_645 2.13 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CG A GLU 48 ? ? CD A GLU 48 ? ? 1.614 1.515 0.099 0.015 N 2 1 CB A VAL 130 ? ? CG1 A VAL 130 ? ? 1.384 1.524 -0.140 0.021 N 3 1 CB A VAL 132 ? ? CG2 A VAL 132 ? ? 1.666 1.524 0.142 0.021 N 4 1 CG A ARG 142 ? ? CD A ARG 142 ? ? 1.774 1.515 0.259 0.025 N 5 1 CB A CYS 158 ? ? SG A CYS 158 ? ? 1.423 1.812 -0.389 0.016 N 6 1 CE1 A TYR 169 ? ? CZ A TYR 169 ? ? 1.293 1.381 -0.088 0.013 N 7 1 CZ A TYR 170 ? ? CE2 A TYR 170 ? ? 1.294 1.381 -0.087 0.013 N 8 1 CG A GLU 181 ? ? CD A GLU 181 ? ? 1.412 1.515 -0.103 0.015 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CG A MET 26 ? ? SD A MET 26 ? ? CE A MET 26 ? ? 110.20 100.20 10.00 1.60 N 2 1 NE A ARG 45 ? ? CZ A ARG 45 ? ? NH1 A ARG 45 ? ? 126.64 120.30 6.34 0.50 N 3 1 NE A ARG 45 ? ? CZ A ARG 45 ? ? NH2 A ARG 45 ? ? 114.51 120.30 -5.79 0.50 N 4 1 CB A ASP 72 ? ? CG A ASP 72 ? ? OD1 A ASP 72 ? ? 129.91 118.30 11.61 0.90 N 5 1 CB A ASP 72 ? ? CG A ASP 72 ? ? OD2 A ASP 72 ? ? 108.54 118.30 -9.76 0.90 N 6 1 NE A ARG 91 ? ? CZ A ARG 91 ? ? NH1 A ARG 91 ? ? 123.67 120.30 3.37 0.50 N 7 1 NE A ARG 106 ? ? CZ A ARG 106 ? ? NH1 A ARG 106 ? ? 116.46 120.30 -3.84 0.50 N 8 1 NE A ARG 122 ? ? CZ A ARG 122 ? ? NH1 A ARG 122 ? ? 124.61 120.30 4.31 0.50 N 9 1 NE A ARG 122 ? ? CZ A ARG 122 ? ? NH2 A ARG 122 ? ? 116.88 120.30 -3.42 0.50 N 10 1 CA A LEU 141 ? ? CB A LEU 141 ? ? CG A LEU 141 ? ? 132.73 115.30 17.43 2.30 N 11 1 NE A ARG 142 ? ? CZ A ARG 142 ? ? NH1 A ARG 142 ? ? 124.01 120.30 3.71 0.50 N 12 1 NE A ARG 142 ? ? CZ A ARG 142 ? ? NH2 A ARG 142 ? ? 115.72 120.30 -4.58 0.50 N 13 1 CA A ARG 154 ? ? CB A ARG 154 ? ? CG A ARG 154 ? ? 128.82 113.40 15.42 2.20 N 14 1 NE A ARG 154 ? ? CZ A ARG 154 ? ? NH1 A ARG 154 ? ? 124.91 120.30 4.61 0.50 N 15 1 N A CYS 158 ? ? CA A CYS 158 ? ? CB A CYS 158 ? ? 98.07 110.60 -12.53 1.80 N 16 1 OE1 A GLU 181 ? ? CD A GLU 181 ? ? OE2 A GLU 181 ? ? 131.34 123.30 8.04 1.20 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 43 ? ? -145.91 24.32 2 1 ASP A 65 ? ? 31.45 -42.34 3 1 ASP A 66 ? ? -171.35 -58.51 4 1 GLU A 67 ? ? 2.71 55.74 5 1 ALA A 77 ? ? -100.08 65.85 6 1 TYR A 89 ? ? -61.69 17.21 7 1 VAL A 121 ? ? -96.83 -78.55 8 1 ARG A 123 ? ? 90.65 64.26 9 1 THR A 124 ? ? -161.40 -164.31 10 1 ASP A 126 ? ? -151.89 44.65 11 1 LYS A 135 ? ? 74.10 33.70 12 1 SER A 157 ? ? 35.13 89.96 13 1 ARG A 168 ? ? 35.60 56.87 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 ASP A 65 ? ? ASP A 66 ? ? 135.93 2 1 ALA A 77 ? ? GLY A 78 ? ? 146.78 3 1 PHE A 96 ? ? ILE A 97 ? ? 147.77 4 1 PHE A 156 ? ? SER A 157 ? ? -149.70 5 1 SER A 157 ? ? CYS A 158 ? ? -144.37 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 17 ? A GLY 1 2 1 Y 1 A SER 18 ? A SER 2 3 1 Y 1 A SER 19 ? A SER 3 4 1 Y 1 A ARG 20 ? A ARG 4 5 1 Y 1 A GLN 79 ? A GLN 63 6 1 Y 1 A ALA 80 ? A ALA 64 7 1 Y 1 A GLU 81 ? A GLU 65 8 1 Y 1 A PHE 82 ? A PHE 66 9 1 Y 1 A THR 83 ? A THR 67 10 1 Y 1 A ALA 84 ? A ALA 68 11 1 Y 1 A MET 85 ? A MET 69 12 1 Y 1 A ARG 86 ? A ARG 70 13 1 Y 1 A ASP 87 ? A ASP 71 14 1 Y 1 A GLU 186 ? A GLU 170 15 1 Y 1 A LYS 187 ? A LYS 171 16 1 Y 1 A GLU 188 ? A GLU 172 17 1 Y 1 A ALA 189 ? A ALA 173 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GDP PB P N N 88 GDP O1B O N N 89 GDP O2B O N N 90 GDP O3B O N N 91 GDP O3A O N N 92 GDP PA P N N 93 GDP O1A O N N 94 GDP O2A O N N 95 GDP "O5'" O N N 96 GDP "C5'" C N N 97 GDP "C4'" C N R 98 GDP "O4'" O N N 99 GDP "C3'" C N S 100 GDP "O3'" O N N 101 GDP "C2'" C N R 102 GDP "O2'" O N N 103 GDP "C1'" C N R 104 GDP N9 N Y N 105 GDP C8 C Y N 106 GDP N7 N Y N 107 GDP C5 C Y N 108 GDP C6 C N N 109 GDP O6 O N N 110 GDP N1 N N N 111 GDP C2 C N N 112 GDP N2 N N N 113 GDP N3 N N N 114 GDP C4 C Y N 115 GDP HOB2 H N N 116 GDP HOB3 H N N 117 GDP HOA2 H N N 118 GDP "H5'" H N N 119 GDP "H5''" H N N 120 GDP "H4'" H N N 121 GDP "H3'" H N N 122 GDP "HO3'" H N N 123 GDP "H2'" H N N 124 GDP "HO2'" H N N 125 GDP "H1'" H N N 126 GDP H8 H N N 127 GDP HN1 H N N 128 GDP HN21 H N N 129 GDP HN22 H N N 130 GLN N N N N 131 GLN CA C N S 132 GLN C C N N 133 GLN O O N N 134 GLN CB C N N 135 GLN CG C N N 136 GLN CD C N N 137 GLN OE1 O N N 138 GLN NE2 N N N 139 GLN OXT O N N 140 GLN H H N N 141 GLN H2 H N N 142 GLN HA H N N 143 GLN HB2 H N N 144 GLN HB3 H N N 145 GLN HG2 H N N 146 GLN HG3 H N N 147 GLN HE21 H N N 148 GLN HE22 H N N 149 GLN HXT H N N 150 GLU N N N N 151 GLU CA C N S 152 GLU C C N N 153 GLU O O N N 154 GLU CB C N N 155 GLU CG C N N 156 GLU CD C N N 157 GLU OE1 O N N 158 GLU OE2 O N N 159 GLU OXT O N N 160 GLU H H N N 161 GLU H2 H N N 162 GLU HA H N N 163 GLU HB2 H N N 164 GLU HB3 H N N 165 GLU HG2 H N N 166 GLU HG3 H N N 167 GLU HE2 H N N 168 GLU HXT H N N 169 GLY N N N N 170 GLY CA C N N 171 GLY C C N N 172 GLY O O N N 173 GLY OXT O N N 174 GLY H H N N 175 GLY H2 H N N 176 GLY HA2 H N N 177 GLY HA3 H N N 178 GLY HXT H N N 179 HIS N N N N 180 HIS CA C N S 181 HIS C C N N 182 HIS O O N N 183 HIS CB C N N 184 HIS CG C Y N 185 HIS ND1 N Y N 186 HIS CD2 C Y N 187 HIS CE1 C Y N 188 HIS NE2 N Y N 189 HIS OXT O N N 190 HIS H H N N 191 HIS H2 H N N 192 HIS HA H N N 193 HIS HB2 H N N 194 HIS HB3 H N N 195 HIS HD1 H N N 196 HIS HD2 H N N 197 HIS HE1 H N N 198 HIS HE2 H N N 199 HIS HXT H N N 200 HOH O O N N 201 HOH H1 H N N 202 HOH H2 H N N 203 ILE N N N N 204 ILE CA C N S 205 ILE C C N N 206 ILE O O N N 207 ILE CB C N S 208 ILE CG1 C N N 209 ILE CG2 C N N 210 ILE CD1 C N N 211 ILE OXT O N N 212 ILE H H N N 213 ILE H2 H N N 214 ILE HA H N N 215 ILE HB H N N 216 ILE HG12 H N N 217 ILE HG13 H N N 218 ILE HG21 H N N 219 ILE HG22 H N N 220 ILE HG23 H N N 221 ILE HD11 H N N 222 ILE HD12 H N N 223 ILE HD13 H N N 224 ILE HXT H N N 225 LEU N N N N 226 LEU CA C N S 227 LEU C C N N 228 LEU O O N N 229 LEU CB C N N 230 LEU CG C N N 231 LEU CD1 C N N 232 LEU CD2 C N N 233 LEU OXT O N N 234 LEU H H N N 235 LEU H2 H N N 236 LEU HA H N N 237 LEU HB2 H N N 238 LEU HB3 H N N 239 LEU HG H N N 240 LEU HD11 H N N 241 LEU HD12 H N N 242 LEU HD13 H N N 243 LEU HD21 H N N 244 LEU HD22 H N N 245 LEU HD23 H N N 246 LEU HXT H N N 247 LYS N N N N 248 LYS CA C N S 249 LYS C C N N 250 LYS O O N N 251 LYS CB C N N 252 LYS CG C N N 253 LYS CD C N N 254 LYS CE C N N 255 LYS NZ N N N 256 LYS OXT O N N 257 LYS H H N N 258 LYS H2 H N N 259 LYS HA H N N 260 LYS HB2 H N N 261 LYS HB3 H N N 262 LYS HG2 H N N 263 LYS HG3 H N N 264 LYS HD2 H N N 265 LYS HD3 H N N 266 LYS HE2 H N N 267 LYS HE3 H N N 268 LYS HZ1 H N N 269 LYS HZ2 H N N 270 LYS HZ3 H N N 271 LYS HXT H N N 272 MET N N N N 273 MET CA C N S 274 MET C C N N 275 MET O O N N 276 MET CB C N N 277 MET CG C N N 278 MET SD S N N 279 MET CE C N N 280 MET OXT O N N 281 MET H H N N 282 MET H2 H N N 283 MET HA H N N 284 MET HB2 H N N 285 MET HB3 H N N 286 MET HG2 H N N 287 MET HG3 H N N 288 MET HE1 H N N 289 MET HE2 H N N 290 MET HE3 H N N 291 MET HXT H N N 292 MG MG MG N N 293 PHE N N N N 294 PHE CA C N S 295 PHE C C N N 296 PHE O O N N 297 PHE CB C N N 298 PHE CG C Y N 299 PHE CD1 C Y N 300 PHE CD2 C Y N 301 PHE CE1 C Y N 302 PHE CE2 C Y N 303 PHE CZ C Y N 304 PHE OXT O N N 305 PHE H H N N 306 PHE H2 H N N 307 PHE HA H N N 308 PHE HB2 H N N 309 PHE HB3 H N N 310 PHE HD1 H N N 311 PHE HD2 H N N 312 PHE HE1 H N N 313 PHE HE2 H N N 314 PHE HZ H N N 315 PHE HXT H N N 316 PRO N N N N 317 PRO CA C N S 318 PRO C C N N 319 PRO O O N N 320 PRO CB C N N 321 PRO CG C N N 322 PRO CD C N N 323 PRO OXT O N N 324 PRO H H N N 325 PRO HA H N N 326 PRO HB2 H N N 327 PRO HB3 H N N 328 PRO HG2 H N N 329 PRO HG3 H N N 330 PRO HD2 H N N 331 PRO HD3 H N N 332 PRO HXT H N N 333 SER N N N N 334 SER CA C N S 335 SER C C N N 336 SER O O N N 337 SER CB C N N 338 SER OG O N N 339 SER OXT O N N 340 SER H H N N 341 SER H2 H N N 342 SER HA H N N 343 SER HB2 H N N 344 SER HB3 H N N 345 SER HG H N N 346 SER HXT H N N 347 THR N N N N 348 THR CA C N S 349 THR C C N N 350 THR O O N N 351 THR CB C N R 352 THR OG1 O N N 353 THR CG2 C N N 354 THR OXT O N N 355 THR H H N N 356 THR H2 H N N 357 THR HA H N N 358 THR HB H N N 359 THR HG1 H N N 360 THR HG21 H N N 361 THR HG22 H N N 362 THR HG23 H N N 363 THR HXT H N N 364 TYR N N N N 365 TYR CA C N S 366 TYR C C N N 367 TYR O O N N 368 TYR CB C N N 369 TYR CG C Y N 370 TYR CD1 C Y N 371 TYR CD2 C Y N 372 TYR CE1 C Y N 373 TYR CE2 C Y N 374 TYR CZ C Y N 375 TYR OH O N N 376 TYR OXT O N N 377 TYR H H N N 378 TYR H2 H N N 379 TYR HA H N N 380 TYR HB2 H N N 381 TYR HB3 H N N 382 TYR HD1 H N N 383 TYR HD2 H N N 384 TYR HE1 H N N 385 TYR HE2 H N N 386 TYR HH H N N 387 TYR HXT H N N 388 VAL N N N N 389 VAL CA C N S 390 VAL C C N N 391 VAL O O N N 392 VAL CB C N N 393 VAL CG1 C N N 394 VAL CG2 C N N 395 VAL OXT O N N 396 VAL H H N N 397 VAL H2 H N N 398 VAL HA H N N 399 VAL HB H N N 400 VAL HG11 H N N 401 VAL HG12 H N N 402 VAL HG13 H N N 403 VAL HG21 H N N 404 VAL HG22 H N N 405 VAL HG23 H N N 406 VAL HXT H N N 407 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GDP PB O1B doub N N 83 GDP PB O2B sing N N 84 GDP PB O3B sing N N 85 GDP PB O3A sing N N 86 GDP O2B HOB2 sing N N 87 GDP O3B HOB3 sing N N 88 GDP O3A PA sing N N 89 GDP PA O1A doub N N 90 GDP PA O2A sing N N 91 GDP PA "O5'" sing N N 92 GDP O2A HOA2 sing N N 93 GDP "O5'" "C5'" sing N N 94 GDP "C5'" "C4'" sing N N 95 GDP "C5'" "H5'" sing N N 96 GDP "C5'" "H5''" sing N N 97 GDP "C4'" "O4'" sing N N 98 GDP "C4'" "C3'" sing N N 99 GDP "C4'" "H4'" sing N N 100 GDP "O4'" "C1'" sing N N 101 GDP "C3'" "O3'" sing N N 102 GDP "C3'" "C2'" sing N N 103 GDP "C3'" "H3'" sing N N 104 GDP "O3'" "HO3'" sing N N 105 GDP "C2'" "O2'" sing N N 106 GDP "C2'" "C1'" sing N N 107 GDP "C2'" "H2'" sing N N 108 GDP "O2'" "HO2'" sing N N 109 GDP "C1'" N9 sing N N 110 GDP "C1'" "H1'" sing N N 111 GDP N9 C8 sing Y N 112 GDP N9 C4 sing Y N 113 GDP C8 N7 doub Y N 114 GDP C8 H8 sing N N 115 GDP N7 C5 sing Y N 116 GDP C5 C6 sing N N 117 GDP C5 C4 doub Y N 118 GDP C6 O6 doub N N 119 GDP C6 N1 sing N N 120 GDP N1 C2 sing N N 121 GDP N1 HN1 sing N N 122 GDP C2 N2 sing N N 123 GDP C2 N3 doub N N 124 GDP N2 HN21 sing N N 125 GDP N2 HN22 sing N N 126 GDP N3 C4 sing N N 127 GLN N CA sing N N 128 GLN N H sing N N 129 GLN N H2 sing N N 130 GLN CA C sing N N 131 GLN CA CB sing N N 132 GLN CA HA sing N N 133 GLN C O doub N N 134 GLN C OXT sing N N 135 GLN CB CG sing N N 136 GLN CB HB2 sing N N 137 GLN CB HB3 sing N N 138 GLN CG CD sing N N 139 GLN CG HG2 sing N N 140 GLN CG HG3 sing N N 141 GLN CD OE1 doub N N 142 GLN CD NE2 sing N N 143 GLN NE2 HE21 sing N N 144 GLN NE2 HE22 sing N N 145 GLN OXT HXT sing N N 146 GLU N CA sing N N 147 GLU N H sing N N 148 GLU N H2 sing N N 149 GLU CA C sing N N 150 GLU CA CB sing N N 151 GLU CA HA sing N N 152 GLU C O doub N N 153 GLU C OXT sing N N 154 GLU CB CG sing N N 155 GLU CB HB2 sing N N 156 GLU CB HB3 sing N N 157 GLU CG CD sing N N 158 GLU CG HG2 sing N N 159 GLU CG HG3 sing N N 160 GLU CD OE1 doub N N 161 GLU CD OE2 sing N N 162 GLU OE2 HE2 sing N N 163 GLU OXT HXT sing N N 164 GLY N CA sing N N 165 GLY N H sing N N 166 GLY N H2 sing N N 167 GLY CA C sing N N 168 GLY CA HA2 sing N N 169 GLY CA HA3 sing N N 170 GLY C O doub N N 171 GLY C OXT sing N N 172 GLY OXT HXT sing N N 173 HIS N CA sing N N 174 HIS N H sing N N 175 HIS N H2 sing N N 176 HIS CA C sing N N 177 HIS CA CB sing N N 178 HIS CA HA sing N N 179 HIS C O doub N N 180 HIS C OXT sing N N 181 HIS CB CG sing N N 182 HIS CB HB2 sing N N 183 HIS CB HB3 sing N N 184 HIS CG ND1 sing Y N 185 HIS CG CD2 doub Y N 186 HIS ND1 CE1 doub Y N 187 HIS ND1 HD1 sing N N 188 HIS CD2 NE2 sing Y N 189 HIS CD2 HD2 sing N N 190 HIS CE1 NE2 sing Y N 191 HIS CE1 HE1 sing N N 192 HIS NE2 HE2 sing N N 193 HIS OXT HXT sing N N 194 HOH O H1 sing N N 195 HOH O H2 sing N N 196 ILE N CA sing N N 197 ILE N H sing N N 198 ILE N H2 sing N N 199 ILE CA C sing N N 200 ILE CA CB sing N N 201 ILE CA HA sing N N 202 ILE C O doub N N 203 ILE C OXT sing N N 204 ILE CB CG1 sing N N 205 ILE CB CG2 sing N N 206 ILE CB HB sing N N 207 ILE CG1 CD1 sing N N 208 ILE CG1 HG12 sing N N 209 ILE CG1 HG13 sing N N 210 ILE CG2 HG21 sing N N 211 ILE CG2 HG22 sing N N 212 ILE CG2 HG23 sing N N 213 ILE CD1 HD11 sing N N 214 ILE CD1 HD12 sing N N 215 ILE CD1 HD13 sing N N 216 ILE OXT HXT sing N N 217 LEU N CA sing N N 218 LEU N H sing N N 219 LEU N H2 sing N N 220 LEU CA C sing N N 221 LEU CA CB sing N N 222 LEU CA HA sing N N 223 LEU C O doub N N 224 LEU C OXT sing N N 225 LEU CB CG sing N N 226 LEU CB HB2 sing N N 227 LEU CB HB3 sing N N 228 LEU CG CD1 sing N N 229 LEU CG CD2 sing N N 230 LEU CG HG sing N N 231 LEU CD1 HD11 sing N N 232 LEU CD1 HD12 sing N N 233 LEU CD1 HD13 sing N N 234 LEU CD2 HD21 sing N N 235 LEU CD2 HD22 sing N N 236 LEU CD2 HD23 sing N N 237 LEU OXT HXT sing N N 238 LYS N CA sing N N 239 LYS N H sing N N 240 LYS N H2 sing N N 241 LYS CA C sing N N 242 LYS CA CB sing N N 243 LYS CA HA sing N N 244 LYS C O doub N N 245 LYS C OXT sing N N 246 LYS CB CG sing N N 247 LYS CB HB2 sing N N 248 LYS CB HB3 sing N N 249 LYS CG CD sing N N 250 LYS CG HG2 sing N N 251 LYS CG HG3 sing N N 252 LYS CD CE sing N N 253 LYS CD HD2 sing N N 254 LYS CD HD3 sing N N 255 LYS CE NZ sing N N 256 LYS CE HE2 sing N N 257 LYS CE HE3 sing N N 258 LYS NZ HZ1 sing N N 259 LYS NZ HZ2 sing N N 260 LYS NZ HZ3 sing N N 261 LYS OXT HXT sing N N 262 MET N CA sing N N 263 MET N H sing N N 264 MET N H2 sing N N 265 MET CA C sing N N 266 MET CA CB sing N N 267 MET CA HA sing N N 268 MET C O doub N N 269 MET C OXT sing N N 270 MET CB CG sing N N 271 MET CB HB2 sing N N 272 MET CB HB3 sing N N 273 MET CG SD sing N N 274 MET CG HG2 sing N N 275 MET CG HG3 sing N N 276 MET SD CE sing N N 277 MET CE HE1 sing N N 278 MET CE HE2 sing N N 279 MET CE HE3 sing N N 280 MET OXT HXT sing N N 281 PHE N CA sing N N 282 PHE N H sing N N 283 PHE N H2 sing N N 284 PHE CA C sing N N 285 PHE CA CB sing N N 286 PHE CA HA sing N N 287 PHE C O doub N N 288 PHE C OXT sing N N 289 PHE CB CG sing N N 290 PHE CB HB2 sing N N 291 PHE CB HB3 sing N N 292 PHE CG CD1 doub Y N 293 PHE CG CD2 sing Y N 294 PHE CD1 CE1 sing Y N 295 PHE CD1 HD1 sing N N 296 PHE CD2 CE2 doub Y N 297 PHE CD2 HD2 sing N N 298 PHE CE1 CZ doub Y N 299 PHE CE1 HE1 sing N N 300 PHE CE2 CZ sing Y N 301 PHE CE2 HE2 sing N N 302 PHE CZ HZ sing N N 303 PHE OXT HXT sing N N 304 PRO N CA sing N N 305 PRO N CD sing N N 306 PRO N H sing N N 307 PRO CA C sing N N 308 PRO CA CB sing N N 309 PRO CA HA sing N N 310 PRO C O doub N N 311 PRO C OXT sing N N 312 PRO CB CG sing N N 313 PRO CB HB2 sing N N 314 PRO CB HB3 sing N N 315 PRO CG CD sing N N 316 PRO CG HG2 sing N N 317 PRO CG HG3 sing N N 318 PRO CD HD2 sing N N 319 PRO CD HD3 sing N N 320 PRO OXT HXT sing N N 321 SER N CA sing N N 322 SER N H sing N N 323 SER N H2 sing N N 324 SER CA C sing N N 325 SER CA CB sing N N 326 SER CA HA sing N N 327 SER C O doub N N 328 SER C OXT sing N N 329 SER CB OG sing N N 330 SER CB HB2 sing N N 331 SER CB HB3 sing N N 332 SER OG HG sing N N 333 SER OXT HXT sing N N 334 THR N CA sing N N 335 THR N H sing N N 336 THR N H2 sing N N 337 THR CA C sing N N 338 THR CA CB sing N N 339 THR CA HA sing N N 340 THR C O doub N N 341 THR C OXT sing N N 342 THR CB OG1 sing N N 343 THR CB CG2 sing N N 344 THR CB HB sing N N 345 THR OG1 HG1 sing N N 346 THR CG2 HG21 sing N N 347 THR CG2 HG22 sing N N 348 THR CG2 HG23 sing N N 349 THR OXT HXT sing N N 350 TYR N CA sing N N 351 TYR N H sing N N 352 TYR N H2 sing N N 353 TYR CA C sing N N 354 TYR CA CB sing N N 355 TYR CA HA sing N N 356 TYR C O doub N N 357 TYR C OXT sing N N 358 TYR CB CG sing N N 359 TYR CB HB2 sing N N 360 TYR CB HB3 sing N N 361 TYR CG CD1 doub Y N 362 TYR CG CD2 sing Y N 363 TYR CD1 CE1 sing Y N 364 TYR CD1 HD1 sing N N 365 TYR CD2 CE2 doub Y N 366 TYR CD2 HD2 sing N N 367 TYR CE1 CZ doub Y N 368 TYR CE1 HE1 sing N N 369 TYR CE2 CZ sing Y N 370 TYR CE2 HE2 sing N N 371 TYR CZ OH sing N N 372 TYR OH HH sing N N 373 TYR OXT HXT sing N N 374 VAL N CA sing N N 375 VAL N H sing N N 376 VAL N H2 sing N N 377 VAL CA C sing N N 378 VAL CA CB sing N N 379 VAL CA HA sing N N 380 VAL C O doub N N 381 VAL C OXT sing N N 382 VAL CB CG1 sing N N 383 VAL CB CG2 sing N N 384 VAL CB HB sing N N 385 VAL CG1 HG11 sing N N 386 VAL CG1 HG12 sing N N 387 VAL CG1 HG13 sing N N 388 VAL CG2 HG21 sing N N 389 VAL CG2 HG22 sing N N 390 VAL CG2 HG23 sing N N 391 VAL OXT HXT sing N N 392 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "GUANOSINE-5'-DIPHOSPHATE" GDP 3 'MAGNESIUM ION' MG 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2ERY _pdbx_initial_refinement_model.details 'pdb entry 2ery' #