HEADER TRANSFERASE 13-MAY-13 4KPC TITLE CRYSTAL STRUCTURE OF THE NUCLEOSIDE DIPHOSPHATE KINASE B FROM TITLE 2 LEISHMANIA BRAZILIENSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOSIDE DIPHOSPHATE KINASE B; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.7.4.6; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEISHMANIA BRAZILIENSIS; SOURCE 3 ORGANISM_TAXID: 5660; SOURCE 4 GENE: LBRM_32_3210; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS NDPK SUPERFAMILY, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR P.S.VIEIRA,P.O.GIUSEPPE,C.R.SANTOS,E.M.F.CUNHA,A.H.C.DE OLIVEIRA, AUTHOR 2 M.T.MURAKAMI REVDAT 3 28-FEB-24 4KPC 1 REMARK SEQADV REVDAT 2 17-JUN-15 4KPC 1 JRNL REVDAT 1 09-JUL-14 4KPC 0 JRNL AUTH P.S.VIEIRA,P.O.DE GIUSEPPE,M.T.MURAKAMI,A.H.DE OLIVEIRA JRNL TITL CRYSTAL STRUCTURE AND BIOPHYSICAL CHARACTERIZATION OF THE JRNL TITL 2 NUCLEOSIDE DIPHOSPHATE KINASE FROM LEISHMANIA BRAZILIENSIS. JRNL REF BMC STRUCT.BIOL. V. 15 2 2015 JRNL REFN ESSN 1472-6807 JRNL PMID 25643978 JRNL DOI 10.1186/S12900-015-0030-8 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.3_928 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.32 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 12544 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1260 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.3287 - 5.6161 1.00 1311 152 0.1958 0.2098 REMARK 3 2 5.6161 - 4.4586 1.00 1271 143 0.1380 0.1887 REMARK 3 3 4.4586 - 3.8953 1.00 1259 140 0.1263 0.1510 REMARK 3 4 3.8953 - 3.5392 1.00 1244 135 0.1498 0.1995 REMARK 3 5 3.5392 - 3.2856 1.00 1252 145 0.1759 0.2511 REMARK 3 6 3.2856 - 3.0919 1.00 1229 138 0.1917 0.2868 REMARK 3 7 3.0919 - 2.9371 1.00 1232 134 0.1917 0.2659 REMARK 3 8 2.9371 - 2.8093 1.00 1254 135 0.2246 0.2757 REMARK 3 9 2.8093 - 2.7011 1.00 1232 138 0.2427 0.3078 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.73 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 48.45 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.740 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 45.89 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2226 REMARK 3 ANGLE : 1.117 3004 REMARK 3 CHIRALITY : 0.061 323 REMARK 3 PLANARITY : 0.007 388 REMARK 3 DIHEDRAL : 13.597 820 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 2:41 ) REMARK 3 ORIGIN FOR THE GROUP (A): 85.755 62.205 78.188 REMARK 3 T TENSOR REMARK 3 T11: 0.3040 T22: 0.2045 REMARK 3 T33: 0.3025 T12: -0.0610 REMARK 3 T13: -0.1492 T23: 0.0100 REMARK 3 L TENSOR REMARK 3 L11: 5.4474 L22: 1.0221 REMARK 3 L33: 4.8344 L12: -0.7544 REMARK 3 L13: 1.0778 L23: 1.8075 REMARK 3 S TENSOR REMARK 3 S11: -0.1517 S12: 0.2673 S13: -0.1752 REMARK 3 S21: -0.4614 S22: 0.0480 S23: 0.2192 REMARK 3 S31: -0.1691 S32: -0.2447 S33: 0.0804 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 42:67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 89.629 57.275 97.342 REMARK 3 T TENSOR REMARK 3 T11: 0.5473 T22: 0.3798 REMARK 3 T33: 0.6240 T12: -0.2355 REMARK 3 T13: -0.0794 T23: -0.0714 REMARK 3 L TENSOR REMARK 3 L11: 3.8242 L22: 9.6047 REMARK 3 L33: 5.9948 L12: -5.4663 REMARK 3 L13: -0.5282 L23: 3.9256 REMARK 3 S TENSOR REMARK 3 S11: -0.1382 S12: 0.1962 S13: 0.2461 REMARK 3 S21: -0.3767 S22: -0.2888 S23: 0.1243 REMARK 3 S31: -0.3163 S32: -0.1543 S33: 0.2469 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 68:141 ) REMARK 3 ORIGIN FOR THE GROUP (A): 89.624 64.729 83.184 REMARK 3 T TENSOR REMARK 3 T11: 0.3200 T22: 0.1858 REMARK 3 T33: 0.2397 T12: -0.0706 REMARK 3 T13: -0.1018 T23: -0.0497 REMARK 3 L TENSOR REMARK 3 L11: 4.0916 L22: 1.4478 REMARK 3 L33: 2.5826 L12: 0.4987 REMARK 3 L13: 0.2788 L23: 0.6034 REMARK 3 S TENSOR REMARK 3 S11: -0.0065 S12: 0.4175 S13: -0.3134 REMARK 3 S21: -0.5084 S22: -0.0063 S23: 0.2020 REMARK 3 S31: 0.2806 S32: -0.2626 S33: 0.0078 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN B AND RESID 2:78 ) REMARK 3 ORIGIN FOR THE GROUP (A): 81.087 50.348 65.009 REMARK 3 T TENSOR REMARK 3 T11: 0.2537 T22: 0.2315 REMARK 3 T33: 0.3777 T12: 0.0113 REMARK 3 T13: -0.1509 T23: 0.0741 REMARK 3 L TENSOR REMARK 3 L11: 2.3872 L22: 1.3035 REMARK 3 L33: 1.8745 L12: -0.3299 REMARK 3 L13: 0.3453 L23: -0.0609 REMARK 3 S TENSOR REMARK 3 S11: 0.1442 S12: 0.0671 S13: 0.0285 REMARK 3 S21: -0.2734 S22: 0.0368 S23: 0.5373 REMARK 3 S31: -0.1759 S32: -0.3824 S33: -0.1654 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN B AND RESID 79:139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 74.078 49.630 64.794 REMARK 3 T TENSOR REMARK 3 T11: 0.1072 T22: 0.1758 REMARK 3 T33: 0.2692 T12: 0.0757 REMARK 3 T13: -0.0627 T23: 0.0337 REMARK 3 L TENSOR REMARK 3 L11: 1.8849 L22: 0.7913 REMARK 3 L33: 1.5797 L12: 0.1576 REMARK 3 L13: 0.5973 L23: 0.1301 REMARK 3 S TENSOR REMARK 3 S11: -0.0424 S12: 0.0330 S13: 0.2047 REMARK 3 S21: -0.1306 S22: -0.0147 S23: 0.4491 REMARK 3 S31: -0.1825 S32: -0.4034 S33: -0.0745 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4KPC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-JUN-13. REMARK 100 THE DEPOSITION ID IS D_1000079625. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : W01B-MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.459 REMARK 200 MONOCHROMATOR : DCM SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12564 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 8.100 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.54800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.78 M SODIUM DI-HYDROGEN PHOSPHATE, 1 REMARK 280 M DI-POTASSIUM HYDROGEN PHOSPHATE, 0.1 M SODIUM ACETATE , PH 4.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 55.14200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.14200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.14200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.14200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 55.14200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 55.14200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 55.14200 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 55.14200 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 55.14200 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 55.14200 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 55.14200 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 55.14200 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 55.14200 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 55.14200 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 55.14200 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 55.14200 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 55.14200 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 55.14200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 SER A 143 REMARK 465 HIS A 144 REMARK 465 SER A 145 REMARK 465 ALA A 146 REMARK 465 CYS A 147 REMARK 465 GLN A 148 REMARK 465 ILE A 149 REMARK 465 TYR A 150 REMARK 465 GLU A 151 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 SER B 140 REMARK 465 TRP B 141 REMARK 465 THR B 142 REMARK 465 SER B 143 REMARK 465 HIS B 144 REMARK 465 SER B 145 REMARK 465 ALA B 146 REMARK 465 CYS B 147 REMARK 465 GLN B 148 REMARK 465 ILE B 149 REMARK 465 TYR B 150 REMARK 465 GLU B 151 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 95 -15.85 -49.46 REMARK 500 VAL A 115 -44.33 68.62 REMARK 500 VAL B 115 -43.78 69.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 201 DBREF 4KPC A 1 151 UNP A4HKT8 A4HKT8_LEIBR 1 151 DBREF 4KPC B 1 151 UNP A4HKT8 A4HKT8_LEIBR 1 151 SEQADV 4KPC MET A -19 UNP A4HKT8 INITIATING METHIONINE SEQADV 4KPC GLY A -18 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC SER A -17 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC SER A -16 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC HIS A -15 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC HIS A -14 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC HIS A -13 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC HIS A -12 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC HIS A -11 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC HIS A -10 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC SER A -9 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC SER A -8 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC GLY A -7 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC LEU A -6 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC VAL A -5 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC PRO A -4 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC ARG A -3 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC GLY A -2 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC SER A -1 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC HIS A 0 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC MET B -19 UNP A4HKT8 INITIATING METHIONINE SEQADV 4KPC GLY B -18 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC SER B -17 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC SER B -16 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC HIS B -15 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC HIS B -14 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC HIS B -13 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC HIS B -12 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC HIS B -11 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC HIS B -10 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC SER B -9 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC SER B -8 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC GLY B -7 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC LEU B -6 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC VAL B -5 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC PRO B -4 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC ARG B -3 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC GLY B -2 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC SER B -1 UNP A4HKT8 EXPRESSION TAG SEQADV 4KPC HIS B 0 UNP A4HKT8 EXPRESSION TAG SEQRES 1 A 171 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 171 LEU VAL PRO ARG GLY SER HIS MET SER SER GLU ARG THR SEQRES 3 A 171 PHE ILE ALA ILE LYS PRO ASP GLY VAL GLN ARG GLY LEU SEQRES 4 A 171 VAL GLY GLU ILE ILE SER ARG PHE GLU ARG LYS GLY PHE SEQRES 5 A 171 LYS LEU VAL ALA LEU LYS MET LEU GLN PRO THR THR GLU SEQRES 6 A 171 GLN ALA GLN GLY HIS TYR LYS ASP LEU ALA SER LYS PRO SEQRES 7 A 171 PHE PHE GLU GLY LEU VAL LYS TYR PHE SER SER GLY PRO SEQRES 8 A 171 ILE VAL CYS MET VAL TRP GLU GLY LYS ASN VAL VAL LYS SEQRES 9 A 171 SER GLY ARG VAL LEU LEU GLY ALA THR ASN PRO ALA ASP SEQRES 10 A 171 SER GLN PRO GLY THR ILE ARG GLY ASP TYR ALA VAL ASP SEQRES 11 A 171 VAL GLY ARG ASN VAL CYS HIS GLY SER ASP SER VAL GLU SEQRES 12 A 171 SER ALA GLN ARG GLU VAL ALA PHE TRP PHE LYS VAL GLU SEQRES 13 A 171 GLU ILE ALA SER TRP THR SER HIS SER ALA CYS GLN ILE SEQRES 14 A 171 TYR GLU SEQRES 1 B 171 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 171 LEU VAL PRO ARG GLY SER HIS MET SER SER GLU ARG THR SEQRES 3 B 171 PHE ILE ALA ILE LYS PRO ASP GLY VAL GLN ARG GLY LEU SEQRES 4 B 171 VAL GLY GLU ILE ILE SER ARG PHE GLU ARG LYS GLY PHE SEQRES 5 B 171 LYS LEU VAL ALA LEU LYS MET LEU GLN PRO THR THR GLU SEQRES 6 B 171 GLN ALA GLN GLY HIS TYR LYS ASP LEU ALA SER LYS PRO SEQRES 7 B 171 PHE PHE GLU GLY LEU VAL LYS TYR PHE SER SER GLY PRO SEQRES 8 B 171 ILE VAL CYS MET VAL TRP GLU GLY LYS ASN VAL VAL LYS SEQRES 9 B 171 SER GLY ARG VAL LEU LEU GLY ALA THR ASN PRO ALA ASP SEQRES 10 B 171 SER GLN PRO GLY THR ILE ARG GLY ASP TYR ALA VAL ASP SEQRES 11 B 171 VAL GLY ARG ASN VAL CYS HIS GLY SER ASP SER VAL GLU SEQRES 12 B 171 SER ALA GLN ARG GLU VAL ALA PHE TRP PHE LYS VAL GLU SEQRES 13 B 171 GLU ILE ALA SER TRP THR SER HIS SER ALA CYS GLN ILE SEQRES 14 B 171 TYR GLU HET PO4 A 201 5 HET PO4 B 201 5 HETNAM PO4 PHOSPHATE ION FORMUL 3 PO4 2(O4 P 3-) FORMUL 5 HOH *55(H2 O) HELIX 1 1 LYS A 11 ARG A 17 1 7 HELIX 2 2 LEU A 19 GLY A 31 1 13 HELIX 3 3 THR A 43 TYR A 51 1 9 HELIX 4 4 LYS A 52 ALA A 55 5 4 HELIX 5 5 PHE A 59 SER A 68 1 10 HELIX 6 6 ASN A 81 GLY A 91 1 11 HELIX 7 7 THR A 102 ALA A 108 1 7 HELIX 8 8 SER A 121 PHE A 133 1 13 HELIX 9 9 LYS A 134 ILE A 138 5 5 HELIX 10 10 LYS B 11 ARG B 17 1 7 HELIX 11 11 LEU B 19 GLY B 31 1 13 HELIX 12 12 THR B 43 TYR B 51 1 9 HELIX 13 13 LYS B 52 ALA B 55 5 4 HELIX 14 14 PHE B 59 SER B 68 1 10 HELIX 15 15 ASN B 81 GLY B 91 1 11 HELIX 16 16 THR B 102 ALA B 108 1 7 HELIX 17 17 SER B 121 PHE B 133 1 13 HELIX 18 18 LYS B 134 ILE B 138 5 5 SHEET 1 A 4 LYS A 33 LEU A 40 0 SHEET 2 A 4 ILE A 72 GLU A 78 -1 O ILE A 72 N LEU A 40 SHEET 3 A 4 ARG A 5 ILE A 10 -1 N ILE A 8 O MET A 75 SHEET 4 A 4 CYS A 116 GLY A 118 -1 O HIS A 117 N ALA A 9 SHEET 1 B 4 LYS B 33 LEU B 40 0 SHEET 2 B 4 ILE B 72 GLU B 78 -1 O ILE B 72 N LEU B 40 SHEET 3 B 4 ARG B 5 ILE B 10 -1 N ILE B 10 O VAL B 73 SHEET 4 B 4 CYS B 116 GLY B 118 -1 O HIS B 117 N ALA B 9 SITE 1 AC1 8 LYS A 11 HIS A 50 THR A 93 ASN A 114 SITE 2 AC1 8 HIS A 117 HOH A 304 HOH A 309 HOH A 327 SITE 1 AC2 6 LYS B 11 HIS B 50 TYR B 51 ASN B 114 SITE 2 AC2 6 HIS B 117 HOH B 315 CRYST1 110.284 110.284 110.284 90.00 90.00 90.00 P 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009067 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009067 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009067 0.00000