HEADER TRANSFERASE 12-MAY-13 4KOY TITLE CRYSTAL STRUCTURE OF A GNAT SUPERFAMILY ACETYLTRANSFERASE PA4794 IN TITLE 2 COMPLEX WITH CEPHALOSPORIN C COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: PAO1; SOURCE 5 GENE: PA4794; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: P11 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS, MCSG, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.A.MAJOREK,P.J.POREBSKI,M.CHRUSZCZ,M.CYMBOROWSKI,A.JOACHIMIAK, AUTHOR 2 W.MINOR,MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 6 20-SEP-23 4KOY 1 REMARK REVDAT 5 13-APR-22 4KOY 1 AUTHOR JRNL REMARK SEQADV REVDAT 5 2 1 LINK REVDAT 4 15-NOV-17 4KOY 1 REMARK REVDAT 3 13-NOV-13 4KOY 1 JRNL REVDAT 2 18-SEP-13 4KOY 1 JRNL REVDAT 1 05-JUN-13 4KOY 0 JRNL AUTH K.A.MAJOREK,M.L.KUHN,M.CHRUSZCZ,W.F.ANDERSON,W.MINOR JRNL TITL STRUCTURAL, FUNCTIONAL, AND INHIBITION STUDIES OF A JRNL TITL 2 GCN5-RELATED N-ACETYLTRANSFERASE (GNAT) SUPERFAMILY PROTEIN JRNL TITL 3 PA4794: A NEW C-TERMINAL LYSINE PROTEIN ACETYLTRANSFERASE JRNL TITL 4 FROM PSEUDOMONAS AERUGINOSA. JRNL REF J.BIOL.CHEM. V. 288 30223 2013 JRNL REFN ISSN 0021-9258 JRNL PMID 24003232 JRNL DOI 10.1074/JBC.M113.501353 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.94 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 33120 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.148 REMARK 3 R VALUE (WORKING SET) : 0.146 REMARK 3 FREE R VALUE : 0.173 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1754 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.44 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2386 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.46 REMARK 3 BIN R VALUE (WORKING SET) : 0.2420 REMARK 3 BIN FREE R VALUE SET COUNT : 105 REMARK 3 BIN FREE R VALUE : 0.2750 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1239 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 78 REMARK 3 SOLVENT ATOMS : 229 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.46000 REMARK 3 B22 (A**2) : -0.34000 REMARK 3 B33 (A**2) : 0.79000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.053 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.056 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.975 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.968 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1465 ; 0.019 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1414 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1978 ; 1.856 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3230 ; 3.555 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 184 ; 5.604 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 71 ;34.566 ;22.676 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 230 ;12.473 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;16.119 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 204 ; 0.112 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1696 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 364 ; 0.020 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 34 REMARK 3 ORIGIN FOR THE GROUP (A): -14.7110 14.4570 -18.4020 REMARK 3 T TENSOR REMARK 3 T11: 0.1085 T22: 0.1030 REMARK 3 T33: 0.0375 T12: 0.0157 REMARK 3 T13: 0.0053 T23: 0.0132 REMARK 3 L TENSOR REMARK 3 L11: 1.0708 L22: 2.2468 REMARK 3 L33: 1.6141 L12: -0.8926 REMARK 3 L13: 0.2675 L23: -0.1112 REMARK 3 S TENSOR REMARK 3 S11: 0.0452 S12: 0.0916 S13: 0.0926 REMARK 3 S21: -0.0549 S22: -0.0406 S23: -0.0344 REMARK 3 S31: -0.0074 S32: -0.0075 S33: -0.0047 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 35 A 77 REMARK 3 ORIGIN FOR THE GROUP (A): -18.0000 14.0840 -11.1380 REMARK 3 T TENSOR REMARK 3 T11: 0.1005 T22: 0.0929 REMARK 3 T33: 0.0227 T12: 0.0257 REMARK 3 T13: 0.0060 T23: 0.0098 REMARK 3 L TENSOR REMARK 3 L11: 0.9627 L22: 0.5394 REMARK 3 L33: 1.8608 L12: -0.3917 REMARK 3 L13: 0.3430 L23: -0.2747 REMARK 3 S TENSOR REMARK 3 S11: 0.0063 S12: -0.0098 S13: 0.0813 REMARK 3 S21: 0.0234 S22: 0.0185 S23: -0.0203 REMARK 3 S31: 0.0306 S32: -0.1740 S33: -0.0249 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 78 A 101 REMARK 3 ORIGIN FOR THE GROUP (A): -8.0980 17.9690 -12.1730 REMARK 3 T TENSOR REMARK 3 T11: 0.0929 T22: 0.0658 REMARK 3 T33: 0.0379 T12: 0.0141 REMARK 3 T13: 0.0058 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 0.8646 L22: 1.0553 REMARK 3 L33: 1.4996 L12: -0.2454 REMARK 3 L13: 0.1421 L23: 0.1264 REMARK 3 S TENSOR REMARK 3 S11: -0.0079 S12: 0.0479 S13: 0.0941 REMARK 3 S21: 0.0301 S22: 0.0273 S23: -0.1693 REMARK 3 S31: -0.0825 S32: 0.0818 S33: -0.0193 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 102 A 109 REMARK 3 ORIGIN FOR THE GROUP (A): -16.0740 18.4330 3.3060 REMARK 3 T TENSOR REMARK 3 T11: 0.2056 T22: 0.1120 REMARK 3 T33: 0.0368 T12: 0.0873 REMARK 3 T13: 0.0265 T23: -0.0206 REMARK 3 L TENSOR REMARK 3 L11: 6.9806 L22: 8.4425 REMARK 3 L33: 14.0404 L12: 2.3066 REMARK 3 L13: -6.4161 L23: -5.6093 REMARK 3 S TENSOR REMARK 3 S11: 0.3831 S12: -0.1419 S13: 0.3324 REMARK 3 S21: 0.4828 S22: 0.0402 S23: 0.2367 REMARK 3 S31: -0.8687 S32: -0.1853 S33: -0.4234 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 110 A 139 REMARK 3 ORIGIN FOR THE GROUP (A): -4.1400 6.8850 -5.2790 REMARK 3 T TENSOR REMARK 3 T11: 0.1174 T22: 0.0633 REMARK 3 T33: 0.0225 T12: 0.0255 REMARK 3 T13: -0.0037 T23: 0.0017 REMARK 3 L TENSOR REMARK 3 L11: 1.0893 L22: 1.1065 REMARK 3 L33: 1.2047 L12: -0.5201 REMARK 3 L13: -0.4433 L23: 0.8831 REMARK 3 S TENSOR REMARK 3 S11: 0.0056 S12: -0.0698 S13: 0.0766 REMARK 3 S21: 0.0181 S22: 0.0779 S23: -0.1135 REMARK 3 S31: -0.0975 S32: -0.0350 S33: -0.0836 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 140 A 159 REMARK 3 ORIGIN FOR THE GROUP (A): -7.9020 -0.5240 -9.7670 REMARK 3 T TENSOR REMARK 3 T11: 0.1167 T22: 0.0645 REMARK 3 T33: 0.0385 T12: 0.0083 REMARK 3 T13: -0.0083 T23: 0.0105 REMARK 3 L TENSOR REMARK 3 L11: 0.9404 L22: 2.8766 REMARK 3 L33: 3.7026 L12: 0.3275 REMARK 3 L13: 0.8130 L23: 2.5379 REMARK 3 S TENSOR REMARK 3 S11: -0.0085 S12: -0.0820 S13: -0.0789 REMARK 3 S21: -0.0524 S22: 0.0664 S23: 0.0686 REMARK 3 S31: -0.0407 S32: -0.0898 S33: -0.0578 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4KOY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000079611. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9787 REMARK 200 MONOCHROMATOR : DIAMOND 111 REMARK 200 OPTICS : BERYLLIUM LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34920 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.04500 REMARK 200 R SYM (I) : 0.04500 REMARK 200 FOR THE DATA SET : 39.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.54800 REMARK 200 R SYM FOR SHELL (I) : 0.54800 REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000 MOLREP REMARK 200 STARTING MODEL: 2I6C REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M AMMONIUM SULFATE, 0.1M BIS-TRIS PH REMARK 280 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 29.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.02950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.02950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -153.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 420 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 PRO A 160 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 2 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 30 70.45 -162.79 REMARK 500 ASP A 74 -84.00 -131.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 CSC A 214 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 215 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 5 NE2 REMARK 620 2 HOH A 435 O 104.8 REMARK 620 3 HOH A 516 O 94.5 142.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 216 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 57 NE2 REMARK 620 2 HOH A 462 O 99.4 REMARK 620 3 HOH A 463 O 157.5 102.0 REMARK 620 4 HOH A 463 O 168.1 74.3 32.6 REMARK 620 5 HOH A 490 O 98.6 92.1 87.4 71.9 REMARK 620 6 HOH A 529 O 95.8 126.9 65.7 96.1 135.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 217 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 142 NE2 REMARK 620 2 HOH A 429 O 107.1 REMARK 620 3 HOH A 456 O 94.2 158.2 REMARK 620 4 HOH A 507 O 89.7 108.4 75.8 REMARK 620 5 HOH A 517 O 118.8 77.6 88.1 148.4 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 209 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 210 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 211 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 212 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 213 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CSC A 214 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 215 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 216 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 217 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3PGP RELATED DB: PDB REMARK 900 IN COMPLEX WITH ACCOA REMARK 900 RELATED ID: 4KLV RELATED DB: PDB REMARK 900 IN COMPLEX WITH 4-METHYLUMBELLIFERYL PHOSPHATE REMARK 900 RELATED ID: 4KLW RELATED DB: PDB REMARK 900 IN COMPLEX WITH 2-(AMINOCARBONYL)BENZOATE REMARK 900 RELATED ID: 4KOR RELATED DB: PDB REMARK 900 IN COMPLEX WITH 7-AMINOCEPHALOSPORANIC ACID REMARK 900 RELATED ID: 4KOS RELATED DB: PDB REMARK 900 IN COMPLEX WITH CEFMETAZOLE REMARK 900 RELATED ID: 4KOT RELATED DB: PDB REMARK 900 IN COMPLEX WITH CEFOTAXIME REMARK 900 RELATED ID: 4KOU RELATED DB: PDB REMARK 900 IN COMPLEX WITH CEFIXIME REMARK 900 RELATED ID: 4KOV RELATED DB: PDB REMARK 900 IN COMPLEX WITH CEFUROXIME REMARK 900 RELATED ID: 4KOW RELATED DB: PDB REMARK 900 IN COMPLEX WITH CEFOXITIN REMARK 900 RELATED ID: 4KOX RELATED DB: PDB REMARK 900 IN COMPLEX WITH CEFALOTIN REMARK 900 RELATED ID: 4KUA RELATED DB: PDB REMARK 900 APO FORM REMARK 900 RELATED ID: 4KUB RELATED DB: PDB REMARK 900 IN COMPLEX WITH COA REMARK 900 RELATED ID: MCSG-APC102304 RELATED DB: TARGETTRACK DBREF 4KOY A 1 160 UNP Q9HV14 Q9HV14_PSEAE 1 160 SEQADV 4KOY GLY A -1 UNP Q9HV14 EXPRESSION TAG SEQADV 4KOY HIS A 0 UNP Q9HV14 EXPRESSION TAG SEQRES 1 A 162 GLY HIS MET GLN LEU SER HIS ARG PRO ALA GLU THR GLY SEQRES 2 A 162 ASP LEU GLU THR VAL ALA GLY PHE PRO GLN ASP ARG ASP SEQRES 3 A 162 GLU LEU PHE TYR CYS TYR PRO LYS ALA ILE TRP PRO PHE SEQRES 4 A 162 SER VAL ALA GLN LEU ALA ALA ALA ILE ALA GLU ARG ARG SEQRES 5 A 162 GLY SER THR VAL ALA VAL HIS ASP GLY GLN VAL LEU GLY SEQRES 6 A 162 PHE ALA ASN PHE TYR GLN TRP GLN HIS GLY ASP PHE CYS SEQRES 7 A 162 ALA LEU GLY ASN MET MET VAL ALA PRO ALA ALA ARG GLY SEQRES 8 A 162 LEU GLY VAL ALA ARG TYR LEU ILE GLY VAL MET GLU ASN SEQRES 9 A 162 LEU ALA ARG GLU GLN TYR LYS ALA ARG LEU MET LYS ILE SEQRES 10 A 162 SER CYS PHE ASN ALA ASN ALA ALA GLY LEU LEU LEU TYR SEQRES 11 A 162 THR GLN LEU GLY TYR GLN PRO ARG ALA ILE ALA GLU ARG SEQRES 12 A 162 HIS ASP PRO ASP GLY ARG ARG VAL ALA LEU ILE GLN MET SEQRES 13 A 162 ASP LYS PRO LEU GLU PRO HET SO4 A 201 5 HET SO4 A 202 5 HET EDO A 203 4 HET EDO A 204 4 HET EDO A 205 4 HET EDO A 206 4 HET EDO A 207 8 HET EDO A 208 4 HET EDO A 209 4 HET EDO A 210 4 HET EDO A 211 4 HET EDO A 212 4 HET EDO A 213 8 HET CSC A 214 21 HET ZN A 215 2 HET ZN A 216 1 HET ZN A 217 1 HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM CSC 4-(3-ACETOXYMETHYL-2-CARBOXY-8-OXO-5-THIA-1-AZA- HETNAM 2 CSC BICYCLO[4.2.0]OCT-2-EN-7-YLCARBAMOYL)-1-CARBOXY-BUTYL- HETNAM 3 CSC AMMONIUM HETNAM ZN ZINC ION HETSYN EDO ETHYLENE GLYCOL HETSYN CSC CEPHALOSPORIN C FORMUL 2 SO4 2(O4 S 2-) FORMUL 4 EDO 11(C2 H6 O2) FORMUL 15 CSC C16 H22 N3 O8 S 1+ FORMUL 16 ZN 3(ZN 2+) FORMUL 19 HOH *229(H2 O) HELIX 1 1 GLU A 9 GLY A 11 5 3 HELIX 2 2 ASP A 12 GLY A 18 1 7 HELIX 3 3 ASP A 22 TYR A 30 1 9 HELIX 4 4 SER A 38 ARG A 49 1 12 HELIX 5 5 PRO A 85 ARG A 88 5 4 HELIX 6 6 GLY A 91 LYS A 109 1 19 HELIX 7 7 ASN A 121 LEU A 131 1 11 SHEET 1 A 7 SER A 4 PRO A 7 0 SHEET 2 A 7 ARG A 50 HIS A 57 -1 O VAL A 56 N SER A 4 SHEET 3 A 7 GLN A 60 GLN A 71 -1 O LEU A 62 N ALA A 55 SHEET 4 A 7 PHE A 75 VAL A 83 -1 O GLY A 79 N ASN A 66 SHEET 5 A 7 LEU A 112 PHE A 118 1 O LYS A 114 N CYS A 76 SHEET 6 A 7 ARG A 148 PRO A 157 -1 O ILE A 152 N CYS A 117 SHEET 7 A 7 GLN A 134 HIS A 142 -1 N ARG A 136 O GLN A 153 LINK NE2AHIS A 5 ZN A ZN A 215 1555 1555 2.03 LINK NE2BHIS A 5 ZN B ZN A 215 1555 1555 2.20 LINK NE2 HIS A 57 ZN ZN A 216 1555 1555 2.10 LINK NE2BHIS A 142 ZN B ZN A 217 1555 1555 1.98 LINK ZN A ZN A 215 O HOH A 435 1555 1555 2.66 LINK ZN A ZN A 215 O HOH A 516 1555 1555 2.48 LINK ZN ZN A 216 O HOH A 462 1555 1555 2.09 LINK ZN ZN A 216 O AHOH A 463 1555 1555 2.33 LINK ZN ZN A 216 O BHOH A 463 1555 1555 2.39 LINK ZN ZN A 216 O HOH A 490 1555 1555 2.20 LINK ZN ZN A 216 O HOH A 529 1555 1555 1.92 LINK ZN B ZN A 217 O HOH A 429 1555 1555 1.91 LINK ZN B ZN A 217 O BHOH A 456 1555 1555 2.05 LINK ZN B ZN A 217 O BHOH A 507 1555 1555 2.11 LINK ZN B ZN A 217 O HOH A 517 1555 1555 2.34 CISPEP 1 TRP A 35 PRO A 36 0 1.78 SITE 1 AC1 11 GLY A 89 LEU A 90 GLY A 91 VAL A 92 SITE 2 AC1 11 ALA A 93 ARG A 94 LEU A 127 HOH A 310 SITE 3 AC1 11 HOH A 330 HOH A 400 HOH A 453 SITE 1 AC2 4 ARG A 50 GLY A 51 HOH A 323 HOH A 390 SITE 1 AC3 4 ARG A 23 ASP A 24 ASP A 143 HOH A 354 SITE 1 AC4 7 GLU A 25 CYS A 29 MET A 82 VAL A 83 SITE 2 AC4 7 ARG A 88 HOH A 378 HOH A 465 SITE 1 AC5 9 GLU A 14 ALA A 17 GLY A 18 PHE A 37 SITE 2 AC5 9 HIS A 72 LYS A 109 ARG A 111 HOH A 331 SITE 3 AC5 9 HOH A 351 SITE 1 AC6 4 GLN A 69 TRP A 70 GLN A 71 HOH A 417 SITE 1 AC7 3 ARG A 141 HIS A 142 HOH A 405 SITE 1 AC8 3 ARG A 50 TRP A 70 HOH A 522 SITE 1 AC9 6 GLN A 2 SER A 4 VAL A 56 HIS A 57 SITE 2 AC9 6 ASP A 58 HOH A 361 SITE 1 BC1 6 GLY A 18 GLN A 21 ARG A 105 ALA A 110 SITE 2 BC1 6 ARG A 111 HOH A 422 SITE 1 BC2 2 ARG A 141 GLN A 153 SITE 1 BC3 5 ASN A 121 TYR A 128 HOH A 453 HOH A 465 SITE 2 BC3 5 HOH A 478 SITE 1 BC4 5 GLU A 9 THR A 10 HOH A 309 HOH A 334 SITE 2 BC4 5 HOH A 442 SITE 1 BC5 18 TYR A 28 CYS A 29 TYR A 30 PRO A 31 SITE 2 BC5 18 ARG A 49 TYR A 68 GLY A 79 ASN A 80 SITE 3 BC5 18 MET A 81 SER A 116 TYR A 128 ARG A 141 SITE 4 BC5 18 LEU A 151 HOH A 308 HOH A 367 HOH A 410 SITE 5 BC5 18 HOH A 449 HOH A 510 SITE 1 BC6 4 HIS A 5 HOH A 379 HOH A 435 HOH A 516 SITE 1 BC7 5 HIS A 57 HOH A 462 HOH A 463 HOH A 490 SITE 2 BC7 5 HOH A 529 SITE 1 BC8 6 GLU A 140 HIS A 142 HOH A 429 HOH A 456 SITE 2 BC8 6 HOH A 507 HOH A 517 CRYST1 58.000 76.059 39.303 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017241 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013148 0.000000 0.00000 SCALE3 0.000000 0.000000 0.025443 0.00000